View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15408_low_8 (Length: 506)
Name: NF15408_low_8
Description: NF15408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15408_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 463; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 17 - 491
Target Start/End: Complemental strand, 32706813 - 32706339
Alignment:
| Q |
17 |
atcaattatgttatgaaaaatgattataaatttataaacaatgttattttgagaatattgataatgtgacatggactattgaacaggtgacctatcccaa |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
32706813 |
atcaattatgttatgaaaaatgattataaatttataaacaatgttattttgagaatattgataatgtaacatggactattgaacaggtgacctatcccaa |
32706714 |
T |
|
| Q |
117 |
tatgatggaattctttgagagtcttggagttgaaatggaattatcagacatgtcattttctgtcagcctagacaaaggccgtggctgcgaatggggcagc |
216 |
Q |
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| T |
32706713 |
tatgatggaattctttgagagtcttggagttgaaatggaattatcagacatgtcattttctgtcagcctagacaaaggccgtggctgcgaatggggcagc |
32706614 |
T |
|
| Q |
217 |
agaagtttgtctggcttattcgcacagaagagaaatgcattgaatccttatttttggcaaatgattagggaaattgtcaaattcaaagatgatgctataa |
316 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32706613 |
agaagtttgtccggcttattcgcacagaagagaaatgcattgaatccttatttttggcaaatgattagggaaattgtcaaattcaaagatgatgctataa |
32706514 |
T |
|
| Q |
317 |
ggcaagtacataatcgatttatcggctgcacttacttttgctcatccatagtacaagttcaatttttctgtaggtgtttgactgttagtgaactcagaaa |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32706513 |
ggcaagtacataatcgatttatcggctgcacttacttttgctcatccatagtacaagttcaatttttctgtaggtgtttgactgttagtgaactcagaaa |
32706414 |
T |
|
| Q |
417 |
tatcaagtaatatattcaaattagattgtgctttctttctaaaagatatatatcctgtgaaacaattggtatctg |
491 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
32706413 |
tatcaagtaatatattcaaattagattgtgctttctttctaaaagaaatatatcctgtgaaacaattggtatctg |
32706339 |
T |
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