View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15408_low_25 (Length: 330)
Name: NF15408_low_25
Description: NF15408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15408_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 34473348 - 34473642
Alignment:
| Q |
15 |
atgaactgaattatagaagaatagagaaaataaatagtataatatttggaagaaacaaaccagggtctatgagttcactaacaagctgaatctgtatccc |
114 |
Q |
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| T |
34473348 |
atgaactgaattatagaagaatagagaaaataaatagtataatatttggaagaaacaaaccagggtctatgagttcactaacaagctgaatctgtatccc |
34473447 |
T |
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| Q |
115 |
ttgaccaacaccattaaagaaatactccaactgatcctcaacctcctcaaccacactacctttcattttctttcttatcatcaccactgctttcacctct |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34473448 |
ttgaccaacaccattaaagaaatactccaactgatcctcaacctcctcaaccacactacctttcattttctttcttatcatcaccactgctttcacctct |
34473547 |
T |
|
| Q |
215 |
atcgttccaccatcgcttctgccatcactcgagctactttgtaacgagccattgctcactttgttgtccaccggagatgaggtcgtagtcttgct |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34473548 |
atcgttccaccatcgcttctgccatcactcgagctactttgtaacgaaccattgctcactttgttgtccaccggagatgaggtcgtagtcttgct |
34473642 |
T |
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