View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15410_low_11 (Length: 306)
Name: NF15410_low_11
Description: NF15410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15410_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 295
Target Start/End: Complemental strand, 9949985 - 9949703
Alignment:
| Q |
13 |
aaagactcattaatgtatgatataaatattatgatgatggtcgtcatcatcaaaaacagaagtggcgttaatcatttgataaatttagaactatagttgg |
112 |
Q |
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| T |
9949985 |
aaagactaattaatgtatgatatgaatattatgatgacggtcgtcatcatcaaaaacagaagtggcgttaatcatttgataaatttagaactatagttgg |
9949886 |
T |
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| Q |
113 |
ttttgattcggacgaaagcaagtttaagaggattttggtggaagattgaaacaatatgtagcgtttgaacacatatcagtcgctatcttgaggttttaag |
212 |
Q |
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| T |
9949885 |
ttttgattcggacgaaagcaagtttaagaggattttggtggaagattgaaacaatatgtagcgtttgaacacatatcagtcgctatcttgaggttttaag |
9949786 |
T |
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| Q |
213 |
agaagtcaatgtattctagtaatttattatacatggtgcaaacaatgttttagagtagttccttttatgttattcctattcat |
295 |
Q |
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| T |
9949785 |
agaagtcaatgtattctagtaatttattatacatgctgcaaacaatgttttagagtagttccttttatgttattcctattcat |
9949703 |
T |
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