View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15408_low_27 (Length: 321)
Name: NF15408_low_27
Description: NF15408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15408_low_27 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 17 - 305
Target Start/End: Complemental strand, 51292254 - 51291966
Alignment:
| Q |
17 |
atatttcgtacaattgaacttgatcaaatacaaggtacgatatctttactctttatatatcaatcattgttattgttaaaggtattttattgctcttatt |
116 |
Q |
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| T |
51292254 |
atatttcgtacaattgaacttgatcaaatacaaggcacgatatctttactctttatatatcattcattgttattgttaaaggtattttattgctcttatt |
51292155 |
T |
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| Q |
117 |
cactaatcatattatttgttgtattgnnnnnnnnnnnnnnnnncattaatctcgttttaaagggaaaaagttagataccgttggtgtacaactatatata |
216 |
Q |
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|||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51292154 |
cactaatcatattatttgttgtattgttttctttttactttttcattaatctcattttaaagggaaaaagttagataccgttggtgtacaactatatata |
51292055 |
T |
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| Q |
217 |
ataatcctctaaaaagccacttgcgatttggtaaatttccggtaataattgatggctgaggattatggttcttcaaaatgcatgttcat |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51292054 |
ataatcctctaaaaagccacttgcgatttggtaaatttccggtaataattgatggctgaggattatggttcttcaaaatgcatgttcat |
51291966 |
T |
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