View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15409_high_6 (Length: 256)

Name: NF15409_high_6
Description: NF15409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15409_high_6
NF15409_high_6
[»] chr5 (21 HSPs)
chr5 (6-215)||(39083286-39083498)
chr5 (81-243)||(18149736-18149899)
chr5 (81-215)||(28290052-28290187)
chr5 (81-215)||(8419029-8419163)
chr5 (81-215)||(15029717-15029852)
chr5 (82-211)||(38900648-38900778)
chr5 (81-166)||(19291359-19291445)
chr5 (81-153)||(14340401-14340474)
chr5 (81-215)||(21371104-21371239)
chr5 (181-243)||(5161948-5162010)
chr5 (81-166)||(15115549-15115635)
chr5 (81-215)||(28289687-28289822)
chr5 (81-217)||(4966819-4966955)
chr5 (177-215)||(18150131-18150169)
chr5 (81-166)||(21370689-21370775)
chr5 (81-166)||(38901097-38901183)
chr5 (81-166)||(4967228-4967314)
chr5 (181-215)||(21370798-21370832)
chr5 (81-166)||(32697683-32697769)
chr5 (116-163)||(5161620-5161668)
chr5 (179-211)||(14340819-14340851)
[»] chr8 (33 HSPs)
chr8 (81-243)||(41260274-41260437)
chr8 (81-215)||(18428169-18428305)
chr8 (81-215)||(5730820-5730955)
chr8 (83-215)||(18049595-18049729)
chr8 (81-232)||(15255856-15256008)
chr8 (81-215)||(28254428-28254564)
chr8 (81-166)||(2208717-2208803)
chr8 (81-166)||(9797184-9797270)
chr8 (81-166)||(15256288-15256374)
chr8 (81-215)||(599906-600041)
chr8 (81-215)||(28254834-28254969)
chr8 (81-211)||(34799082-34799214)
chr8 (81-215)||(16578111-16578246)
chr8 (81-207)||(16578512-16578639)
chr8 (81-211)||(34799495-34799626)
chr8 (81-215)||(41260669-41260804)
chr8 (81-211)||(42035775-42035906)
chr8 (81-166)||(35694335-35694421)
chr8 (81-211)||(9796729-9796860)
chr8 (81-211)||(35427224-35427355)
chr8 (177-215)||(26252909-26252947)
chr8 (81-215)||(599535-599670)
chr8 (81-215)||(5731220-5731355)
chr8 (81-215)||(18049999-18050134)
chr8 (178-215)||(35693971-35694008)
chr8 (81-166)||(6115568-6115654)
chr8 (81-126)||(35426845-35426890)
chr8 (103-166)||(7911073-7911137)
chr8 (180-215)||(35694278-35694313)
chr8 (177-215)||(15256236-15256274)
chr8 (210-243)||(18049734-18049767)
chr8 (81-126)||(28877387-28877432)
chr8 (103-166)||(42036229-42036293)
[»] chr3 (48 HSPs)
chr3 (81-243)||(49720741-49720904)
chr3 (82-243)||(329850-330012)
chr3 (81-211)||(49951549-49951680)
chr3 (81-211)||(38535312-38535443)
chr3 (81-215)||(50662820-50662955)
chr3 (81-214)||(43678298-43678432)
chr3 (82-215)||(55389609-55389743)
chr3 (81-211)||(51473267-51473399)
chr3 (81-215)||(51828365-51828501)
chr3 (81-215)||(44676880-44677015)
chr3 (81-211)||(41998232-41998364)
chr3 (81-243)||(330206-330379)
chr3 (81-166)||(2051298-2051384)
chr3 (68-215)||(32730797-32730945)
chr3 (81-215)||(46013830-46013966)
chr3 (81-208)||(51828955-51829083)
chr3 (81-166)||(14654202-14654288)
chr3 (81-215)||(47431699-47431835)
chr3 (81-211)||(51472858-51472989)
chr3 (81-166)||(16701249-16701335)
chr3 (81-215)||(22370599-22370735)
chr3 (84-215)||(34104644-34104775)
chr3 (81-215)||(38535703-38535838)
chr3 (81-215)||(40838655-40838790)
chr3 (81-215)||(40839060-40839195)
chr3 (81-215)||(51827960-51828095)
chr3 (81-215)||(52237225-52237360)
chr3 (81-215)||(40275096-40275233)
chr3 (81-215)||(40275502-40275636)
chr3 (81-216)||(16689361-16689497)
chr3 (81-215)||(52375739-52375874)
chr3 (81-211)||(55390009-55390140)
chr3 (81-215)||(14654599-14654732)
chr3 (81-215)||(25534893-25535029)
chr3 (102-162)||(39010482-39010543)
chr3 (81-215)||(49720374-49720509)
chr3 (81-215)||(49951954-49952089)
chr3 (177-215)||(51828640-51828678)
chr3 (89-215)||(2044282-2044409)
chr3 (81-215)||(46013425-46013560)
chr3 (81-215)||(52375330-52375465)
chr3 (81-166)||(30513725-30513810)
chr3 (81-215)||(44676475-44676610)
chr3 (81-243)||(52236819-52236992)
chr3 (177-211)||(16701201-16701235)
chr3 (81-158)||(41998693-41998771)
chr3 (81-165)||(39010078-39010163)
chr3 (103-166)||(43222415-43222479)
[»] chr7 (40 HSPs)
chr7 (81-215)||(9181535-9181670)
chr7 (81-215)||(25637606-25637741)
chr7 (81-215)||(15712368-15712503)
chr7 (81-217)||(7732893-7733030)
chr7 (81-215)||(48247999-48248135)
chr7 (81-215)||(27245612-27245747)
chr7 (81-166)||(11971337-11971423)
chr7 (81-243)||(5333883-5334046)
chr7 (81-215)||(5745642-5745777)
chr7 (81-211)||(16081302-16081433)
chr7 (81-215)||(28687596-28687731)
chr7 (74-215)||(14311695-14311837)
chr7 (81-211)||(786785-786917)
chr7 (81-166)||(16917716-16917802)
chr7 (81-166)||(26047960-26048046)
chr7 (105-217)||(26048353-26048465)
chr7 (81-211)||(7732491-7732622)
chr7 (81-211)||(16081711-16081842)
chr7 (81-211)||(26026730-26026861)
chr7 (81-166)||(5334276-5334362)
chr7 (103-215)||(28687907-28688020)
chr7 (81-166)||(787243-787329)
chr7 (81-215)||(25637200-25637336)
chr7 (81-215)||(27245206-27245342)
chr7 (81-211)||(39388679-39388811)
chr7 (178-215)||(9181817-9181854)
chr7 (84-211)||(35161213-35161342)
chr7 (81-163)||(48247590-48247673)
chr7 (177-211)||(24929715-24929749)
chr7 (81-166)||(24929765-24929851)
chr7 (81-166)||(34595229-34595315)
chr7 (81-215)||(2758106-2758241)
chr7 (89-126)||(35160664-35160701)
chr7 (177-215)||(26026418-26026456)
chr7 (177-211)||(48247691-48247725)
chr7 (178-215)||(11971439-11971476)
chr7 (178-211)||(14311417-14311450)
chr7 (81-126)||(40669706-40669751)
chr7 (181-217)||(5184498-5184534)
chr7 (181-213)||(35160906-35160938)
[»] chr4 (43 HSPs)
chr4 (81-215)||(34789385-34789520)
chr4 (75-215)||(54440977-54441118)
chr4 (81-211)||(28465493-28465624)
chr4 (81-215)||(14440236-14440371)
chr4 (81-215)||(46736658-46736793)
chr4 (81-215)||(56077732-56077867)
chr4 (81-208)||(28166007-28166135)
chr4 (81-243)||(33777992-33778155)
chr4 (81-211)||(21034238-21034370)
chr4 (81-215)||(45838955-45839092)
chr4 (81-215)||(26974286-26974422)
chr4 (81-215)||(12593027-12593162)
chr4 (81-241)||(33777635-33777796)
chr4 (103-241)||(6617044-6617183)
chr4 (81-215)||(14439831-14439966)
chr4 (89-215)||(41114168-41114297)
chr4 (81-217)||(36168737-36168874)
chr4 (72-217)||(54440565-54440709)
chr4 (81-166)||(6616675-6616761)
chr4 (81-166)||(24851319-24851405)
chr4 (81-211)||(34789794-34789926)
chr4 (81-215)||(28465084-28465219)
chr4 (81-211)||(34807551-34807682)
chr4 (81-215)||(24851873-24852009)
chr4 (81-166)||(41608872-41608958)
chr4 (81-165)||(1397598-1397683)
chr4 (81-215)||(12593431-12593566)
chr4 (81-215)||(16214903-16215038)
chr4 (81-215)||(46737063-46737198)
chr4 (81-215)||(33689832-33689966)
chr4 (81-215)||(21034644-21034780)
chr4 (100-166)||(35643577-35643644)
chr4 (81-215)||(19528872-19529008)
chr4 (177-215)||(24851565-24851603)
chr4 (177-215)||(34807217-34807255)
chr4 (81-215)||(229567-229702)
chr4 (103-166)||(17504416-17504480)
chr4 (177-213)||(35643968-35644004)
chr4 (81-166)||(19529151-19529237)
chr4 (177-211)||(35643667-35643701)
chr4 (177-215)||(36168432-36168470)
chr4 (181-211)||(55677369-55677399)
chr4 (81-166)||(55677415-55677501)
[»] chr2 (45 HSPs)
chr2 (81-211)||(38008363-38008494)
chr2 (81-215)||(11539640-11539776)
chr2 (81-215)||(20127739-20127875)
chr2 (81-215)||(33921019-33921155)
chr2 (81-166)||(16952938-16953024)
chr2 (81-166)||(17060909-17060995)
chr2 (81-215)||(43160418-43160554)
chr2 (81-215)||(62960-63095)
chr2 (99-243)||(13399790-13399944)
chr2 (81-215)||(44219647-44219782)
chr2 (81-208)||(4809294-4809422)
chr2 (81-215)||(13315496-13315634)
chr2 (81-215)||(4356164-4356299)
chr2 (81-215)||(20128145-20128280)
chr2 (81-215)||(42192243-42192378)
chr2 (65-215)||(11540046-11540199)
chr2 (81-241)||(32418529-32418689)
chr2 (81-166)||(5560054-5560140)
chr2 (81-211)||(6949454-6949586)
chr2 (81-243)||(6949822-6949987)
chr2 (81-215)||(15551082-15551218)
chr2 (81-215)||(24140087-24140217)
chr2 (81-159)||(649801-649880)
chr2 (105-217)||(43216115-43216228)
chr2 (80-215)||(4808881-4809017)
chr2 (80-215)||(33920614-33920750)
chr2 (81-215)||(42192650-42192786)
chr2 (81-215)||(4355758-4355893)
chr2 (82-215)||(16175757-16175892)
chr2 (81-211)||(16953346-16953477)
chr2 (81-215)||(44220051-44220188)
chr2 (81-166)||(63421-63507)
chr2 (81-211)||(38007953-38008085)
chr2 (81-215)||(649530-649665)
chr2 (177-215)||(5560958-5560996)
chr2 (177-215)||(13399522-13399560)
chr2 (81-139)||(9329915-9329974)
chr2 (81-215)||(15550676-15550812)
chr2 (89-166)||(20495204-20495282)
chr2 (81-215)||(32418162-32418295)
chr2 (177-215)||(43160110-43160148)
chr2 (81-163)||(25336060-25336143)
chr2 (177-215)||(63366-63404)
chr2 (81-158)||(9330260-9330338)
chr2 (210-243)||(44219787-44219820)
[»] chr6 (15 HSPs)
chr6 (81-210)||(24640598-24640728)
chr6 (81-215)||(5114471-5114606)
chr6 (81-215)||(25472420-25472556)
chr6 (81-215)||(31573723-31573863)
chr6 (81-215)||(31073550-31073685)
chr6 (81-215)||(30251099-30251235)
chr6 (81-211)||(5120881-5121012)
chr6 (81-215)||(31574133-31574268)
chr6 (81-215)||(29891488-29891627)
chr6 (177-240)||(31073250-31073313)
chr6 (81-166)||(25468852-25468938)
chr6 (177-215)||(28636604-28636642)
chr6 (81-153)||(31073146-31073219)
chr6 (177-217)||(28636391-28636431)
chr6 (103-158)||(31242831-31242887)
[»] chr1 (37 HSPs)
chr1 (81-215)||(9992157-9992293)
chr1 (81-215)||(34555788-34555925)
chr1 (89-241)||(29439303-29439457)
chr1 (81-211)||(21938566-21938697)
chr1 (81-218)||(37505070-37505209)
chr1 (81-211)||(30786774-30786906)
chr1 (81-166)||(50305242-50305328)
chr1 (81-215)||(10278958-10279090)
chr1 (81-215)||(44954634-44954769)
chr1 (81-215)||(9992563-9992698)
chr1 (81-215)||(16299090-16299224)
chr1 (81-215)||(52335918-52336053)
chr1 (81-215)||(1837508-1837643)
chr1 (81-166)||(37421401-37421488)
chr1 (73-215)||(17641772-17641920)
chr1 (81-166)||(44582516-44582602)
chr1 (75-215)||(10278545-10278687)
chr1 (81-166)||(30787255-30787341)
chr1 (81-215)||(2868116-2868251)
chr1 (103-166)||(2867936-2868000)
chr1 (81-211)||(37505480-37505610)
chr1 (102-215)||(44954250-44954364)
chr1 (103-215)||(23340208-23340321)
chr1 (116-215)||(17641403-17641503)
chr1 (81-166)||(29438933-29439019)
chr1 (81-211)||(443963-444094)
chr1 (81-215)||(8230049-8230184)
chr1 (103-209)||(16298707-16298814)
chr1 (178-215)||(34555482-34555519)
chr1 (83-215)||(4080026-4080159)
chr1 (177-215)||(1744427-1744465)
chr1 (177-215)||(8229740-8229778)
chr1 (81-166)||(50304442-50304528)
chr1 (81-215)||(39485068-39485202)
chr1 (81-166)||(45048158-45048244)
chr1 (178-215)||(6224800-6224837)
chr1 (81-153)||(44582060-44582133)
[»] scaffold0712 (1 HSPs)
scaffold0712 (89-215)||(6403-6530)
[»] scaffold0709 (1 HSPs)
scaffold0709 (89-215)||(6421-6548)
[»] scaffold0097 (2 HSPs)
scaffold0097 (81-166)||(46725-46811)
scaffold0097 (177-217)||(46367-46407)
[»] scaffold0025 (1 HSPs)
scaffold0025 (177-217)||(78417-78457)


Alignment Details
Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 39083286 - 39083498
Alignment:
Q  6 gtgttgagttgagggtgatgatttaagagggaaatcaatctcatatcagtta-tgtaaaattaatattaaaaagagttaattatacttttggttctacca 104  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || |||| | ||| ||    
T  39083286 gtgttgagttgagggtgatgatttgagagggaaatcaatctcatatcagttagtgtaaaattaatattaaaaagacttaattacac-tttgatcctatca 39083384  T
Q  105 ttttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaac--tannnnnnnnnngcagttttagtcctatctccctatt 201  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||  ||          |||||||||||| ||||||| ||||    
T  39083385 ttttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatattttttgcagttttagtcatatctccatatt 39083484  T
Q  202 tccaactccagaaa 215  Q
    ||||||||||||||    
T  39083485 tccaactccagaaa 39083498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 18149736 - 18149899
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||||||||| |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||          |||    
T  18149736 ttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 18149835  T
Q  180 gttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| || || ||| ||||||    
T  18149836 gttttagtcctatttccctatttccaactccataaatgacagttttagtctaaccacttatgct 18149899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 28290187 - 28290052
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||          |||    
T  28290187 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 28290088  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  28290087 gttttagtcctatctccctatttccaactccagaaa 28290052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 8419163 - 8419029
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||  |||||||| ||||||||||||          |||    
T  8419163 ttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaacta-tatttttttgca 8419065  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  8419064 gttttagtcctatctccctatttccaactccagaaa 8419029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 15029852 - 15029717
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| || |||||||||||||||||||||||| ||| || |||||||||||| |||||||| ||||||||||||          |||    
T  15029852 ttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 15029753  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||| | ||||||||||||| |||||||||||    
T  15029752 gttttagttcgatctccctatttcaaactccagaaa 15029717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 211
Target Start/End: Original strand, 38900648 - 38900778
Alignment:
Q  82 taattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcag 180  Q
    |||||| ||||||||| ||  |||||||||||||||||||||||| ||||| || ||||||||| |||||||| |||| |||| ||          ||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgcag 38900747  T
Q  181 ttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||    
T  38900748 ttttagtcctatctccctatttccaactcca 38900778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 19291359 - 19291445
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| |||| ||||||| |||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||    
T  19291359 ttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 19291445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 14340401 - 14340474
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaat 153  Q
    ||||||| | ||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  14340401 ttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaat 14340474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 21371239 - 21371104
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||  ||||||||||||||||  ||| || ||||| || |||||||||||||||||| |||| |||||||          |||    
T  21371239 ttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgttttttgca 21371140  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
     |||||||||||||||||||||||||||||||||||    
T  21371139 attttagtcctatctccctatttccaactccagaaa 21371104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 5162010 - 5161948
Alignment:
Q  181 ttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||||||||||| |||| ||||| |||||||||| |||||||||||| ||||||||||    
T  5162010 ttttagtcctatctcccaatttacaacttcagaaatgacggttttaatccaaccacctatgct 5161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 15115635 - 15115549
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||| | ||  ||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||||||||||    
T  15115635 ttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaacta 15115549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 28289687 - 28289822
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||  ||||||||||||||||||||| | ||| || || ||||||||| |||||||| |||| |||| ||           ||    
T  28289687 ttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttcca 28289786  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  28289787 gttttagtcctatctccctatttccaactccagaaa 28289822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 4966819 - 4966955
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| || ||  || ||||||||| |||||||| |||| |||||||          |||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatgtttttagca 4966918  T
Q  180 gttttagtcctatctccctatttccaactccagaaatg 217  Q
    ||||||||| |||| ||||||||||||||| |||||||    
T  4966919 gttttagtcatatc-ccctatttccaactctagaaatg 4966955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 18150169 - 18150131
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18150169 gcagttttagtcctatctccctatttccaactccagaaa 18150131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 21370689 - 21370775
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||| |||| || |||| ||||||||||||| |||||||| ||  ||||||||||||||| |||||||| ||| ||||||||    
T  21370689 ttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaacta 21370775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 38901183 - 38901097
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| || |||||||||| ||  |||||||||| ||||| | |||||||||| |||||||| ||||||||||||    
T  38901183 ttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaacta 38901097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 4967314 - 4967228
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||  ||||||||||||||||| ||||| ||| || || ||||||||| |||||||| |||| |||||||    
T  4967314 ttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaacta 4967228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 21370798 - 21370832
Alignment:
Q  181 ttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||    
T  21370798 ttttagtcctatctccctatttccaactccagaaa 21370832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 32697769 - 32697683
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| |||||||||  |  ||||||||||||||||||||| | |||||| || ||||||||| |||| ||| |||| |||||||    
T  32697769 ttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaacta 32697683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 5161620 - 5161668
Alignment:
Q  116 tcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaa 163  Q
    |||||||||| ||| ||||||||||||||| |||||||||||| |||||    
T  5161620 tcacgaaaattgtcatatcttttttaaatcgaacaaaattgtctttaaa 5161668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 14340851 - 14340819
Alignment:
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||| ||||||||||||||    
T  14340851 agttttagtcctatctccttatttccaactcca 14340819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 41260274 - 41260437
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  41260274 ttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 41260373  T
Q  180 gttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||    
T  41260374 gttttagtcttatctccctatttccaactctagaaatgacacttttagtccaaccacctatgct 41260437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 18428305 - 18428169
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||           ||    
T  18428305 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 18428206  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||| |||||||||||||||||||||||||||||    
T  18428205 agttttactcctatctccctatttccaactccagaaa 18428169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 5730820 - 5730955
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||          ||     
T  5730820 ttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatgttttttgct 5730919  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||| ||||||||||  |||||||||||    
T  5730920 gttttagtcctacctccctatttttaactccagaaa 5730955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 18049595 - 18049729
Alignment:
Q  83 aattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngcag 180  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||||||| |||||||| ||||||||||||           ||||    
T  18049595 aattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcag 18049694  T
Q  181 ttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||    
T  18049695 ttttagtcctatctccctatttccaactccagaaa 18049729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 15255856 - 15256008
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| || ||||| || ||||||||| |||||||| |||| |||||||          |||    
T  15255856 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 15255955  T
Q  180 gttttagtcctatctccctatttccaactccagaaatgacagttttaatccaa 232  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  15255956 gttttagtcctatctccctatttccaactccataaatgacagttttagtccaa 15256008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 28254428 - 28254564
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||| ||||||||  |||||||| ||||||||||||           ||    
T  28254428 ttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttgc 28254527  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  28254528 agttttagtcctatctccctatttccaactccagaaa 28254564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 2208717 - 2208803
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  2208717 ttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaacta 2208803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 9797270 - 9797184
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  9797270 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaacta 9797184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 15256374 - 15256288
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  15256374 ttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 15256288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 600041 - 599906
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||  |||||||| ||||||||||||          |||    
T  600041 ttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatgttttttgca 599942  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| |||||| |||||||||| ||||||||    
T  599941 gttttagtcttatctctctatttccaattccagaaa 599906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 28254969 - 28254834
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| || ||||| || ||||||||| |||||||| |||| |||||||          |||    
T  28254969 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatataatttttgca 28254870  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  28254869 gttttagtcctatctccctatttccaactccagaaa 28254834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 34799082 - 34799214
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| |||||||||  ||||||||||||||||||| |||||| ||||||| ||||||||||| |||||| | ||||||||||||           ||    
T  34799082 ttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgtttttttgc 34799181  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||||    
T  34799182 agttttagtcctatctccctatttccaactcca 34799214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 16578111 - 16578246
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||||||  ||||||||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||| ||          |||    
T  16578111 ttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgca 16578210  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16578211 gttttggtcctatctccctatttccaactccagaaa 16578246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 16578639 - 16578512
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||| ||  ||||||||| ||||| ||||||||  || ||||||||          |||    
T  16578639 ttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgttttttgca 16578540  T
Q  180 gttttagtcctatctccctatttccaac 207  Q
    ||||||||||||||||||||||||||||    
T  16578539 gttttagtcctatctccctatttccaac 16578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 34799626 - 34799495
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||||||||| | |||||| || ||||| || ||||||||| ||||||||||||| |||||||          |||    
T  34799626 ttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgttttttgca 34799527  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||| ||||||||||||||||    
T  34799526 gttttagtcctatcttcctatttccaactcca 34799495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 41260804 - 41260669
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    |||||||||||||||||  |  |||||||| |||||||||||| || || || || ||||||||| |||||||| |||| |||||||          |||    
T  41260804 ttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 41260705  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||| ||||||||||||    
T  41260704 gttttagtcctatctccctattttcaactccagaaa 41260669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 42035775 - 42035906
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| || ||| || ||||||||| |||||||| |||| |||||||          |||    
T  42035775 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatatattttgca 42035874  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
     ||||||||||||||||||||||| |||||||    
T  42035875 attttagtcctatctccctatttctaactcca 42035906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 35694421 - 35694335
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| || |||||||||| ||||||| |||||| |||||  ||||||||||| |||||||| ||||||||||||    
T  35694421 ttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaacta 35694335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 9796729 - 9796860
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||| ||| | |||||| || ||||||||| ||||||||  ||| |||||||          |||    
T  9796729 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgttttttgca 9796828  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||| ||||||||||||||||||||||    
T  9796829 gttttagtcatatctccctatttccaactcca 9796860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 35427355 - 35427224
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| || ||| || ||||||| | |||||||| |||| |||| ||          |||    
T  35427355 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatatattttttgca 35427256  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    |||||||||| |||||||||||||||||||||    
T  35427255 gttttagtcccatctccctatttccaactcca 35427224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 26252909 - 26252947
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26252909 gcagttttagtcctatctccctatttccaactccagaaa 26252947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 599535 - 599670
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||| ||  ||||||||||||||||||||| || || || || ||||||||| ||||||||  ||| |||| ||          |||    
T  599535 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatgttttttgca 599634  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||||||||||||||||    
T  599635 gttttagtcatatctccctatttccaactccagaaa 599670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 5731355 - 5731220
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    |||||||||||||| ||  |  |||||||||||||||| |||| || | ||| ||||| |||||| |||||||| |||| |||||||          |||    
T  5731355 ttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgttttttgca 5731256  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||| |||||||||||||| ||||||||||||    
T  5731255 gttttagttctatctccctattttcaactccagaaa 5731220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 18050134 - 18049999
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||| ||  ||||||||||||||||||||| | ||| || || ||||||||| |||||||| |||| |||||||          ||     
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgct 18050035  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||| |||||||||||||||| ||||||||||||    
T  18050034 gttttaatcctatctccctattttcaactccagaaa 18049999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 35693971 - 35694008
Alignment:
Q  178 cagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35693971 cagttttagtcctatctccctatttccaactccagaaa 35694008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 6115654 - 6115568
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||||||||||| ||   |||||||||||||| ||||| | |||||| || ||||||||| |||||||| |||| |||||||    
T  6115654 ttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 6115568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 35426845 - 35426890
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg 126  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||    
T  35426845 ttaattacacttttagtcctaccattttgaccaactcacgaaaatg 35426890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 7911137 - 7911073
Alignment:
Q  103 cattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||||||||||||||||| || ||| || ||||||||| |||||||| |||| |||||||    
T  7911137 cattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaacta 7911073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 35694313 - 35694278
Alignment:
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35694313 gttttagtcttatctccctatttccaactccagaaa 35694278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 15256274 - 15256236
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  15256274 gcagttctagtcatatctccctatttccaactccagaaa 15256236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 18049734 - 18049767
Alignment:
Q  210 cagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||||||||||||||||| ||||||||||    
T  18049734 cagaaatgacagttttaatccaaccacctatgct 18049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 28877432 - 28877387
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg 126  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||||    
T  28877432 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatg 28877387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 42036293 - 42036229
Alignment:
Q  103 cattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    |||||||||||||| ||||||||| || || || ||||||||| |||||||| |||| |||||||    
T  42036293 cattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaacta 42036229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 49720904 - 49720741
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||          |||    
T  49720904 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 49720805  T
Q  180 gttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  49720804 gttttagtcttatctccctatttccaactccagaaatgacagttttggtccaaccacctatgct 49720741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 329850 - 330012
Alignment:
Q  82 taattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcag 180  Q
    |||||| |||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||          ||||    
T  329850 taattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcag 329949  T
Q  181 ttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatgct 243  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||| ||||||    
T  329950 ttttagtcctatctccctgtttccaactccataaatgacagttttagtccaaccacttatgct 330012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 49951549 - 49951680
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  49951549 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 49951648  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
     |||||||||||||||||||||||||||||||    
T  49951649 attttagtcctatctccctatttccaactcca 49951680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 38535312 - 38535443
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  38535312 ttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 38535411  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    |||| |||||||||||||||||||||||||||    
T  38535412 gtttcagtcctatctccctatttccaactcca 38535443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 50662955 - 50662820
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||          |||    
T  50662955 ttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 50662856  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||| |||||||||| ||||||||||||    
T  50662855 gttttagtcctagctccctattttcaactccagaaa 50662820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 43678298 - 43678432
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||| |||||||| ||||||||||||          |||    
T  43678298 ttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 43678397  T
Q  180 gttttagtcctatctccctatttccaactccagaa 214  Q
    ||||||||| |||||||||||||||||||||||||    
T  43678398 gttttagtcttatctccctatttccaactccagaa 43678432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 55389609 - 55389743
Alignment:
Q  82 taattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcag 180  Q
    |||||| ||||||||| || |||||| ||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||          ||||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcag 55389708  T
Q  181 ttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||    
T  55389709 ttttagtcctatctccctatttccaactccagaaa 55389743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 51473399 - 51473267
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||           ||    
T  51473399 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 51473300  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||||    
T  51473299 agttttagtcctatctccctatttccaactcca 51473267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 51828501 - 51828365
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||           ||    
T  51828501 ttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgtttttttgc 51828402  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  51828401 agttttagtcctatctccctatttccaactccagaaa 51828365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 44677015 - 44676880
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||          |||    
T  44677015 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 44676916  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
     ||||||||||||||| |||||| ||||||||||||    
T  44676915 attttagtcctatctctctattttcaactccagaaa 44676880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 41998232 - 41998364
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||           ||    
T  41998232 ttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 41998331  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||| ||||||||||||||||||||||    
T  41998332 agttttagtcatatctccctatttccaactcca 41998364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 330379 - 330206
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| || |||||| ||  |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||          |||    
T  330379 ttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatgttttttgca 330280  T
Q  180 gttttagtcctatctccctatttccaactc----------cagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||| ||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||    
T  330279 gttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccacctatgct 330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 2051298 - 2051384
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||||    
T  2051298 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaacta 2051384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 32730945 - 32730797
Alignment:
Q  68 atattaaaaagagttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    |||| ||| ||| ||||||| |||||||||  ||||||||| ||||||||| ||||||| |||||||||||||||||  |||||||| ||||||||||||    
T  32730945 atataaaatagacttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaacta 32730846  T
Q  167 nnnnnnnnnngcagttttagtcctatctccctatttccaactccagaaa 215  Q
              ||||||||| ||||||||||||||||| |||||||||||    
T  32730845 tatgttttttgcagttttaatcctatctccctatttcaaactccagaaa 32730797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 46013966 - 46013830
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||| ||||||||||||||| | |||||| | |||||||||||||||| |||||||| ||||||||||||           ||    
T  46013966 ttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 46013867  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  46013866 agttttagtcctatctccctatttccaactccagaaa 46013830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 51829083 - 51828955
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||||||||  ||| ||||||| ||||||||||||||| || |||||||||||| ||||||||||| ||||||||||||          |||    
T  51829083 ttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgttttttgca 51828984  T
Q  180 gttttagtcctatctccctatttccaact 208  Q
    |||||||||||||||||||||||||||||    
T  51828983 gttttagtcctatctccctatttccaact 51828955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 14654202 - 14654288
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||    
T  14654202 ttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaacta 14654288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 47431699 - 47431835
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||| |||||||| ||| ||||||||           ||    
T  47431699 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgtttttttgc 47431798  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||| |||||||||||    
T  47431799 agttttagtcctatctccctatttctaactccagaaa 47431835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 51472858 - 51472989
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaa-atgtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||||||||||| ||  |||||||||||||||| ||||  | ||||| || ||||||||||||||||||||||| |||| ||          |||    
T  51472858 ttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgttttttgca 51472957  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||||||||||||    
T  51472958 gttttagtcctatctccctatttccaactcca 51472989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 16701335 - 16701249
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||| ||| |||||||||||| || |||||||| ||||||||||||    
T  16701335 ttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaacta 16701249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 22370599 - 22370735
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| |||||| |||||||||| |||||||||| |||| |||||||           ||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaa 22370735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 215
Target Start/End: Original strand, 34104644 - 34104775
Alignment:
Q  84 attatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagtt 182  Q
    |||| |||||| |||||||||||||||||||||||||||||| || |||||||||||||||  |||||||| ||| ||||||||          ||||||    
T  34104644 attacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatgttttttgcagtt 34104743  T
Q  183 ttagtcctatctccctatttccaactccagaaa 215  Q
    |||||| ||||| |||||||||| |||||||||    
T  34104744 ttagtcatatct-cctatttccagctccagaaa 34104775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 38535838 - 38535703
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||||||||||| |   |||||||||||||| |||||| | |||| |||| ||||||||| || ||||| |||| |||||||          |||    
T  38535838 ttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgttttttgca 38535739  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  38535738 gttttagtcctatctccctatttccaactccagaaa 38535703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 40838655 - 40838790
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||  ||||||||||||||||||||||| ||| || || |||||||||||||||||| |||| |||||||          |||    
T  40838655 ttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatgttttttgca 40838754  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| |||| |||||||||||||||||||||    
T  40838755 gttttagtcatatccccctatttccaactccagaaa 40838790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 40839195 - 40839060
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||| |||||||||||||| || || || ||||||||| |||||||| |||| |||||||          |||    
T  40839195 ttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 40839096  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||| |||||||||||    
T  40839095 gttttagtcctatctccctatttctaactccagaaa 40839060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 51827960 - 51828095
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||||||          |||    
T  51827960 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 51828059  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
     |||||||||||||||||||||| ||||||||||||    
T  51828060 tttttagtcctatctccctattttcaactccagaaa 51828095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 52237360 - 52237225
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| |||||| || ||||||||| |||||||| |||| |||| ||          |||    
T  52237360 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgca 52237261  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||| |||||| ||||    
T  52237260 gttttagtcctatctccctatttctaactccggaaa 52237225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 40275096 - 40275233
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaa--ctannnnnnnnnng 177  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| |||||| || ||||||||| ||||||||||||| ||||  |||          |    
T  40275096 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgttttttttg 40275195  T
Q  178 cagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  40275196 cagttttagtcctatctccatatttctaactccagaaa 40275233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 40275636 - 40275502
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatgtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcag 180  Q
    ||||||| ||||||||| ||  |||||||||||||||||||||  |||||| || ||||||||| |||||||| |||  |||||||          ||||    
T  40275636 ttaattacacttttggtcctcacattttgaccaactcacgaaatggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttgcag 40275537  T
Q  181 ttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||| |||| |||||||||||||||||||||    
T  40275536 ttttagtcatatccccctatttccaactccagaaa 40275502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 16689361 - 16689497
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||| ||| ||||||||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||| ||          |||    
T  16689361 ttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatgttttttgca 16689460  T
Q  180 gttttagtcctatctccctatttccaactccagaaat 216  Q
    |||||||||||||| |||||||||| |||||||||||    
T  16689461 gttttagtcctatcaccctatttccgactccagaaat 16689497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 52375874 - 52375739
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| |||||| || ||||||||  |||||||| |||| |||||||          |||    
T  52375874 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatgttttttgca 52375775  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| |||  |||||||||||||||||||||    
T  52375774 gttttagtcatattcccctatttccaactccagaaa 52375739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 55390140 - 55390009
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| |||  |||||||          | |    
T  55390140 ttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgttttttgta 55390041  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||| |||||||||||||||||||    
T  55390040 gttttagtcctacctccctatttccaactcca 55390009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 14654732 - 14654599
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatgtc-ctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| || | ||| || ||||||||| |||||||| |||| |||||||          |||    
T  14654732 ttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactatgtttttt--gca 14654635  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14654634 gttttagtcctatctccttatttccaactccagaaa 14654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 25534893 - 25535029
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtcct-taaactannnnnnnnnngc 178  Q
    ||||||| ||||||||| ||  |||||||||||| ||| ||||||| ||||| || ||||||||| |||||||| ||||  |||| ||          ||    
T  25534893 ttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatgttttttgc 25534992  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  25534993 agttttagtcctatctccctatttccaactccagaaa 25535029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 39010543 - 39010482
Alignment:
Q  102 ccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaa 162  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  39010543 ccattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaa 39010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 49720374 - 49720509
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||  ||||||||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||| ||          |||    
T  49720374 ttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgttttttgca 49720473  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||| |||||| |||||||||||    
T  49720474 gttttagtcctatctccttatttctaactccagaaa 49720509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 49952089 - 49951954
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||| ||  ||||||||||||||||||||| || || || || ||||||||| |||||||| ||| ||||||||          |||    
T  49952089 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgttttttgca 49951990  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  49951989 gttttagtcatatctccctattttcaactccagaaa 49951954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 51828640 - 51828678
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51828640 gcagttttagtcctatctccctatttccaactccagaaa 51828678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 2044282 - 2044409
Alignment:
Q  89 acttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagt 187  Q
    ||||||||||||  |||||||||||||||| |||||| ||| || || ||||||||| |||||||| |||| |||| ||          | |||||||||    
T  2044282 acttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgttttttggagttttagt 2044381  T
Q  188 cctatctccctatttccaactccagaaa 215  Q
    | |||||||||||||||||||| |||||    
T  2044382 catatctccctatttccaactcaagaaa 2044409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 46013425 - 46013560
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||  ||||||||||||||||||||| || || || || ||||||||| |||||||| |||| |||| ||          |||    
T  46013425 ttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgttttttgca 46013524  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  46013525 gttttagtcatatctccctattttcaactccagaaa 46013560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 52375330 - 52375465
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||| ||||| ||||||||||| || || || ||||||||  |||||||| |||| |||||||          |||    
T  52375330 ttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatgttttttgca 52375429  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||| ||||||||||||||| |||||||||||    
T  52375430 gttttagttctatctccctatttctaactccagaaa 52375465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 30513725 - 30513810
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| | ||||||| ||  ||||||||| ||||||||||||| ||||||||||||||||||| || ||||| || |||||||||    
T  30513725 ttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgt-cttaaacta 30513810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 44676475 - 44676610
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||| |||||| |||| || || || || ||||||||| |||||||  |||| |||||||          |||    
T  44676475 ttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatgttttttgca 44676574  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    | |||||||||||||||||||||||||||| |||||    
T  44676575 gctttagtcctatctccctatttccaactcaagaaa 44676610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 52236819 - 52236992
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||||| || ||  |||||||| ||| ||||||||||| || || || ||||||||| |||||||| |||| |||||||          |||    
T  52236819 ttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 52236918  T
Q  180 gttttagtcctatctccctatttccaactccaga----------aatgacagttttaatccaatcacctatgct 243  Q
    ||||||||| |||| |||||||| ||||||||||          ||||||||||||| ||||||||||||||||    
T  52236919 gttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 52236992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 16701235 - 16701201
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||| ||||||||||||||||||||||    
T  16701235 gcagttttagtcatatctccctatttccaactcca 16701201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 41998771 - 41998693
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtcc 158  Q
    ||||||| ||||||||| ||  |||||||||||||| |||||| | |||||| || ||||||||| |||||||| ||||    
T  41998771 ttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 41998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 39010078 - 39010163
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaact 165  Q
    ||||||| | ||||||| ||  ||||||||||||||||| ||| || || || || ||||||||| ||||||||||| ||||||||    
T  39010078 ttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaact 39010163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 43222415 - 43222479
Alignment:
Q  103 cattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||||||||||||||||| ||  | ||| ||||||||| |||||||| |||| |||||||    
T  43222415 cattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaacta 43222479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 9181535 - 9181670
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  9181535 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatattttttttgca 9181634  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  9181635 gttttagtcctatctccctatttccaactccagaaa 9181670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 25637741 - 25637606
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 25637642  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  25637641 gttttagtcctatctccctatttccaactccagaaa 25637606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 15712368 - 15712503
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||          | |    
T  15712368 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttgta 15712467  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||| |||||    
T  15712468 gttttagtcctatctccctatttccaactctagaaa 15712503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 7733030 - 7732893
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||          |||    
T  7733030 ttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 7732931  T
Q  180 gttttagtcctatctccctatttccaactccagaaatg 217  Q
     |||||||||||||||||||||| |||||||| |||||    
T  7732930 attttagtcctatctccctattttcaactccataaatg 7732893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 48248135 - 48247999
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||           ||    
T  48248135 ttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 48248036  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||| |||||||||||||||||||||||||    
T  48248035 agttttagtcccatctccctatttccaactccagaaa 48247999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 27245747 - 27245612
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    |||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||          |||    
T  27245747 ttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatgtattttgca 27245648  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
     |||||||| ||||||||||||||||||||||||||    
T  27245647 attttagtcatatctccctatttccaactccagaaa 27245612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 11971337 - 11971423
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  11971337 ttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 11971423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 5333883 - 5334046
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||  |||||||||||||||||||||||| || || || ||||||||| |||||||| |||| |||||||          |||    
T  5333883 ttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 5333982  T
Q  180 gttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| |||||  |||||||||    
T  5333983 gttttagtcatatccccctatttcctactccagaaatgacagttttagtccaactacctatgct 5334046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 5745642 - 5745777
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||  | |||||||||          |||    
T  5745642 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatgttttttgca 5745741  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  5745742 gttttagtcttatctccctatttcctactccagaaa 5745777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 16081302 - 16081433
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| || | ||||||||||||||| | ||||| |||||||||||||||||| |||||||| ||||||||||||          |||    
T  16081302 ttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttgttttttgca 16081401  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||| ||||||||||||||||    
T  16081402 gttttagtcctatctacctatttccaactcca 16081433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 28687596 - 28687731
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||||||||  || ||||||||||||||||||||||| || ||||||||| |||||| |||||||| ||||||||||||          |||    
T  28687596 ttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatattttttttgca 28687695  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||| ||||||||||| ||||||||||||||||||||    
T  28687696 gttctagtcctatcttcctatttccaactccagaaa 28687731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 74 - 215
Target Start/End: Complemental strand, 14311837 - 14311695
Alignment:
Q  74 aaaagagttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnn 172  Q
    |||||| ||||||| |||||| ||  ||||| |||||||||||||| |||||| |||||||||||||||||| |||||||| ||| ||||||||          
T  14311837 aaaagaattaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgtt 14311738  T
Q  173 nnnngcagttttagtcctatctccctatttccaactccagaaa 215  Q
        |||||||||||| |||||||||||||||||||| |||||    
T  14311737 ttttgcagttttagtcttatctccctatttccaactctagaaa 14311695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 786785 - 786917
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||| | || |||||||||||||||||||||||| ||| || |||||||||||| ||||||||| |||||||||||           ||    
T  786785 ttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgtttttttgc 786884  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||||    
T  786885 agttttagtcctatctccctatttccaactcca 786917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 16917716 - 16917802
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||  |||||||||||    
T  16917716 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 16917802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 26047960 - 26048046
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||    
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaacta 26048046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 26048465 - 26048353
Alignment:
Q  105 ttttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccctatttc 203  Q
    ||||||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||||    
T  26048465 ttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaacta-tatgtttttgcagttttagtcatatctccctatttc 26048367  T
Q  204 caactccagaaatg 217  Q
    |||||||| |||||    
T  26048366 caactccaaaaatg 26048353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 7732491 - 7732622
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||| ||  |||||||| |||||||||||| || ||||| || ||||||||| |||||||| ||||||||||||          |||    
T  7732491 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 7732590  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||| ||||||||    
T  7732591 gttttagtcctatctccctattttcaactcca 7732622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 16081842 - 16081711
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| || |||||| ||  ||||||||||||||||||||| || ||||| || ||||||||| ||||||||  ||| |||||||          |||    
T  16081842 ttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgttttttgca 16081743  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||||||||||||    
T  16081742 gttttagtcctatctccctatttccaactcca 16081711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 26026861 - 26026730
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||| |||||||| || |||||||||| |||||||||||| |||||| |||||||   |||||||||||          |||    
T  26026861 ttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatgttttttgca 26026762  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||  ||||||||||||||||||||||    
T  26026761 gttttagttttatctccctatttccaactcca 26026730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 5334362 - 5334276
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| |||||| || ||||||||| |||||||| |||| |||||||    
T  5334362 ttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaacta 5334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 215
Target Start/End: Complemental strand, 28688020 - 28687907
Alignment:
Q  103 cattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccctatt 201  Q
    ||||||||||||||||||||| || || || || ||||||||| |||||||| |||| |||||||          ||| |||||||||||||| ||||||    
T  28688020 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcacttttagtcctatcttcctatt 28687921  T
Q  202 tccaactccagaaa 215  Q
    ||||||||||||||    
T  28687920 tccaactccagaaa 28687907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 787329 - 787243
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||   |||||||||||||||||||||| |||||| || ||||||||| |||||||| |||| |||||||    
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 787243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 25637200 - 25637336
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnn-gc 178  Q
    ||||||| ||||||||| ||  ||| |||||||||||| |||| || ||||| || ||||||||| |||||||| |||| |||||||           |     
T  25637200 ttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgt 25637299  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  25637300 agttttagtcctatctccctatttccaactccagaaa 25637336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 27245206 - 27245342
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | |||||| || ||||||||| |||||||| ||||  |||| |           ||    
T  27245206 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttttttgc 27245305  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27245306 agttttagtcctatctccttatttccaactccagaaa 27245342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 39388811 - 39388679
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaa-atgtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||  |||||||||||||||||||||  ||||||| || ||||||||| |||||||| |||  |||||||           ||    
T  39388811 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttttgc 39388712  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||| ||||||||    
T  39388711 agttttagtcctatctccctattttcaactcca 39388679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 9181854 - 9181817
Alignment:
Q  178 cagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9181854 cagttttagtcctatctccctatttccaactccagaaa 9181817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 35161342 - 35161213
Alignment:
Q  84 attatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngcagt 181  Q
    |||| ||||||||| ||  |||||||||||||||||| || | |||||| || ||||||||| |||||||| |||| |||||||           |||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  182 tttagtcctatctccctatttccaactcca 211  Q
    ||||||| ||||||||||||||||||||||    
T  35161242 tttagtcatatctccctatttccaactcca 35161213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 48247590 - 48247673
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaa 163  Q
    ||||||| ||||||||| ||  |||||||| |||||||||||| | |||||| || |||||||||||||||||| |||| ||||    
T  48247590 ttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaa 48247673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 24929749 - 24929715
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||||||    
T  24929749 gcagttttagtcctatctccctatttccaactcca 24929715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 24929851 - 24929765
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| | ||||||| ||  ||||||||||||||||||||| || || || || |||||||||||||||||| |||| |||||||    
T  24929851 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaacta 24929765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 34595315 - 34595229
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| |||||   | ||||||||| |||||||| |||| |||||||    
T  34595315 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaacta 34595229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 2758241 - 2758106
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||||  |||||||||||||| || ||| || ||||||||| |||||||| |||| |||||||          |||    
T  2758241 ttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgca 2758142  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    | ||||||| |||| ||||||||| |||||||||||    
T  2758141 ggtttagtcatatccccctatttctaactccagaaa 2758106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 35160664 - 35160701
Alignment:
Q  89 acttttggttctaccattttgaccaactcacgaaaatg 126  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  35160664 acttttggtcctaccattttgaccaactcacgaaaatg 35160701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 26026418 - 26026456
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  26026418 gcagttttagtcttatctccctattttcaactccagaaa 26026456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 48247691 - 48247725
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||| ||||||||||||||||||||||    
T  48247691 gcagttttagtcatatctccctatttccaactcca 48247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 11971439 - 11971476
Alignment:
Q  178 cagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||| || |||||    
T  11971439 cagttttagtcctatctccctatttccaattctagaaa 11971476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 14311417 - 14311450
Alignment:
Q  178 cagttttagtcctatctccctatttccaactcca 211  Q
    |||||||| |||||||||||||||||||||||||    
T  14311417 cagttttaatcctatctccctatttccaactcca 14311450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 40669751 - 40669706
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg 126  Q
    ||||||| ||||||| | || |||||||||||||||||||||||||    
T  40669751 ttaattacacttttgatccttccattttgaccaactcacgaaaatg 40669706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 5184498 - 5184534
Alignment:
Q  181 ttttagtcctatctccctatttccaactccagaaatg 217  Q
    |||||||| |||||||||||||||||||||| |||||    
T  5184498 ttttagtcttatctccctatttccaactccaaaaatg 5184534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 35160906 - 35160938
Alignment:
Q  181 ttttagtcctatctccctatttccaactccaga 213  Q
    |||||||||||||||||||||| ||||||||||    
T  35160906 ttttagtcctatctccctattttcaactccaga 35160938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 34789385 - 34789520
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  34789385 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 34789484  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||| |||||||||||    
T  34789485 gttttagtcctatctccctatttcaaactccagaaa 34789520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 215
Target Start/End: Complemental strand, 54441118 - 54440977
Alignment:
Q  75 aaagagttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnn 173  Q
    ||||| ||||||| ||||||||| |||||||||||| || |||||||||||| |||||||||||||||||| |||||||| ||||||||||||           
T  54441118 aaagacttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 54441019  T
Q  174 nnngcagttttagtcctatctccctatttccaactccagaaa 215  Q
       |||||||||||||||||||||||||||||||||||||||    
T  54441018 tttgcagttttagtcctatctccctatttccaactccagaaa 54440977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 28465624 - 28465493
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  28465624 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 28465525  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
     |||||||||||||||||||||||||||||||    
T  28465524 attttagtcctatctccctatttccaactcca 28465493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 14440371 - 14440236
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||  |||||||||||          |||    
T  14440371 ttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgttttttgca 14440272  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| |||||||||||||||||||| |||||    
T  14440271 gttttagtcatatctccctatttccaactctagaaa 14440236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 46736658 - 46736793
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||          |||    
T  46736658 ttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 46736757  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    | |||| |||||||||||||||| ||||||||||||    
T  46736758 gatttaatcctatctccctattttcaactccagaaa 46736793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 56077867 - 56077732
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||          |||    
T  56077867 ttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 56077768  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||| |||||    
T  56077767 gttttagtcctatctccctatttccaactctagaaa 56077732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 208
Target Start/End: Original strand, 28166007 - 28166135
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||          |||    
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatattttttttgca 28166106  T
Q  180 gttttagtcctatctccctatttccaact 208  Q
    ||||||||||||||||||||||| |||||    
T  28166107 gttttagtcctatctccctattttcaact 28166135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 33778155 - 33777992
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||| | ||| || |||||||||||||||||| || | |||| ||          |||    
T  33778155 ttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatgttttttgca 33778056  T
Q  180 gttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatgct 243  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||    
T  33778055 gttttagttctatctccctatttccaactccataaatgacagttttagtccaaccacatatgct 33777992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 21034238 - 21034370
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnng-c 178  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||            |    
T  21034238 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttac 21034337  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||| ||||||||||||||||||||||    
T  21034338 agttttagtcatatctccctatttccaactcca 21034370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 45839092 - 45838955
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatgtcctatcttttttaaatcaaacaaaattgtccttaaacta---nnnnnnnnnng 177  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||||||||             |    
T  45839092 ttaattacacttttggtcctactattttgaccaactcacgaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttttg 45838993  T
Q  178 cagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  45838992 cagttttagtcctatcttcctatttccaactccagaaa 45838955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 26974286 - 26974422
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| |||||||||| || ||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||            |    
T  26974286 ttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttac 26974385  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  26974386 agttttagtcctatctccctatttccaactccagaaa 26974422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 12593027 - 12593162
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||| ||| || |||||||||||| |||||||| ||||||||||||          |||    
T  12593027 ttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 12593126  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
     ||||| |||||||||||||||| ||||||||||||    
T  12593127 attttaatcctatctccctattttcaactccagaaa 12593162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 241
Target Start/End: Original strand, 33777635 - 33777796
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||| || ||| ||||| ||||| |||||||| ||||||||||||          |||    
T  33777635 ttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatgttttttgca 33777734  T
Q  180 gttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatg 241  Q
     ||||| ||||||||| | |||| |||||||| |||||| ||||||| ||||| ||||||||    
T  33777735 attttaatcctatctctccattttcaactccataaatgagagttttagtccaaccacctatg 33777796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 6617183 - 6617044
Alignment:
Q  103 cattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccctatt 201  Q
    ||||||||| ||||||||||| || ||||| || ||||||||| || ||||| |||| |||||||          ||||||||||||||||||||||||     
T  6617183 cattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatattttttttgcagttttagtcctatctccctatc 6617084  T
Q  202 tccaactccagaaatgacagttttaatccaatcacctatg 241  Q
    ||||||||||||||||||||||||| ||||| | ||||||    
T  6617083 tccaactccagaaatgacagttttagtccaaccgcctatg 6617044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 14439831 - 14439966
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||| ||  ||||||||||||||||||||| || || || ||||||||||| ||||||||| |||| |||||||          |||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgttttttgca 14439930  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  14439931 gttttagtcctatctccctatttccaactccagaaa 14439966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 41114168 - 41114297
Alignment:
Q  89 acttttggttctaccattttgaccaactcacgaaaa-tgtcctatcttttttaaatcaaacaaaattgtccttaaac--tannnnnnnnnngcagtttta 185  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||  ||||||||||  ||          |||||||||    
T  41114168 acttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgttttttttgcagtttta 41114267  T
Q  186 gtcctatctccctatttccaactccagaaa 215  Q
    ||| |||||||||||||||||||| |||||    
T  41114268 gtcatatctccctatttccaactctagaaa 41114297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 36168874 - 36168737
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||||  ||||||||| | |||||| ||          ||     
T  36168874 ttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatgttttttgcg 36168775  T
Q  180 gttttagtcctatctccctatttccaactccagaaatg 217  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  36168774 gttttagtcctatctccctattttcaactccataaatg 36168737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 54440565 - 54440709
Alignment:
Q  72 taaaaagagttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnn 170  Q
    |||||||| ||||||| ||||||||| ||  ||||||||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||||||        
T  54440565 taaaaagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta--tg 54440662  T
Q  171 nnnnnngcagttttagtcctatctccctatttccaactccagaaatg 217  Q
          |||||||||||||||||||||||||| ||||| ||||||||    
T  54440663 ttttttgcagttttagtcctatctccctattttcaacttcagaaatg 54440709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 6616675 - 6616761
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||| ||| ||| ||||||||||| |||||||| ||||||||||||    
T  6616675 ttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaacta 6616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 24851319 - 24851405
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||| || |||||||||||||||  |||||||| ||||||||||||    
T  24851319 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaacta 24851405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 34789926 - 34789794
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | |||||| || ||||||||| ||||||||||||| |||||||           ||    
T  34789926 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 34789827  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||||    
T  34789826 agttttagtcctatctccctatttccaactcca 34789794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 28465084 - 28465219
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||||| || || ||||||||||||||| |||||| || ||||| || ||||||||| |||||||| ||||||||||||          |||    
T  28465084 ttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 28465183  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  28465184 gttttagtcatatctccctattttcaactccagaaa 28465219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 34807682 - 34807551
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||| |||||||  ||  ||||||| ||||||||||||||  | ||||||||||||| || |||||||| ||||||||||||          |||    
T  34807682 ttaattatatttttggtcttattattttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatgtttttggca 34807583  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||||||||||||    
T  34807582 gttttagtcctatctccctatttccaactcca 34807551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 24852009 - 24851873
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| || ||||| || ||||||||| |||||||| |||| |||||||           ||    
T  24852009 ttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 24851910  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||  |||||||||||||||||||    
T  24851909 agttttagtcctatctttctatttccaactccagaaa 24851873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 41608958 - 41608872
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| | |||||| || ||||||||| |||||||| || |||||||||    
T  41608958 ttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaacta 41608872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 1397598 - 1397683
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaact 165  Q
    ||||||| ||||||| | | ||||||||||||||||||  |||||| |||||||||||||||||| |||||||| |||||||||||    
T  1397598 ttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 12593566 - 12593431
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| || || || || ||||||||| |||||||| |||  |||||||          |||    
T  12593566 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatatattttttgca 12593467  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12593466 gttttagtcctatctccctattttcaactccagaaa 12593431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 16215038 - 16214903
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||||||||||| ||| |||||||| ||||| ||||||||| || ||||||||||||||  || ||||| ||||||||||||          |||    
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatatattttttgca 16214939  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||| | |||||| ||||||| ||||||||||||    
T  16214938 gttttaattctatcttcctattttcaactccagaaa 16214903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 46737198 - 46737063
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||||||          |||    
T  46737198 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 46737099  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||| ||||| ||||||||||||||    
T  46737098 gttttagtcatatcttcctatctccaactccagaaa 46737063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 33689832 - 33689966
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||| ||| || ||||| || ||||||||| |||||||| ||||||||||||          |||    
T  33689832 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaacta-tatgtttttgca 33689930  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  33689931 gttttagtcatatctccctatttacaactccagaaa 33689966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 21034780 - 21034644
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnn-gc 178  Q
    ||||||| | ||||||| ||  ||||||||||||||||||||| || |||||||| ||||||||| |||||||| |||| | |||||           ||    
T  21034780 ttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttttttgc 21034681  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| |||||||||||||||||||||||||||    
T  21034680 agttttagttctatctccctatttccaactccagaaa 21034644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 35643577 - 35643644
Alignment:
Q  100 taccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||  || ||||| ||||||||||||    
T  35643577 taccattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaacta 35643644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 19528872 - 19529008
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnn-gc 178  Q
    ||||||| ||||||||| ||  |||||||||||| |||||||| || ||||| || ||||||||| || ||||| |||| |||||||           ||    
T  19528872 ttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgtttttttgc 19528971  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||| ||||    
T  19528972 agttttagtcctatctccctatttccaactccggaaa 19529008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 24851565 - 24851603
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaa 24851603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 34807217 - 34807255
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34807217 gcagttttagtcctatctccatatttccaactccagaaa 34807255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 229702 - 229567
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||||||||  |  ||||||||||| |||||||||||| || |  || ||| |||||||||||||| ||||||||||||          |||    
T  229702 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatgtttttgca 229603  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||| ||||| |||| ||||| ||||||||||||    
T  229602 gttttaatcctacctccttattttcaactccagaaa 229567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 17504480 - 17504416
Alignment:
Q  103 cattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    |||||||| || |||||||||||| |||||||| ||||||||| |||||||  ||||||||||||    
T  17504480 cattttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaacta 17504416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 35644004 - 35643968
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccaga 213  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35644004 gcagttttagtcttatctccctatttccaactccaga 35643968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 19529237 - 19529151
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||| | |||||||||||||||||| |  |||||| | |||||| ||||||||  |||||||| ||| ||||||||    
T  19529237 ttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaacta 19529151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 35643667 - 35643701
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||| ||||||||    
T  35643667 gcagttttagtcctatctccctatttacaactcca 35643701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 36168432 - 36168470
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  36168432 gcagttttagtcttatctccctatttctaactccagaaa 36168470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 55677399 - 55677369
Alignment:
Q  181 ttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||    
T  55677399 ttttagtcctatctccctatttccaactcca 55677369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 55677501 - 55677415
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||   |||||||||||||||||||| | |||||| || ||||||||| |||||||| |||  |||||||    
T  55677501 ttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaacta 55677415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 38008494 - 38008363
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  38008494 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 38008395  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||||||||||||    
T  38008394 gttttagtcctatctccctatttccaactcca 38008363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 11539640 - 11539776
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||           ||    
T  11539640 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 11539739  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  11539740 agttttagtcctatctccctatttccaactccagaaa 11539776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 20127739 - 20127875
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||           ||    
T  20127739 ttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 20127838  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||| |||||||    
T  20127839 agttttagtcctatctccctatttccaaccccagaaa 20127875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 33921155 - 33921019
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaact-annnnnnnnnngc 178  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| |          ||    
T  33921155 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttttttgc 33921056  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33921055 agttttagtcctatctccctatttccaactctagaaa 33921019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 16952938 - 16953024
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaa-tgtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||||    
T  16952938 ttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaacta 16953024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 17060909 - 17060995
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaa-tgtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||||    
T  17060909 ttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaacta 17060995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 43160554 - 43160418
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||| ||||||||||||           ||    
T  43160554 ttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttttttgc 43160455  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  43160454 agttttagtcctatctccctatttccaactccagaaa 43160418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 62960 - 63095
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||| |||| || |||||||||||||||||||||||| |||||| |||||| ||||| |||||||| ||||||||||||          |||    
T  62960 ttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgttttttgca 63059  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||| |||||    
T  63060 gttttagtcctatctccctatttccaactcaagaaa 63095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 243
Target Start/End: Complemental strand, 13399944 - 13399790
Alignment:
Q  99 ctaccattttgaccaactcacgaaaatgtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccct 198  Q
    ||||||||||||||||||||||||||||  |||| | ||||||||| |||||||||||||||||||||          |||||||||||| |||||||||    
T  13399944 ctaccattttgaccaactcacgaaaatggtctatttcttttaaatcgaacaaaattgtccttaaactatatattttttgcagttttagtcatatctccct 13399845  T
Q  199 atttccaactcc----------agaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||||||          |||||||||||||||||||||| ||||||||||    
T  13399844 atttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgct 13399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 44219647 - 44219782
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| || ||||||||| |||||||| |||||| ||||| |||||||||||| |||||||||||||||||| ||          |||    
T  44219647 ttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgttttttgca 44219746  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44219747 gttttagtcctatctccctgtttccaactccagaaa 44219782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 4809422 - 4809294
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||  |||||| | ||||||||||||          |||    
T  4809422 ttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatgttttttgca 4809323  T
Q  180 gttttagtcctatctccctatttccaact 208  Q
    |||||||||||||||||||||||||||||    
T  4809322 gttttagtcctatctccctatttccaact 4809294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 13315496 - 13315634
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta---nnnnnnnnnn 176  Q
    ||||||| |||||| || |||||||||||||||||||| |||||| ||| ||||||||||||||| |||||||| ||||||||||||                 
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 13315595  T
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13315596 gcagttttagtcctatctccctatttccaactccagaaa 13315634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 4356299 - 4356164
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||| ||||||||||||||||||| ||| ||| ||||||||||||||| |||||||| ||||||||||||          |||    
T  4356299 ttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 4356200  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||| | |||| ||||||||||||||||||||||    
T  4356199 gttttaattctatttccctatttccaactccagaaa 4356164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 20128280 - 20128145
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||| |||||||||||||| || ||||| || |||||||||||||||||| ||||||||||||          |||    
T  20128280 ttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgttttttgca 20128181  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
     |||||||||||||||||||||||||||||||||||    
T  20128180 attttagtcctatctccctatttccaactccagaaa 20128145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 42192243 - 42192378
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| |||||| || ||||||||| |||||||| |||| |||||||          |||    
T  42192243 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 42192342  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||| |||||||||||    
T  42192343 gttttagtcctatctccctatttctaactccagaaa 42192378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 215
Target Start/End: Complemental strand, 11540199 - 11540046
Alignment:
Q  65 ttaatattaaaaagag--ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtcctta 161  Q
    ||||||||||||| ||  |||||||||||||||||  |  ||||||||||||||||||||||| |||||| || ||||||||| |||||||| |||| ||    
T  11540199 ttaatattaaaaataggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccata 11540100  T
Q  162 aactannnnnnnnnngcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||          |||||||||||| ||| ||||||||||||||||||||||    
T  11540099 aactatatgttttttgcagttttagtcatatatccctatttccaactccagaaa 11540046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 241
Target Start/End: Complemental strand, 32418689 - 32418529
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||||||||||| ||| |||||||||||| |||||||| || | ||| || ||||||||| |||||||| ||||||||||||          |||    
T  32418689 ttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatatattttttgca 32418590  T
Q  180 gttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatg 241  Q
    |||||| || |||||||||||||||||||| ||||| | |||||||| ||||| ||||||||    
T  32418589 gttttaatcttatctccctatttccaactctagaaacg-cagttttagtccaaccacctatg 32418529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 5560054 - 5560140
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||| ||||||||||||    
T  5560054 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaacta 5560140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 6949454 - 6949586
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| | ||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||| |||||||| |||||| |||||           ||    
T  6949454 ttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttttttgc 6949553  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||||    
T  6949554 agttttagtcctatctccctatttccaactcca 6949586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 6949987 - 6949822
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnn--g 177  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| || |||||  | ||||||||  |||||||| |||| |||||||            |    
T  6949987 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatattttttttttg 6949888  T
Q  178 cagttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||    
T  6949887 cagttttagtcctatctccatatttcaaactccagaaatgacagttttagtccaaccacctatgct 6949822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 15551218 - 15551082
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||  ||||||||||||||||||||| ||||| ||| ||| ||||||||||| |||||||| ||||||||  ||           ||    
T  15551218 ttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttttttgc 15551119  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  15551118 agttttagtcctatctccctatttccaactccagaaa 15551082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 24140217 - 24140087
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||  ||| |||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||          |||    
T  24140217 ttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaacta-----tatttgca 24140123  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||| |||| ||||||||||||||||||||||    
T  24140122 gttttagttctatatccctatttccaactccagaaa 24140087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 649880 - 649801
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtcct 159  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||| |||||    
T  649880 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcct 649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 43216228 - 43216115
Alignment:
Q  105 ttttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccctatttc 203  Q
    ||||||||||||||||||| || ||||| || ||||||||| |||||||| |||| |||||||          ||||||||||||||||||| |||||||    
T  43216228 ttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgcagttttagtcctatctctctatttc 43216129  T
Q  204 caactccagaaatg 217  Q
    ||||||||||||||    
T  43216128 caactccagaaatg 43216115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 4808881 - 4809017
Alignment:
Q  80 gttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngc 178  Q
    |||||||| | |||| |||||  ||||||||||||||||||||| || ||||| || ||||||||| |||||||| |||| |||||||          |     
T  4808881 gttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgt 4808980  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||| ||||||||||||||||||||    
T  4808981 agttttagtcctatcttcctatttccaactccagaaa 4809017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 33920614 - 33920750
Alignment:
Q  80 gttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngc 178  Q
    |||||||| | ||||||| ||  ||||||||||||||||||||| || || || || ||||||||| |||||||| |||| |||||||          ||    
T  33920614 gttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgatttttgc 33920713  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33920714 agttttagtcctatctccctattttcaactccagaaa 33920750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 42192786 - 42192650
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| |||||| || ||||||||| |||||||| |||| |||||||           ||    
T  42192786 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgtttttttgc 42192687  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||| |||| |||||||||||||||||||||    
T  42192686 agttttagtcatatccccctatttccaactccagaaa 42192650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 4355758 - 4355893
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||||||| |||||||||| || || || || ||||||||| |||||||| |||| |||||||          |||    
T  4355758 ttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 4355857  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4355858 gttttagtcctatctccctattttcaactccagaaa 4355893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 16175892 - 16175757
Alignment:
Q  82 taattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnn-gca 179  Q
    |||||| ||||||||| ||  |||||| |||||||||||||| || || || || ||||||||| |||||||| ||||||||||||           |||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttttgca 16175793  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  16175792 gttttagtcctatctccctatttccaactccagaaa 16175757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 16953477 - 16953346
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||||||||||||| |||| || ||||| || ||||||||| ||||||| ||||| |||| ||          |||    
T  16953477 ttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgttttttgca 16953378  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||||||||||||    
T  16953377 gttttagtcctatctccctatttccaactcca 16953346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 44220188 - 44220051
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||||| || ||  |||||||||||||||||||||||| || || ||||||||||||||||||||| |||| |||||||          | |    
T  44220188 ttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatgttttttgta 44220089  T
Q  180 gttttagtcctatct--ccctatttccaactccagaaa 215  Q
    ||||||||| |||||  |||||||||||||||||||||    
T  44220088 gttttagtcatatctccccctatttccaactccagaaa 44220051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 63507 - 63421
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||| ||||||| ||   |||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||| |||||||    
T  63507 ttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 63421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 38007953 - 38008085
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||||||           ||    
T  38007953 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 38008052  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||| ||||||||||||||||||||||    
T  38008053 agttttagtcatatctccctatttccaactcca 38008085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 649530 - 649665
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||| |||||||||| |||||| || ||||| || ||||||||| |||||||| |||| |||||||          |||    
T  649530 ttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 649629  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||| || ||||||||||||||||||||||||    
T  649630 gttttagttctgtctccctatttccaactccagaaa 649665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 5560996 - 5560958
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5560996 gcagttttagtcctatctccctatttccaactccagaaa 5560958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 13399522 - 13399560
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13399522 gcagttttagtcctatctccctatttccaactccagaaa 13399560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 9329915 - 9329974
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatctttttt 139  Q
    ||||||| ||||||||| |||| |||||||||||||||| ||||| ||||||||||||||    
T  9329915 ttaattacacttttggtcctacaattttgaccaactcacaaaaatggtcctatctttttt 9329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 15550676 - 15550812
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||| | ||  |||| |||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||||||           ||    
T  15550676 ttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 15550775  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  15550776 agttttagtcctatttccctattttcaactccagaaa 15550812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 20495204 - 20495282
Alignment:
Q  89 acttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||||||||  |||||||||||||||||||||||| || |  || ||||||||| |||||||| |||| |||||||    
T  20495204 acttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaacta 20495282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 32418162 - 32418295
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||| |||| ||  ||||||||||||||||||||| || ||||| || |||  |||| |||||||| |||| |||||||          |||    
T  32418162 ttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatatattttttgca 32418259  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||| ||||||||||||||||||    
T  32418260 gttttagtcatatctccttatttccaactccagaaa 32418295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 43160110 - 43160148
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  43160110 gcagttttagtcctatctccctattttcaactccagaaa 43160148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 25336143 - 25336060
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaa 163  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | ||||||  | ||||||||| |||||||| |||| ||||    
T  25336143 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaa 25336060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 63404 - 63366
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  63404 gcagttttagtcctatcttcctatttccaactctagaaa 63366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 9330338 - 9330260
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaa-atgtcctatcttttttaaatcaaacaaaattgtcc 158  Q
    ||||||| ||||||||| ||  |||||||||||||||||||||  |||| || || ||||||||| |||||||| ||||    
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtcc 9330260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 44219787 - 44219820
Alignment:
Q  210 cagaaatgacagttttaatccaatcacctatgct 243  Q
    ||||||||||||||||| ||||||||||||||||    
T  44219787 cagaaatgacagttttagtccaatcacctatgct 44219820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 24640728 - 24640598
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||          |||    
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 24640629  T
Q  180 gttttagtcctatctccctatttccaactcc 210  Q
    ||||||||| |||||||||||||||||||||    
T  24640628 gttttagtcttatctccctatttccaactcc 24640598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 5114471 - 5114606
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||| | |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||          |||    
T  5114471 ttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 5114570  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  5114571 gttttagtcctatctccctatttccaactccagaaa 5114606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 25472556 - 25472420
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||           ||    
T  25472556 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 25472457  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||| |||||||||    
T  25472456 agttttagtcctatctccctatttccagctccagaaa 25472420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 31573723 - 31573863
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtccta-tcttttttaaatcaaacaaaattgtccttaaacta----nnnnnnnn 174  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||||| |||||||| || |||||||||                
T  31573723 ttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatgtttttttt 31573822  T
Q  175 nngcagttttagtcctatctccctatttccaactccagaaa 215  Q
      |||||||||||||||||||||||||||||||||||||||    
T  31573823 ttgcagttttagtcctatctccctatttccaactccagaaa 31573863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 31073685 - 31073550
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||| ||||||||| || || || || ||||||||| ||||||||||||| |||||||          |||    
T  31073685 ttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgtgca 31073586  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  31073585 gttttagtcctatctccctatttccaactccagaaa 31073550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 30251235 - 30251099
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||| | |||| |||||||||||||||| ||||| ||| ||||||||||||||| |||||||| ||||||||||||           |     
T  30251235 ttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtatttttgt 30251136  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||| ||||||||||||||||||||||||||    
T  30251135 agttttagtcttatctccctatttccaactccagaaa 30251099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 5121012 - 5120881
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatgt-cctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | | |||| || ||||||||| |||||||| |||| |||||||          |||    
T  5121012 ttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 5120913  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||||||||||||    
T  5120912 gttttagtcctatctccctatttccaactcca 5120881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 31574268 - 31574133
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | ||| || || ||||||||| |||||||| |||| |||||||          |||    
T  31574268 ttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 31574169  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  31574168 gttttagtcatatctccctattttcaactccagaaa 31574133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 29891627 - 29891488
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatctttttta----aatcaaacaaaattgtccttaaactannnnnnnnn 175  Q
    ||||||| ||||||||| |||||||||||||||||||  ||||||| |||| | || ||||    |||  |||||||| ||||||||||||             
T  29891627 ttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtccttttttatttatttaaattgaacaaaatcgtccttaaactatatgttttt 29891528  T
Q  176 ngcagttttagtcctatctccctatttccaactccagaaa 215  Q
     |||||||||||||||||||||||||||||||||||||||    
T  29891527 tgcagttttagtcctatctccctatttccaactccagaaa 29891488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 31073250 - 31073313
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctat 240  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||| |||||||    
T  31073250 gcagttttagtcatatcttcctatttccaactccagaaacgacagttttagtccaaccacctat 31073313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 25468852 - 25468938
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | ||| ||||| ||||||||| |||||||| |||| |||||||    
T  25468852 ttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaacta 25468938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 28636642 - 28636604
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  28636642 gcagttttagtcttatctccctatttccaactccagaaa 28636604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 31073146 - 31073219
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaat 153  Q
    ||||||| ||||||||| ||   |||||||||||| || ||||||| |||||||||||||||||| ||||||||    
T  31073146 ttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaat 31073219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 28636391 - 28636431
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaatg 217  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  28636391 gcagttttagtcatatctccctatttccaactccataaatg 28636431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 31242831 - 31242887
Alignment:
Q  103 cattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtcc 158  Q
    |||||||||||||||||||||||| ||||  |||||||||||| |||| || |||||    
T  31242831 cattttgaccaactcacgaaaatgatcctgccttttttaaatcgaacataactgtcc 31242887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 9992157 - 9992293
Alignment:
Q  81 ttaattatacttttggttctaccatttt-gaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngc 178  Q
    ||||||| ||||||||| |||||||||| |||||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||          ||    
T  9992157 ttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgttttttgc 9992256  T
Q  179 agttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  9992257 agttttagtcctatctccctatttccaactccagaaa 9992293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 34555925 - 34555788
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaac--tannnnnnnnnng 177  Q
    ||||||| |||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||  ||          |    
T  34555925 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttg 34555826  T
Q  178 cagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  34555825 cagttttagtcatatctccctatttccaactccagaaa 34555788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 241
Target Start/End: Complemental strand, 29439457 - 29439303
Alignment:
Q  89 acttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaac--tannnnnnnnnngcagtttta 185  Q
    ||||||||| | |||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||  ||          |||| ||||    
T  29439457 acttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcagattta 29439358  T
Q  186 gtcctatctccctatttccaactccagaaatgacagttttaatccaatcacctatg 241  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  29439357 gtcctatct-cctatttcaaactccagaaatgacagttttagtccaaccacctatg 29439303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 21938566 - 21938697
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| |||||||||  ||||||||||| ||||||||||||||| || ||||||||||||||| |||||||| |||| |||||||          |||    
T  21938566 ttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatgttttttgca 21938665  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||||||||||||    
T  21938666 gttttagtcctatctccctatttccaactcca 21938697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 218
Target Start/End: Original strand, 37505070 - 37505209
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnnnnnngc 178  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||||||| |||||||| ||||||||||||           ||    
T  37505070 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 37505169  T
Q  179 agttttagtcctatctccctatttccaactccagaaatga 218  Q
    |||||||||||||| ||||||||| |||||||| ||||||    
T  37505170 agttttagtcctatttccctattttcaactccaaaaatga 37505209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 30786774 - 30786906
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat--gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngc 178  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||  |||||| || ||||||||| |||||||| |||| |||||||          ||    
T  30786774 ttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc 30786873  T
Q  179 agttttagtcctatctccctatttccaactcca 211  Q
    |||||||||||||||||||||||||||||||||    
T  30786874 agttttagtcctatctccctatttccaactcca 30786906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 50305328 - 50305242
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  50305328 ttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 50305242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 10279090 - 10278958
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||           ||    
T  10279090 ttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt---ca 10278994  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||| ||| ||||||||||||||    
T  10278993 gttttagtcctatctccatatatccaactccagaaa 10278958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 44954769 - 44954634
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||||||||||||| ||||||| || || |||||||||||||||||||||  ||| |||||||          |||    
T  44954769 ttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatgttttttgca 44954670  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  44954669 gttttagtcctatctccctatttccaactccagaaa 44954634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 9992698 - 9992563
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||| |||||| ||||||| |||||||||||||||||| |||||||| || |||||||||          |||    
T  9992698 ttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatgttttttgca 9992599  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    || |||||||||||||||||||| ||||||||||||    
T  9992598 gtattagtcctatctccctattttcaactccagaaa 9992563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 16299224 - 16299090
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    |||||||||||||| || |||||||||||| |||||| ||||||| ||||||| |||||| |||  |||||||| ||||||||||||          |||    
T  16299224 ttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctat-tttttttaattgaacaaaatcgtccttaaactatatgttttttgca 16299126  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  16299125 gttttagtcctatctccatatttccaactccagaaa 16299090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 52336053 - 52335918
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    |||||||  |||||||||||| |||||||||||||||| |||| | |||||| || ||||||||| |||||||| |||| |||||||          |||    
T  52336053 ttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatattttttttgca 52335954  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||||||||||||||||    
T  52335953 gttttagtcatatctccctatttccaactccagaaa 52335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 1837508 - 1837643
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  |||||||| |||||||||||| || || ||||| ||||||||| ||||||||||||| |||||||          |||    
T  1837508 ttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgttttttgca 1837607  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  1837608 gttttagtcatatctccctattttcaactccagaaa 1837643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 37421488 - 37421401
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatc-ttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| |||||| ||  |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||    
T  37421488 ttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaacta 37421401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 17641920 - 17641772
Alignment:
Q  73 aaaaagagttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta----- 166  Q
    ||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||| ||| || || ||||||||| |||||||| |||| |||||||         
T  17641920 aaaaagatttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactattttt 17641821  T
Q  167 nnnnnnnnnngcagttttagtcctatctccctatttccaactccagaaa 215  Q
              |||||||||||||||||||||||||||||||||||||||    
T  17641820 atttttttttgcagttttagtcctatctccctatttccaactccagaaa 17641772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 44582602 - 44582516
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| ||| |||| |||| ||||| |||||||| ||| ||||||||    
T  44582602 ttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaacta 44582516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 10278545 - 10278687
Alignment:
Q  75 aaagagttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta-nnnnnn 172  Q
    ||||| ||||||| ||||||||| ||  ||||||||||||||||||||| || ||||| || ||||||||| |||||||| |||| |||||||           
T  10278545 aaagacttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttt 10278644  T
Q  173 nnnngcagttttagtcctatctccctatttccaactccagaaa 215  Q
        ||||||||||||||||||||| |||| ||||||||||||    
T  10278645 ttttgcagttttagtcctatctccccatttgcaactccagaaa 10278687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 30787341 - 30787255
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||| | ||||||||| || |||||||||||||| ||| ||||||||| ||||| |||||||| ||||||||||||    
T  30787341 ttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaacta 30787255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 2868251 - 2868116
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||| | ||  ||||||||||||| |||||||||| ||||| || ||||||||| |||||||| |||| || ||||          |||    
T  2868251 ttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatgttttttgca 2868152  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| |||| |||||||||||||||||||||    
T  2868151 gttttagtcatatccccctatttccaactccagaaa 2868116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 2867936 - 2868000
Alignment:
Q  103 cattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    |||||||||||||||||||||||| || ||||| ||||||||| |||||||||||| ||||||||    
T  2867936 cattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaacta 2868000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 37505610 - 37505480
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||| ||||||| ||   |||||||||||||||||||| || || ||||| ||||||| |||||||||| |||| |||||||          |||    
T  37505610 ttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaacta-tatgtttttgca 37505512  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||| ||||||||    
T  37505511 gttttagtcctatctccctattttcaactcca 37505480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 44954250 - 44954364
Alignment:
Q  102 ccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccctat 200  Q
    |||||||||||||||||||||||| ||| || |||||||||||| |||||||| ||| ||||| ||          |||||||||||| |||||| || |    
T  44954250 ccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgttttttgcagttttagtcgtatctctctgt 44954349  T
Q  201 ttccaactccagaaa 215  Q
    |||||||||||||||    
T  44954350 ttccaactccagaaa 44954364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 215
Target Start/End: Original strand, 23340208 - 23340321
Alignment:
Q  103 cattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccctatt 201  Q
    ||||||||||||||||||||| | ||||||||| ||||||||| |||||||| |  | |||||||          |||||||||||| ||||||| ||||    
T  23340208 cattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatatattttttgcagttttagtcatatctccttatt 23340307  T
Q  202 tccaactccagaaa 215  Q
    ||||||||||||||    
T  23340308 tccaactccagaaa 23340321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 17641403 - 17641503
Alignment:
Q  116 tcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccctatttccaactccagaa 214  Q
    ||||||||||| || || |||||||||||| ||||||||||| |||||||||          | ||||||||| ||||||||||||||||||||||||||    
T  17641403 tcacgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgttttttgtagttttagttctatctccctatttccaactccagaa 17641502  T
Q  215 a 215  Q
    |    
T  17641503 a 17641503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 29438933 - 29439019
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| | |||||| || ||||||||| |||||||| |||| |||||||    
T  29438933 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 29439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 444094 - 443963
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||||||||||| |  |  ||||||||||||||||||||| | ||| || || ||||||||| |||||||| || | |||||||          |||    
T  444094 ttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatgttttttgca 443995  T
Q  180 gttttagtcctatctccctatttccaactcca 211  Q
    ||||||||||||||||||||||||||| ||||    
T  443994 gttttagtcctatctccctatttccaattcca 443963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 8230184 - 8230049
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| | ||||||||||  |||||||||| | ||||||||||| |  || || ||||||||| |||||||| |||| |||||||          |||    
T  8230184 ttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 8230085  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||| |||| |||||||||||||||||||||    
T  8230084 gttttagtcatatccccctatttccaactccagaaa 8230049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 16298707 - 16298814
Alignment:
Q  103 cattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagtcctatctccctatt 201  Q
    ||||||||||||||||||||| | ||| || || ||||||||| |||||||| |||| |||||||          |||||||||||||||||| ||||||    
T  16298707 cattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatctacctatt 16298806  T
Q  202 tccaactc 209  Q
    ||||||||    
T  16298807 tccaactc 16298814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 34555482 - 34555519
Alignment:
Q  178 cagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34555482 cagttttagtcctatctccctatttccaactccagaaa 34555519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 4080026 - 4080159
Alignment:
Q  83 aattatacttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagt 181  Q
    ||||| ||||||||| ||  ||| ||||||||||||||||| || || || || ||||||||| |||||||| |||| |||||||           ||||    
T  4080026 aattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgttttttacagt 4080125  T
Q  182 tttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||| |||||||||||||||||||| |||||    
T  4080126 tttagtcatatctccctatttccaactctagaaa 4080159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 1744427 - 1744465
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  1744427 gcagttttagtcatatctccctatttccaactccagaaa 1744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 8229740 - 8229778
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  8229740 gcagttttagtcctatctccctatttctaactccagaaa 8229778  T

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Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 50304442 - 50304528
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||| ||| || || ||||||||| |||||||| |||  |||||||    
T  50304442 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaacta 50304528  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 39485068 - 39485202
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngca 179  Q
    ||||||| ||||||||| ||  ||||||||| | ||||||||||| |||||| || ||| ||||| |||||||| |||| |||||||          |||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgca 39485167  T
Q  180 gttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||||||| ||||||| ||||| ||||||    
T  39485168 gttttagtcctatct-cctattttcaacttcagaaa 39485202  T

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Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 45048158 - 45048244
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||  |||||||||||||| |||||||| || ||| || ||||||||  |||||||| |||| |||||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaacta 45048244  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 6224800 - 6224837
Alignment:
Q  178 cagttttagtcctatctccctatttccaactccagaaa 215  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaa 6224837  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 44582060 - 44582133
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaat 153  Q
    ||||||| ||||||||| ||  |||||||||||||| |||||| | |||||| || ||||||||| ||||||||    
T  44582060 ttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaat 44582133  T

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Target: scaffold0712 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 6403 - 6530
Alignment:
Q  89 acttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagt 187  Q
    ||||||||| |||||||||||| ||||||| ||||||| | |||||||||||||||| |||||||| ||||||||| ||          |||||||||||    
T  6403 acttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgttttttgcagttttagt 6502  T
Q  188 cctatctccctatttccaactccagaaa 215  Q
    ||||||| ||||||||||||| ||||||    
T  6503 cctatcttcctatttccaacttcagaaa 6530  T

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Target: scaffold0709 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 6421 - 6548
Alignment:
Q  89 acttttggttctaccattttgaccaactcacgaaaatg-tcctatcttttttaaatcaaacaaaattgtccttaaactannnnnnnnnngcagttttagt 187  Q
    ||||||||| |||||||||||| ||||||| ||||||| | |||||||||||||||| |||||||| ||||||||| ||          |||||||||||    
T  6421 acttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgttttttgcagttttagt 6520  T
Q  188 cctatctccctatttccaactccagaaa 215  Q
    ||||||| ||||||||||||| ||||||    
T  6521 cctatcttcctatttccaacttcagaaa 6548  T

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Target: scaffold0097 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 46811 - 46725
Alignment:
Q  81 ttaattatacttttggttctaccattttgaccaactcacgaaaat-gtcctatcttttttaaatcaaacaaaattgtccttaaacta 166  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||| ||| ||||||||    
T  46811 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaacta 46725  T

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Target: scaffold0097; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 46367 - 46407
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaatg 217  Q
    |||||||||||| ||||||||||||||||| |||| |||||    
T  46367 gcagttttagtcatatctccctatttccaattccataaatg 46407  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 78417 - 78457
Alignment:
Q  177 gcagttttagtcctatctccctatttccaactccagaaatg 217  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatg 78457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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