View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15408_high_21 (Length: 338)
Name: NF15408_high_21
Description: NF15408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15408_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 31008577 - 31008889
Alignment:
| Q |
19 |
ctccacacgcgtgttgagaagatgcgcgttccggttagttggcctgtttaggttactaactccaacttcctcgcggaggaagtggagggttggtttgagg |
118 |
Q |
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| T |
31008577 |
ctccacacgcgtgttgagaagatgcgcgttccggttagttggcctgtttaggttactaactccaacttcctcgcggaggaagtggagggttggtttgagg |
31008676 |
T |
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| Q |
119 |
atatggtttacgtcggtgaagaggaggttaggacagcggaggatgaggccgcgggagtcttccacactggcaaggaggtcagatgcaaggaaggtgaaga |
218 |
Q |
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| T |
31008677 |
atatggtttacgtcggtgaagaggaggttaggacagcggaggatgaggccgtgggagtcttccacactggcgaggaggtcagatgcaaggaaggtgaaga |
31008776 |
T |
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| Q |
219 |
cgggggagagggaggtaggggagatggaggttgtgaagaggtggggagaatggtgtactagccgggggatgtcggcctcggtgaaggagtgggatttgag |
318 |
Q |
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| T |
31008777 |
cgggggagagggaggtaggggagatggaggttgtgaagaggtggggagaatggtgtactagccgggggatgtcggcctcggtgaaggagtgggatttgag |
31008876 |
T |
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| Q |
319 |
gaatgtgatgatg |
331 |
Q |
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| T |
31008877 |
gaatgtgatgatg |
31008889 |
T |
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