View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15407_low_3 (Length: 609)

Name: NF15407_low_3
Description: NF15407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15407_low_3
NF15407_low_3
[»] chr8 (7 HSPs)
chr8 (42-516)||(27230377-27230845)
chr8 (262-516)||(27183431-27183685)
chr8 (20-223)||(27183687-27183896)
chr8 (179-215)||(13473145-13473181)
chr8 (376-426)||(3368282-3368332)
chr8 (264-305)||(13473224-13473265)
chr8 (268-300)||(12724634-12724666)
[»] chr6 (7 HSPs)
chr6 (264-303)||(25319628-25319667)
chr6 (264-303)||(26149321-26149360)
chr6 (370-427)||(29149185-29149242)
chr6 (268-302)||(32745216-32745250)
chr6 (264-305)||(21378784-21378825)
chr6 (400-428)||(25319782-25319810)
chr6 (400-428)||(26149475-26149503)
[»] scaffold0054 (2 HSPs)
scaffold0054 (264-302)||(40146-40184)
scaffold0054 (268-302)||(33799-33833)
[»] chr5 (9 HSPs)
chr5 (264-305)||(32642640-32642681)
chr5 (378-426)||(30651129-30651177)
chr5 (378-426)||(31777475-31777523)
chr5 (264-308)||(37512595-37512639)
chr5 (250-308)||(42406384-42406442)
chr5 (272-306)||(42414484-42414518)
chr5 (269-307)||(42565299-42565337)
chr5 (268-304)||(40548982-40549018)
chr5 (376-428)||(42630062-42630114)
[»] chr1 (3 HSPs)
chr1 (264-305)||(51875037-51875078)
chr1 (388-422)||(344684-344718)
chr1 (268-305)||(22535517-22535554)
[»] scaffold0129 (2 HSPs)
scaffold0129 (376-424)||(17602-17650)
scaffold0129 (376-424)||(33998-34046)
[»] chr2 (2 HSPs)
chr2 (377-424)||(27724744-27724791)
chr2 (378-424)||(34324900-34324946)
[»] chr7 (3 HSPs)
chr7 (264-305)||(5393750-5393791)
chr7 (268-305)||(5442080-5442117)
chr7 (268-305)||(5451090-5451127)
[»] chr4 (1 HSPs)
chr4 (269-305)||(4877548-4877584)


Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 42 - 516
Target Start/End: Original strand, 27230377 - 27230845
Alignment:
Q  42 tgtgatcatcgctatggacccatttaacaccaccaatctagaaaaagaaggatgatgccaatctattggtgtagtgaaaaacacatcattggccaagtta 141  Q
    |||||||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27230377 tgtgatcatcgctatgaacccatttaacaccgccaatctaaaagaagaacgatgatgccaatctattggtgtagtgaaaaacacatcattggtcaagtta 27230476  T
Q  142 aatgacacaacacaaattgtttcatcatctaaaacccccaaccaatggcacaccccattcaagtacactccagacacagagtctaaacaacgaaagtgag 241  Q
    |||||||||||| || ||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||    
T  27230477 aatgacacaacaaaagttgttccattatctgaaaccgccaaccaatggcacaccccattcaagtacact------ttagagcctaaacaacgaaagtgag 27230570  T
Q  242 gaattagtatatcaaaaataacttttctccaagagttacttcttaggctatatatctcccaaaatgagtcaggtaacatacgtaaatcttctttttgaga 341  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| | |||||||||||  |||     
T  27230571 gaattggtatatcaacaataatttttctccaagagttacttcttaggctatatatctcccagaatgagttaggtagcataggaaaatcttctttccgagg 27230670  T
Q  342 ataatgagttgataaataacgatagcgaacatgccgaataaccttgtagtcgtctctgacatggtcataaccaaatccatgaagacacaaggtaccataa 441  Q
    ||||  |   | || ||| ||||| | |||||| ||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||| | ||||||||||    
T  27230671 ataaatatcaggtatataccgataaccaacatgacgaataagcttgtagtcatctttgacatggtcatatccaaatccatgaagacaaagggtaccataa 27230770  T
Q  442 acatggatattaggtagatgctctacaagaccaggagggatgaccttaacttccccagtaactgggttccaaagt 516  Q
    ||||| ||||||| ||||  ||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||    
T  27230771 acatgaatattagatagacactctacaagaccaggagggattaccttaacttcctgagtaacagggttccaaagt 27230845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 262 - 516
Target Start/End: Complemental strand, 27183685 - 27183431
Alignment:
Q  262 acttttctccaagagttacttcttaggctatatatctcccaaaatgagtcaggtaacatacgtaaatcttctttttgagaataatgagttgataaataac 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||| |||||    
T  27183685 acttttctccaagagttacttcttaggctatatatctcccaaaatgagtcaggtaacatgagtaaatcttcttttcaagaataatgagttgatatataac 27183586  T
Q  362 gatagcgaacatgccgaataaccttgtagtcgtctctgacatggtcataaccaaatccatgaagacacaaggtaccataaacatggatattaggtagatg 461  Q
    ||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27183585 gatattgaacatgccgaataaccttgtagtcatctctgacatggtcataaccaaatccatgaagacacaaggtaccaaaaacatggatattaggtagatg 27183486  T
Q  462 ctctacaagaccaggagggatgaccttaacttccccagtaactgggttccaaagt 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27183485 ctctacaagaccaggagggatgaccttaacttccccagtaactgggttccaaagt 27183431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 27183896 - 27183687
Alignment:
Q  20 aagacttggttgtagaataatctgtgatcatcgctatggacccatttaacaccaccaatctagaaa------aagaaggatgatgccaatctattggtgt 113  Q
    ||||||||||| || | |||||||||||||||| || | |||||||||||||||||||||||||||      ||||| ||||||||| | ||||||||||    
T  27183896 aagacttggttatatagtaatctgtgatcatcgataagaacccatttaacaccaccaatctagaaatagaataagaacgatgatgcctaactattggtgt 27183797  T
Q  114 agtgaaaaacacatcattggccaagttaaatgacacaacacaaattgtttcatcatctaaaacccccaaccaatggcacaccccattcaagtacactcca 213  Q
    ||||||||| |||||||||||||| ||| ||||||||||| || || || |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  27183796 agtgaaaaatacatcattggccaaattatatgacacaacagaagtttttccatcatctgaaacccccaaccaatggcacactccattcaagtacactcca 27183697  T
Q  214 gacacagagt 223  Q
    ||||||||||    
T  27183696 gacacagagt 27183687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 13473145 - 13473181
Alignment:
Q  179 ccaaccaatggcacaccccattcaagtacactccaga 215  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13473145 ccaaccaatggcacaccccattcaagtacacttcaga 13473181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 426
Target Start/End: Original strand, 3368282 - 3368332
Alignment:
Q  376 cgaataaccttgtagtcgtctctgacatggtcataaccaaatccatgaaga 426  Q
    ||||| ||||| ||||| ||||| || ||||||||||||||||||||||||    
T  3368282 cgaattaccttatagtcatctctaacttggtcataaccaaatccatgaaga 3368332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 13473224 - 13473265
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctcccaaaa 305  Q
    ||||||||| |||||||||||||  |||||||||||||||||    
T  13473224 ttttctccacgagttacttcttaaactatatatctcccaaaa 13473265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 12724666 - 12724634
Alignment:
Q  268 ctccaagagttacttcttaggctatatatctcc 300  Q
    ||||||||||||||||| |||||||||||||||    
T  12724666 ctccaagagttacttctgaggctatatatctcc 12724634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000006; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 25319628 - 25319667
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctcccaa 303  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  25319628 ttttctccatgagttacttcttaggctatatatctcccaa 25319667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 26149321 - 26149360
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctcccaa 303  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  26149321 ttttctccatgagttacttcttaggctatatatctcccaa 26149360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 29149185 - 29149242
Alignment:
Q  370 acatgccgaataaccttgtagtcgtctctgacatggtcataaccaaatccatgaagac 427  Q
    ||||||||||| || || ||||||| | | ||||||||||||||||||||||||||||    
T  29149185 acatgccgaatgacattatagtcgtttataacatggtcataaccaaatccatgaagac 29149242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 32745216 - 32745250
Alignment:
Q  268 ctccaagagttacttcttaggctatatatctccca 302  Q
    ||||| |||||||||||||||||||||||||||||    
T  32745216 ctccaggagttacttcttaggctatatatctccca 32745250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 21378784 - 21378825
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctcccaaaa 305  Q
    |||||||||||| |||||||||| | ||||||||||||||||    
T  21378784 ttttctccaagaattacttcttaagttatatatctcccaaaa 21378825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 25319782 - 25319810
Alignment:
Q  400 acatggtcataaccaaatccatgaagaca 428  Q
    |||||||||||||||||||||||||||||    
T  25319782 acatggtcataaccaaatccatgaagaca 25319810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 26149475 - 26149503
Alignment:
Q  400 acatggtcataaccaaatccatgaagaca 428  Q
    |||||||||||||||||||||||||||||    
T  26149475 acatggtcataaccaaatccatgaagaca 26149503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 40146 - 40184
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctccca 302  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  40146 ttttctccacgagttacttcttaggctatatatctccca 40184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 33799 - 33833
Alignment:
Q  268 ctccaagagttacttcttaggctatatatctccca 302  Q
    ||||| |||||||||||||||||||||||||||||    
T  33799 ctccacgagttacttcttaggctatatatctccca 33833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000009; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 32642681 - 32642640
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctcccaaaa 305  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  32642681 ttttctccaagagttacttcttaaactatatatctcccaaaa 32642640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 30651177 - 30651129
Alignment:
Q  378 aataaccttgtagtcgtctctgacatggtcataaccaaatccatgaaga 426  Q
    ||||| ||| ||||| ||||| |||||||||||||||||||||||||||    
T  30651177 aataatcttatagtcatctctaacatggtcataaccaaatccatgaaga 30651129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 31777523 - 31777475
Alignment:
Q  378 aataaccttgtagtcgtctctgacatggtcataaccaaatccatgaaga 426  Q
    ||||| ||| ||||| ||||| |||||||||||||||||||||||||||    
T  31777523 aataatcttatagtcatctctaacatggtcataaccaaatccatgaaga 31777475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 37512639 - 37512595
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctcccaaaatga 308  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||    
T  37512639 ttttctccaagagttgcttcttaggctatatatatcccaacatga 37512595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 42406442 - 42406384
Alignment:
Q  250 atatcaaaaataacttttctccaagagttacttcttaggctatatatctcccaaaatga 308  Q
    ||||||| | ||| ||| ||||||||||| ||||||| ||||||||||||||| |||||    
T  42406442 atatcaatattaattttcctccaagagttgcttcttatgctatatatctcccagaatga 42406384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 306
Target Start/End: Complemental strand, 42414518 - 42414484
Alignment:
Q  272 aagagttacttcttaggctatatatctcccaaaat 306  Q
    ||||||||||||| |||||||||||||||||||||    
T  42414518 aagagttacttctaaggctatatatctcccaaaat 42414484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 42565299 - 42565337
Alignment:
Q  269 tccaagagttacttcttaggctatatatctcccaaaatg 307  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  42565299 tccaagagttgcttcttaggctataaatctcccaaaatg 42565337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 40549018 - 40548982
Alignment:
Q  268 ctccaagagttacttcttaggctatatatctcccaaa 304  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  40549018 ctccacgagttacttcttaggctataaatctcccaaa 40548982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 42630062 - 42630114
Alignment:
Q  376 cgaataaccttgtagtcgtctctgacatggtcataaccaaatccatgaagaca 428  Q
    ||||| || |||||||| ||| | || ||||||||||||||||||||||||||    
T  42630062 cgaatcactttgtagtcatctttaacttggtcataaccaaatccatgaagaca 42630114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 51875037 - 51875078
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctcccaaaa 305  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  51875037 ttttctccaagaattacttcttaagctatatatctcccaaaa 51875078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 344718 - 344684
Alignment:
Q  388 tagtcgtctctgacatggtcataaccaaatccatg 422  Q
    ||||| |||||||||||||||||||||||||||||    
T  344718 tagtcatctctgacatggtcataaccaaatccatg 344684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 22535517 - 22535554
Alignment:
Q  268 ctccaagagttacttcttaggctatatatctcccaaaa 305  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  22535517 ctccaagagttacttctaaggctgtatatctcccaaaa 22535554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 17602 - 17650
Alignment:
Q  376 cgaataaccttgtagtcgtctctgacatggtcataaccaaatccatgaa 424  Q
    ||||| || |||||||| ||||| |||||||||||||||||||||||||    
T  17602 cgaatgactttgtagtcatctctaacatggtcataaccaaatccatgaa 17650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 33998 - 34046
Alignment:
Q  376 cgaataaccttgtagtcgtctctgacatggtcataaccaaatccatgaa 424  Q
    ||||| ||||||||||| ||||| ||||| |||||||||||||||||||    
T  33998 cgaatgaccttgtagtcatctctaacatgctcataaccaaatccatgaa 34046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 424
Target Start/End: Original strand, 27724744 - 27724791
Alignment:
Q  377 gaataaccttgtagtcgtctctgacatggtcataaccaaatccatgaa 424  Q
    |||| ||||||||||| ||||  |||||||||||||||||||||||||    
T  27724744 gaatgaccttgtagtcatctcgaacatggtcataaccaaatccatgaa 27724791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 34324946 - 34324900
Alignment:
Q  378 aataaccttgtagtcgtctctgacatggtcataaccaaatccatgaa 424  Q
    ||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  34324946 aataatcttatagtcatctctaacatggtcataaccaaatccatgaa 34324900  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 5393750 - 5393791
Alignment:
Q  264 ttttctccaagagttacttcttaggctatatatctcccaaaa 305  Q
    ||||||||| |||||||| | |||||||||||||||||||||    
T  5393750 ttttctccatgagttactccgtaggctatatatctcccaaaa 5393791  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 5442117 - 5442080
Alignment:
Q  268 ctccaagagttacttcttaggctatatatctcccaaaa 305  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  5442117 ctccacgagttacttcgtaggctatatatctcccaaaa 5442080  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 5451127 - 5451090
Alignment:
Q  268 ctccaagagttacttcttaggctatatatctcccaaaa 305  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  5451127 ctccacgagttacttcgtaggctatatatctcccaaaa 5451090  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 4877584 - 4877548
Alignment:
Q  269 tccaagagttacttcttaggctatatatctcccaaaa 305  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  4877584 tccaagagttacttcttagactataaatctcccaaaa 4877548  T

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