View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15408_high_34 (Length: 256)
Name: NF15408_high_34
Description: NF15408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15408_high_34 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 2251333 - 2251572
Alignment:
| Q |
17 |
tacgggtagaggatgaaaatgtacataaaaataaaaggaaaaatgttacaatgatattaggggaagctataatgtttttggccatggtgtgattaattgt |
116 |
Q |
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| T |
2251333 |
tacgggtagaggatgaaaatgtacataaaaataaaaggaaaaatgttacaatgatattgggggaagctataatgtttttggccatggtgtgattaattgt |
2251432 |
T |
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| Q |
117 |
tgatcaagtaacgaatttagaaattgaattgatatataaggagttgtggtgagttataatgtggatatagagaagtactaaatagagaagagttctattt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2251433 |
tgatcaagtaacgaatttagaaattgaattgatatataaggagttgtggtgagttataatgtggatatagagaagtactaaatagagaagagttctattt |
2251532 |
T |
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| Q |
217 |
gggaggttgagcagcaaagaacggaaagatggatggagaa |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
2251533 |
gggaggttgagcagcaaagaacggaaagatggatggagaa |
2251572 |
T |
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