View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15408_high_23 (Length: 330)

Name: NF15408_high_23
Description: NF15408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15408_high_23
NF15408_high_23
[»] chr8 (1 HSPs)
chr8 (15-309)||(34473348-34473642)


Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 34473348 - 34473642
Alignment:
Q  15 atgaactgaattatagaagaatagagaaaataaatagtataatatttggaagaaacaaaccagggtctatgagttcactaacaagctgaatctgtatccc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34473348 atgaactgaattatagaagaatagagaaaataaatagtataatatttggaagaaacaaaccagggtctatgagttcactaacaagctgaatctgtatccc 34473447  T
Q  115 ttgaccaacaccattaaagaaatactccaactgatcctcaacctcctcaaccacactacctttcattttctttcttatcatcaccactgctttcacctct 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34473448 ttgaccaacaccattaaagaaatactccaactgatcctcaacctcctcaaccacactacctttcattttctttcttatcatcaccactgctttcacctct 34473547  T
Q  215 atcgttccaccatcgcttctgccatcactcgagctactttgtaacgagccattgctcactttgttgtccaccggagatgaggtcgtagtcttgct 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34473548 atcgttccaccatcgcttctgccatcactcgagctactttgtaacgaaccattgctcactttgttgtccaccggagatgaggtcgtagtcttgct 34473642  T

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