View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15408_high_32 (Length: 266)
Name: NF15408_high_32
Description: NF15408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15408_high_32 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 17395004 - 17394776
Alignment:
| Q |
17 |
caaaggaggacaacttgtggacatttgaggaatttcttgagtatcggaaggaggaagagcttcaccttggtgaatggagaaagaacgatggtaccgcatt |
116 |
Q |
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| T |
17395004 |
caaaggaggacaacttgtggacatttgaggaatttcttaagtgtcggaaggaggaagagcttcaccttggtggatggagaaagaacaatggtaccgcatt |
17394905 |
T |
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| Q |
117 |
ctgcatgaactggagaaaggacggtgttggtgctaccttcaagtgcaggagagagaacaggatctgtgcaatcctgcaagatttgcacctcggaacggag |
216 |
Q |
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| T |
17394904 |
ctgcatgaactggagaaaggacggtgttggtgctaccttcaagtgcaggagagagaacaggatctgtgcgatcctgcaagatttgcacctcggaacggag |
17394805 |
T |
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| Q |
217 |
agccacacgacagcgctggaagtacctac |
245 |
Q |
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|||||| |||||||||||||||||||||| |
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| T |
17394804 |
agccacgcgacagcgctggaagtacctac |
17394776 |
T |
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