View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15401_low_71 (Length: 211)
Name: NF15401_low_71
Description: NF15401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15401_low_71 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 41857153 - 41856962
Alignment:
| Q |
1 |
tagaagaaaatccaattgaaaatattctgtatcttttgaattcctagagaaattaaagttccaacaattaccatctagtactatgaaaattgaagatgag |
100 |
Q |
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| T |
41857153 |
tagaagaaaatccaattgaaaatattctgtatcttttgaattcctagagaaattaaagttccaacaattaacatctagtactatgaaaattgaagatgag |
41857054 |
T |
|
| Q |
101 |
atcatgagagactgatactgggagaaagacaaaataatcaaggtttcgcctccatgaatattaaattccttgtgcaccccaacctaagattt |
192 |
Q |
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| T |
41857053 |
atcatgagagactgatactgggagaaagacaaaataatcaaggtttcgcctccatgaatattaaattccttgtgcaccccaacctaagattt |
41856962 |
T |
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