View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15408_low_24 (Length: 335)

Name: NF15408_low_24
Description: NF15408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15408_low_24
NF15408_low_24
[»] chr2 (49 HSPs)
chr2 (12-207)||(22106122-22106324)
chr2 (12-190)||(32214250-32214435)
chr2 (12-189)||(24671682-24671866)
chr2 (12-189)||(6726704-6726888)
chr2 (12-190)||(23932117-23932302)
chr2 (12-189)||(21154136-21154320)
chr2 (17-193)||(45027217-45027400)
chr2 (12-190)||(23706346-23706531)
chr2 (12-189)||(24368483-24368668)
chr2 (12-190)||(24918797-24918982)
chr2 (13-190)||(24528867-24529051)
chr2 (12-189)||(41523202-41523385)
chr2 (12-190)||(24682101-24682278)
chr2 (257-334)||(22106374-22106451)
chr2 (257-334)||(29602207-29602284)
chr2 (84-188)||(24897411-24897523)
chr2 (84-188)||(24899894-24900006)
chr2 (84-188)||(24902371-24902483)
chr2 (84-188)||(24904848-24904960)
chr2 (84-188)||(24907323-24907435)
chr2 (84-190)||(38968314-38968425)
chr2 (69-192)||(18809763-18809893)
chr2 (69-192)||(23711225-23711355)
chr2 (69-192)||(32038709-32038839)
chr2 (69-192)||(39683136-39683266)
chr2 (133-189)||(25616572-25616628)
chr2 (69-192)||(23131682-23131812)
chr2 (69-192)||(23134149-23134279)
chr2 (257-317)||(18240896-18240956)
chr2 (84-193)||(28577939-28578056)
chr2 (69-190)||(34401736-34401864)
chr2 (257-317)||(34858065-34858125)
chr2 (257-317)||(34873127-34873187)
chr2 (69-192)||(26508677-26508807)
chr2 (69-190)||(22695155-22695283)
chr2 (135-189)||(9785535-9785589)
chr2 (69-192)||(26506199-26506329)
chr2 (69-192)||(27919976-27920106)
chr2 (152-192)||(572309-572349)
chr2 (135-203)||(18388177-18388245)
chr2 (84-192)||(23136402-23136518)
chr2 (84-123)||(572232-572271)
chr2 (135-190)||(19358888-19358943)
chr2 (140-207)||(34858175-34858242)
chr2 (140-207)||(34873237-34873304)
chr2 (69-123)||(22690559-22690612)
chr2 (140-190)||(31346121-31346171)
chr2 (259-317)||(34491130-34491188)
chr2 (170-207)||(29602120-29602157)
[»] chr8 (54 HSPs)
chr8 (12-190)||(27471737-27471922)
chr8 (12-190)||(32122385-32122570)
chr8 (12-193)||(19897171-19897359)
chr8 (12-190)||(16412635-16412821)
chr8 (13-190)||(1326445-1326629)
chr8 (12-190)||(24049267-24049452)
chr8 (12-190)||(38549133-38549318)
chr8 (17-190)||(11361179-11361359)
chr8 (12-190)||(15202306-15202491)
chr8 (12-189)||(20403936-20404120)
chr8 (31-190)||(20457354-20457520)
chr8 (12-190)||(37609722-37609907)
chr8 (12-190)||(32810360-32810536)
chr8 (12-105)||(15071217-15071310)
chr8 (257-333)||(23661414-23661490)
chr8 (18-126)||(19936309-19936408)
chr8 (69-192)||(5852505-5852634)
chr8 (84-192)||(24485252-24485368)
chr8 (84-190)||(45289761-45289875)
chr8 (69-192)||(1485222-1485352)
chr8 (69-192)||(4484100-4484230)
chr8 (69-192)||(14408656-14408786)
chr8 (69-192)||(14824596-14824726)
chr8 (69-194)||(20045405-20045537)
chr8 (69-193)||(18677273-18677404)
chr8 (257-322)||(3274004-3274069)
chr8 (257-317)||(12577997-12578057)
chr8 (257-316)||(22236927-22236986)
chr8 (69-189)||(23914804-23914931)
chr8 (86-192)||(22002591-22002705)
chr8 (79-190)||(22252315-22252432)
chr8 (135-190)||(20457989-20458044)
chr8 (91-190)||(21330771-21330876)
chr8 (135-192)||(4541582-4541639)
chr8 (86-190)||(22245237-22245347)
chr8 (257-317)||(41680006-41680066)
chr8 (122-205)||(3273874-3273957)
chr8 (139-190)||(37516608-37516659)
chr8 (135-189)||(25733821-25733875)
chr8 (135-191)||(13660853-13660909)
chr8 (135-191)||(13719496-13719552)
chr8 (163-207)||(23661320-23661364)
chr8 (135-190)||(19928758-19928813)
chr8 (135-190)||(20463192-20463247)
chr8 (140-190)||(14396911-14396961)
chr8 (136-190)||(17460208-17460262)
chr8 (145-190)||(20501230-20501275)
chr8 (122-203)||(22317898-22317979)
chr8 (141-190)||(22996714-22996763)
chr8 (85-118)||(40492106-40492139)
chr8 (85-113)||(2418084-2418112)
chr8 (84-116)||(21979547-21979579)
chr8 (84-116)||(21983032-21983064)
chr8 (84-116)||(21999518-21999550)
[»] chr7 (60 HSPs)
chr7 (12-190)||(45846765-45846950)
chr7 (12-189)||(11973012-11973196)
chr7 (12-190)||(8469199-8469384)
chr7 (12-190)||(14269084-14269269)
chr7 (12-190)||(8941133-8941316)
chr7 (13-183)||(15081169-15081346)
chr7 (12-190)||(16214341-16214526)
chr7 (12-193)||(38897546-38897733)
chr7 (37-190)||(23461633-23461793)
chr7 (30-189)||(21188926-21189092)
chr7 (58-207)||(5294415-5294571)
chr7 (24-193)||(14317513-14317688)
chr7 (58-207)||(5295588-5295744)
chr7 (58-207)||(5296761-5296917)
chr7 (66-193)||(9945007-9945141)
chr7 (257-334)||(5294290-5294367)
chr7 (69-192)||(11392514-11392642)
chr7 (69-192)||(26355192-26355321)
chr7 (69-192)||(26357644-26357773)
chr7 (257-334)||(5295463-5295540)
chr7 (257-334)||(5296636-5296713)
chr7 (79-190)||(14156392-14156510)
chr7 (69-192)||(27217682-27217811)
chr7 (79-190)||(10500735-10500852)
chr7 (69-192)||(457143-457273)
chr7 (69-192)||(15375925-15376055)
chr7 (69-192)||(20384335-20384465)
chr7 (69-193)||(13870166-13870297)
chr7 (69-193)||(18431533-18431664)
chr7 (69-192)||(16410880-16411010)
chr7 (257-317)||(46579632-46579692)
chr7 (69-192)||(16233342-16233473)
chr7 (69-193)||(18628386-18628517)
chr7 (86-192)||(14948331-14948445)
chr7 (69-193)||(18641092-18641223)
chr7 (135-192)||(24703117-24703174)
chr7 (135-192)||(24705564-24705621)
chr7 (86-192)||(41523756-41523870)
chr7 (257-317)||(36685014-36685073)
chr7 (69-189)||(16460036-16460163)
chr7 (84-192)||(32126325-32126441)
chr7 (86-192)||(41526218-41526332)
chr7 (139-190)||(14980670-14980721)
chr7 (139-190)||(15410146-15410197)
chr7 (69-189)||(16580541-16580668)
chr7 (135-189)||(20488333-20488387)
chr7 (139-207)||(19485956-19486024)
chr7 (140-195)||(1856396-1856451)
chr7 (139-190)||(13893447-13893498)
chr7 (140-195)||(13917568-13917623)
chr7 (140-190)||(13648283-13648333)
chr7 (135-181)||(20484972-20485018)
chr7 (140-190)||(42374305-42374355)
chr7 (85-122)||(9176909-9176946)
chr7 (153-190)||(9724802-9724839)
chr7 (122-203)||(15095624-15095705)
chr7 (137-190)||(15203177-15203230)
chr7 (145-190)||(16997099-16997144)
chr7 (140-189)||(25926301-25926350)
chr7 (145-190)||(42462878-42462923)
[»] chr5 (40 HSPs)
chr5 (12-190)||(2153952-2154137)
chr5 (12-189)||(20917168-20917352)
chr5 (12-190)||(17516290-17516476)
chr5 (12-189)||(32028682-32028866)
chr5 (12-190)||(295603-295780)
chr5 (12-190)||(29330639-29330815)
chr5 (73-190)||(24473792-24473916)
chr5 (257-334)||(36315563-36315640)
chr5 (257-334)||(41094673-41094751)
chr5 (12-65)||(20901373-20901426)
chr5 (69-193)||(38620256-38620387)
chr5 (257-317)||(26832740-26832800)
chr5 (139-190)||(20901326-20901377)
chr5 (69-193)||(39245956-39246087)
chr5 (257-317)||(10774537-10774597)
chr5 (86-192)||(42244574-42244688)
chr5 (86-192)||(20909850-20909965)
chr5 (259-317)||(22241788-22241846)
chr5 (259-317)||(22242784-22242842)
chr5 (135-193)||(23065409-23065467)
chr5 (69-192)||(39364204-39364334)
chr5 (135-192)||(29346874-29346931)
chr5 (135-192)||(29349347-29349404)
chr5 (135-192)||(29351820-29351877)
chr5 (257-317)||(22240792-22240852)
chr5 (257-317)||(22243780-22243840)
chr5 (257-317)||(21554174-21554236)
chr5 (135-192)||(263980-264037)
chr5 (96-207)||(41094801-41094919)
chr5 (257-316)||(30616733-30616792)
chr5 (136-190)||(40723460-40723514)
chr5 (139-193)||(40726681-40726735)
chr5 (136-190)||(41860581-41860635)
chr5 (86-192)||(10732149-10732263)
chr5 (163-207)||(36315469-36315513)
chr5 (257-317)||(21556822-21556882)
chr5 (145-190)||(23476411-23476456)
chr5 (135-207)||(10774647-10774719)
chr5 (85-121)||(15797281-15797317)
chr5 (122-190)||(21405628-21405696)
[»] scaffold0149 (2 HSPs)
scaffold0149 (13-190)||(34154-34338)
scaffold0149 (12-118)||(30676-30782)
[»] scaffold0040 (3 HSPs)
scaffold0040 (13-190)||(20502-20686)
scaffold0040 (12-180)||(43396-43570)
scaffold0040 (69-190)||(13033-13161)
[»] scaffold0322 (1 HSPs)
scaffold0322 (12-190)||(18594-18779)
[»] chr6 (47 HSPs)
chr6 (12-190)||(17027864-17028049)
chr6 (12-190)||(31629861-31630046)
chr6 (12-190)||(34963837-34964022)
chr6 (12-190)||(23992886-23993071)
chr6 (12-190)||(18914782-18914966)
chr6 (13-190)||(25535872-25536057)
chr6 (12-189)||(1598906-1599082)
chr6 (12-190)||(19005808-19005990)
chr6 (30-190)||(30676039-30676206)
chr6 (43-193)||(16198293-16198450)
chr6 (42-190)||(25689320-25689475)
chr6 (12-121)||(19847368-19847477)
chr6 (59-190)||(25721009-25721147)
chr6 (92-204)||(25753385-25753504)
chr6 (92-204)||(25755555-25755674)
chr6 (69-192)||(8055851-8055980)
chr6 (69-192)||(22783048-22783178)
chr6 (84-193)||(17882707-17882823)
chr6 (69-193)||(19858133-19858264)
chr6 (69-192)||(2290390-2290520)
chr6 (69-192)||(18333804-18333934)
chr6 (69-192)||(24423367-24423497)
chr6 (69-192)||(26923657-26923787)
chr6 (69-192)||(33865098-33865228)
chr6 (257-317)||(20733117-20733177)
chr6 (257-317)||(28103331-28103391)
chr6 (132-190)||(19003471-19003529)
chr6 (86-192)||(33862633-33862747)
chr6 (92-192)||(18343033-18343141)
chr6 (135-192)||(12743213-12743270)
chr6 (257-317)||(27852325-27852385)
chr6 (135-189)||(2077197-2077251)
chr6 (79-190)||(17229064-17229181)
chr6 (71-190)||(25739249-25739373)
chr6 (84-192)||(1540123-1540239)
chr6 (84-122)||(23527375-23527413)
chr6 (139-192)||(8226738-8226791)
chr6 (257-317)||(27329853-27329914)
chr6 (257-317)||(27390593-27390654)
chr6 (84-190)||(18454067-18454179)
chr6 (139-190)||(23531896-23531947)
chr6 (140-190)||(17201080-17201130)
chr6 (144-190)||(20183726-20183772)
chr6 (144-190)||(22152219-22152265)
chr6 (141-190)||(18895486-18895535)
chr6 (145-190)||(23415908-23415953)
chr6 (122-190)||(19401078-19401146)
[»] chr3 (54 HSPs)
chr3 (12-190)||(20629512-20629697)
chr3 (13-190)||(46822919-46823103)
chr3 (12-189)||(16282079-16282263)
chr3 (12-190)||(24514140-24514325)
chr3 (12-190)||(55318624-55318809)
chr3 (13-189)||(13937295-13937477)
chr3 (12-189)||(38961158-38961343)
chr3 (12-189)||(41124596-41124780)
chr3 (12-189)||(17444084-17444269)
chr3 (12-190)||(10379791-10379981)
chr3 (12-189)||(8899489-8899664)
chr3 (12-105)||(8500177-8500270)
chr3 (13-102)||(53300919-53301008)
chr3 (12-190)||(12119185-12119352)
chr3 (12-105)||(27165909-27166002)
chr3 (260-334)||(44495660-44495734)
chr3 (12-84)||(45220313-45220385)
chr3 (12-79)||(10557565-10557633)
chr3 (257-334)||(1864222-1864300)
chr3 (69-192)||(17463998-17464128)
chr3 (69-192)||(34160146-34160276)
chr3 (132-189)||(13938301-13938358)
chr3 (86-207)||(1864350-1864479)
chr3 (79-190)||(37428549-37428667)
chr3 (69-193)||(15978355-15978486)
chr3 (136-207)||(44495534-44495605)
chr3 (69-192)||(10246934-10247064)
chr3 (69-192)||(55477312-55477442)
chr3 (86-192)||(7780557-7780671)
chr3 (258-315)||(14967287-14967344)
chr3 (69-193)||(15413251-15413382)
chr3 (86-192)||(16453487-16453601)
chr3 (69-193)||(45577652-45577783)
chr3 (257-317)||(15446750-15446811)
chr3 (135-189)||(14671778-14671832)
chr3 (258-316)||(52465257-52465315)
chr3 (135-192)||(13151000-13151057)
chr3 (135-192)||(13153468-13153525)
chr3 (257-317)||(3263837-3263896)
chr3 (71-190)||(16828281-16828405)
chr3 (152-192)||(45606138-45606178)
chr3 (262-317)||(24177607-24177662)
chr3 (84-192)||(28847831-28847947)
chr3 (257-317)||(52988727-52988791)
chr3 (136-190)||(6468348-6468402)
chr3 (132-190)||(14604856-14604914)
chr3 (139-207)||(37641487-37641555)
chr3 (96-190)||(12386280-12386381)
chr3 (139-190)||(22146768-22146819)
chr3 (140-190)||(5224324-5224374)
chr3 (140-190)||(26054435-26054485)
chr3 (69-119)||(45606198-45606247)
chr3 (145-190)||(9578552-9578597)
chr3 (271-334)||(17547316-17547380)
[»] chr1 (42 HSPs)
chr1 (12-190)||(22050350-22050535)
chr1 (12-193)||(9044515-9044703)
chr1 (12-190)||(16274573-16274761)
chr1 (12-180)||(22122344-22122519)
chr1 (12-190)||(29298898-29299083)
chr1 (12-189)||(40129548-40129732)
chr1 (31-189)||(41230941-41231106)
chr1 (12-190)||(43543365-43543545)
chr1 (12-126)||(15859386-15859501)
chr1 (53-189)||(22122168-22122311)
chr1 (12-189)||(31613215-31613389)
chr1 (12-84)||(43630215-43630287)
chr1 (12-84)||(16401578-16401651)
chr1 (84-190)||(51083112-51083226)
chr1 (92-207)||(41373316-41373439)
chr1 (132-190)||(46560072-46560130)
chr1 (257-334)||(23592798-23592877)
chr1 (86-207)||(23592927-23593056)
chr1 (69-192)||(13989686-13989816)
chr1 (257-317)||(12327616-12327676)
chr1 (69-190)||(14237655-14237783)
chr1 (12-79)||(29777397-29777465)
chr1 (69-192)||(21474296-21474426)
chr1 (145-190)||(42314751-42314796)
chr1 (257-317)||(51336605-51336665)
chr1 (69-193)||(16362740-16362871)
chr1 (135-192)||(21922501-21922558)
chr1 (257-314)||(24007101-24007158)
chr1 (151-190)||(34770621-34770660)
chr1 (135-190)||(48444388-48444443)
chr1 (135-193)||(21841664-21841722)
chr1 (79-190)||(21042505-21042622)
chr1 (257-317)||(22145545-22145605)
chr1 (122-190)||(51476977-51477045)
chr1 (135-190)||(22350713-22350768)
chr1 (139-190)||(20030637-20030688)
chr1 (261-300)||(21995554-21995593)
chr1 (136-190)||(20453636-20453690)
chr1 (140-190)||(22130026-22130076)
chr1 (145-190)||(20959036-20959081)
chr1 (145-190)||(45574020-45574065)
chr1 (271-334)||(13527559-13527623)
[»] scaffold0035 (2 HSPs)
scaffold0035 (12-191)||(107132-107318)
scaffold0035 (132-191)||(115760-115819)
[»] scaffold0574 (1 HSPs)
scaffold0574 (12-190)||(7108-7293)
[»] scaffold0001 (3 HSPs)
scaffold0001 (12-190)||(501721-501906)
scaffold0001 (137-190)||(499057-499110)
scaffold0001 (145-190)||(447420-447465)
[»] chr4 (45 HSPs)
chr4 (12-190)||(363030-363215)
chr4 (12-190)||(14970027-14970212)
chr4 (12-193)||(18214521-18214709)
chr4 (12-190)||(3515664-3515849)
chr4 (12-185)||(11773-11953)
chr4 (12-190)||(15489469-15489654)
chr4 (12-190)||(12778196-12778381)
chr4 (12-190)||(14745700-14745881)
chr4 (12-189)||(52313411-52313595)
chr4 (12-190)||(19617395-19617572)
chr4 (12-190)||(52872402-52872578)
chr4 (12-193)||(15354843-15355023)
chr4 (70-190)||(19858327-19858455)
chr4 (257-334)||(19243718-19243795)
chr4 (69-192)||(1836732-1836860)
chr4 (69-207)||(19243523-19243668)
chr4 (12-79)||(19858235-19858302)
chr4 (69-192)||(7640398-7640528)
chr4 (84-192)||(44616125-44616241)
chr4 (69-192)||(15117564-15117694)
chr4 (84-186)||(3485803-3485913)
chr4 (79-190)||(16043892-16044010)
chr4 (86-192)||(50221550-50221664)
chr4 (257-313)||(10057785-10057841)
chr4 (69-193)||(18238823-18238954)
chr4 (69-193)||(44772294-44772425)
chr4 (135-192)||(12032983-12033040)
chr4 (135-192)||(14717932-14717989)
chr4 (135-192)||(29268249-29268306)
chr4 (139-190)||(26014285-26014336)
chr4 (135-189)||(18023006-18023060)
chr4 (84-190)||(25031099-25031214)
chr4 (84-192)||(14873297-14873413)
chr4 (266-317)||(26014420-26014471)
chr4 (139-193)||(22354669-22354723)
chr4 (141-191)||(26790258-26790308)
chr4 (141-190)||(32306152-32306201)
chr4 (153-190)||(13591069-13591106)
chr4 (257-310)||(14187058-14187110)
chr4 (145-190)||(15792701-15792746)
chr4 (145-190)||(26049620-26049665)
chr4 (137-190)||(27996790-27996843)
chr4 (136-189)||(51463031-51463084)
chr4 (271-334)||(12729690-12729754)
chr4 (134-186)||(14651620-14651672)
[»] scaffold0042 (1 HSPs)
scaffold0042 (12-189)||(43169-43353)
[»] scaffold0053 (1 HSPs)
scaffold0053 (12-189)||(60593-60777)
[»] scaffold0711 (1 HSPs)
scaffold0711 (15-190)||(6897-7079)
[»] scaffold0747 (1 HSPs)
scaffold0747 (12-190)||(1365-1550)
[»] scaffold0716 (1 HSPs)
scaffold0716 (12-190)||(5351-5536)
[»] scaffold0023 (2 HSPs)
scaffold0023 (12-190)||(16760-16945)
scaffold0023 (69-192)||(95231-95361)
[»] scaffold0535 (1 HSPs)
scaffold0535 (12-190)||(7441-7626)
[»] scaffold0494 (1 HSPs)
scaffold0494 (12-190)||(36-222)
[»] scaffold0278 (1 HSPs)
scaffold0278 (12-190)||(8589-8774)
[»] scaffold0021 (1 HSPs)
scaffold0021 (13-190)||(484-668)
[»] scaffold0230 (3 HSPs)
scaffold0230 (12-187)||(20527-20709)
scaffold0230 (30-190)||(22700-22867)
scaffold0230 (135-192)||(14843-14900)
[»] scaffold0043 (1 HSPs)
scaffold0043 (15-190)||(10644-10826)
[»] scaffold0317 (1 HSPs)
scaffold0317 (12-190)||(6257-6441)
[»] scaffold0306 (2 HSPs)
scaffold0306 (12-190)||(10660-10844)
scaffold0306 (12-87)||(15568-15643)
[»] scaffold1296 (1 HSPs)
scaffold1296 (12-190)||(1911-2096)
[»] scaffold1792 (1 HSPs)
scaffold1792 (30-190)||(1033-1200)
[»] scaffold0191 (1 HSPs)
scaffold0191 (59-190)||(3524-3662)
[»] scaffold0016 (2 HSPs)
scaffold0016 (64-189)||(184978-185110)
scaffold0016 (153-190)||(118755-118792)
[»] scaffold0151 (1 HSPs)
scaffold0151 (56-190)||(36599-36740)
[»] scaffold0074 (2 HSPs)
scaffold0074 (12-105)||(38261-38354)
scaffold0074 (82-126)||(9044-9088)
[»] scaffold0037 (3 HSPs)
scaffold0037 (257-334)||(83115-83192)
scaffold0037 (257-313)||(81697-81753)
scaffold0037 (145-207)||(83003-83065)
[»] scaffold0254 (3 HSPs)
scaffold0254 (257-334)||(21766-21843)
scaffold0254 (84-207)||(21585-21716)
scaffold0254 (136-192)||(19167-19223)
[»] scaffold0297 (1 HSPs)
scaffold0297 (69-192)||(2916-3044)
[»] scaffold0019 (2 HSPs)
scaffold0019 (81-190)||(21898-22014)
scaffold0019 (86-191)||(158621-158734)
[»] scaffold1439 (2 HSPs)
scaffold1439 (257-334)||(1191-1268)
scaffold1439 (145-207)||(1081-1143)
[»] scaffold0319 (1 HSPs)
scaffold0319 (80-190)||(6046-6163)
[»] scaffold0028 (5 HSPs)
scaffold0028 (84-192)||(135047-135163)
scaffold0028 (84-192)||(137516-137632)
scaffold0028 (84-192)||(139985-140101)
scaffold0028 (84-192)||(142454-142570)
scaffold0028 (84-192)||(144923-145039)
[»] scaffold0031 (1 HSPs)
scaffold0031 (86-192)||(56218-56332)
[»] scaffold0063 (1 HSPs)
scaffold0063 (69-193)||(38949-39080)
[»] scaffold0134 (1 HSPs)
scaffold0134 (69-192)||(38642-38772)
[»] scaffold0323 (1 HSPs)
scaffold0323 (132-189)||(11858-11915)
[»] scaffold0174 (1 HSPs)
scaffold0174 (257-317)||(13756-13816)
[»] scaffold0029 (1 HSPs)
scaffold0029 (69-190)||(12110-12238)
[»] scaffold0695 (1 HSPs)
scaffold0695 (69-193)||(6765-6896)
[»] scaffold0363 (1 HSPs)
scaffold0363 (86-193)||(10082-10197)
[»] scaffold0146 (1 HSPs)
scaffold0146 (69-190)||(22909-23038)
[»] scaffold0145 (2 HSPs)
scaffold0145 (135-193)||(8166-8224)
scaffold0145 (163-192)||(10762-10791)
[»] scaffold0546 (1 HSPs)
scaffold0546 (84-186)||(7871-7981)
[»] scaffold0481 (1 HSPs)
scaffold0481 (135-192)||(23-80)
[»] scaffold0444 (1 HSPs)
scaffold0444 (86-192)||(14230-14344)
[»] scaffold0122 (1 HSPs)
scaffold0122 (135-192)||(33835-33892)
[»] scaffold0109 (2 HSPs)
scaffold0109 (84-186)||(5326-5436)
scaffold0109 (84-190)||(19-133)
[»] scaffold0071 (1 HSPs)
scaffold0071 (257-317)||(15381-15442)
[»] scaffold0044 (1 HSPs)
scaffold0044 (135-192)||(41293-41350)
[»] scaffold0819 (2 HSPs)
scaffold0819 (257-317)||(5485-5545)
scaffold0819 (135-207)||(5363-5435)
[»] scaffold0139 (1 HSPs)
scaffold0139 (257-317)||(23653-23713)
[»] scaffold0104 (2 HSPs)
scaffold0104 (257-317)||(15076-15136)
scaffold0104 (257-317)||(17096-17156)
[»] scaffold0012 (1 HSPs)
scaffold0012 (79-190)||(220334-220449)
[»] scaffold0009 (1 HSPs)
scaffold0009 (79-190)||(191798-191915)
[»] scaffold0359 (1 HSPs)
scaffold0359 (135-190)||(16330-16385)
[»] scaffold0454 (1 HSPs)
scaffold0454 (135-193)||(476-534)
[»] scaffold0686 (1 HSPs)
scaffold0686 (259-308)||(1559-1608)
[»] scaffold0480 (1 HSPs)
scaffold0480 (82-190)||(10273-10387)
[»] scaffold0577 (1 HSPs)
scaffold0577 (257-317)||(9184-9244)
[»] scaffold0107 (1 HSPs)
scaffold0107 (152-192)||(51326-51366)
[»] scaffold0500 (1 HSPs)
scaffold0500 (96-190)||(8346-8447)
[»] scaffold0117 (2 HSPs)
scaffold0117 (139-190)||(40219-40270)
scaffold0117 (140-190)||(42673-42723)
[»] scaffold0780 (2 HSPs)
scaffold0780 (153-190)||(2471-2508)
scaffold0780 (85-126)||(2542-2583)
[»] scaffold0232 (1 HSPs)
scaffold0232 (135-183)||(4222-4270)
[»] scaffold0101 (1 HSPs)
scaffold0101 (132-192)||(474-534)
[»] scaffold0007 (1 HSPs)
scaffold0007 (135-203)||(158809-158877)
[»] scaffold1419 (1 HSPs)
scaffold1419 (91-126)||(903-938)
[»] scaffold0180 (1 HSPs)
scaffold0180 (135-190)||(28329-28384)
[»] scaffold0394 (1 HSPs)
scaffold0394 (136-190)||(13046-13100)
[»] scaffold0290 (1 HSPs)
scaffold0290 (136-190)||(1070-1124)
[»] scaffold0200 (1 HSPs)
scaffold0200 (140-190)||(18595-18645)
[»] scaffold0083 (1 HSPs)
scaffold0083 (136-190)||(42293-42347)
[»] scaffold0014 (1 HSPs)
scaffold0014 (23-84)||(113488-113550)
[»] scaffold0125 (1 HSPs)
scaffold0125 (145-190)||(1051-1096)
[»] scaffold0046 (1 HSPs)
scaffold0046 (149-194)||(16081-16126)
[»] scaffold0022 (1 HSPs)
scaffold0022 (85-122)||(128172-128209)
[»] scaffold0004 (1 HSPs)
scaffold0004 (149-194)||(333248-333293)
[»] scaffold0175 (1 HSPs)
scaffold0175 (122-190)||(8626-8694)
[»] scaffold0010 (1 HSPs)
scaffold0010 (145-189)||(7216-7260)
[»] scaffold0005 (1 HSPs)
scaffold0005 (134-186)||(165620-165672)


Alignment Details
Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 22106122 - 22106324
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22106122 gagatgaaaataaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 22106221  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcgg 204  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22106222 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagaatgaatgatcgg 22106321  T
Q  205 cgg 207  Q
    |||    
T  22106322 cgg 22106324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 32214435 - 32214250
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32214435 gagatgaaaagaaaaatcagaaaaagcaatctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 32214336  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32214335 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 32214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 24671682 - 24671866
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24671682 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 24671781  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||     ||||   |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  24671782 tcaaaaactaaacctacaacatattaaatacaatttttagaatcatagactcaagattattgaatgttagtcccacccttacctt 24671866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 6726704 - 6726888
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6726704 gagatgaaaagaaaaatcagaaaaagcaacctatatttttcaacttcaatttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 6726803  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6726804 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 6726888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 23932117 - 23932302
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  23932117 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaactcatcaaaatcatcactattaaccctaattctcaaattc 23932216  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23932217 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 23932302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 21154320 - 21154136
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21154320 gagatgaaaagaaaaatcagaaaaagcaacccatattattcaacttcactttcattcaaaatcatcacaatcatcgctcttaaccctaattctcaaattc 21154221  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||     ||||   |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  21154220 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccactcttacctt 21154136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 45027400 - 45027217
Alignment:
Q  17 gaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaa 116  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45027400 gaaaaaaaaaatcagaaaaagcaacttatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaa 45027301  T
Q  117 aactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45027300 aactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttataa 45027217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 23706531 - 23706346
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23706531 gagatgaaaagaaaaatcagaaaaagcaacctagattatttaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatta 23706432  T
Q  112 tcaaaaacta-------aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||       ||| || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23706431 tcaaaaactaaacatacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 23706346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 24368483 - 24368668
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24368483 gagatgaaaagaaaaatcagaaaaagcaacttatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 24368582  T
Q  112 tc-aaaaacta-------aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    || ||||||||       ||| || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24368583 tcaaaaaactatacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 24368668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 24918797 - 24918982
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24918797 gagatgaaaagaaaaatccgaaaaggcaacttatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 24918896  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24918897 tcaaaaactaaacctacaacatggtaaatagaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 24918982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 24529051 - 24528867
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 112  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24529051 agatgaaaagaaaaatcagaaaaagcaatctatattatttaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 24528952  T
Q  113 caaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||| ||||||       || ||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  24528951 caaaaagtaaacctacaatatgttaattacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 24528867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 41523385 - 41523202
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41523385 gagatgaaaaaaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 41523286  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||     ||||   ||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||    
T  41523285 tcaaaaactaaacctacaacatattaaatacaattttc-agatcatagactcaagattattgaatgttagcctcacccttacctt 41523202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 24682101 - 24682278
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  |    
T  24682101 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcacttttattcaaaattatcacaatcatcactcttaaccctaattctcaaaaac 24682200  T
Q  112 tcaaaaacta-aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |  ||| ||| ||| || || |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  24682201 t--aaacctacaacatgttaaatacaattttcagaatcatagacttaagattattgaatgttagtcccacccttacctta 24682278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 22106374 - 22106451
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22106374 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 22106451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 29602207 - 29602284
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29602207 caaaaagcagtttcacgtaaaaaagtttctaaacctagttttcttcttatttctctcctcattctatttttcttattt 29602284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 24897523 - 24897411
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||||||||||||||||||||||||    
T  24897523 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagt 24897424  T
Q  176 cccacccttacct 188  Q
    |||||||||||||    
T  24897423 cccacccttacct 24897411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 24900006 - 24899894
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||||||||||||||||||||||||    
T  24900006 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagt 24899907  T
Q  176 cccacccttacct 188  Q
    |||||||||||||    
T  24899906 cccacccttacct 24899894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 24902483 - 24902371
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||||||||||||||||||||||||    
T  24902483 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagt 24902384  T
Q  176 cccacccttacct 188  Q
    |||||||||||||    
T  24902383 cccacccttacct 24902371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 24904960 - 24904848
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||||||||||||||||||||||||    
T  24904960 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagt 24904861  T
Q  176 cccacccttacct 188  Q
    |||||||||||||    
T  24904860 cccacccttacct 24904848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 24907435 - 24907323
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||||||||||||||||||||||||    
T  24907435 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagt 24907336  T
Q  176 cccacccttacct 188  Q
    |||||||||||||    
T  24907335 cccacccttacct 24907323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 38968314 - 38968425
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc-----tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtccc 178  Q
    |||||| ||||||||||||||||||||||||||||||||| |     || || || ||||||| | ||||||||||| ||||||||||||||||||||||    
T  38968314 atcacttttaaccctaattctcaaattctcaaaaactaaaacctacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagtccc 38968413  T
Q  179 acccttacctta 190  Q
    ||||||||||||    
T  38968414 acccttacctta 38968425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 18809763 - 18809893
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  18809763 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 18809861  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  18809862 ttattgaatgttagtcccacccttaccttata 18809893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 23711355 - 23711225
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  23711355 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 23711257  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  23711256 ttattgaatgttagtcccacccttaccttata 23711225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 32038839 - 32038709
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  32038839 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 32038741  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  32038740 ttattgaatgttagtcccacccttaccttata 32038709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 39683136 - 39683266
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  39683136 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattttcagaatcaatgacttaaga 39683234  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  39683235 ttattgaatgttagtcccacccttaccttata 39683266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 25616572 - 25616628
Alignment:
Q  133 tacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25616572 tacaactttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 25616628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 23131682 - 23131812
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||  ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  23131682 aaaatcatca-aataatcacttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 23131780  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  23131781 ttattgaatgttagtcccacccttaccttata 23131812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 23134149 - 23134279
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||  ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  23134149 aaaatcatca-aataatcacttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 23134247  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  23134248 ttattgaatgttagtcccacccttaccttata 23134279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 18240896 - 18240956
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||| ||||||| |||||||||||||||| || ||||||||||||||||    
T  18240896 caaaaagcagtttcacttaaaaacttttctaaacctagtttcctccttatatctctcctca 18240956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 28577939 - 28578056
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| |||||||||||||||||||    
T  28577939 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagt 28578038  T
Q  176 cccacccttaccttataa 193  Q
    || |||||||||||||||    
T  28578039 cctacccttaccttataa 28578056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 34401864 - 34401736
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||  ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  34401864 aaaatcatca-aataatcacttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 34401766  T
Q  161 ttattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||||||||||||||||    
T  34401765 ttattgaatgttagtcccacccttacctta 34401736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 34858125 - 34858065
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||    
T  34858125 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatatctcctca 34858065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 34873187 - 34873127
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||    
T  34873187 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatatctcctca 34873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 26508677 - 26508807
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||||||||||||        ||| || || || |||||| || |||||  |||| ||||    
T  26508677 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaatcaatgacttaaga 26508775  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||| |||||||||||||||    
T  26508776 ttattgaatgttagtctcacccttaccttata 26508807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 22695155 - 22695283
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||| | ||||||||||||| ||||||||||||||||||| |        || || ||  |||||||| |||||  |||| ||||    
T  22695155 aaaatcatca-aataatcatttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatcaaattttcagaatcaatgacttaaga 22695253  T
Q  161 ttattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||||||||||||||||    
T  22695254 ttattgaatgttagtcccacccttacctta 22695283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 9785535 - 9785589
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||||||||||    
T  9785535 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctt 9785589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 26506199 - 26506329
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||||||||||||        ||| || || || |||||| || ||| |  |||| ||||    
T  26506199 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaattaatgacttaaga 26506297  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||| |||||||||||||||    
T  26506298 ttattgaatgttagtctcacccttaccttata 26506329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 27920106 - 27919976
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||||||||||||        ||| || || || |||||| || ||| |  |||| ||||    
T  27920106 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaattaatgacttaaga 27920008  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||| |||||||||||||||    
T  27920007 ttattgaatgttagtctcacccttaccttata 27919976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 572309 - 572349
Alignment:
Q  152 gactcaagattattgaatgttagtcccacccttaccttata 192  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  572309 gacttaagattattgaatgttagtcccacccttaccttata 572349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 18388245 - 18388177
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcg 203  Q
    ||||||||| ||||||| ||||| |||||||||| ||||||| ||||||||||||| | ||| ||||||    
T  18388245 caattttcagaatcatatactcaggattattgaaggttagtctcacccttaccttagattgattgatcg 18388177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 23136402 - 23136518
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||| ||| |        || || || ||||||||| ||||   |||| ||||||||||||| |||||    
T  23136402 atcacttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatattagt 23136501  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  23136502 cccacccttaccttata 23136518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 572232 - 572271
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaa 123  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  572232 atcacttttaaccctaattcccaaattctcaaaaactaaa 572271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 19358888 - 19358943
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||||||| |||||  |||||| || |||||||||||||||||||||    
T  19358888 caattttcagaatcatatactcagaattattaaaggttagtcccacccttacctta 19358943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 34858242 - 34858175
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||| ||||| | |||||| ||||||||| |||||||||||||||||||||  ||  |||||||||||    
T  34858242 ttcagaatcacatactcaaaattattgaaggttagtcccacccttaccttagtattgatgatcggcgg 34858175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 34873304 - 34873237
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||| ||||| | |||||| ||||||||| |||||||||||||||||||||  ||  |||||||||||    
T  34873304 ttcagaatcacatactcaaaattattgaaggttagtcccacccttaccttagtattgatgatcggcgg 34873237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 22690559 - 22690612
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaa 123  Q
    |||||||||| ||| |||| | ||||||||||||| |||||||||||||||||||    
T  22690559 aaaatcatca-aataatcatttttaaccctaattcccaaattctcaaaaactaaa 22690612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 31346121 - 31346171
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||| || ||||  |||||||||||||| |||||||||||||    
T  31346121 ttcaaaatcataggcttaagaagattgaatgttagtctcacccttacctta 31346171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 34491188 - 34491130
Alignment:
Q  259 aaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||| ||||||||||||||||| ||||||||  |||||| || ||| ||||||||||||    
T  34491188 aaaatcagtttcacgtaaaaacttttctaaatatagtttcctccttttatctctcctca 34491130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 29602120 - 29602157
Alignment:
Q  170 gttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  29602120 gttagtctcacccttaccttagaatgaatgatcggcgg 29602157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 27471922 - 27471737
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471922 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 27471823  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471822 tcaaaaactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 27471737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 32122385 - 32122570
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32122385 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 32122484  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  32122485 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagttccacccttacctta 32122570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 19897171 - 19897359
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  19897171 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcataacaatcatcactcttaactctaattctcaaattc 19897270  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19897271 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttataa 19897359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 16412821 - 16412635
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaa-gcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 110  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16412821 gagatgaaaagaaaaatcagaaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 16412722  T
Q  111 ctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16412721 ctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 16412635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 1326629 - 1326445
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 112  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1326629 agatgaaaagaaaaatcagaaaaagcaacctatattattcaattttactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 1326530  T
Q  113 caaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1326529 caaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 1326445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 24049267 - 24049452
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24049267 gagatgaaaagaaaaatcataaaaaacaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 24049366  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24049367 tcaaaaactaaacctacaacatgttaaatataattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 24049452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 38549318 - 38549133
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  38549318 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcacttttaagcctaattctcaaattc 38549219  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  38549218 tcaaaaactaaacccacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccaacccttacctta 38549133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 11361179 - 11361359
Alignment:
Q  17 gaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaa 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11361179 gaaaaaaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccttaattctcaaattctcaaa 11361278  T
Q  117 aactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||       || || |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  11361279 aactaaacctacaacatgttaaatacaatttttagaatcatagactcaagattattgaatgttagtcccacccttacctta 11361359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 15202491 - 15202306
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  15202491 gagatgaaaagaaaaatcagaaaaagcaacccatattattcaacttcactttcattctaaataatcacaatcatcactcttaaccctaattctcaaattc 15202392  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||     ||||   |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  15202391 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 15202306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 20403936 - 20404120
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20403936 gagatgaaaagaaaaataagaaaaagcaatctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctaaaattc 20404035  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||       || || |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20404036 tcaaaaactaaacctacaacatgttaaatacaattatcagaatcatagactcaagattattgaatgttagtcccacccttacctt 20404120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 20457354 - 20457520
Alignment:
Q  31 gaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc----- 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  20457354 gaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaa 20457453  T
Q  126 --tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
      || || ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  20457454 catgttaaatacaattttcaggatcatagactcaagattattgaatgttagtcccacccttacctta 20457520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 37609907 - 37609722
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  37609907 gagatgaaaagaaaaataagaaaaagcaacctatattattcaacttcactcttattcaaaatcatcacaatcatcacccttaaccctaattctcaaattc 37609808  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  37609807 tcaaaaactaaacctacaacatgttaaatacaatttttagaatcatagactcaagattattgaatgttagtctcacccttacctta 37609722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 32810360 - 32810536
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  32810360 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaa---------aatcatcactcttaaccctaattctcaaattc 32810450  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32810451 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 32810536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 15071217 - 15071310
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctc 105  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  15071217 gagatgaaaagaaaaatcagaaaaagcaacttatattattcaacttcacttttattcaaaatcatcacaatcatcactcttatctctaattctc 15071310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 23661414 - 23661490
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttatt 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23661414 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttatt 23661490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 19936408 - 19936309
Alignment:
Q  18 aaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaa 117  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  19936408 aaaagaaaaatcagaaaaagcaacttatattattcaacttcactttcattcaaaatca---------tcactcttaaccctaattctcaaattctcaaaa 19936318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 5852634 - 5852505
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagat 161  Q
    |||||||||| ||| ||||||  |||||||||||| ||||||||||||||||||||||       | || |||| ||||||| |||||||||||||||||    
T  5852634 aaaatcatca-aataatcacttgtaaccctaattcccaaattctcaaaaactaaacctacaacatgttaaatacgattttcagaatcatagactcaagat 5852536  T
Q  162 tattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||||||||||||||||||    
T  5852535 tattgaatgttagtcccacccttaccttata 5852505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 24485368 - 24485252
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| |||||||||||||  |||||||||||||||||| |        || || |||||||||||| ||||||||||||||||||||| |||||||||    
T  24485368 atcacttttaaccctaattcctaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattaaatgttagt 24485269  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  24485268 cccacccttaccttata 24485252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 190
Target Start/End: Complemental strand, 45289875 - 45289761
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| |||||||||||||||||||||        || || || ||||||| | ||||||||||| |||||||||||||||||||    
T  45289875 atcacttttaaccctaattcccaaattctcaaaaactaaaccctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagt 45289776  T
Q  176 cccacccttacctta 190  Q
    |||||||||||||||    
T  45289775 cccacccttacctta 45289761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 1485222 - 1485352
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  1485222 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 1485320  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  1485321 ttattgaatgttagtcccacccttaccttata 1485352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 4484100 - 4484230
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  4484100 aaaatcatca-aatgatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 4484198  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  4484199 ttattgaatgttagtcccacccttaccttata 4484230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 14408786 - 14408656
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  14408786 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 14408688  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  14408687 ttattgaatgttagtcccacccttaccttata 14408656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 14824596 - 14824726
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  14824596 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 14824694  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  14824695 ttattgaatgttagtcccacccttaccttata 14824726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 20045537 - 20045405
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| |||||| |||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  20045537 aaaatcatca-aataatcacttttaaccctaattcccaaattttcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 20045439  T
Q  161 ttattgaatgttagtcccacccttaccttataat 194  Q
    ||||||||||||||||||||||||||||||||||    
T  20045438 ttattgaatgttagtcccacccttaccttataat 20045405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 18677404 - 18677273
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||| ||| |        || || || ||||||||| |||||  |||| ||||    
T  18677404 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 18677306  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||||||||||||||||||    
T  18677305 ttattgaatgttagtcccacccttaccttataa 18677273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 3274004 - 3274069
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattcta 322  Q
    |||||||||| ||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  3274004 caaaaagcaggttcacatgaaaacttttctaaacctagttttcttcttatatctctcatcattcta 3274069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 12577997 - 12578057
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  12577997 caaagagcagtttcacgtaaaaacttttctaaacccagttttctccttatatctctcctca 12578057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 22236986 - 22236927
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctc 316  Q
    |||||||||||||||||||||||| ||| |||||||||||| || |||||||||||||||    
T  22236986 caaaaagcagtttcacgtaaaaacttttataaacctagtttcctccttatatctctcctc 22236927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 23914804 - 23914931
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctga--------tatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||| | ||||||||||||||||||||||||||||||||| || |        || || ||||||||| |||||  |||| ||||    
T  23914804 aaaatcatca-aataatcaattttaaccctaattctcaaattctcaaaaactaaaacttacaacatattaaatccaattttcagaatcaatgacttaaga 23914902  T
Q  161 ttattgaatgttagtcccacccttacctt 189  Q
    || ||||||||||||||||||||||||||    
T  23914903 tttttgaatgttagtcccacccttacctt 23914931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 22002591 - 22002705
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||| ||| |        || || || ||||||||| |||||  |||| ||||||||||||||||||||     
T  22002591 cacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtct 22002690  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  22002691 cacccttaccttata 22002705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 22252432 - 22252315
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgt 171  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||       || || ||  |||| ||| |||||||| || ||||  |||||||||    
T  22252432 caattatcactcttaaccctaatt-tcaaattctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgt 22252334  T
Q  172 tagtcccacccttacctta 190  Q
    |||||||||||||||||||    
T  22252333 tagtcccacccttacctta 22252315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 20457989 - 20458044
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||    
T  20457989 caattttcaaaatcatatactcaaaattattgaaggttagtctcacccttacctta 20458044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 21330771 - 21330876
Alignment:
Q  91 ttaaccctaattctcaaattctc-aaaaactaaacc------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccaccct 183  Q
    ||||||||||||||||||||||| ||||||||||||      || || || |||||| |||||||||||||| ||||| | |||||| ||||||||||||    
T  21330771 ttaaccctaattctcaaattctccaaaaactaaaccctaacatgttaaatccaattt-caaaatcatagacttaagatcactgaatgatagtcccaccct 21330869  T
Q  184 tacctta 190  Q
    |||||||    
T  21330870 tacctta 21330876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 4541639 - 4541582
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||||    
T  4541639 caattttcagaatcaatgacttaagattattgaatattagtcccacccttaccttata 4541582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 22245347 - 22245237
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtccc 178  Q
    ||||||||||||||||| ||||||||||||||||||||||       || || ||  |||| ||| |||||||| || ||||  ||||||||||||||||    
T  22245347 cactcttaaccctaatt-tcaaattctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtccc 22245249  T
Q  179 acccttacctta 190  Q
    ||||||||||||    
T  22245248 acccttacctta 22245237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 41680066 - 41680006
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    ||||||||| |||||||| ||||| |||||||||||||||| || |||||| |||||||||    
T  41680066 caaaaagcaatttcacgtgaaaacttttctaaacctagtttcctccttatacctctcctca 41680006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 3273874 - 3273957
Alignment:
Q  122 aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggc 205  Q
    |||||| || || ||||||||| ||||||| || ||  |||||| || ||||||||||||||||||||| |||| |||||||||    
T  3273874 aacctgttaaattcaattttcagaatcatatacacataattattaaaggttagtcccacccttaccttagaatggatgatcggc 3273957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 37516608 - 37516659
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||| ||||| | |||||||||||||||| |||||||||||||||||||||    
T  37516608 tttcagaatcacatactcaagattattgaaggttagtcccacccttacctta 37516659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 25733875 - 25733821
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||| |||||  |||  |||||||||||||||||||||||||||||||||    
T  25733875 caattttcagaatcaatgacataagattattgaatgttagtcccacccttacctt 25733821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 13660909 - 13660853
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttat 191  Q
    ||||||||| ||||| | |||||  ||||||||| ||||||||||||||||||||||    
T  13660909 caattttcagaatcacatactcagaattattgaaggttagtcccacccttaccttat 13660853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 13719552 - 13719496
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttat 191  Q
    ||||||||| ||||| | |||||  ||||||||| ||||||||||||||||||||||    
T  13719552 caattttcagaatcacatactcagaattattgaaggttagtcccacccttaccttat 13719496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 23661320 - 23661364
Alignment:
Q  163 attgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||    
T  23661320 attgaatgccagtcccacccttaccttagaatgaatgatcggcgg 23661364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 19928813 - 19928758
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||||| || || ||||||| |||||||||||| |||||||||||||    
T  19928813 caattttcagaatcaaaggcttaagattaatgaatgttagtctcacccttacctta 19928758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 20463192 - 20463247
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  20463192 caattttcagaatcatatactcagaattattgaaggttagtctcacccttacctta 20463247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 14396961 - 14396911
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  14396961 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 14396911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 17460262 - 17460208
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| ||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  17460262 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 17460208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 20501275 - 20501230
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  20501275 aatcataggcttaagaagattgaatgttagtcccacccttacctta 20501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 22317979 - 22317898
Alignment:
Q  122 aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcg 203  Q
    |||||| || || ||||||||| ||||||| ||| |  |||| |||| ||||||||||||||||||||| | ||| ||||||    
T  22317979 aacctgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttagattgattgatcg 22317898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 22996714 - 22996763
Alignment:
Q  141 tcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||| || ||||  |||||||||||||| |||||||||||||    
T  22996714 tcaaaatcataggcttaagaagattgaatgttagtctcacccttacctta 22996763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 40492139 - 40492106
Alignment:
Q  85 tcactcttaaccctaattctcaaattctcaaaaa 118  Q
    ||||||||||||||||||||||||||||| ||||    
T  40492139 tcactcttaaccctaattctcaaattctctaaaa 40492106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 113
Target Start/End: Complemental strand, 2418112 - 2418084
Alignment:
Q  85 tcactcttaaccctaattctcaaattctc 113  Q
    |||||||||||||||||||||||||||||    
T  2418112 tcactcttaaccctaattctcaaattctc 2418084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 21979579 - 21979547
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaa 116  Q
    |||||| ||||||||||||||||||||||||||    
T  21979579 atcacttttaaccctaattctcaaattctcaaa 21979547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 21983064 - 21983032
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaa 116  Q
    |||||| ||||||||||||||||||||||||||    
T  21983064 atcacttttaaccctaattctcaaattctcaaa 21983032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 21999550 - 21999518
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaa 116  Q
    |||||| ||||||||||||||||||||||||||    
T  21999550 atcacttttaaccctaattctcaaattctcaaa 21999518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 4e-78; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 45846950 - 45846765
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45846950 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 45846851  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45846850 tcaaaaactaaacctacaacatgttaaatacaattttcaaaatcagagactcaagattattgaatgttagtcccacccttacctta 45846765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 11973012 - 11973196
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11973012 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 11973111  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11973112 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 11973196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 8469199 - 8469384
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8469199 gagatgaaaagaaaaatcagaaaaagcaacttatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 8469298  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  8469299 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaaaattattgaatgttagtcccacccttacctta 8469384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 14269269 - 14269084
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14269269 gagatgaaaagaaaaatcagaaaaagcaccctatattattcaacttcactttcattcaaaatcatcacaatcatcacccttaaccctaattctcaaattc 14269170  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14269169 tcaaaaactaaacctacagcatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 14269084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 8941133 - 8941316
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8941133 gagatgaaaagaaaaatcagaaa--gcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 8941230  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8941231 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 8941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 15081346 - 15081169
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15081346 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 15081247  T
Q  113 caaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccaccct 183  Q
    |||||||||||||       || || |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  15081246 caaaaactaaacctacaacatgttaaatacaattttaagaatcatagactcaagattattgaatgttagtcccaccct 15081169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 16214341 - 16214526
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16214341 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacatcactttcattcaaaatcatcacaatcatcactcttaaccctgattctcaaattc 16214440  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  16214441 tcaaaaactaaacctacaagatgttaaatacaattttcagaatcatagactcaagattattgaatattaatcccacccttacctta 16214526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 38897733 - 38897546
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38897733 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctgaaattc 38897634  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  38897633 tcaaaaactaaacctacaacttgttaaatacaattttcagaatcatagactcaagattatt-aatgttagtctcacccctaccttataa 38897546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 37 - 190
Target Start/End: Complemental strand, 23461793 - 23461633
Alignment:
Q  37 gcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |    
T  23461793 gcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgtt 23461694  T
Q  130 atatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  23461693 aaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 23461633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 21189092 - 21188926
Alignment:
Q  30 agaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc---- 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||        
T  21189092 agaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcaatcttaaccctaattctcaaattctaaaaaactaaacctaca 21188993  T
Q  126 ---tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
       || || |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  21188992 acatgttaaatacaattttcagaatcatagactcaagattattaaatgttagtcccacccttacctt 21188926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 5294571 - 5294415
Alignment:
Q  58 cactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcat 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || || |||||||||||| ||||||    
T  5294571 cactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcat 5294472  T
Q  151 agactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5294471 agactcaagattattgaatgttagtcccacccttaccttagaatgaatgatcggcgg 5294415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 14317688 - 14317513
Alignment:
Q  24 aaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaa 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  14317688 aaaatcagaaaaaacaacctatattattcaacttcactttcattcaaaatcatcacaatcgtcactcttaa-cctaattctcaaattctcaaaaaataaa 14317590  T
Q  124 cc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||       || || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14317589 cctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttataa 14317513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 5295744 - 5295588
Alignment:
Q  58 cactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcat 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||  ||||||||||| ||||||    
T  5295744 cactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaattacaattttcagaatcat 5295645  T
Q  151 agactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5295644 agactcaagattattgaatgttagtcccacccttaccttagaatgaatgatcggcgg 5295588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 5296917 - 5296761
Alignment:
Q  58 cactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcat 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||  ||||||||||| ||||||    
T  5296917 cactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaattacaattttcagaatcat 5296818  T
Q  151 agactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5296817 agactcaagattattgaatgttagtcccacccttaccttagaatgaatgatcggcgg 5296761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 9945141 - 9945007
Alignment:
Q  66 ttcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || || |||||||||||| ||||||||||||||    
T  9945141 ttcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaa 9945042  T
Q  159 gattattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||| ||||||||||||||||    
T  9945041 gattattgaatgttagtctcacccttaccttataa 9945007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 5294367 - 5294290
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5294367 caaaaagcaatttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 5294290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 11392642 - 11392514
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct------gatatatacaattttcaaaatcatagactcaagatt 162  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||| ||||      | || |||||||||||| ||||||||||||||||||    
T  11392642 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactatacctacaactgttaaatacaattttcagaatcatagactcaagatt 11392544  T
Q  163 attgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||    
T  11392543 attgaatgttagtcccacccttaccttata 11392514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 26355321 - 26355192
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagat 161  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||       | || |||||||||||  |||||||||||||||||    
T  26355321 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagat 26355223  T
Q  162 tattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||||||||||||||||||    
T  26355222 tattgaatgttagtcccacccttaccttata 26355192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 26357773 - 26357644
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagat 161  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||       | || |||||||||||  |||||||||||||||||    
T  26357773 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagat 26357675  T
Q  162 tattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||||||||||||||||||    
T  26357674 tattgaatgttagtcccacccttaccttata 26357644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 5295540 - 5295463
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  5295540 caaaaagcaatttcacgtaaaaacgtttctaaacctaattttcttcatatatctctcctcattctatttttcttattt 5295463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 5296713 - 5296636
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  5296713 caaaaagcaatttcacgtaaaaacgtttctaaacctaattttcttcatatatctctcctcattctatttttcttattt 5296636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 14156510 - 14156392
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagattattgaatgt 171  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||       |  | ||| |||||||| ||||||||||||||||||||||||||     
T  14156510 caattatcactcttaaccctaattctccaattctcaaagactaaacctacaacatgtcaaataaaattttcagaatcatagactcaagattattgaatga 14156411  T
Q  172 tagtcccacccttacctta 190  Q
    |||||||||||||||||||    
T  14156410 tagtcccacccttacctta 14156392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 27217682 - 27217811
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagat 161  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||       | || || ||||||||| |||||  |||| |||||    
T  27217682 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaacctacaacatgttaaatccaattttcagaatcaatgacttaagat 27217780  T
Q  162 tattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||||||||||||||||||    
T  27217781 tattgaatgttagtcccacccttaccttata 27217811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 10500852 - 10500735
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaactaaacctgat------atatacaattttcaaaatcatagactcaagattattgaatgtt 172  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| |       | ||  |||||||| |||||||||||||||||||||||||| |    
T  10500852 caattatcactcttaaccctaattcttcaattctcaaaaactaaacctaaacatgtcaaatgaaattttcagaatcatagactcaagattattgaatgat 10500753  T
Q  173 agtcccacccttacctta 190  Q
    ||||||||||||||||||    
T  10500752 agtcccacccttacctta 10500735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 457143 - 457273
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  457143 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 457241  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  457242 ttattgaatgttagtcccacccttaccttata 457273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 15376055 - 15375925
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  15376055 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 15375957  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  15375956 ttattgaatgttagtcccacccttaccttata 15375925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 20384465 - 20384335
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  20384465 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 20384367  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  20384366 ttattgaatgttagtcccacccttaccttata 20384335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 13870166 - 13870297
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  13870166 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 13870264  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||| ||||||||||||||||||||||    
T  13870265 ttattgaatgctagtcccacccttaccttataa 13870297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 18431533 - 18431664
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||| ||||||||||||||||||||||||||| |        ||  | || ||||||||| |||||  |||| ||||    
T  18431533 aaaatcatca-aataatcacttttaactctaattctcaaattctcaaaaactaaaacctacaacatgtaaaatccaattttcagaatcaatgacttaaga 18431631  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||||||||||||||||||    
T  18431632 ttattgaatgttagtcccacccttaccttataa 18431664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 16410880 - 16411010
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| |||||||||||||  |||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  16410880 aaaatcatca-aataatcacttttaaccctaattccaaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 16410978  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  16410979 ttattgaatgttagtcccacccttaccttata 16411010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 46579692 - 46579632
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| |||||||||||| ||| || ||||||||||||||||    
T  46579692 caaaaagcagtttcacgtaaaaacttttctaaacctaatttcctccttatatctctcctca 46579632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 16233342 - 16233473
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaatttt-caaaatcatagactcaag 159  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||| || |||||  |||| |||    
T  16233342 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttcagaatcaatgacttaag 16233440  T
Q  160 attattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||||||||||||||||||||    
T  16233441 attattgaatgttagtcccacccttaccttata 16233473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 18628386 - 18628517
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||| | ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  18628386 aaaatcatca-aataatcatttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 18628484  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||||||| |||||||||||||||||||    
T  18628485 ttattgaatgttattcccacccttaccttataa 18628517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 14948445 - 14948331
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaa--------cctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||| |||        | || || || ||||||||| |||||  |||| || ||||||||||||||||||    
T  14948445 cacttttaaccctaattctcaaattctcaaaaacgaaaagctacaacatgttaaatccaattttcagaatcaatgacttaatattattgaatgttagtcc 14948346  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  14948345 cacccttaccttata 14948331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 18641092 - 18641223
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaa-cctg----atat---atacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||| | ||||||||||||| ||||||||||||||||||| |||     ||||   || ||||||||| |||||  |||| ||||    
T  18641092 aaaatcatca-aataatcatttttaaccctaattcccaaattctcaaaaactaaaacctacaacatattaaatccaattttcagaatcaatgacttaaga 18641190  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||||||| |||||||||||||||||||    
T  18641191 ttattgaatgttattcccacccttaccttataa 18641223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 24703117 - 24703174
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  24703117 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 24703174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 24705564 - 24705621
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  24705564 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 24705621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 41523756 - 41523870
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| ||||   |||| |||||||||||||||||||||    
T  41523756 cacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 41523855  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  41523856 cacccttaccttata 41523870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 36685073 - 36685014
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||||    
T  36685073 caaaaagcagtttcacgtaaaa-cttttctaaacctagtttcctccttatatctctcctca 36685014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 16460163 - 16460036
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||||||||||||        ||| || || || ||||||||| |||||  |||| ||||    
T  16460163 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 16460065  T
Q  161 ttattgaatgttagtcccacccttacctt 189  Q
    || |||||||||||||| |||||||||||    
T  16460064 ttgttgaatgttagtccaacccttacctt 16460036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 32126325 - 32126441
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||| | |||||  |||| |||||||||||||||| ||    
T  32126325 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcaatgacttaagattattgaatgtttgt 32126424  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  32126425 cccacccttaccttata 32126441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 41526218 - 41526332
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| ||||   |||| |||||||||||||||||||||    
T  41526218 cacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 41526317  T
Q  178 cacccttaccttata 192  Q
    |||||||||| ||||    
T  41526318 cacccttaccgtata 41526332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 14980721 - 14980670
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||| ||||| | |||||||||||||||| |||||||||||||||||||||    
T  14980721 tttcagaatcacatactcaagattattgaaggttagtcccacccttacctta 14980670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 15410197 - 15410146
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||| ||||| | |||||||||||||||| |||||||||||||||||||||    
T  15410197 tttcagaatcacatactcaagattattgaaggttagtcccacccttacctta 15410146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 16580541 - 16580668
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||| ||||||  ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  16580541 aaaatcatca-aataatcacttttaactctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 16580639  T
Q  161 ttattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||||| |||||||||||    
T  16580640 ttattgaatgttagtccaacccttacctt 16580668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 20488333 - 20488387
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||| |||||  |||| |||||||||||||||||||| ||||||||||||    
T  20488333 caattttcagaatcaatgacttaagattattgaatgttagtctcacccttacctt 20488387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 19486024 - 19485956
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    ||||| |||||||| || ||||  ||||||||||||||||||||||||||||  ||  |||||||||||    
T  19486024 tttcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagtattgatgatcggcgg 19485956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 1856451 - 1856396
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatg 195  Q
    |||| |||||||| || ||||  |||||||||||||||||||||||||||| ||||    
T  1856451 ttcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaatg 1856396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 13893447 - 13893498
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||| ||||||||||| ||||| | |||||| |||||||||||||||||||    
T  13893447 tttcagaatcatagacttaagatcactgaatgatagtcccacccttacctta 13893498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 13917623 - 13917568
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatg 195  Q
    |||| |||||||| || ||||  |||||||||||||||||||||||||||| ||||    
T  13917623 ttcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaatg 13917568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 13648283 - 13648333
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  13648283 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 13648333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 20484972 - 20485018
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacc 181  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||    
T  20484972 caattttcagaatcaatgacttaagattattgaatgttagtcccacc 20485018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 42374355 - 42374305
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  42374355 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 42374305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 9176946 - 9176909
Alignment:
Q  85 tcactcttaaccctaattctcaaattctcaaaaactaa 122  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  9176946 tcactcttaaccctaatcctcaaattctctaaaactaa 9176909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 9724839 - 9724802
Alignment:
Q  153 actcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||| || |||||||||||||||||||||    
T  9724839 actcaagattatttaaggttagtcccacccttacctta 9724802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 15095705 - 15095624
Alignment:
Q  122 aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcg 203  Q
    |||||| || || ||||||||| ||||||| ||| |  |||| |||| ||||||||||||||||||||| | ||| ||||||    
T  15095705 aacctgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttagattgattgatcg 15095624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 15203177 - 15203230
Alignment:
Q  137 attttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||| ||||| | |||||  ||||||||| |||||||||||||||||||||    
T  15203177 attttcagaatcacatactcataattattgaaggttagtcccacccttacctta 15203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 16997099 - 16997144
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  16997099 aatcataggcttaagaagattgaatgttagtcccacccttacctta 16997144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 25926350 - 25926301
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||| |||||||| || ||||  |||||||||||||||||||||||||||    
T  25926350 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctt 25926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 42462878 - 42462923
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  42462878 aatcataggcttaagaagattgaatgttagtcccacccttacctta 42462923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 4e-78; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 2154137 - 2153952
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2154137 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 2154038  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2154037 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 2153952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 20917352 - 20917168
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20917352 gagatgaaaagaaaaatcagaaaaagcaacccatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 20917253  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||     ||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20917252 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 20917168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 17516476 - 17516290
Alignment:
Q  12 gagatgaaaagaaaaatcag-aaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 110  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17516476 gagatgaaaagaaaaatcaggaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 17516377  T
Q  111 ctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| ||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17516376 ctcaaaaaataaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 17516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 32028682 - 32028866
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32028682 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcaccactcttaaccctaattctcaaattc 32028781  T
Q  112 tcaaaaacta-------aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||       ||| || || |||||||||||| ||||||| |||||||||||||||||||||||| || |||||||||    
T  32028782 tcaaaaactaaaactacaacatgttaaatacaattttcagaatcataaactcaagattattgaatgttagtctcatccttacctt 32028866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 295780 - 295603
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  295780 gagatgaaaagaaaaatcagaaaaagcaacttatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaaaac 295681  T
Q  112 tcaaaaacta-aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |  ||| ||| ||| |  || |||||||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||    
T  295680 t--aaacctacaacatattaaatacaattttcagaatcatagactaaagattattgaatgttagtctcactcttacctta 295603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 29330639 - 29330815
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||         |||||||||||| |||||||||||||||||||    
T  29330639 gagatgaaaagaaaaatcagaaaaagtaacctatattattcaactttactttcattcaa---------aatcatcactctgaaccctaattctcaaattc 29330729  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29330730 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 29330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 24473792 - 24473916
Alignment:
Q  73 tcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattatt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||       || || |||||||||||| |||||||||||||||||||||    
T  24473792 tcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattatt 24473891  T
Q  166 gaatgttagtcccacccttacctta 190  Q
    ||||||||||| |||||||||||||    
T  24473892 gaatgttagtctcacccttacctta 24473916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 36315563 - 36315640
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36315563 caaaaagcagtttcacgtaaaaaagtttctaaacatagttttcttcttatatctctcctcattttatttttcttattt 36315640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 41094751 - 41094673
Alignment:
Q  257 caaaaagcagtttcacgtaaaaac-gtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  41094751 caaaaagcagtttcacgtaaaaaaagtttctaaacctagttttcttcttatttctatcctcattctatttttcttattt 41094673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 20901426 - 20901373
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttca 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20901426 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttca 20901373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 38620256 - 38620387
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||||||||||        ||| || || || ||||||||| |||||  |||| ||||    
T  38620256 aaaatcatca-aataatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 38620354  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||| ||||||||||||||||    
T  38620355 ttattgaatgttagtctcacccttaccttataa 38620387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 26832740 - 26832800
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  26832740 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctctcctca 26832800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 20901377 - 20901326
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20901377 tttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 20901326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 39245956 - 39246087
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| || |||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  39245956 aaaatcatca-aataatcacttttgaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 39246054  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||||||||||||||||||    
T  39246055 ttattgaatgttagtcccacccttaccttataa 39246087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 10774597 - 10774537
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    ||||||||||| |||||||||||| |||||||||||||||| || ||||||||||||||||    
T  10774597 caaaaagcagtgtcacgtaaaaacttttctaaacctagtttactccttatatctctcctca 10774537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 42244688 - 42244574
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaa-cctg----atat---atacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||| ||| |||     ||||   || ||||||||| |||||  |||| |||||||||||||||||||||    
T  42244688 cacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatattaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 42244589  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  42244588 cacccttaccttata 42244574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 20909850 - 20909965
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaa--------cta-aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtc 176  Q
    |||| ||||||||||||||||||||||||||||        ||| ||| || || || ||||||||| |||||  |||| ||||||||||||||||||||    
T  20909850 cacttttaaccctaattctcaaattctcaaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtc 20909949  T
Q  177 ccacccttaccttata 192  Q
    ||||||||||||||||    
T  20909950 ccacccttaccttata 20909965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 22241846 - 22241788
Alignment:
Q  259 aaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    ||||||||||| |||||||||| |||||||||||||||| || ||||||||||||||||    
T  22241846 aaaagcagttttacgtaaaaacttttctaaacctagtttcctccttatatctctcctca 22241788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 22242842 - 22242784
Alignment:
Q  259 aaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    ||||||||||| |||||||||| |||||||||||||||| || ||||||||||||||||    
T  22242842 aaaagcagttttacgtaaaaacttttctaaacctagtttcctccttatatctctcctca 22242784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 23065409 - 23065467
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||||||||||||||    
T  23065409 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttataa 23065467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 39364204 - 39364334
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||  ||||||||||||||||||| |        || || || ||||||||| |||||  |||| |||     
T  39364204 aaaatcatca-aataatcacttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagg 39364302  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  39364303 ttattgaatgttagtcccacccttaccttata 39364334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 29346874 - 29346931
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  29346874 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 29346931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 29349347 - 29349404
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  29349347 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 29349404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 29351820 - 29351877
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  29351820 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 29351877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 22240852 - 22240792
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| ||| |||| ||||||| || ||||||||||||||||    
T  22240852 caaaaagcagtttcacgtaaaaacttttataaatctagtttcctccttatatctctcctca 22240792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 22243840 - 22243780
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| ||| |||| ||||||| || ||||||||||||||||    
T  22243840 caaaaagcagtttcacgtaaaaacttttataaatctagtttcctccttatatctctcctca 22243780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 21554236 - 21554174
Alignment:
Q  257 caaaaagcagtttcacgtaaaaa--cgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||  | |||||||||||||| |||| ||||||||||||||||    
T  21554236 caaaaagcagtttcacgtaaaaaaacttttctaaacctagtgttctccttatatctctcctca 21554174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 264037 - 263980
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| |||||||||||||||||||| |||||||||||||||    
T  264037 caattttcagaatcaatgacttaagattattgaatgttagtctcacccttaccttata 263980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 41094919 - 41094801
Alignment:
Q  96 cctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacct 188  Q
    |||||||||| ||||||||||||||||||||       | || |||||||| ||| ||| | || || ||||  ||||| |||||||| |||||||||||    
T  41094919 cctaattctccaattctcaaaaactaaacctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttagtctcacccttacct 41094820  T
Q  189 tataatgaatgatcggcgg 207  Q
    || ||||||||||||||||    
T  41094819 tagaatgaatgatcggcgg 41094801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 30616733 - 30616792
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctc 316  Q
    |||||||||||||||||||||| | || |||||| |||||| || |||||||||||||||    
T  30616733 caaaaagcagtttcacgtaaaagctttgctaaacttagtttcctccttatatctctcctc 30616792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 40723514 - 40723460
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||||||| || ||||  ||||||||||||||||||||||||||||    
T  40723514 aattatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 40723460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 40726681 - 40726735
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||| |||||||| || ||||  |||||||||||||||||||||||||||||||    
T  40726681 tttcagaatcataggcttaagaagattgaatgttagtcccacccttaccttataa 40726735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 41860635 - 41860581
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||||||| || ||||  ||||||||||||||||||||||||||||    
T  41860635 aattatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 41860581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 10732263 - 10732149
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||| ||| |        || || ||  |||||||| |||||  |||| | ||||||||||||||||||     
T  10732263 cacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatctaattttcataatcaatgacttaggattattgaatgttagtct 10732164  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  10732163 cacccttaccttata 10732149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 36315469 - 36315513
Alignment:
Q  163 attgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||    
T  36315469 attgaatgctagtctcacccttaccttagaatgaatgatcggcgg 36315513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 21556882 - 21556822
Alignment:
Q  257 caaaaagcagtttcacgtaaaaa-cgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||| |||||||||| | |||||||||||||||| || ||||||||||| ||||    
T  21556882 caaaaagcagtt-cacgtaaaaaacttttctaaacctagtttcctccttatatctcttctca 21556822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 23476411 - 23476456
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  23476411 aatcataggcttaagaagattgaatgttagtcccacccttacctta 23476456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 10774719 - 10774647
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    ||||||||| ||||||| ||| |  |||| |||| |||||||||||||||||||||  ||  |||||||||||    
T  10774719 caattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttagtattgatgatcggcgg 10774647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 15797281 - 15797317
Alignment:
Q  85 tcactcttaaccctaattctcaaattctcaaaaacta 121  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  15797281 tcactcttaacccgaattcttaaattctcaaaaacta 15797317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 21405696 - 21405628
Alignment:
Q  122 aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||| || || ||||||||| ||||||| |||||  |||||| || ||||||| |||||||||||||    
T  21405696 aacctgttaaattcaattttcagaatcatatactcagaattattaaaggttagtctcacccttacctta 21405628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 34154 - 34338
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34154 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 34253  T
Q  113 caaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34254 caaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 34338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 30676 - 30782
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30676 gagatgaaaagaaaaatatgaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 30775  T
Q  112 tcaaaaa 118  Q
    |||||||    
T  30776 tcaaaaa 30782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 147; Significance: 2e-77; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 20502 - 20686
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20502 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 20601  T
Q  113 caaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20602 caaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 20686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 43396 - 43570
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43396 gagatgaaaagaaaaatca-aaaaagcaacccatattattcaactccactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 43494  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccac 180  Q
    |||||||||||||||     ||||   |||||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  43495 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatatacttaagattattgaatgttagtcccac 43570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 13161 - 13033
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| |||| |||||||  ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  13161 aaaatcatca-aataatcacttttaatcctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 13063  T
Q  161 ttattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||||||||||||||||    
T  13062 ttattgaatgttagtcccacccttacctta 13033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 18594 - 18779
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18594 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcagattc 18693  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18694 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 18779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 17028049 - 17027864
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17028049 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcagattc 17027950  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17027949 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 17027864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 31630046 - 31629861
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31630046 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 31629947  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  31629946 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 31629861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 34963837 - 34964022
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34963837 gagatgaaaagaaaaatcagaaaaagcaacatatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 34963936  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34963937 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 34964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 23992886 - 23993071
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23992886 gagatgaaaagaaaaatcagaaaaagcaacctatactattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 23992985  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  23992986 tcaaaaactaaacctacaacatgttaaatacaattttcagaattatagactcaagattattgaatgttagtcccacccttacctta 23993071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 18914782 - 18914966
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18914782 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaacccttattctcaaattc 18914881  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  18914882 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcataga-tcaagattattgaatgttagtcccacccttacctta 18914966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 25535872 - 25536057
Alignment:
Q  13 agatgaaaagaaaaatcagaaaa-agcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25535872 agatgaaaagaaaaatcagaaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccataattctcaaattc 25535971  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25535972 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25536057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 1598906 - 1599082
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |    
T  1598906 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccataattctcaaaaac 1599005  T
Q  112 tcaaaaacta-aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |  ||| ||| ||| || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1599006 t--aaatctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 1599082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 19005808 - 19005990
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  19005808 gagatgaaaagaaaaatcataaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaaaac 19005907  T
Q  112 t----caaaaactaaacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |    | | |||  ||| || || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  19005908 taaacctataacataacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 19005990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 30676206 - 30676039
Alignment:
Q  30 agaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc---- 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||        
T  30676206 agaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaactctaattctcaaattctcaaaaactaaacctaca 30676107  T
Q  126 ---tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
       || || |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||    
T  30676106 acatgttaaatacaattttcagaatcatagactcaagattattgcatgttagtctcacccttacctta 30676039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 16198293 - 16198450
Alignment:
Q  43 tatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatac 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || || ||||    
T  16198293 tatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatac 16198392  T
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16198393 aattttcagaatcatagactcaagattattgaatgttagtcacacccttaccttataa 16198450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 25689320 - 25689475
Alignment:
Q  42 ctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatata 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       || || |||    
T  25689320 ctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaactctaattctcaaattctcaaaaactaaacctacaacatgttaaata 25689419  T
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25689420 caattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 19847477 - 19847368
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19847477 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatgc 19847378  T
Q  112 tcaaaaacta 121  Q
    ||||||||||    
T  19847377 tcaaaaacta 19847368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 25721009 - 25721147
Alignment:
Q  59 actttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcata 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || || |||||||||||| |||||||    
T  25721009 actttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcata 25721108  T
Q  152 gactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25721109 gactcaagattattgaatgttagtcccacccttacctta 25721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 25753385 - 25753504
Alignment:
Q  92 taaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccaccctt 184  Q
    |||||||||||||||||||||||||||||||||||       | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25753385 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 25753484  T
Q  185 accttataatgaatgatcgg 204  Q
    ||||||  || |||||||||    
T  25753485 accttaagattaatgatcgg 25753504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 25755555 - 25755674
Alignment:
Q  92 taaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccaccctt 184  Q
    |||||||||||||||||||||||||||||||||||       | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25755555 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 25755654  T
Q  185 accttataatgaatgatcgg 204  Q
    ||||||  || |||||||||    
T  25755655 accttaagattaatgatcgg 25755674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 8055851 - 8055980
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagat 161  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||       | || |||||||||||  |||||||||||||||||    
T  8055851 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagat 8055949  T
Q  162 tattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||||||||||||||||||    
T  8055950 tattgaatgttagtcccacccttaccttata 8055980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 22783048 - 22783178
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| ||||||||||||||||    
T  22783048 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaaga 22783146  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  22783147 ttattgaatgttagtcccacccttaccttata 22783178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 17882823 - 17882707
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagattattgaatgttagtc 176  Q
    |||||| ||||||||||||| ||||||||||||||||||||||       | || || ||||||||| ||||||||||||||||||||||||||||||||    
T  17882823 atcacttttaaccctaattcccaaattctcaaaaactaaacctacaacatgttaaatgcaattttcagaatcatagactcaagattattgaatgttagtc 17882724  T
Q  177 ccacccttaccttataa 193  Q
     ||||||||||||||||    
T  17882723 tcacccttaccttataa 17882707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 19858264 - 19858133
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctga--------tatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |  |        || || ||||||||| |||||  |||| ||||    
T  19858264 aaaatcatca-aataatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatcttaaatccaattttcagaatcaatgacttaaga 19858166  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||||||||||||||||||    
T  19858165 ttattgaatgttagtcccacccttaccttataa 19858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 2290520 - 2290390
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||||||||||||||||        || || || ||||||||| |||||  |||| ||||    
T  2290520 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaccctacaacatgttaaattcaattttcagaatcaatgacttaaga 2290422  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||| ||||||||||    
T  2290421 ttattgaatgttagtcccacctttaccttata 2290390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 18333934 - 18333804
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  18333934 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 18333836  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  18333835 ttattgaatgttagtcccacccttaccttata 18333804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 24423367 - 24423497
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  24423367 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 24423465  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  24423466 ttattgaatgttagtcccacccttaccttata 24423497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 26923787 - 26923657
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  26923787 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattttcagaatcaatgacttaaga 26923689  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  26923688 ttattgaatgttagtcccacccttaccttata 26923657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 33865098 - 33865228
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  33865098 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 33865196  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  33865197 ttattgaatgttagtcccacccttaccttata 33865228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 20733177 - 20733117
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  20733177 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctctcctca 20733117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 28103391 - 28103331
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  28103391 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctctcctca 28103331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 19003471 - 19003529
Alignment:
Q  132 atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  19003471 atacaattttcagaatcatagactcaagattattgaatgttagtttcacccttacctta 19003529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 33862633 - 33862747
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||| ||| |        || || || ||||||||| |||||  |||| |||||||||||||||||||||    
T  33862633 cacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 33862732  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  33862733 cacccttaccttata 33862747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 18343033 - 18343141
Alignment:
Q  92 taaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccaccct 183  Q
    |||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| |||||||||||||||||||||||||||    
T  18343033 taaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccaccct 18343132  T
Q  184 taccttata 192  Q
    |||||||||    
T  18343133 taccttata 18343141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 12743213 - 12743270
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  12743213 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 12743270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 27852325 - 27852385
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||| ||||||| |||||| ||||||||| || ||||||||||||||||    
T  27852325 caaaaagcagtttcacttaaaaacttttctatacctagtttcctccttatatctctcctca 27852385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 2077197 - 2077251
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||||||||||    
T  2077197 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctt 2077251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 17229181 - 17229064
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgt 171  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||       || || ||  |||| | | |||||||| || ||||  |||||||||    
T  17229181 caattatcactcttaaccctaatt-tcaaattctcaaaaactaaacctacaacatgttaaatctaattattagaatcataggcttaagaagattgaatgt 17229083  T
Q  172 tagtcccacccttacctta 190  Q
    |||||||||||||||||||    
T  17229082 tagtcccacccttacctta 17229064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 25739249 - 25739373
Alignment:
Q  71 aatcatcacaatcatcactcttaaccctaattctcaaattctc-aaaaactaaa-cctgatatatacaat----tttcaaaatcatagactcaagattat 164  Q
    |||||||| ||| |||||| ||||||||||||||||||||||| |||||||||| ||| | || |  |||    ||||| ||||||||||| ||||| |     
T  25739249 aatcatca-aattatcacttttaaccctaattctcaaattctccaaaaactaaaacctaacatgttaaatccaatttcagaatcatagacttaagatcac 25739347  T
Q  165 tgaatgttagtcccacccttacctta 190  Q
    |||||| |||||||||||||||||||    
T  25739348 tgaatgatagtcccacccttacctta 25739373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 1540239 - 1540123
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| |||||||||||||||||        ||| || || || ||||||| | |||||  |||| |||||||||||||||| ||    
T  1540239 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcaatgacttaagattattgaatgtttgt 1540140  T
Q  176 cccacccttaccttata 192  Q
    | |||||||||||||||    
T  1540139 ctcacccttaccttata 1540123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 23527413 - 23527375
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaa 122  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  23527413 atcactcttaaccctaattctcaaatcctcaaaaactaa 23527375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 8226791 - 8226738
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||| |||||||| || ||||  ||||||||||||||||||||||||||||||    
T  8226791 tttcagaatcataggcttaagaagattgaatgttagtcccacccttaccttata 8226738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 27329914 - 27329853
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgt-ttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||    ||||||||||||||| || ||||||||||||||||    
T  27329914 caaaaagcagtttcacgtaaaaaaaaattctaaacctagtttcctccttatatctctcctca 27329853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 27390654 - 27390593
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgt-ttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||    ||||||||||||||| || ||||||||||||||||    
T  27390654 caaaaagcagtttcacgtaaaaaaaaattctaaacctagtttcctccttatatctctcctca 27390593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 18454067 - 18454179
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtc 176  Q
    ||||||||||||||||||| ||||||||||||||| ||||||       || || ||  |||| ||| |||||||  || ||||  ||||||||||||||    
T  18454067 atcactcttaaccctaatt-tcaaattctcaaaaattaaacctacaacatgttaaatctaattatcagaatcatatgcttaagaagattgaatgttagtc 18454165  T
Q  177 ccacccttacctta 190  Q
    ||||||||||||||    
T  18454166 ccacccttacctta 18454179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 23531947 - 23531896
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  23531947 tttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 23531896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 17201130 - 17201080
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  17201130 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 17201080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 20183726 - 20183772
Alignment:
Q  144 aaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||| |||| || |||||| |||||||||||||||||||    
T  20183726 aaatcatagacttaagagtactgaatgatagtcccacccttacctta 20183772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 22152265 - 22152219
Alignment:
Q  144 aaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||| |||| || |||||| |||||||||||||||||||    
T  22152265 aaatcatagacttaagagtactgaatgatagtcccacccttacctta 22152219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 18895535 - 18895486
Alignment:
Q  141 tcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||| || ||||  |||||||||||||| |||||||||||||    
T  18895535 tcaaaatcataggcttaagaaaattgaatgttagtctcacccttacctta 18895486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 23415908 - 23415953
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  23415908 aatcataggcttaagaagattgaatgttagtcccacccttacctta 23415953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 19401078 - 19401146
Alignment:
Q  122 aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||| || || ||||||||| ||||||| ||| |  |||| |||| |||||||||||||||||||||    
T  19401078 aacctgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctta 19401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 20629697 - 20629512
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20629697 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcataaccctaattctcaaattc 20629598  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20629597 tcaaaaactaaacctacaatatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 20629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 46822919 - 46823103
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46822919 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 46823018  T
Q  113 caaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||       || || |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46823019 caaaaactaaacctacaacatgttaaatacgattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 46823103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 16282263 - 16282079
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16282263 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 16282164  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||     ||||   |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  16282163 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctt 16282079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 24514140 - 24514325
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  24514140 gagatgaaaagaaaaatcagaaaaagcaacttatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaatcctaattatcaaattc 24514239  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24514240 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 24514325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 55318809 - 55318624
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55318809 gagatgaaaagaaaaatcagaaaaaataacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 55318710  T
Q  112 tcaaaaacta-------aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||       ||| || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55318709 tcaaaaactaaacttacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 55318624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 13937477 - 13937295
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13937477 agatgaaaagaaaaatcagaaaa-gcaacctatattattcaacttcactttcatccaaaatcatcacaatcatcactcttaaccctaattctcaaattct 13937379  T
Q  113 caaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13937378 caaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 13937295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 38961343 - 38961158
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38961343 gagatgaaaagaaaaatcagaaaaagcaacatatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 38961244  T
Q  112 tca-aaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||| |||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  38961243 tcaaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctt 38961158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 41124596 - 41124780
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41124596 gagataaaaagaaaaataaaaaaaaacaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 41124695  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41124696 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 41124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 17444269 - 17444084
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaa-gcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 110  Q
    ||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17444269 gagatgaaaagaaaaataaaaaaaaagcaacccatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattcttaaatt 17444170  T
Q  111 ctcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||||     ||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17444169 ctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 17444084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 10379791 - 10379981
Alignment:
Q  12 gagatgaaaagaaaaatcagaa-----aaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctca 106  Q
    ||||||||||||||||||||||     |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10379791 gagatgaaaagaaaaatcagaagaaaaaaaaaaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctca 10379890  T
Q  107 aattctcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||| ||     ||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10379891 aattctcaaaaactaaatctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 10379981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 8899489 - 8899664
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  8899489 gagatgaaaagaaaaattagaaaaagcaacccatattattcaacttcactttcattcaa---------aatcatcactcttaaccctaattctcaaattc 8899579  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||       |  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  8899580 tcaaaaactaaacctacaacatattatatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctt 8899664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 8500177 - 8500270
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8500177 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctc 8500270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 53301008 - 53300919
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53301008 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcacttttattcaaaatcatcacaatcatcactcttaaccctaatt 53300919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 12119352 - 12119185
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||||         ||| ||||||||||||||||||||||||||||||||    
T  12119352 gagatgaaaagaaaaatcagaaaaagcaacctatattatt---------tttcat---------tcagaatcatcactcttaaccctaattctcaaattc 12119271  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12119270 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 12119185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 27165909 - 27166002
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctc 105  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27165909 gagatgaaaagaaaaattagaaaaagcaatctatactattcaacttcacttttattcaaaatcatcacaatcatcactcttaaccctaattctc 27166002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 44495660 - 44495734
Alignment:
Q  260 aaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44495660 aaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 44495734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 45220385 - 45220313
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatca 84  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  45220385 gagatgaaaagaaaaataagaaaaagcaacctatattatttaacttcactttcattcaaaatcatcataatca 45220313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 10557565 - 10557633
Alignment:
Q  12 gagatgaaaagaaaaa-tcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcac 79  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10557565 gagatgaaaagaaaaaataagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcac 10557633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 1864300 - 1864222
Alignment:
Q  257 caaaaagcagtttcacgtaaaaac-gtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||| |||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  1864300 caaaaagcaatttcacgtaaaaaaagtttctaaacatagttttcttcttatatctctcctcattttatttttcttattt 1864222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 17463998 - 17464128
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  17463998 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 17464096  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  17464097 ttattgaatgttagtcccacccttaccttata 17464128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 34160146 - 34160276
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  34160146 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 34160244  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  34160245 ttattgaatgttagtcccacccttaccttata 34160276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 13938358 - 13938301
Alignment:
Q  132 atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  13938358 atacaattttcagaatcatagactcaagattattgaatgttattcccacccttacctt 13938301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 1864479 - 1864350
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||| ||||||||||||||||||| |        || || || |||||| || ||||   |||| |||||||||||||||||||||    
T  1864479 cacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaatcgatgacttaagattattgaatgttagtcc 1864380  T
Q  178 cacccttaccttataatgaatgatcggcgg 207  Q
    ||||||||||||| ||||||||||||||||    
T  1864379 cacccttaccttagaatgaatgatcggcgg 1864350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 37428549 - 37428667
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgt 171  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||       || |  ||||||| |||| |||||  |||| | ||||||||||| |    
T  37428549 caattatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttgaatacaatattcagaatcaatgacttaggattattgaatat 37428648  T
Q  172 tagtcccacccttacctta 190  Q
    |||||||||||||||||||    
T  37428649 tagtcccacccttacctta 37428667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 15978355 - 15978486
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||| ||| |        || || || ||||||||| |||||  |||| ||||    
T  15978355 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 15978453  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||||||||||||||||||    
T  15978454 ttattgaatgttagtcccacccttaccttataa 15978486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 44495534 - 44495605
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||| ||| ||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  44495534 aattatcataatcatagacttaagaagattgaatgttagtcccacccttaccttagaatgaatgatcggcgg 44495605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 10247064 - 10246934
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||  ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  10247064 aaaatcatca-aataatcacttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 10246966  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  10246965 ttattgaatgttagtcccacccttaccttata 10246934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 55477312 - 55477442
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  55477312 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 55477410  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||| |||||||||||||||    
T  55477411 ttattgaatgttagtctcacccttaccttata 55477442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 7780671 - 7780557
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||| ||| |        || || || ||||||||| |||||  |||| |||||||||||||||||||||    
T  7780671 cacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 7780572  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  7780571 cacccttaccttata 7780557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 14967287 - 14967344
Alignment:
Q  258 aaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcct 315  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  14967287 aaaaagcagtttcacgtaaaagcttttctaaacctagttttctccttatatctctcct 14967344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 15413251 - 15413382
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaa--------acctgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||        || || || || ||||||| | |||||  |||| ||||    
T  15413251 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctaccacatgttaaatccaatttttagaatcaatgacttaaga 15413349  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||||||| |||||||||||||||||||    
T  15413350 ttattgaatgttaatcccacccttaccttataa 15413382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 16453601 - 16453487
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaa-cctg----atat---atacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||| ||| |||     ||||   || ||||||||| |||||  |||| |||||||||||||||||||||    
T  16453601 cacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatattaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 16453502  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  16453501 cacccttaccttata 16453487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 45577783 - 45577652
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||   ||| ||||    
T  45577783 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaattacttaaga 45577685  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||| ||||||||||||||||    
T  45577684 ttattgaatgttagtctcacccttaccttataa 45577652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 15446811 - 15446750
Alignment:
Q  257 caaaaagcagtttcacgtaaaa-acgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||| || |||||||||||||||| || ||||||||||||||||    
T  15446811 caaaaagcagtttcacgtaaaagacttttctaaacctagtttcctccttatatctctcctca 15446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 14671778 - 14671832
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||||||||||    
T  14671778 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctt 14671832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 52465315 - 52465257
Alignment:
Q  258 aaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctc 316  Q
    ||||||||||||||| ||||||| |||| ||||||||||| || |||||||||||||||    
T  52465315 aaaaagcagtttcacctaaaaacttttccaaacctagtttcctccttatatctctcctc 52465257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 13151057 - 13151000
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| ||||   |||| ||||||||||||||||||||||||||||||||||||    
T  13151057 caattttcagaatcgatgacttaagattattgaatgttagtcccacccttaccttata 13151000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 13153525 - 13153468
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| ||||   |||| ||||||||||||||||||||||||||||||||||||    
T  13153525 caattttcagaatcgatgacttaagattattgaatgttagtcccacccttaccttata 13153468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 3263896 - 3263837
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    ||||||||||||||||||||||||  |||| |||||||||| || ||||||||||||||||    
T  3263896 caaaaagcagtttcacgtaaaaactcttct-aacctagtttcctccttatatctctcctca 3263837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 16828405 - 16828281
Alignment:
Q  71 aatcatcacaatcatcactcttaaccctaattctcaaattctc-aaaaactaaa-cctgatatatacaat----tttcaaaatcatagactcaagattat 164  Q
    |||||||| ||| |||||| ||||||||||||||||||||||| |||||||||| ||| | || |  |||    ||||| ||||||||||| ||||| |     
T  16828405 aatcatca-aattatcacttttaaccctaattctcaaattctccaaaaactaaaacctaacatgttaaatccaatttcagaatcatagacttaagatcac 16828307  T
Q  165 tgaatgttagtcccacccttacctta 190  Q
    |||||| |||||||||||||||||||    
T  16828306 tgaatgatagtcccacccttacctta 16828281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 45606178 - 45606138
Alignment:
Q  152 gactcaagattattgaatgttagtcccacccttaccttata 192  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  45606178 gacttaagattattgaatgttagtcccacccttaccttata 45606138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 24177662 - 24177607
Alignment:
Q  262 agcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    ||||||||||| ||||||| ||||||||||||||||  | ||||||||||||||||    
T  24177662 agcagtttcacttaaaaacttttctaaacctagtttcttccttatatctctcctca 24177607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 28847947 - 28847831
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||| ||| |        || || || ||||||||| ||||   |||| ||||||||||||| |||||    
T  28847947 atcacttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatattagt 28847848  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  28847847 cccacccttaccttata 28847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 52988791 - 52988727
Alignment:
Q  257 caaaaagcagtttcacgtaaaaa----cgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||    | |||||||||||||||| || ||||||||||||||||    
T  52988791 caaaaagcagtttcacgtaaaaaaaaacttttctaaacctagtttcctccttatatctctcctca 52988727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 6468402 - 6468348
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| |||||  |||| ||||||||||||||||| ||||||||||||||||    
T  6468402 aattttcagaatcaatgacttaagattattgaatgttactcccacccttacctta 6468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 14604856 - 14604914
Alignment:
Q  132 atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||| |||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  14604856 atacaattttcagaatcaatgacttaagataattgaatattagtcccacccttacctta 14604914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 37641555 - 37641487
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    ||||| |||||||| || ||||  ||||||||||||||||||||||||||||  ||  |||||||||||    
T  37641555 tttcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagtattgatgatcggcgg 37641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 12386280 - 12386381
Alignment:
Q  96 cctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacct 188  Q
    ||||||||||||||||||||||||||| |||       | || ||||||   ||||||||||||||| || |  |||||||| |||||||||||||||||    
T  12386280 cctaattctcaaattctcaaaaactaatcctacaacgtgttaaatacaaccatcaaaatcatagacttaatagaattgaatgctagtcccacccttacct 12386379  T
Q  189 ta 190  Q
    ||    
T  12386380 ta 12386381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 22146819 - 22146768
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  22146819 tttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22146768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 5224324 - 5224374
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  5224324 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 5224374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 26054485 - 26054435
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || |||| ||||||||||||||| |||||||||||||    
T  26054485 ttcagaatcataggcttaagaatattgaatgttagtctcacccttacctta 26054435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 45606247 - 45606198
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaac 119  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||||||||||    
T  45606247 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaac 45606198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 9578552 - 9578597
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  9578552 aatcataggcttaagaagattgaatgttagtcccacccttacctta 9578597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 17547380 - 17547316
Alignment:
Q  271 acgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttt-tcttattt 334  Q
    |||| ||||| |||||||||||||||| ||  ||||||||||||||| || ||||| ||||||||    
T  17547380 acgtgaaaacttttctaaacctagtttcctctttatatctctcctcaatccattttatcttattt 17547316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 4e-75; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 22050535 - 22050350
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22050535 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcgctcttaaccctaattctcaaattc 22050436  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||     ||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22050435 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 22050350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 9044703 - 9044515
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9044703 gagatgaaaagaaaaaacagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 9044604  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||||||||       || ||  ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9044603 tcaaaaactaaacctacaacatgttaagtacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttataa 9044515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 16274761 - 16274573
Alignment:
Q  12 gagatgaaaaga---aaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaa 108  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16274761 gagatgaaaagaaaaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaa 16274662  T
Q  109 ttctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16274661 ttctcaaaaactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtctcacccttacctta 16274573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 22122519 - 22122344
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22122519 gagatgaaaagaaaaatcagaaaaagcaacccatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 22122420  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccac 180  Q
    |||||||||||||||     ||||   |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22122419 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccac 22122344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 29298898 - 29299083
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29298898 gagatgaaaagaaaaatcataaaaagcaacccatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccataattctcaaattc 29298997  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||     ||||   |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  29298998 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagattcaagattattgaatgttagtcccacccttacctta 29299083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 40129548 - 40129732
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40129548 gagatgaaaagaaaaatcataaaaagcaacccatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctctaattc 40129647  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||     ||||   |||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  40129648 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaaaattattgaatgttagtctcacccttacctt 40129732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 41231106 - 41230941
Alignment:
Q  31 gaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaacta-------aa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  41231106 gaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacttacaa 41231007  T
Q  124 cctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    | || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41231006 catgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 41230941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 43543365 - 43543545
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |    
T  43543365 gagatgaaaagaaaaatcagaaaaatcaacttatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaacccaaattctcaaaaac 43543464  T
Q  112 tcaaaaacta-aacctgatatataca---attttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |  ||| ||| ||| || || |||||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43543465 t--aaacctacaacatgttaaatacaattattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 43543545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 15859501 - 15859386
Alignment:
Q  12 gagatgaaaagaaaaa-tcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 110  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15859501 gagatgaaaagaaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 15859402  T
Q  111 ctcaaaaactaaacct 126  Q
    ||||||||||||||||    
T  15859401 ctcaaaaactaaacct 15859386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 22122311 - 22122168
Alignment:
Q  53 aacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct----gatat---atacaattttcaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||   |||||||||||| |    
T  22122311 aacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatattaaatacaattttcaga 22122212  T
Q  146 atcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22122211 atcatagactcaagattattgaatgttagtcccacccttacctt 22122168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 31613215 - 31613389
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||| ||||||||||||||||||    
T  31613215 gagatgaaaagaaaaatcagaaaaagcaacccatattattcaacttcactttcattcaa---------aatcatcactctt-accctaattctcaaattc 31613304  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    || ||||||||||||     ||||   |||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||    
T  31613305 tcgaaaactaaacctacaacatattaaatacaattttcacaatcacaaactcaagattattgaatgttagtcccaccattacctt 31613389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 43630287 - 43630215
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatca 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630287 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatca 43630215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 16401578 - 16401651
Alignment:
Q  12 gagatgaaaagaaaaatcag-aaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatca 84  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16401578 gagatgaaaagaaaaatcgggaaaaagcaatctatattattcaacttcactttcattcaaaatcatcacaatca 16401651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 51083112 - 51083226
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||||||||||||||| |||||||||||||||||||    
T  51083112 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcaaaatcatagacttaagattattgaatgttagt 51083211  T
Q  176 cccacccttacctta 190  Q
    |||||||||||||||    
T  51083212 cccacccttacctta 51083226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 41373316 - 41373439
Alignment:
Q  92 taaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccaccct 183  Q
    |||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| |||||||||||||||||||||||||||    
T  41373316 taaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccaccct 41373415  T
Q  184 taccttataatgaatgatcggcgg 207  Q
    ||||||| ||||||||||||||||    
T  41373416 taccttagaatgaatgatcggcgg 41373439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 46560072 - 46560130
Alignment:
Q  132 atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46560072 atacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 46560130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 23592877 - 23592798
Alignment:
Q  257 caaaaagcagtttcacgtaaaaac--gtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    |||||||||||||||||||||||   |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  23592877 caaaaagcagtttcacgtaaaaaaaagtttctaaacatagttttcttctcatatctctcctcattttatttttcttattt 23592798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 23593056 - 23592927
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| ||||   |||| |||||||||||||||||||||    
T  23593056 cacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 23592957  T
Q  178 cacccttaccttataatgaatgatcggcgg 207  Q
    ||||||||||||| ||||||||||||||||    
T  23592956 cacccttaccttagaatgaatgatcggcgg 23592927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 13989686 - 13989816
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  13989686 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 13989784  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  13989785 ttattgaatgttagtcccacccttaccttata 13989816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 12327676 - 12327616
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  12327676 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctctcctca 12327616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 14237783 - 14237655
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| || ||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| ||||||||||| ||||    
T  14237783 aaaatcatca-aataattacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcatagacttaaga 14237685  T
Q  161 ttattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||||||||||||||||||||    
T  14237684 ttattgaatattagtcccacccttacctta 14237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 29777397 - 29777465
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaa-gcaacctatattattcaacttcactttcattcaaaatcatcac 79  Q
    ||||||||||||||||||||||||| | |||||||||||||| |||||||||| |||||||||||||||    
T  29777397 gagatgaaaagaaaaatcagaaaaaaggaacctatattattccacttcacttttattcaaaatcatcac 29777465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 21474426 - 21474296
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| ||||   |||| ||||    
T  21474426 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaaga 21474328  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  21474327 ttattgaatgttagtcccacccttaccttata 21474296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 42314796 - 42314751
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42314796 aatcatagactcaagattattgaatgttagtcccacccttacctta 42314751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 51336605 - 51336665
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| ||||||||| |||||| || ||||||||||||||||    
T  51336605 caaaaagcagtttcacgtaaaaacttttctaaacatagtttcctccttatatctctcctca 51336665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 16362740 - 16362871
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| |||||||| |||  ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  16362740 aaaatcatca-aataatcacttttaacccttatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 16362838  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||||||||||||||||||    
T  16362839 ttattgaatgttagtcccacccttaccttataa 16362871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 21922558 - 21922501
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  21922558 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 21922501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 24007158 - 24007101
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcc 314  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||| |||||||||    
T  24007158 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttgtatctctcc 24007101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 34770621 - 34770660
Alignment:
Q  151 agactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34770621 agactcaagattattgaatgttagtcccacccttacctta 34770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 48444388 - 48444443
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||    
T  48444388 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 48444443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 21841664 - 21841722
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||| |||||  |||| |||||||||||||||||||| ||||||||||||||||    
T  21841664 caattttcagaatcaatgacttaagattattgaatgttagtctcacccttaccttataa 21841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 21042622 - 21042505
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgt 171  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||       || || ||  |||| ||| |||||||| || ||||  |||||||||    
T  21042622 caattatcactcttaaccctaatt-tcaatttctcaaaaactaaacctacaacatgttaaatctaattatcataatcataggcttaagaagattgaatgt 21042524  T
Q  172 tagtcccacccttacctta 190  Q
    |||||||||||||||||||    
T  21042523 tagtcccacccttacctta 21042505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 22145605 - 22145545
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||| |||||||||||| |||| |||||||||||||||| || ||| ||||||||||||    
T  22145605 caaaaaacagtttcacgtagaaacttttctaaacctagtttcctccttgtatctctcctca 22145545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 51476977 - 51477045
Alignment:
Q  122 aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||| || || ||||||||| ||||||| |||||| |||||| || |||||||||||||||||||||    
T  51476977 aacctgttaaattcaattttcagaatcatatactcaaaattattaaaggttagtcccacccttacctta 51477045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 22350713 - 22350768
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||||||| |||||  ||||||||| |||||||||||||||||||||    
T  22350713 caattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 22350768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 20030688 - 20030637
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||| ||| ||||||| |||||| |||||||||||||||||||    
T  20030688 tttcaaaattataaacttaagattactgaatgatagtcccacccttacctta 20030637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 21995593 - 21995554
Alignment:
Q  261 aagcagtttcacgtaaaaacgtttctaaacctagttttct 300  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  21995593 aagcagtttcacgtaaaaacttttctaaacctagtcttct 21995554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 20453690 - 20453636
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||||||| || ||||  |||||||||||||| |||||||||||||    
T  20453690 aattatcaaaatcataggcttaagaagattgaatgttagtctcacccttacctta 20453636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 22130076 - 22130026
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  22130076 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22130026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 20959036 - 20959081
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  20959036 aatcataggcttaagaagattgaatgttagtcccacccttacctta 20959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 45574065 - 45574020
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  45574065 aatcataggcttaagaagattgaatgttagtcccacccttacctta 45574020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 13527623 - 13527559
Alignment:
Q  271 acgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattcta-tttttcttattt 334  Q
    |||| ||||| |||||||||||||||| ||  ||||||||||||||| |||| ||| ||||||||    
T  13527623 acgtgaaaacttttctaaacctagtttcctctttatatctctcctcaatctactttatcttattt 13527559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 141; Significance: 7e-74; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 107132 - 107318
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  107132 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaatttcactttcattcaaaatcaccacaatcatcactcttaaccctaattctcaaattc 107231  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttat 191  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  107232 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttat 107318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 115760 - 115819
Alignment:
Q  132 atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttat 191  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  115760 atacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttat 115819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 7108 - 7293
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  7108 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaaatatcactcttaaccctaattctcaaattc 7207  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7208 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 7293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 140; Significance: 3e-73; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 501721 - 501906
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  501721 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 501820  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  501821 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtaccacacttacctta 501906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 499057 - 499110
Alignment:
Q  137 attttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||| ||||| | |||||| ||||||||| |||||||||||||||||||||    
T  499057 attttcagaatcacatactcaaaattattgaaggttagtcccacccttacctta 499110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 447420 - 447465
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  447420 aatcataggcttaagaagattgaatgttagtcccacccttacctta 447465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 363030 - 363215
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  363030 gagatgaaaagaaaaatcataaaaagcaacatatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 363129  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  363130 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 363215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 14970212 - 14970027
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14970212 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 14970113  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||    
T  14970112 tcaaaaactaaacctataacatgttaaatacaattttcagaatcacagactcaagattattgaatgttagtctcacccttacctta 14970027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 18214709 - 18214521
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18214709 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttccttcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 18214610  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||||||||       || || ||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18214609 tcaaaaactaaacctacaacatgttaaatacaatttgcagaatcatagactcaagattattgaatgttagtcccacgcttaccttataa 18214521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 3515664 - 3515849
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3515664 gagatgaaaagaaaaatcagaaaaaacaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatta 3515763  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  3515764 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 3515849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 11953 - 11773
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11953 gagataaaaagaaaaatcagaaaaagcaacccatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 11854  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccaccctta 185  Q
    |||||||||||||||     ||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11853 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctta 11773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 15489654 - 15489469
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  15489654 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcttcacaatcatcacttttaaccctaattctcaaattc 15489555  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  15489554 tcaaaaactaaacctacaacatgttaaatacaattttcagaattatagactcaagattattgaatgttattcccacccttacctta 15489469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 12778381 - 12778196
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12778381 gagatgaaaagaaaa-tcagaaaaagcaacctatattattcaacttcactttcattcaaaattatcacaatcatcactcttaaccctaattctcaaattc 12778283  T
Q  112 tcaaaaactaaacc-------tgatatatacaa-ttttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  12778282 tcaaaaactaaacctacaacatgttaaatacaatttttcagaatcatagactcaagattattgaatgttagtcccacccttgcctta 12778196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 14745881 - 14745700
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  14745881 gagatgaaaagaaaaattagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcattactcttaaccttaattctcatattc 14745782  T
Q  112 tcaaaaactaaacct--gatatatacaat-tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||   | || |  ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14745781 tcaaaaactaaacctacaacatgttaaatatttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 14745700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 52313411 - 52313595
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  52313411 gagatgaaaagaaaaatcagaaaaagcaccccatattatttaacttcactttcattcaaaatcatcacaatcatcactcttaaccttaattctctaattc 52313510  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||     ||||   |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  52313511 tcaaaaactaaacctacaacatattaaatacaattttcagaatcatagacttaagattattgaatgttagtcccacccttacctt 52313595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 19617572 - 19617395
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||  |    
T  19617572 gagatgaaaagaaaaatcatagaaagcaacctatattattcaacttcactttcattcgaaatcatcaaaatcatcactcttaacccaaattctcaaaaac 19617473  T
Q  112 tcaaaaacta-aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |  ||| ||| ||| || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19617472 t--aaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 19617395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 52872578 - 52872402
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||    
T  52872578 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatca---------tcactcttaaccctaattctcaaattc 52872488  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  52872487 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttaatcccacccttacctta 52872402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 15355023 - 15354843
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||         |||||||||||||||||||||||||||    
T  15355023 gagatggaaagaaaaatcagaaaaagcaacctatgttattcaacttcactttcattcaaaatca---------tcactcttaaccctaattctcaaattc 15354933  T
Q  112 tcaaaaactaaacct----gat----atatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||     ||    | ||| |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15354932 tcaaaaactaaacctacaacatgttaaaataaaattatcagaatcatagactcaagattattgaatgttagttccacccttaccttataa 15354843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 70 - 190
Target Start/End: Original strand, 19858327 - 19858455
Alignment:
Q  70 aaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaa-ttttcaaaatcatagactcaagat 161  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||       || || |||||| |||||| |||||||||||||||||    
T  19858327 aaatcatcacaatcatcactcttaaccctaattatcaaattctcaaaaagtaaacctacaacatgttaaatacaatttttcagaatcatagactcaagat 19858426  T
Q  162 tattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||||||||||||||||    
T  19858427 tattgaatgttagtcccacccttacctta 19858455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 19243718 - 19243795
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19243718 caaaaagcagtttcacgtaaaaaagtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 19243795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 1836860 - 1836732
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct------gatatatacaattttcaaaatcatagactcaagatt 162  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||| ||||      | || |||||||||||| ||| ||||||||||||||    
T  1836860 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactatacctacaactgttaaatacaattttcagaatgatagactcaagatt 1836762  T
Q  163 attgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||    
T  1836761 attgaatgttagtcccacccttaccttata 1836732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 19243523 - 19243668
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  19243523 aaaatcatca-aataatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 19243621  T
Q  161 ttattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  19243622 ttattgaatgttagtcccacccttaccttagaatgaatgatcggcgg 19243668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 19858235 - 19858302
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcac 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19858235 gagatgaaaagaaaaattagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcac 19858302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 7640528 - 7640398
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| |||||| |||||| ||||||||||||||||||| |        || || |||||||||||| ||||||||||||||||    
T  7640528 aaaatcatca-aataatcacttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaaga 7640430  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||| |||||||||||||||    
T  7640429 ttattgaatgttagtctcacccttaccttata 7640398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 44616125 - 44616241
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||| ||||||||||||||||||||    
T  44616125 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagt 44616224  T
Q  176 cccacccttaccttata 192  Q
    | |||||||||||||||    
T  44616225 ctcacccttaccttata 44616241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 15117694 - 15117564
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  15117694 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 15117596  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  15117595 ttattgaatgttagtcccacccttaccttata 15117564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 3485803 - 3485913
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||||||||||||||||||||||| |        || || || ||||||||| ||||||||||| |||||||||||||||||||    
T  3485803 atcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcatagacttaagattattgaatgttagt 3485902  T
Q  176 cccacccttac 186  Q
    | |||||||||    
T  3485903 ctcacccttac 3485913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 16043892 - 16044010
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaacta-------aacctgatatatacaattttcaaaatcatagactcaagattattgaatgt 171  Q
    |||| |||||||||||||||||||||||||| |||||||||||       ||| || || |||||||||||| || |||||||| ||||||| || ||||    
T  16043892 caattatcactcttaaccctaattctcaaatcctcaaaaactaatcctataacatgttaaatacaattttcagaaccatagacttaagattactgcatgt 16043991  T
Q  172 tagtcccacccttacctta 190  Q
    ||||| |||||||||||||    
T  16043992 tagtctcacccttacctta 16044010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 50221664 - 50221550
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||||||||||||||||||     
T  50221664 cacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtct 50221565  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  50221564 cacccttaccttata 50221550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 10057785 - 10057841
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctc 313  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  10057785 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctctc 10057841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 18238954 - 18238823
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || |||||| || |||||  |||| ||||    
T  18238954 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaatcaatgacttaaga 18238856  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||| ||||||||||||||||    
T  18238855 ttattgaatgttagtctcacccttaccttataa 18238823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 44772425 - 44772294
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||| |||||||||||||||| |||||||||| |        ||  | || ||||||||| |||||  |||| ||||    
T  44772425 aaaatcatca-aataatcacttttaactctaattctcaaattctgaaaaactaaaacctacaacatgtaaaatccaattttcagaatcaatgacttaaga 44772327  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||||||||||||||||||    
T  44772326 ttattgaatgttagtcccacccttaccttataa 44772294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 12033040 - 12032983
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  12033040 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 12032983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 14717989 - 14717932
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  14717989 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 14717932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 29268249 - 29268306
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  29268249 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 29268306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 26014285 - 26014336
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||||    
T  26014285 tttcaaaatcacatactcaagattattgaaggttagtcccacccttacctta 26014336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 18023006 - 18023060
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||||||||||    
T  18023006 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctt 18023060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 25031099 - 25031214
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaa-ttttcaaaatcatagactcaagattattgaatgttag 174  Q
    |||||| |||||||||||||||||||||||||||||||        ||| || || || ||| |||||| ||||   |||| ||||||||||||||||||    
T  25031099 atcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaatttttcagaatcgatgacttaagattattgaatgttag 25031198  T
Q  175 tcccacccttacctta 190  Q
    ||||||||||||||||    
T  25031199 tcccacccttacctta 25031214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 14873413 - 14873297
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| |||||||||||||| |||| |        || || || ||||||||| ||||   |||| ||||||||||||| |||||    
T  14873413 atcacttttaaccctaattcccaaattctcaaaaattaaaacctacaacatgttaaatccaattttcagaatctatgacttaagattattgaattttagt 14873314  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  14873313 cccacccttaccttata 14873297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 26014420 - 26014471
Alignment:
Q  266 gtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    ||||||| ||||||| |||||||||||||||| || ||||||||||||||||    
T  26014420 gtttcacttaaaaacttttctaaacctagtttcctccttatatctctcctca 26014471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 22354669 - 22354723
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||| |||||||| || ||||  |||||||||||||||||||||||||||||||    
T  22354669 tttcagaatcataggcttaagaagattgaatgttagtcccacccttaccttataa 22354723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 26790258 - 26790308
Alignment:
Q  141 tcaaaatcatagactcaagattattgaatgttagtcccacccttaccttat 191  Q
    ||||||||||||||| ||||  |||||||||||||| ||||||||||||||    
T  26790258 tcaaaatcatagacttaagaaaattgaatgttagtctcacccttaccttat 26790308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 32306201 - 32306152
Alignment:
Q  141 tcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||| || ||||  ||||||||||||||||||||||||||||    
T  32306201 tcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 32306152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 13591106 - 13591069
Alignment:
Q  153 actcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||| || |||||||||||||||||||||    
T  13591106 actcaagattatttaaggttagtcccacccttacctta 13591069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 14187058 - 14187110
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatct 310  Q
    ||||||||||||||||||||||||  |||| |||||||||| || |||||||||    
T  14187058 caaaaagcagtttcacgtaaaaactcttct-aacctagtttcctccttatatct 14187110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 15792701 - 15792746
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  15792701 aatcataggcttaagaaaattgaatgttagtcccacccttacctta 15792746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 26049665 - 26049620
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  26049665 aatcataggcttaagaagattgaatgttagtcccacccttacctta 26049620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 27996790 - 27996843
Alignment:
Q  137 attttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||| ||||| | |||||  ||||||||| |||||||||||||||||||||    
T  27996790 attttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 27996843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 51463084 - 51463031
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||| |||||||||||| || ||||  |||||||||||||| ||||||||||||    
T  51463084 aattatcaaaatcataggcttaagaagattgaatgttagtctcacccttacctt 51463031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 12729754 - 12729690
Alignment:
Q  271 acgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttt-tcttattt 334  Q
    |||| ||||| |||||||||||||||| ||  ||||||||||||||| || ||||| ||||||||    
T  12729754 acgtgaaaacttttctaaacctagtttcctctttatatctctcctcaatccattttatcttattt 12729690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 14651620 - 14651672
Alignment:
Q  134 acaattttcaaaatcatagactcaagattattgaatgttagtcccacccttac 186  Q
    |||||||||| ||| |||| || ||||||| ||||||| ||||||||||||||    
T  14651620 acaattttcagaataatagtcttaagattaatgaatgtaagtcccacccttac 14651672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 43353 - 43169
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43353 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 43254  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||       || ||  |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43253 tcaaaaactaaacctacaacatgttaagtacaatattcagaatcatagactcaagattattgaatgttagtcccacccttacctt 43169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 60593 - 60777
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  60593 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 60692  T
Q  112 tcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||     ||||   ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  60693 tcaaaaactaaacctacaacatattaaataaaattttcagaaacatagactcaagattattgaatgttagtcccacccttacctt 60777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 7079 - 6897
Alignment:
Q  15 atgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctca 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7079 atgaaaagaaaaatcagaaaaagcaacctatattattcaatttcacttttattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctca 6980  T
Q  115 aaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6979 aaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 6897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 1365 - 1550
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1365 gagatgaaatgaaaaatcagaaaaagcaacatatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccataattctcaaattc 1464  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1465 tcaataactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 1550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 5351 - 5536
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5351 gagatgaatagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcagtcttaaccctaattctcaaattc 5450  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  5451 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttattcccacccttacctta 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 136; Significance: 6e-71; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 16945 - 16760
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16945 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 16846  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||||       || || |||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  16845 tcaaaaactcaacctacaacatgttaaatacaatttttagaatcatagactcaagattattgaatgttagtctcacccttacctta 16760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 95231 - 95361
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  95231 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 95329  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  95330 ttattgaatgttagtcccacccttaccttata 95361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 7441 - 7626
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7441 gagatgaaaagaaaaatcagaaatagcaacctatattactcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 7540  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  7541 tcaaaaactaaacctacaacatgttaaatacaattctcagaatcatagactcaagattattgaatgttagtctcacccttacctta 7626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 222 - 36
Alignment:
Q  12 gagatgaaaagaaaaa-tcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 110  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  222 gagatgaaaagaaaaaattagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 123  T
Q  111 ctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
     ||||||||||||||       || || |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  122 ttcaaaaactaaacctacaacatgttaaatacaattttcagaatcacagactcaagattattgaatgttagtcccacccttacctta 36  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 8589 - 8774
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8589 gagatgaaaagaaaaattagaaaaagcaacctatattattcaacttcacattcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 8688  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||       || || |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  8689 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatacactcaagattattgaatgttagttccacccttaactta 8774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 484 - 668
Alignment:
Q  13 agatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattct 112  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  484 agatgaaaagaaaaatgagaaaaagcaacctatattattcaacttcactttcattcaaaataatcacaatcatcactcttaaccctaattctcaaattct 583  T
Q  113 caaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||     ||||   |||||||||||| ||||||||| || ||||||||||||||||||| |||||||||||||    
T  584 caaaaactaaacctacaacatattaaatacaattttcagaatcatagagtcgagattattgaatgttagtctcacccttacctta 668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 20709 - 20527
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  20709 gagatgaaaagaaaaatcagaaaaaacaacctatattattcaacttcactttgattcaaaatcatcacaatcatcactcttaaccttaattctaaaattc 20610  T
Q  112 tcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacc 187  Q
    ||||||||| ||||       || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20609 tcaaaaactgaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacc 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 22867 - 22700
Alignment:
Q  30 agaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc---- 125  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        
T  22867 agaaaaataaacctatattatgcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactcaacctaca 22768  T
Q  126 ---tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22767 acatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 22700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 14843 - 14900
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  14843 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 14900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 10644 - 10826
Alignment:
Q  15 atgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctca 114  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  10644 atgaaaagaaaaataagaaaaaacaacctatattattcaacttcactttcattcaaaatcatcacaatcgtcactcttaagcctaattctcaaattctca 10743  T
Q  115 aaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||       || || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  10744 aaaactaaacctacaatatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 10826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 6441 - 6257
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6441 gagatgaaaa-aaaattcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 6343  T
Q  112 tcaaaaacta-------aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||       ||| || || |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||    
T  6342 tcaaaaactaaatctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccctttcctta 6257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 10844 - 10660
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 111  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10844 gagatgaaaa-aaaattcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattc 10746  T
Q  112 tcaaaaacta-------aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| |       ||| || || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  10745 tcaaaaacaaaatctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 10660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 15568 - 15643
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatca 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15568 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatca 15643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 1911 - 2096
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaactt-cactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatt 110  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1911 gagatgaaaagaaaaatcagaaaa-gcaacctatattattcaactttcactttcattcaaaatcatcacaatcatcactcttaaccctgattctcaaatt 2009  T
Q  111 ctcaaaaactaaacct----gatat---atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||     ||||   |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||    
T  2010 ctcaaaaactaaacctataacatattaaatacaattttcagaatcatagacttaagattattgaatgttagtctcacccttacctta 2096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 1033 - 1200
Alignment:
Q  30 agaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc---- 125  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        
T  1033 agaaaaataaacctatattatgcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactcaacctaca 1132  T
Q  126 ---tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
       || || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1133 acatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 3524 - 3662
Alignment:
Q  59 actttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct----gatat---atacaattttcaaaatcata 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||   |||||||||||| |||||||    
T  3524 actttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatattaaatacaattttcagaatcata 3623  T
Q  152 gactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3624 gactcaagattattgaatgttagtcccacccttacctta 3662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 184978 - 185110
Alignment:
Q  64 cattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || || |||||||||||| ||||||||||||    
T  184978 cattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactc 185077  T
Q  157 aagattattgaatgttagtcccacccttacctt 189  Q
    |||||||||||||||||||||||||||||||||    
T  185078 aagattattgaatgttagtcccacccttacctt 185110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 118792 - 118755
Alignment:
Q  153 actcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||| |||||||||||||||||||||    
T  118792 actcaagattattgaaggttagtcccacccttacctta 118755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 36740 - 36599
Alignment:
Q  56 ttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatc 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||       || || |||||||||||| ||||    
T  36740 ttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctcaaatttttaaaaactaaacctacaacatgttaaatacaattttcagaatc 36641  T
Q  149 atagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  36640 atagactcaagattattgaatgttagtcccacacttacctta 36599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 38354 - 38261
Alignment:
Q  12 gagatgaaaagaaaaatcagaaaaagcaacctatattattcaacttcactttcattcaaaatcatcacaatcatcactcttaaccctaattctc 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38354 gagatgaaaagagaaatcagaaaaagcaacctatattattcaacttcacttttattcaaaatcatcacaatcatcactcttaaccctaattctc 38261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 9044 - 9088
Alignment:
Q  82 tcatcactcttaaccctaattctcaaattctcaaaaactaaacct 126  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||    
T  9044 tcatcacttttaaccctaattcccaaattctcaaaaattaaacct 9088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 83115 - 83192
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  83115 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 83192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 81697 - 81753
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctc 313  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  81697 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctctc 81753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 83003 - 83065
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||||||| || ||||  ||||||||||| |||||||||||||||| ||||||||||||||||    
T  83003 aatcataggcttaagaagattgaatgttaatcccacccttaccttagaatgaatgatcggcgg 83065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 74; Significance: 6e-34; HSPs: 3)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 21766 - 21843
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21766 caaaaagcagtttcacgtaaaaaagtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 21843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 21585 - 21716
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||||||||||||||||||||||| |        || || || ||||||||| |||||  |||| |||||||||||||||||||    
T  21585 atcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagt 21684  T
Q  176 cccacccttaccttataatgaatgatcggcgg 207  Q
    ||||||||||||||| ||||||||||||||||    
T  21685 cccacccttaccttagaatgaatgatcggcgg 21716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 19167 - 19223
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    |||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  19167 aattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 19223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 3044 - 2916
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacct------gatatatacaattttcaaaatcatagactcaagatt 162  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||| ||||      | || |||||||||||| ||||||||||||||||||    
T  3044 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactatacctacaactgttaaatacaattttcagaatcatagactcaagatt 2946  T
Q  163 attgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||    
T  2945 attgaatgttagtcccacccttaccttata 2916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 81 - 190
Target Start/End: Original strand, 21898 - 22014
Alignment:
Q  81 atcatcactcttaaccctaattctcaaattctcaaaaactaaacct-------gatatatacaattttcaaaatcatagactcaagattattgaatgtta 173  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||       | || |||||||||||| |||||||||||||||||||||||||||||    
T  21898 atcatcactgttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcacaatcatagactcaagattattgaatgtta 21997  T
Q  174 gtcccacccttacctta 190  Q
    ||| |||||||||||||    
T  21998 gtctcacccttacctta 22014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 158621 - 158734
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| |||||||||||||||||||||    
T  158621 cacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 158720  T
Q  178 cacccttaccttat 191  Q
    ||||||||||||||    
T  158721 cacccttaccttat 158734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 1191 - 1268
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 334  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1191 caaaaagcagtttcacgtaaaaatatttctaaacctagttttcttcttatatctctcctcattctatttttcttattt 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 1081 - 1143
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    |||||||| || ||||  |||||||||||||| ||||||||||||| ||||||||||||||||    
T  1081 aatcataggcttaagaagattgaatgttagtctcacccttaccttagaatgaatgatcggcgg 1143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 190
Target Start/End: Original strand, 6046 - 6163
Alignment:
Q  80 aatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgtt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       || || |||||||||||| |||||||||||||| |||||||||||||    
T  6046 aatcatcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaaaattattgaatgtt 6145  T
Q  173 agtcccacccttacctta 190  Q
    |||| |||| ||||||||    
T  6146 agtctcacctttacctta 6163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 135047 - 135163
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||| ||||||||||||||||||||    
T  135047 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagt 135146  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  135147 cccacccttaccttata 135163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 137516 - 137632
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||| ||||||||||||||||||||    
T  137516 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagt 137615  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  137616 cccacccttaccttata 137632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 139985 - 140101
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||| ||||||||||||||||||||    
T  139985 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagt 140084  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  140085 cccacccttaccttata 140101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 142454 - 142570
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||| ||||||||||||||||||||    
T  142454 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagt 142553  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  142554 cccacccttaccttata 142570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 144923 - 145039
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||| ||||||||||||||||||||    
T  144923 atcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagt 145022  T
Q  176 cccacccttaccttata 192  Q
    |||||||||||||||||    
T  145023 cccacccttaccttata 145039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 56332 - 56218
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||| ||||||||||||||||||| |        || || |||||||||||| |||||||||| ||||||||||||||||||||||    
T  56332 cacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 56233  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  56232 cacccttaccttata 56218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 39080 - 38949
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| |||||||||||||||||||||| |||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  39080 aaaatcatca-aataatcacttttaaccctaattctcaaattctaaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 38982  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||||||||||||||||||||    
T  38981 ttattgaatgttagtcccacccttaccttataa 38949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 38642 - 38772
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| |        || || || ||||||||| |||||  |||| ||||    
T  38642 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 38740  T
Q  161 ttattgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||||    
T  38741 ttattgaatgttagtcccacccttaccttata 38772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 11858 - 11915
Alignment:
Q  132 atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  11858 atacaattttcaaaatcatagactcaagattattgaatgttagtctcacccgtacctt 11915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 13756 - 13816
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  13756 caaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctctcctca 13816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 12110 - 12238
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||| |        || || || ||||||||| |||||  |||| ||||    
T  12110 aaaatcatca-aataatcacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaaga 12208  T
Q  161 ttattgaatgttagtcccacccttacctta 190  Q
    ||||||||||||||||||||||||||||||    
T  12209 ttattgaatgttagtcccacccttacctta 12238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 6765 - 6896
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaattttcaaaatcatagactcaaga 160  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||||||||||        ||| || || || ||||||||| ||| |  |||| ||||    
T  6765 aaaatcatca-aataatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaattaatgacttaaga 6863  T
Q  161 ttattgaatgttagtcccacccttaccttataa 193  Q
    |||||||||||||||| ||||||||||||||||    
T  6864 ttattgaatgttagtctcacccttaccttataa 6896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 10082 - 10197
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||||||||||||||||||||||||||||||||| ||| |        || || || ||||||||| |||||  |||| ||||||||||||||||||||     
T  10082 cactcttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtct 10181  T
Q  178 cacccttaccttataa 193  Q
    ||||||||||||||||    
T  10182 cacccttaccttataa 10197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 22909 - 23038
Alignment:
Q  69 aaaatcatcacaatcatcactcttaaccctaattctcaaattctcaaaaacta--------aacctgatatatacaattttcaaaatcatagactcaa-g 159  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||||||||||||        ||| || || || ||||||| | ||||||||||| || |    
T  22909 aaaatcatca-aataatcacttttaaccctaattcccaaattctcaaaaactataacctacaacatgttaaatccaatttttagaatcatagacttaaag 23007  T
Q  160 attattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||||||||||||||||||    
T  23008 attattgaatgttagtcccacccttacctta 23038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 8166 - 8224
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||||||||||||||    
T  8166 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttataa 8224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 192
Target Start/End: Original strand, 10762 - 10791
Alignment:
Q  163 attgaatgttagtcccacccttaccttata 192  Q
    ||||||||||||||||||||||||||||||    
T  10762 attgaatgttagtcccacccttaccttata 10791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 7871 - 7981
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| |||||| |||||| ||||||||||||||||||| |        || || || ||||||| | ||||||||||| |||||||||||||||||||    
T  7871 atcacttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagt 7970  T
Q  176 cccacccttac 186  Q
    |||||||||||    
T  7971 cccacccttac 7981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 23 - 80
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  23 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 80  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 14230 - 14344
Alignment:
Q  86 cactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcc 177  Q
    |||| ||||||||||||||||||||||||||||| ||| |        || || || ||||||| | |||||  |||| |||||||||||||||||||||    
T  14230 cacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttgagaatcaatgacttaagattattgaatgttagtcc 14329  T
Q  178 cacccttaccttata 192  Q
    |||||||||||||||    
T  14330 cacccttaccttata 14344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 33892 - 33835
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||||||  |||| |||||||||||||||||||| |||||||||||||||    
T  33892 caattttcaaaatcaatgacttaagattattgaatgttagtctcacccttaccttata 33835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 5436 - 5326
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| |||||| |||||| ||||||||||||||||||| |        || || || ||||||| | ||||||||||| |||||||||||||||||||    
T  5436 atcacttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagt 5337  T
Q  176 cccacccttac 186  Q
    |||||||||||    
T  5336 cccacccttac 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 190
Target Start/End: Complemental strand, 133 - 19
Alignment:
Q  84 atcactcttaaccctaattctcaaattctcaaaaactaaacc--------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagt 175  Q
    |||||| |||||||| |||| ||||||||||||||||||| |        || || || ||||||| | ||||||||||| ||||||||||||| |||||    
T  133 atcacttttaaccctcattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatattagt 34  T
Q  176 cccacccttacctta 190  Q
    | |||||||||||||    
T  33 ctcacccttacctta 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 15381 - 15442
Alignment:
Q  257 caaaaagcagtttcacgtaaaa-acgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||||||||| || |||||||||||||||| || ||||||||||||||||    
T  15381 caaaaagcagtttcacgtaaaagacttttctaaacctagtttcctccttatatctctcctca 15442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 41293 - 41350
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  41293 caattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata 41350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 5485 - 5545
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    ||||||||| | |||||||||||| |||||||||||||||| || ||||||||||||||||    
T  5485 caaaaagcattgtcacgtaaaaacttttctaaacctagtttactccttatatctctcctca 5545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 5363 - 5435
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcggcgg 207  Q
    ||||||||| ||||||| ||| |  |||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  5363 caattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttagaattaatgatcggcgg 5435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 23653 - 23713
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||| || ||||||||||||||||||||| || |||||| |||||||||    
T  23653 caaaaagcagtttcacatagaaacgtttctaaacctagtttcctccttatacctctcctca 23713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 15076 - 15136
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||| ||||||| |||||| ||||||||| || ||||||||||||||||    
T  15076 caaaaagcagtttcacttaaaaacttttctacacctagtttcctccttatatctctcctca 15136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 17096 - 17156
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||||||||||||| ||||||| |||||| ||||||||| || ||||||||||||||||    
T  17096 caaaaagcagtttcacttaaaaacttttctacacctagtttcctccttatatctctcctca 17156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 220449 - 220334
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-----tgatatatacaattttcaaaatcatagactcaagattattgaatgtta 173  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||     || || ||  |||  ||| |||||||| || ||||  |||||||||||    
T  220449 caattatcactcttaaccctaatt-tcaaattctcaaaaactaaacctaccatgttaaatctaatcatcagaatcataggcttaagaagattgaatgtta 220351  T
Q  174 gtcccacccttacctta 190  Q
    |||||||||||||||||    
T  220350 gtcccacccttacctta 220334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 191915 - 191798
Alignment:
Q  79 caatcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgt 171  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||       || || ||  |||| ||| |||||||| || ||||  |||||||||    
T  191915 caattatcactcttaaccctaatt-tcaaattctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgt 191817  T
Q  172 tagtcccacccttacctta 190  Q
    |||||||||||||||||||    
T  191816 tagtcccacccttacctta 191798  T

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Target: scaffold0359 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 16330 - 16385
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  16330 caattttcagaataatagacttaagattaatgaatgttagtcccacccttacctta 16385  T

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Target: scaffold0454 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 476 - 534
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataa 193  Q
    ||||||||| |||||  |||| |||||||||||||||||||| ||||||||||||||||    
T  476 caattttcagaatcaatgacttaagattattgaatgttagtctcacccttaccttataa 534  T

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Target: scaffold0686 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 1559 - 1608
Alignment:
Q  259 aaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatat 308  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||    
T  1559 aaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatat 1608  T

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Target: scaffold0480 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 10273 - 10387
Alignment:
Q  82 tcatcactcttaaccctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttag 174  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||       || || || ||||| ||| |||||||| || ||||  ||||||||||||    
T  10273 tcatcacttttaaccctaattcccaaattctcaaaa-ctaaaccaacaacatgctaaatgcaattatcagaatcataggcttaagaagattgaatgttag 10371  T
Q  175 tcccacccttacctta 190  Q
    ||||||||||||||||    
T  10372 tcccacccttacctta 10387  T

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Target: scaffold0577 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 9184 - 9244
Alignment:
Q  257 caaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctctcctca 317  Q
    |||||| |||||||||| |||||| |||||||||||||||| || ||||||||||| ||||    
T  9184 caaaaatcagtttcacgcaaaaacttttctaaacctagtttcctccttatatctctgctca 9244  T

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Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 51366 - 51326
Alignment:
Q  152 gactcaagattattgaatgttagtcccacccttaccttata 192  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  51366 gacttaagattattgaatgttagtcccacccttaccttata 51326  T

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Target: scaffold0500 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 8346 - 8447
Alignment:
Q  96 cctaattctcaaattctcaaaaactaaacc-------tgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacct 188  Q
    ||||||||||||||||||||||||||||||       || || | |||||||||| ||| || |||| ||||||| ||||||||||| ||||||||| ||    
T  8346 cctaattctcaaattctcaaaaactaaaccttcaacatgttaaagacaattttcagaataatggacttaagattaatgaatgttagttccacccttatct 8445  T
Q  189 ta 190  Q
    ||    
T  8446 ta 8447  T

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Target: scaffold0117 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 40270 - 40219
Alignment:
Q  139 tttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||| || ||||  ||||||||||||||||||||||||||||    
T  40270 tttcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 40219  T

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Target: scaffold0117; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 42673 - 42723
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  42673 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 42723  T

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Target: scaffold0780 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 2508 - 2471
Alignment:
Q  153 actcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||||||||||| |||||||||||||||||||||    
T  2508 actcaagattattgaaggttagtcccacccttacctta 2471  T

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Target: scaffold0780; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 2583 - 2542
Alignment:
Q  85 tcactcttaaccctaattctcaaattctcaaaaactaaacct 126  Q
    ||||| |||||||||||||||||||||| ||||||| |||||    
T  2583 tcacttttaaccctaattctcaaattctaaaaaacttaacct 2542  T

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Target: scaffold0232 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 4222 - 4270
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccaccct 183  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||||    
T  4222 caattttcagaatcaatgacttaagattattgaatgttagtcccaccct 4270  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 534 - 474
Alignment:
Q  132 atacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttata 192  Q
    |||||||||||| |||||||| || ||||  |||||||||| ||| |||||||||||||||    
T  534 atacaattttcagaatcataggcttaagaagattgaatgttcgtctcacccttaccttata 474  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 158877 - 158809
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttataatgaatgatcg 203  Q
    ||||||| | ||||||| |||||  ||||||||| ||||||||||||||||||||| | ||| ||||||    
T  158877 caatttttagaatcatatactcagaattattgaaggttagtcccacccttaccttagattgattgatcg 158809  T

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Target: scaffold1419 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 903 - 938
Alignment:
Q  91 ttaaccctaattctcaaattctcaaaaactaaacct 126  Q
    ||||||||||||||||||| ||||||||||||||||    
T  903 ttaaccctaattctcaaatcctcaaaaactaaacct 938  T

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Target: scaffold0180 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 28384 - 28329
Alignment:
Q  135 caattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    ||||||||| ||||||| |||||  ||||||||| | |||||||||||||||||||    
T  28384 caattttcagaatcatatactcagaattattgaagggtagtcccacccttacctta 28329  T

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Target: scaffold0394 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 13046 - 13100
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| ||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  13046 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 13100  T

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Target: scaffold0290 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 1070 - 1124
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| ||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  1070 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 1124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 18595 - 18645
Alignment:
Q  140 ttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  18595 ttcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 18645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 42293 - 42347
Alignment:
Q  136 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||| ||| |||||||| || ||||  ||||||||||||||||||||||||||||    
T  42293 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 42347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 113488 - 113550
Alignment:
Q  23 aaaaatcagaaaaagcaacctatattattcaa-cttcactttcattcaaaatcatcacaatca 84  Q
    |||| ||| |||||||||| ||  |||||||| |||||| |||||||||||||||||||||||    
T  113488 aaaagtcaaaaaaagcaacttaacttattcaaacttcacattcattcaaaatcatcacaatca 113550  T

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Target: scaffold0125 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 1096 - 1051
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||    
T  1096 aatcataggcttaagaagattgaatgttagtcccacccttacctta 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 16126 - 16081
Alignment:
Q  149 atagactcaagattattgaatgttagtcccacccttaccttataat 194  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  16126 atagacttaagaaaattgaatgttagtctcacccttaccttataat 16081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 128209 - 128172
Alignment:
Q  85 tcactcttaaccctaattctcaaattctcaaaaactaa 122  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  128209 tcactcttaactctaattctcaaattctctaaaactaa 128172  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 333248 - 333293
Alignment:
Q  149 atagactcaagattattgaatgttagtcccacccttaccttataat 194  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  333248 atagacttaagaaaattgaatgttagtctcacccttaccttataat 333293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 8626 - 8694
Alignment:
Q  122 aacctgatatatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 190  Q
    |||||| || || ||||||||| ||||||| ||| |  |||| |||| |||||||||||||||||||||    
T  8626 aacctgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctta 8694  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 7216 - 7260
Alignment:
Q  145 aatcatagactcaagattattgaatgttagtcccacccttacctt 189  Q
    |||||||| || ||||  |||||||||||||||||||||||||||    
T  7216 aatcataggcttaagaagattgaatgttagtcccacccttacctt 7260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 165672 - 165620
Alignment:
Q  134 acaattttcaaaatcatagactcaagattattgaatgttagtcccacccttac 186  Q
    |||||||||| ||| |||| || ||||||| ||||||| ||||||||||||||    
T  165672 acaattttcagaataatagtcttaagattaatgaatgtaagtcccacccttac 165620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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