View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15401_low_67 (Length: 227)
Name: NF15401_low_67
Description: NF15401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15401_low_67 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 48494638 - 48494858
Alignment:
| Q |
1 |
tccaaacctcgtaaatggaaaaaatgtggttgggatgcatgatttcactaagggtggccaaccagattctctacggaagtcgggagattagttatcagta |
100 |
Q |
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| T |
48494638 |
tccaaacctcatgaatggaaaaaatgtggttgggatgcatgatttcactaagggtggccaaccagattctctacggaagtcgggagattagttatcagta |
48494737 |
T |
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| Q |
101 |
aagctcatggatacttttttaccaataacaaagttataaaagacaatttgaattttcctaagtagaatnnnnnnnccaaaagttgttatttcaacaaact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
48494738 |
aagctcatggatacttttttaccaataacaaagttataaaagacaatttgaattttcctaagtagaataaaaaaaccaaaagttgttatttcaacaaact |
48494837 |
T |
|
| Q |
201 |
tatgaattctgatgtgcatgt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
48494838 |
tatgaattctgatgtgcatgt |
48494858 |
T |
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