View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15410_low_2 (Length: 574)
Name: NF15410_low_2
Description: NF15410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15410_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 493; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 18 - 563
Target Start/End: Original strand, 44828492 - 44829036
Alignment:
| Q |
18 |
ataaaattagctgctcgtacgcaattaatacaacacatatcacaaagaaacttatatttgtaatacatattagaattaacaatcatcaaagctatattaa |
117 |
Q |
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| T |
44828492 |
ataaaattagctgctcatacgtaattaatacaacacatatcacaaagaaacttatttttgtaatacatattagaattaacaatcatcaaagctatattaa |
44828591 |
T |
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| Q |
118 |
tcttgtaaattactctacgttacctgaatttctgaactggtacctccgatgacatccttaacaatactcaacacttcctcagttaaaccatgttcatcaa |
217 |
Q |
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| T |
44828592 |
tcttgtaaattactctacattacctgaatttctgaactggtacctccgatgacatccttaacaatactcaacacttcctcagttaaaccatgttcatcaa |
44828691 |
T |
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| Q |
218 |
ataccgtcctaatatattaaatagtcacaagataatatgtttagttaaggagaaacttaaattattttaatgaagtagataaaatgatgcacaataagta |
317 |
Q |
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| T |
44828692 |
ataccgtcctaatatattaaatagtcacaagataatatgtttagttaaggagaaacttaaattattttaatgaagtagataaaatgatgcacaataagta |
44828791 |
T |
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| Q |
318 |
gaannnnnnnggaggtccagcaaaacatgtattacatatgaattaaatttgaaatttaagaaatttacatctttaactctactgataaattaaatagaac |
417 |
Q |
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||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
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| T |
44828792 |
gaatttttttggaggtccagcaaaacatgtattacatatcaattaaatttgaaatttaag-aatttacatctttaattctactgataaattaaatagaac |
44828890 |
T |
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| Q |
418 |
ttctaaatgtaagtataataacatgtacattttgatttacctaataaatcggtcttcaccctgagaaaatttacgttcaacttccttgtcctcgtttgac |
517 |
Q |
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| T |
44828891 |
ttctaaatgtaagtataataacatgtacattttgatttacctaataaatcggtcttcaccctgagaaaatttacgttcaacttccttgtcctcgtttgac |
44828990 |
T |
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| Q |
518 |
tcttcatcactatcactgcatactaatgtttcaccttcctgatgat |
563 |
Q |
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| T |
44828991 |
tcttcatcactatcactgcatactaatgtttcaccttcctgatgat |
44829036 |
T |
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