View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15409_low_13 (Length: 246)
Name: NF15409_low_13
Description: NF15409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15409_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 39475825 - 39476043
Alignment:
| Q |
1 |
tatggttaggttgaaaatgtggatttggtttggattgaatcaatcaatt-acatgagccaaataatcaatccc-ttaactcaacaaacgccaaagagtat |
98 |
Q |
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| T |
39475825 |
tatggttaggttgaaaatgtggatttggtttggattgaatcaatcaatttacatgagccaaataatcaatccccttaactcaacaaacgccaaagagtat |
39475924 |
T |
|
| Q |
99 |
ttgaattgaatttctattttagaaaagtacattttgttaaattgaggagaatcaaatctcaaac----------atatac-tctaaggtctcaagccaca |
187 |
Q |
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| T |
39475925 |
ttgaattgaatttctattttagaaaagtacattttgttaaattgaggagaatcaaatctcaaacattaaaagaaatatacttttaaggtctcaagccaca |
39476024 |
T |
|
| Q |
188 |
ccatcagaccaatataaga |
206 |
Q |
| |
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| T |
39476025 |
ccatcagaccaatataaga |
39476043 |
T |
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