View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15401_low_54 (Length: 251)
Name: NF15401_low_54
Description: NF15401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15401_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 55 - 237
Target Start/End: Original strand, 40553261 - 40553443
Alignment:
| Q |
55 |
gctacattttattttgtacttcacccttgacaggtggttaattcagatccaaatacatatgtttgtcatggatgcctttctgttatttacaagatagttc |
154 |
Q |
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| T |
40553261 |
gctacattttaatttgtacttcacccttgacaggtggttaattcagatccaaatacatatgtttgtcatggatgcctttctgttatttacaagatagttc |
40553360 |
T |
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| Q |
155 |
attttagccaatctgataagcttgtagaactgctcgagaacaccaacatttcaaggtgaatcatgcatccttttctggttcat |
237 |
Q |
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| T |
40553361 |
attttagccaatctgataagcttgtagaactgctcgagaacaccaacatttcaaggtgaatcatgcatccttttctggttcat |
40553443 |
T |
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