View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15410_low_14 (Length: 292)
Name: NF15410_low_14
Description: NF15410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15410_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 148972 - 148696
Alignment:
| Q |
1 |
catatgagagaataaaatctaagatcttgaggaggaacataatttaaggtcccaaaccatcactaacaagccaatccaagtggctttggattatggctaa |
100 |
Q |
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| T |
148972 |
catatgagagaataaaatctaagatcttgaggaggaacatactctaaggtcccaaaccatcactaaaaagccaatccaagtggctttgcattatggctaa |
148873 |
T |
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| Q |
101 |
tattattaataaaaatttcccccttttcctgttatttatttaagaaatgccacctaaaaaccaagactttgaaactttctttttaccttataaaacgtga |
200 |
Q |
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| T |
148872 |
tattattaataaaaatttcccccttttcctgttatttatttaagaaatgccacctaaaaactaagactttgaaactttctttttaccttataaaacgtga |
148773 |
T |
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| Q |
201 |
atctcaaatcgatccctattacttttttcaaatttgtatgttggtccctagaattttcaaaatttgataaatagacc |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
148772 |
atctcaaatcgatccctattacttttttcaaatttgtatgttggtccctagaattttcaaaatttgataaatagacc |
148696 |
T |
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