View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15410_low_5 (Length: 545)

Name: NF15410_low_5
Description: NF15410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15410_low_5
NF15410_low_5
[»] scaffold0038 (1 HSPs)
scaffold0038 (392-538)||(113783-113929)
[»] chr6 (65 HSPs)
chr6 (392-538)||(28322462-28322608)
chr6 (392-538)||(16271878-16272024)
chr6 (281-391)||(12667491-12667603)
chr6 (281-391)||(28702841-28702953)
chr6 (281-391)||(22779096-22779205)
chr6 (281-391)||(19713680-19713791)
chr6 (306-394)||(18960978-18961065)
chr6 (310-392)||(20452642-20452724)
chr6 (310-391)||(20459443-20459524)
chr6 (281-392)||(19719835-19719947)
chr6 (281-383)||(14176931-14177035)
chr6 (284-391)||(17784028-17784136)
chr6 (281-392)||(19898949-19899061)
chr6 (310-393)||(10985059-10985142)
chr6 (281-393)||(19169104-19169216)
chr6 (335-391)||(26896467-26896523)
chr6 (281-391)||(20058793-20058903)
chr6 (281-392)||(20050930-20051041)
chr6 (281-391)||(15666221-15666330)
chr6 (281-351)||(22764847-22764916)
chr6 (18-67)||(3917292-3917341)
chr6 (281-393)||(623775-623887)
chr6 (281-392)||(615874-615985)
chr6 (18-61)||(10984767-10984810)
chr6 (18-61)||(18909420-18909463)
chr6 (18-61)||(22232296-22232339)
chr6 (281-394)||(20048697-20048808)
chr6 (309-394)||(22631691-22631776)
chr6 (18-58)||(12667224-12667264)
chr6 (281-345)||(14473759-14473822)
chr6 (283-391)||(21750612-21750720)
chr6 (281-389)||(22059713-22059820)
chr6 (281-392)||(9131660-9131771)
chr6 (18-61)||(19714019-19714062)
chr6 (18-61)||(19720175-19720218)
chr6 (281-391)||(21961607-21961715)
chr6 (18-61)||(22778808-22778851)
chr6 (281-391)||(9145484-9145594)
chr6 (21-61)||(22764562-22764602)
chr6 (352-392)||(24143592-24143632)
chr6 (26-61)||(19899287-19899322)
chr6 (18-61)||(20459154-20459197)
chr6 (352-391)||(24150082-24150121)
chr6 (352-393)||(16825638-16825679)
chr6 (18-59)||(25506217-25506258)
chr6 (348-392)||(1549202-1549246)
chr6 (352-392)||(16816883-16816923)
chr6 (18-61)||(7245205-7245248)
chr6 (352-391)||(8275504-8275543)
chr6 (352-391)||(18965559-18965598)
chr6 (18-61)||(20452338-20452381)
chr6 (281-391)||(25690774-25690884)
chr6 (281-391)||(25697567-25697677)
chr6 (353-392)||(27517309-27517348)
chr6 (18-61)||(30824216-30824258)
chr6 (281-323)||(3917522-3917564)
chr6 (281-391)||(20075456-20075566)
chr6 (353-391)||(27509373-27509411)
chr6 (347-392)||(22067326-22067371)
chr6 (284-328)||(7245433-7245477)
chr6 (348-392)||(12391056-12391100)
chr6 (347-391)||(22069333-22069377)
chr6 (281-385)||(24432055-24432158)
chr6 (367-395)||(27074131-27074159)
chr6 (347-391)||(34268771-34268815)
[»] chr2 (49 HSPs)
chr2 (392-538)||(19048285-19048431)
chr2 (392-538)||(39831898-39832044)
chr2 (281-391)||(20279288-20279397)
chr2 (281-391)||(18243-18354)
chr2 (281-392)||(18500225-18500337)
chr2 (281-391)||(36735333-36735444)
chr2 (281-391)||(11873682-11873795)
chr2 (281-391)||(12370409-12370519)
chr2 (310-391)||(38084452-38084533)
chr2 (281-392)||(5871065-5871177)
chr2 (281-391)||(5874206-5874317)
chr2 (310-369)||(29586096-29586155)
chr2 (281-391)||(22518918-22519028)
chr2 (281-391)||(15814282-15814392)
chr2 (281-392)||(21064685-21064794)
chr2 (281-392)||(21068257-21068367)
chr2 (281-392)||(45489285-45489396)
chr2 (282-388)||(27343915-27344020)
chr2 (21-61)||(24699779-24699819)
chr2 (281-389)||(44370269-44370376)
chr2 (21-59)||(24690429-24690467)
chr2 (281-391)||(45498931-45499040)
chr2 (21-61)||(19884126-19884166)
chr2 (18-61)||(11874030-11874072)
chr2 (18-61)||(38084210-38084253)
chr2 (18-67)||(18500558-18500608)
chr2 (281-323)||(24690181-24690223)
chr2 (347-391)||(25036877-25036921)
chr2 (347-391)||(25040984-25041028)
chr2 (18-61)||(17973-18015)
chr2 (18-61)||(5870795-5870837)
chr2 (18-61)||(5873937-5873979)
chr2 (18-61)||(15944232-15944274)
chr2 (18-61)||(15952747-15952789)
chr2 (18-61)||(35138941-35138983)
chr2 (18-61)||(35147277-35147319)
chr2 (352-391)||(39649666-39649705)
chr2 (18-61)||(41233519-41233561)
chr2 (352-391)||(44299959-44299998)
chr2 (353-391)||(13038973-13039011)
chr2 (281-323)||(18973083-18973125)
chr2 (281-323)||(24699532-24699574)
chr2 (352-393)||(22940183-22940224)
chr2 (20-61)||(42565626-42565666)
chr2 (20-61)||(42574250-42574290)
chr2 (352-392)||(12374553-12374593)
chr2 (352-392)||(12388380-12388420)
chr2 (352-392)||(22954079-22954119)
chr2 (25-61)||(36735659-36735694)
[»] chr1 (35 HSPs)
chr1 (392-538)||(29994837-29994983)
chr1 (281-391)||(35070035-35070146)
chr1 (281-392)||(1961637-1961747)
chr1 (281-391)||(18098375-18098486)
chr1 (310-392)||(19367474-19367556)
chr1 (281-391)||(44832510-44832621)
chr1 (281-391)||(22116305-22116416)
chr1 (281-391)||(47108373-47108483)
chr1 (281-380)||(1955829-1955927)
chr1 (281-391)||(20429353-20429464)
chr1 (281-391)||(16884518-16884628)
chr1 (281-392)||(2336013-2336123)
chr1 (281-391)||(13450035-13450144)
chr1 (281-391)||(13185783-13185892)
chr1 (281-391)||(22840103-22840214)
chr1 (18-61)||(2416392-2416435)
chr1 (18-61)||(47108707-47108750)
chr1 (281-391)||(20518281-20518390)
chr1 (309-391)||(39454381-39454463)
chr1 (18-58)||(15473554-15473594)
chr1 (281-391)||(16366045-16366153)
chr1 (281-391)||(19763294-19763404)
chr1 (281-323)||(20521316-20521358)
chr1 (352-393)||(22570920-22570961)
chr1 (352-392)||(5624228-5624268)
chr1 (18-54)||(19367805-19367841)
chr1 (352-391)||(5638367-5638406)
chr1 (18-61)||(20429694-20429736)
chr1 (352-391)||(20979997-20980036)
chr1 (352-391)||(25926805-25926844)
chr1 (18-61)||(31540303-31540345)
chr1 (18-61)||(31548872-31548914)
chr1 (18-61)||(44832240-44832282)
chr1 (281-391)||(22486211-22486321)
chr1 (347-391)||(2684984-2685028)
[»] chr3 (82 HSPs)
chr3 (392-537)||(42393262-42393406)
chr3 (392-538)||(32966892-32967038)
chr3 (392-538)||(10025502-10025647)
chr3 (281-391)||(23288077-23288187)
chr3 (281-392)||(4313549-4313661)
chr3 (281-391)||(13111741-13111852)
chr3 (281-391)||(14893102-14893211)
chr3 (281-392)||(13105593-13105705)
chr3 (284-391)||(21638518-21638626)
chr3 (281-391)||(11180760-11180871)
chr3 (285-391)||(14888001-14888106)
chr3 (281-391)||(261364-261476)
chr3 (281-390)||(12550412-12550521)
chr3 (281-392)||(14881271-14881381)
chr3 (281-392)||(30102408-30102518)
chr3 (310-391)||(48060714-48060795)
chr3 (284-392)||(74237-74345)
chr3 (323-391)||(16031256-16031324)
chr3 (284-391)||(68145-68252)
chr3 (281-392)||(8612621-8612732)
chr3 (281-391)||(8606162-8606272)
chr3 (281-391)||(13086554-13086664)
chr3 (281-391)||(3404752-3404862)
chr3 (281-391)||(14252400-14252510)
chr3 (281-391)||(18706267-18706376)
chr3 (281-391)||(30068633-30068743)
chr3 (284-391)||(49967354-49967460)
chr3 (18-67)||(68475-68524)
chr3 (18-67)||(74568-74617)
chr3 (281-389)||(37470141-37470248)
chr3 (281-394)||(13509368-13509482)
chr3 (281-391)||(3709823-3709933)
chr3 (18-61)||(35491367-35491410)
chr3 (281-392)||(37256050-37256161)
chr3 (18-61)||(37468356-37468399)
chr3 (281-391)||(20603945-20604055)
chr3 (281-391)||(37265886-37265996)
chr3 (281-345)||(4433671-4433734)
chr3 (281-345)||(4454466-4454529)
chr3 (18-61)||(14887719-14887762)
chr3 (18-61)||(16031005-16031048)
chr3 (18-61)||(26386398-26386441)
chr3 (18-61)||(48060412-48060455)
chr3 (281-391)||(2212123-2212233)
chr3 (281-391)||(15610445-15610554)
chr3 (281-391)||(43097561-43097670)
chr3 (18-58)||(14881002-14881042)
chr3 (18-58)||(14892820-14892860)
chr3 (18-61)||(9554782-9554825)
chr3 (281-392)||(15579395-15579505)
chr3 (18-67)||(21638249-21638296)
chr3 (352-393)||(5651850-5651891)
chr3 (352-392)||(8812602-8812642)
chr3 (352-392)||(15529068-15529108)
chr3 (352-392)||(46385298-46385338)
chr3 (281-392)||(3683868-3683979)
chr3 (18-61)||(8154333-8154375)
chr3 (18-61)||(8606493-8606535)
chr3 (18-61)||(8612954-8612996)
chr3 (352-391)||(8804203-8804242)
chr3 (18-61)||(11181102-11181144)
chr3 (352-391)||(11630009-11630048)
chr3 (18-61)||(13105329-13105371)
chr3 (18-61)||(13111470-13111512)
chr3 (352-391)||(15537758-15537797)
chr3 (352-391)||(21607452-21607491)
chr3 (18-61)||(23287818-23287860)
chr3 (356-391)||(33814598-33814633)
chr3 (18-61)||(41006906-41006948)
chr3 (18-61)||(41015686-41015728)
chr3 (352-391)||(46371172-46371211)
chr3 (25-54)||(12550760-12550789)
chr3 (498-539)||(21038897-21038938)
chr3 (347-391)||(3675478-3675522)
chr3 (25-61)||(4313289-4313324)
chr3 (352-392)||(6201566-6201606)
chr3 (347-391)||(13850499-13850543)
chr3 (347-391)||(14740167-14740211)
chr3 (281-345)||(16014147-16014211)
chr3 (347-391)||(16417489-16417533)
chr3 (352-392)||(21616079-21616119)
chr3 (18-46)||(44363228-44363256)
[»] scaffold0061 (1 HSPs)
scaffold0061 (392-538)||(42033-42179)
[»] scaffold0017 (1 HSPs)
scaffold0017 (392-538)||(156607-156753)
[»] chr4 (42 HSPs)
chr4 (281-391)||(20548381-20548491)
chr4 (281-391)||(50187783-50187895)
chr4 (281-391)||(19737963-19738074)
chr4 (281-391)||(25984369-25984479)
chr4 (281-392)||(3382398-3382511)
chr4 (323-391)||(20555005-20555073)
chr4 (281-391)||(3389146-3389258)
chr4 (281-392)||(39534174-39534285)
chr4 (281-391)||(47522536-47522648)
chr4 (281-391)||(22175794-22175903)
chr4 (335-391)||(39745430-39745486)
chr4 (281-392)||(16720732-16720842)
chr4 (281-391)||(14924997-14925106)
chr4 (281-391)||(15580438-15580547)
chr4 (311-391)||(4619220-4619300)
chr4 (18-61)||(8657828-8657871)
chr4 (281-391)||(16728755-16728864)
chr4 (18-61)||(3388875-3388918)
chr4 (18-61)||(38853689-38853732)
chr4 (18-61)||(39745116-39745159)
chr4 (281-391)||(4619892-4620001)
chr4 (284-388)||(3439629-3439731)
chr4 (352-393)||(13100668-13100709)
chr4 (18-61)||(3382129-3382172)
chr4 (18-61)||(8102774-8102817)
chr4 (353-392)||(15880072-15880111)
chr4 (348-391)||(55793251-55793294)
chr4 (347-391)||(10220457-10220501)
chr4 (281-392)||(3366051-3366162)
chr4 (18-61)||(8093969-8094011)
chr4 (352-391)||(12427136-12427175)
chr4 (18-61)||(19737697-19737739)
chr4 (18-61)||(20548711-20548753)
chr4 (352-391)||(41148979-41149018)
chr4 (18-61)||(50188124-50188166)
chr4 (18-61)||(55792922-55792964)
chr4 (281-391)||(3356386-3356496)
chr4 (281-392)||(20867770-20867882)
chr4 (347-392)||(22142102-22142147)
chr4 (352-392)||(20842697-20842737)
chr4 (347-391)||(22154016-22154060)
chr4 (352-392)||(22712424-22712464)
[»] scaffold0027 (3 HSPs)
scaffold0027 (281-391)||(23583-23693)
scaffold0027 (281-391)||(345-455)
scaffold0027 (18-61)||(23923-23965)
[»] chr5 (60 HSPs)
chr5 (281-392)||(20092707-20092819)
chr5 (282-391)||(36448249-36448359)
chr5 (281-391)||(40014876-40014986)
chr5 (281-392)||(36454626-36454738)
chr5 (285-391)||(20099608-20099715)
chr5 (281-391)||(23378257-23378366)
chr5 (281-389)||(26186603-26186712)
chr5 (281-392)||(20639817-20639929)
chr5 (281-392)||(25526187-25526299)
chr5 (281-392)||(25532867-25532979)
chr5 (283-391)||(15956937-15957047)
chr5 (281-392)||(37048343-37048453)
chr5 (281-387)||(25042236-25042342)
chr5 (281-392)||(11939569-11939680)
chr5 (18-61)||(25041955-25041998)
chr5 (18-61)||(30249652-30249695)
chr5 (281-345)||(22961868-22961931)
chr5 (18-61)||(23349767-23349810)
chr5 (281-392)||(25677818-25677929)
chr5 (18-61)||(40015230-40015273)
chr5 (281-391)||(11953493-11953603)
chr5 (352-393)||(26553292-26553333)
chr5 (18-54)||(15956682-15956718)
chr5 (352-392)||(21696071-21696111)
chr5 (352-391)||(21688153-21688192)
chr5 (18-61)||(37048696-37048739)
chr5 (354-392)||(29901228-29901266)
chr5 (352-392)||(12387278-12387318)
chr5 (352-392)||(15779770-15779810)
chr5 (352-392)||(17961873-17961913)
chr5 (352-392)||(31525329-31525369)
chr5 (18-61)||(1727853-1727895)
chr5 (353-392)||(7794287-7794326)
chr5 (352-391)||(12395971-12396010)
chr5 (352-391)||(15794005-15794044)
chr5 (352-391)||(17947984-17948023)
chr5 (18-61)||(20099335-20099377)
chr5 (353-392)||(23577467-23577506)
chr5 (18-61)||(24956524-24956566)
chr5 (18-61)||(24964984-24965026)
chr5 (18-61)||(25533201-25533243)
chr5 (352-391)||(31511206-31511245)
chr5 (18-61)||(36448585-36448627)
chr5 (18-61)||(36454969-36455011)
chr5 (18-61)||(43597741-43597783)
chr5 (18-61)||(43603232-43603274)
chr5 (18-61)||(43608724-43608766)
chr5 (353-391)||(7786438-7786476)
chr5 (333-391)||(18955114-18955172)
chr5 (281-331)||(22704546-22704595)
chr5 (281-331)||(38227830-38227880)
chr5 (20-61)||(28844268-28844308)
chr5 (20-61)||(28852878-28852918)
chr5 (352-392)||(5435751-5435791)
chr5 (352-392)||(5449571-5449611)
chr5 (25-61)||(25526519-25526554)
chr5 (352-392)||(36371315-36371355)
chr5 (352-392)||(36385243-36385283)
chr5 (352-392)||(36995978-36996018)
chr5 (352-392)||(37009916-37009956)
[»] scaffold0167 (1 HSPs)
scaffold0167 (281-391)||(7980-8089)
[»] chr8 (39 HSPs)
chr8 (281-391)||(14891818-14891927)
chr8 (281-392)||(20733159-20733269)
chr8 (281-391)||(22162941-22163052)
chr8 (281-391)||(15061290-15061401)
chr8 (281-391)||(25859229-25859340)
chr8 (281-391)||(32025608-32025719)
chr8 (281-393)||(20725196-20725307)
chr8 (281-393)||(20738094-20738205)
chr8 (318-392)||(22156970-22157044)
chr8 (456-538)||(31970107-31970188)
chr8 (281-392)||(25852984-25853096)
chr8 (281-391)||(31999763-31999874)
chr8 (281-391)||(32006734-32006844)
chr8 (281-392)||(6030847-6030956)
chr8 (281-391)||(24487871-24487981)
chr8 (281-392)||(12307627-12307738)
chr8 (285-391)||(23816637-23816743)
chr8 (18-67)||(22162675-22162723)
chr8 (18-54)||(32000107-32000143)
chr8 (18-54)||(32007076-32007112)
chr8 (281-391)||(12843948-12844057)
chr8 (355-391)||(45469474-45469510)
chr8 (352-391)||(15707138-15707177)
chr8 (352-391)||(18433030-18433069)
chr8 (18-61)||(22156672-22156714)
chr8 (352-391)||(23267953-23267992)
chr8 (18-61)||(25858957-25858999)
chr8 (18-61)||(30938631-30938673)
chr8 (283-382)||(31973606-31973705)
chr8 (18-61)||(32025338-32025381)
chr8 (18-61)||(39837258-39837300)
chr8 (281-331)||(13385743-13385793)
chr8 (347-392)||(16736728-16736773)
chr8 (20-61)||(39845302-39845342)
chr8 (18-46)||(13385965-13385993)
chr8 (347-391)||(25642949-25642993)
chr8 (18-58)||(25852711-25852750)
chr8 (283-323)||(31968966-31969006)
chr8 (352-392)||(39631550-39631590)
[»] chr7 (45 HSPs)
chr7 (281-391)||(22346867-22346977)
chr7 (310-392)||(34132806-34132888)
chr7 (287-389)||(43906101-43906202)
chr7 (281-391)||(1858521-1858632)
chr7 (281-391)||(34139088-34139199)
chr7 (281-393)||(13270841-13270954)
chr7 (281-391)||(28415150-28415261)
chr7 (310-391)||(18779049-18779130)
chr7 (281-396)||(6851966-6852083)
chr7 (281-392)||(15683151-15683260)
chr7 (281-391)||(15820471-15820581)
chr7 (18-61)||(7528581-7528624)
chr7 (281-392)||(8817878-8817989)
chr7 (281-392)||(23878650-23878761)
chr7 (18-61)||(43005373-43005416)
chr7 (281-391)||(8810065-8810175)
chr7 (18-61)||(1858258-1858301)
chr7 (24-61)||(20542592-20542629)
chr7 (281-337)||(4893638-4893694)
chr7 (352-392)||(42631285-42631325)
chr7 (18-66)||(46299609-46299656)
chr7 (18-61)||(18156841-18156884)
chr7 (322-392)||(34363137-34363207)
chr7 (352-393)||(4847168-4847209)
chr7 (352-392)||(9474234-9474274)
chr7 (348-392)||(15767129-15767173)
chr7 (352-391)||(6113642-6113681)
chr7 (352-391)||(9460445-9460484)
chr7 (366-401)||(17462893-17462928)
chr7 (366-401)||(17590286-17590321)
chr7 (18-61)||(34132509-34132551)
chr7 (18-61)||(34138821-34138863)
chr7 (18-61)||(44413001-44413044)
chr7 (281-391)||(809807-809917)
chr7 (281-323)||(8913413-8913455)
chr7 (353-391)||(36898425-36898463)
chr7 (281-323)||(46462019-46462061)
chr7 (347-392)||(3424692-3424737)
chr7 (347-392)||(4891369-4891414)
chr7 (347-391)||(3433023-3433067)
chr7 (352-392)||(16388561-16388601)
chr7 (360-392)||(17016388-17016420)
chr7 (352-392)||(30365040-30365080)
chr7 (347-391)||(37285967-37286011)
chr7 (20-52)||(46461807-46461839)
[»] scaffold0001 (1 HSPs)
scaffold0001 (310-391)||(96782-96863)
[»] scaffold0028 (2 HSPs)
scaffold0028 (281-391)||(65838-65949)
scaffold0028 (18-61)||(66143-66185)
[»] scaffold1922 (1 HSPs)
scaffold1922 (282-391)||(171-281)
[»] scaffold0473 (1 HSPs)
scaffold0473 (281-391)||(9119-9228)
[»] scaffold0016 (1 HSPs)
scaffold0016 (281-391)||(14099-14208)
[»] scaffold0290 (1 HSPs)
scaffold0290 (310-391)||(22046-22127)
[»] scaffold0039 (2 HSPs)
scaffold0039 (281-389)||(89828-89937)
scaffold0039 (18-61)||(89557-89599)
[»] scaffold0320 (1 HSPs)
scaffold0320 (285-391)||(6279-6386)
[»] scaffold0085 (2 HSPs)
scaffold0085 (312-391)||(7785-7864)
scaffold0085 (20-61)||(7480-7520)
[»] scaffold0351 (2 HSPs)
scaffold0351 (281-391)||(7597-7706)
scaffold0351 (18-61)||(7301-7344)
[»] scaffold0150 (2 HSPs)
scaffold0150 (310-391)||(38583-38664)
scaffold0150 (18-61)||(38283-38325)
[»] scaffold0050 (3 HSPs)
scaffold0050 (310-391)||(27700-27781)
scaffold0050 (281-391)||(41220-41330)
scaffold0050 (18-61)||(27400-27442)
[»] scaffold0306 (2 HSPs)
scaffold0306 (281-391)||(15644-15755)
scaffold0306 (18-61)||(15983-16025)
[»] scaffold0328 (1 HSPs)
scaffold0328 (281-391)||(130-242)
[»] scaffold0253 (2 HSPs)
scaffold0253 (310-391)||(10339-10420)
scaffold0253 (310-391)||(19764-19845)
[»] scaffold0046 (1 HSPs)
scaffold0046 (281-391)||(86650-86762)
[»] scaffold0505 (1 HSPs)
scaffold0505 (281-391)||(11470-11580)
[»] scaffold0630 (1 HSPs)
scaffold0630 (318-382)||(1370-1434)
[»] scaffold0032 (1 HSPs)
scaffold0032 (281-393)||(29068-29180)
[»] scaffold0378 (3 HSPs)
scaffold0378 (281-392)||(769-880)
scaffold0378 (281-391)||(3336-3446)
scaffold0378 (281-391)||(15816-15926)
[»] scaffold0101 (1 HSPs)
scaffold0101 (281-391)||(16493-16603)
[»] scaffold0029 (3 HSPs)
scaffold0029 (281-395)||(38029-38142)
scaffold0029 (352-392)||(33952-33992)
scaffold0029 (352-391)||(20212-20251)
[»] scaffold0498 (1 HSPs)
scaffold0498 (281-391)||(10393-10503)
[»] scaffold0094 (2 HSPs)
scaffold0094 (281-392)||(30656-30766)
scaffold0094 (281-392)||(41621-41731)
[»] scaffold0441 (1 HSPs)
scaffold0441 (281-391)||(2471-2579)
[»] scaffold0119 (1 HSPs)
scaffold0119 (18-61)||(39902-39945)
[»] scaffold0014 (1 HSPs)
scaffold0014 (281-392)||(3765-3875)
[»] scaffold0435 (1 HSPs)
scaffold0435 (282-392)||(8329-8439)
[»] scaffold1699 (1 HSPs)
scaffold1699 (21-61)||(1081-1121)
[»] scaffold0582 (1 HSPs)
scaffold0582 (281-392)||(325-436)
[»] scaffold0105 (1 HSPs)
scaffold0105 (281-391)||(11026-11134)
[»] scaffold0031 (1 HSPs)
scaffold0031 (17-67)||(33430-33481)
[»] scaffold1888 (1 HSPs)
scaffold1888 (281-391)||(1005-1115)
[»] scaffold0458 (1 HSPs)
scaffold0458 (309-391)||(9255-9337)
[»] scaffold0755 (1 HSPs)
scaffold0755 (352-392)||(962-1002)
[»] scaffold0068 (2 HSPs)
scaffold0068 (352-392)||(17799-17839)
scaffold0068 (352-391)||(25718-25757)
[»] scaffold0301 (1 HSPs)
scaffold0301 (18-61)||(9240-9282)
[»] scaffold0023 (1 HSPs)
scaffold0023 (336-391)||(150634-150689)
[»] scaffold0020 (1 HSPs)
scaffold0020 (306-384)||(106448-106526)
[»] scaffold1719 (1 HSPs)
scaffold1719 (352-393)||(17-58)
[»] scaffold0503 (2 HSPs)
scaffold0503 (281-392)||(1871-1983)
scaffold0503 (281-392)||(6438-6550)
[»] scaffold0362 (1 HSPs)
scaffold0362 (306-391)||(4774-4859)
[»] scaffold0920 (1 HSPs)
scaffold0920 (282-314)||(591-623)
[»] scaffold0605 (1 HSPs)
scaffold0605 (348-392)||(9360-9404)
[»] scaffold0043 (1 HSPs)
scaffold0043 (18-58)||(32915-32955)
[»] scaffold1312 (1 HSPs)
scaffold1312 (311-342)||(1625-1656)
[»] scaffold0431 (1 HSPs)
scaffold0431 (352-391)||(2800-2839)
[»] scaffold0182 (1 HSPs)
scaffold0182 (352-391)||(1715-1754)
[»] scaffold0064 (1 HSPs)
scaffold0064 (352-391)||(9209-9248)
[»] scaffold0540 (1 HSPs)
scaffold0540 (281-391)||(2863-2972)
[»] scaffold0104 (1 HSPs)
scaffold0104 (354-392)||(38567-38605)
[»] scaffold1575 (1 HSPs)
scaffold1575 (281-322)||(25-66)
[»] scaffold0243 (1 HSPs)
scaffold0243 (281-392)||(20791-20904)
[»] scaffold0098 (1 HSPs)
scaffold0098 (347-392)||(27002-27047)
[»] scaffold0269 (1 HSPs)
scaffold0269 (365-393)||(14677-14705)
[»] scaffold0183 (1 HSPs)
scaffold0183 (359-391)||(20679-20711)
[»] scaffold0011 (2 HSPs)
scaffold0011 (352-392)||(202701-202741)
scaffold0011 (352-392)||(208778-208818)


Alignment Details
Target: scaffold0038 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 392 - 538
Target Start/End: Complemental strand, 113929 - 113783
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||    
T  113929 gtgtcaatgagatttctaagccaattgaattctaatatgtgacatttttttcatcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 113830  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  113829 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 113783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 6e-60; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 392 - 538
Target Start/End: Complemental strand, 28322608 - 28322462
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||    
T  28322608 gtgtcaatgagatttctaagccaattgaattctaatatgtgacatttttttcatcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 28322509  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28322508 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 28322462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 392 - 538
Target Start/End: Original strand, 16271878 - 16272024
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  16271878 gtgtcaatgagatttctaagccaattgaattctaatatgtgacatttttttcatcatcatattatttaatgacggattgagattcaaaggtaatttgttg 16271977  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16271978 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 16272024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 12667491 - 12667603
Alignment:
Q  281 gaggtattttaaaatacctttttgtcg--aatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12667491 gaggtattttaaaatacctccctgccgaaaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 12667590  T
Q  379 ttggggtatgaca 391  Q
    |||||||||||||    
T  12667591 ttggggtatgaca 12667603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 28702841 - 28702953
Alignment:
Q  281 gaggtattttaaaatacctttttgtcg--aatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28702841 gaggtattttaaaatacctccctgccgaaaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 28702940  T
Q  379 ttggggtatgaca 391  Q
    |||||||||||||    
T  28702941 ttggggtatgaca 28702953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 22779096 - 22779205
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  22779096 gaggtattttaaaatacctctctgccgaatttt-cactgaaaaatcagagatcgatcagagtcaagtgacacgtgtcagtggggcattaggtcaaaaatt 22779194  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  22779195 ggggtatgaca 22779205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 19713791 - 19713680
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19713791 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaat 19713692  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  19713691 tggggtatgaca 19713680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 306 - 394
Target Start/End: Original strand, 18960978 - 18961065
Alignment:
Q  306 cgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacagtg 394  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18960978 cgaattttt-actaaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacagtg 18961065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 20452642 - 20452724
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20452642 tttttcaccgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaattggggtatgacag 20452724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 20459443 - 20459524
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20459443 tttttcactgaaaaatcagagatcaatcagagtcaagtgacatgtgtcactggggccttaggtcaaaaattggggtatgaca 20459524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 19719947 - 19719835
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  19719947 gaggtattttaaaatacctccctgccgaatttttttactaaaaaatcagagatcaatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaat 19719848  T
Q  380 tggggtatgacag 392  Q
    |||||||||||||    
T  19719847 tggggtatgacag 19719835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 281 - 383
Target Start/End: Complemental strand, 14177035 - 14176931
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc--actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || |||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14177035 gaggtattttaaaatacctccctgccgaattttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 14176936  T
Q  379 ttggg 383  Q
    |||||    
T  14176935 ttggg 14176931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 17784028 - 17784136
Alignment:
Q  284 gtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgg 382  Q
    ||||||||||||||||   || |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17784028 gtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggagccttaggtcaaaaattgg 17784127  T
Q  383 ggtatgaca 391  Q
     ||||||||    
T  17784128 tgtatgaca 17784136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 19899061 - 19898949
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  19899061 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcaatcagagtcgagtgacatgtgccagtggggccttaggtcaaaaat 19898962  T
Q  380 tggggtatgacag 392  Q
    | |||||||||||    
T  19898961 ttgggtatgacag 19898949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 310 - 393
Target Start/End: Original strand, 10985059 - 10985142
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  10985059 tttttcactaaaaaatcagagatggatcagagtcaagtgacatgtgttagtggggtcttaggtcaaaaattggggtattacagt 10985142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 19169216 - 19169104
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||| ||||||||| | || ||||||||||||||||||  ||||||  ||| || || ||  ||| |||||||||||| ||||||||||||||||    
T  19169216 gaggtatttcaaaatacctctctgccgaatttttcactgaaaagacagagactgattagggttaaacgacgtgtgtcagtgggaccttaggtcaaaaatt 19169117  T
Q  381 ggggtatgacagt 393  Q
    |||||||||||||    
T  19169116 ggggtatgacagt 19169104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 26896523 - 26896467
Alignment:
Q  335 atcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26896523 atcagagttaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 26896467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 20058793 - 20058903
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || ||||| ||||| ||||||||||  ||| |||||| || ||  |||| | ||||||||| ||||||||||||||||    
T  20058793 gaggtattttaaaatacctctctgccgaatctttcattgaaaaatcaaggattgatcagggttaaacgacacgggtcagtgggaccttaggtcaaaaatt 20058892  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  20058893 ggggtatgaca 20058903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 20050930 - 20051041
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || ||||| ||||| ||||||||||  ||| |||||| || ||  |||| | |||||||||  |||||||||||||||    
T  20050930 gaggtattttaaaatacctctctgccgaatctttcattgaaaaatcaaggattgatcagggttaaacgacacgggtcagtgggaacttaggtcaaaaatt 20051029  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  20051030 ggggtatgacag 20051041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 15666221 - 15666330
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||| |||||||  ||| ||||||||| ||| |||  |||||||| |||||| || ||| |||| |||| |||||| ||||||||||||||||    
T  15666221 gaggtattttacaatacctcattgccgaattttt-actaaaacgtcagagattgatcagggttaagcgacacgtgttagtgggcccttaggtcaaaaatt 15666319  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  15666320 ggggtatgaca 15666330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 22764847 - 22764916
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgaca 351  Q
    ||||||||||||||||||| | || |||||||| || ||||||||||||||||||||||||||||||||||    
T  22764847 gaggtattttaaaatacctctctgccgaatttt-cattgaaaaatcagagatcgatcagagtcaagtgaca 22764916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 3917292 - 3917341
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttttttggacac 67  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3917292 accttggacattttatttttggacctattgacacttttttttttggacac 3917341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 623775 - 623887
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  623775 gaggtattttaaaatacctccctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 623874  T
Q  381 ggggtatgacagt 393  Q
    |||||||||||||    
T  623875 ggggtatgacagt 623887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 615874 - 615985
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  615874 gaggtattttaaaatacctccctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 615973  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  615974 ggggtatgacag 615985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 10984767 - 10984810
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10984767 accttggacattttatttttggacctattgacactttgtttttt 10984810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 18909463 - 18909420
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18909463 accttggacattttatttttggacctattgacactttgtttttt 18909420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 22232296 - 22232339
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22232296 accttggacattttatttttggacctattgacactttgtttttt 22232339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 394
Target Start/End: Original strand, 20048697 - 20048808
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||  || |||||||||||||||||  |  |||| ||||||| || || || |  |||||||||||  ||| |||||||||||    
T  20048697 gaggtattttaaaataccttcctgccgaatttttcactgaaacgt--gagaccgatcagggttaaatggcgcgtgtcagtgggatcttgggtcaaaaatt 20048794  T
Q  381 ggggtatgacagtg 394  Q
    ||||||||||||||    
T  20048795 ggggtatgacagtg 20048808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 22631776 - 22631691
Alignment:
Q  309 atttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacagtg 394  Q
    |||||||| ||| || |||| ||  |||||| ||||| ||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  22631776 atttttcattgataagtcagggactgatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgacagtg 22631691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 12667224 - 12667264
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttt 58  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12667224 accttggacattttatttttggacctattgacactttgttt 12667264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 14473822 - 14473759
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaa 345  Q
    ||||||||||||||||||||| || |||||||| |||| ||||| ||||||||||||||||||||    
T  14473822 gaggtattttaaaatacctttctgccgaatttt-cactaaaaaaccagagatcgatcagagtcaa 14473759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 21750612 - 21750720
Alignment:
Q  283 ggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgg 382  Q
    |||||||  ||||||||||||| |||||||||| |||||||||||||||   |  || ||||| || ||| ||   |||||| |||||||||||||||||    
T  21750612 ggtatttctaaatacctttttgccgaatttttctctgaaaaatcagagactcaaaagggtcaactggcatatgaatgtggggtcttaggtcaaaaattgg 21750711  T
Q  383 ggtatgaca 391  Q
    |||||||||    
T  21750712 ggtatgaca 21750720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 22059820 - 22059713
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| ||| |||  |||||||| |||||| || ||| ||||  |||||||| | ||||||||||||||||    
T  22059820 gaggtattttaaaatacctccctgccgaattttt-actaaaacgtcagagattgatcagggttaagcgacacatgtcagtgcgaccttaggtcaaaaatt 22059722  T
Q  381 ggggtatga 389  Q
    |||||||||    
T  22059721 ggggtatga 22059713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 9131660 - 9131771
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||| ||||  ||| |||||||| ||    
T  9131660 gaggtattttaaaatacctccctgccgaatttttcactgaaacgtttaagtccgatcagggtcaagtgacacgtgtcaatgggatcttgggtcaaaattt 9131759  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  9131760 ggggtatgacag 9131771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 19714062 - 19714019
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  19714062 accttgggcattttatttttggacctattgacactttgtttttt 19714019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 19720218 - 19720175
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  19720218 accttgggcattttatttttggacctattgacactttgtttttt 19720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 21961715 - 21961607
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   ||||| |||||  | |||||| |||| ||  |||||| ||||| ||||||| || |||||  ||||||||||||||||    
T  21961715 gaggtattttaaaatacctcactgtcggatttt--attgaaaagtcagggactgatcagtgtcaaatgacatgcgttagtggaaccttaggtcaaaaatt 21961618  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  21961617 ggggtatgaca 21961607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 22778808 - 22778851
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  22778808 accttggacattttattcttggacctattgacactttgtttttt 22778851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 9145484 - 9145594
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||| ||||  ||| |||||||| ||    
T  9145484 gaggtattttaaaatacctccctgccgaatttttcactgaaacgtttaagtccgatcagggtcaagtgacacgtgtcaatgggatcttgggtcaaaattt 9145583  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  9145584 ggggtatgaca 9145594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 22764562 - 22764602
Alignment:
Q  21 ttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  22764562 ttggacattttattcttggacctattgacactttgtttttt 22764602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 24143592 - 24143632
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  24143592 tgtgtcagtgggaccttaggtcaaaaattggggtatgacag 24143632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 19899322 - 19899287
Alignment:
Q  26 cattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  19899322 cattttatttttggacctattgacactttgtttttt 19899287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 20459154 - 20459197
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  20459154 accttgtacattttatttttggacctattgacacttcgtttttt 20459197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 24150082 - 24150121
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  24150082 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 24150121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 16825638 - 16825679
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  16825638 tgtgtcagtgggaccttaggtcaaaatttggggtatgacagt 16825679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 25506217 - 25506258
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttt 59  Q
    ||||| ||||||||||||||||||||||||||||||| ||||    
T  25506217 acctttgacattttatttttggacctattgacactttatttt 25506258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 1549246 - 1549202
Alignment:
Q  348 gacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||    
T  1549246 gacacgtgttagtgggaccttaggtcaaaaattggggtatgacag 1549202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 16816883 - 16816923
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  16816883 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 16816923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 7245205 - 7245248
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||    
T  7245205 accttggacattttatttttagacttatcgacactttgtttttt 7245248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 8275543 - 8275504
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  8275543 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 8275504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 18965559 - 18965598
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  18965559 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 18965598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 20452338 - 20452381
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| || ||||||||||||||||||||||||||| ||||||    
T  20452338 accttgtactttttatttttggacctattgacactttttttttt 20452381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 25690884 - 25690774
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatca-gagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||| ||   || |||||||| |||||||||| || |||||||||| |||||||  |||   |||| ||||| ||||||||||||| |    
T  25690884 gaggtattttaaaataactccctgccgaatttt-cactgaaaaaacatgagatcgatcggagtcaaacgacgcatgtccgtgggaccttaggtcaaaatt 25690786  T
Q  380 tggggtatgaca 391  Q
    | ||||||||||    
T  25690785 tagggtatgaca 25690774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 25697677 - 25697567
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatca-gagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||| ||   || |||||||| |||||||||| || |||||||||| |||||||  |||   |||| ||||| ||||||||||||| |    
T  25697677 gaggtattttaaaataactccctgccgaatttt-cactgaaaaaacatgagatcgatcggagtcaaacgacgcatgtccgtgggaccttaggtcaaaatt 25697579  T
Q  380 tggggtatgaca 391  Q
    | ||||||||||    
T  25697578 tagggtatgaca 25697567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 27517348 - 27517309
Alignment:
Q  353 gtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  27517348 gtgtcagtgggaccttaggtcaaaatttggggtatgacag 27517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 30824216 - 30824258
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  30824216 accttgtacattttatttt-ggacctattgacactttgtttttt 30824258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 3917522 - 3917564
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa 323  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  3917522 gaggtattttaaaatacctttatgccgaatttttctctgaaaa 3917564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 20075456 - 20075566
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||  ||  |||  | |||| || || |||| || ||||| |||||||||  | |||||||||||||||    
T  20075456 gaggtattttaaaatacctccctgccgaattttttgctcgaaaggctgagaccggtcggagttaaatgacacgtgtcagtgctgtcttaggtcaaaaatt 20075555  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  20075556 ggggtatgaca 20075566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 27509411 - 27509373
Alignment:
Q  353 gtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  27509411 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 27509373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 22067326 - 22067371
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  22067326 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacag 22067371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 7245433 - 7245477
Alignment:
Q  284 gtattttaaaatacctttttgtcgaatttttcactgaaaaatcag 328  Q
    ||||||||||||||||   ||||||||||||||||||||| ||||    
T  7245433 gtattttaaaatacctccctgtcgaatttttcactgaaaagtcag 7245477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 12391100 - 12391056
Alignment:
Q  348 gacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||||||| |||||   |||||||||||||||||||||||||||    
T  12391100 gacatgtgttagtggtatcttaggtcaaaaattggggtatgacag 12391056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 22069333 - 22069377
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||||||  | ||| ||||||||||||||||||||||    
T  22069333 tgacatgtgtcagtgctgtcttgggtcaaaaattggggtatgaca 22069377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 24432055 - 24432158
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||    |||||||||||| |||| ||||||||||||| || ||||| ||  ||   ||||||||| || || || |||||||||    
T  24432055 gaggtattttaaaataccaacctgtcgaattttt-actggaaaatcagagatcaattagagttaaacgatgcgtgtcagtgaggtctcagatcaaaaatt 24432153  T
Q  381 ggggt 385  Q
    |||||    
T  24432154 ggggt 24432158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 395
Target Start/End: Original strand, 27074131 - 27074159
Alignment:
Q  367 ttaggtcaaaaattggggtatgacagtgt 395  Q
    |||||||||||||||||||||||||||||    
T  27074131 ttaggtcaaaaattggggtatgacagtgt 27074159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 34268815 - 34268771
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  34268815 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 34268771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 6e-60; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 392 - 538
Target Start/End: Complemental strand, 19048431 - 19048285
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||    
T  19048431 gtgtcaatgagatttctaagccaattgaattctaatatgtgacatttttttcatcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 19048332  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19048331 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 19048285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 392 - 538
Target Start/End: Original strand, 39831898 - 39832044
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||| ||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||    
T  39831898 gtgtcaatgaaatttctaagccaattgaattctaatatgtgacatttttttcatcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 39831997  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39831998 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 39832044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 20279288 - 20279397
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20279288 gaggtattttaaaatacctctctgccgaaattt-cactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 20279386  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  20279387 ggggtatgaca 20279397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 18243 - 18354
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18243 gaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtctcagtggggccttaggtcaaaaat 18342  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  18343 tggggtatgaca 18354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 18500337 - 18500225
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18500337 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttagatcaaaaat 18500238  T
Q  380 tggggtatgacag 392  Q
    |||||||||||||    
T  18500237 tggggtatgacag 18500225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 36735444 - 36735333
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  36735444 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatggatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaat 36735345  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  36735344 tggggtatgaca 36735333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 11873795 - 11873682
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc--actgaaaaa-tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaa 377  Q
    |||||||||||||||||||   ||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11873795 gaggtattttaaaatacctccctgtcgaattttttttactgaaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggtcttaggtcaaaa 11873696  T
Q  378 attggggtatgaca 391  Q
    ||||||||||||||    
T  11873695 attggggtatgaca 11873682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 12370409 - 12370519
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||||||  ||| |||||||||||    
T  12370409 gaggtattttaaaatacctttttgccgaattttttactgaaaaatcagggattgatcagagtcaaatgacacgtgtcagtgggatcttgggtcaaaaatt 12370508  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  12370509 ggggtatgaca 12370519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 38084452 - 38084533
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38084452 ttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 38084533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 5871065 - 5871177
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaa-tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   ||  ||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  5871065 gaggtattttaaaatacctccctgctgaatttttttactgaaaaatcagagatcgatcagagtcgagtgatatgtgtcagtgggcccttaggtcaaaaat 5871164  T
Q  380 tggggtatgacag 392  Q
    |||||||||||||    
T  5871165 tggggtatgacag 5871177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 5874206 - 5874317
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaa-tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   ||  ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  5874206 gaggtattttaaaatacctccctgctgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggacccttaggtcaaaaat 5874305  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  5874306 tggggtatgaca 5874317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 29586155 - 29586096
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggcctta 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29586155 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggcctta 29586096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 22518918 - 22519028
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | | |||| ||||||||| |||||||| |||| |||||| || ||  |||| ||||||||||| ||||||||||||||||    
T  22518918 gaggtattttaaaatacctctctatcgagtttttcacttaaaaatcatagattgatcagggttaaacgacacgtgtcagtgggaccttaggtcaaaaatt 22519017  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  22519018 ggggtatgaca 22519028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 15814282 - 15814392
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||  |||  |||| ||||    ||||| |||||||||    
T  15814282 gaggtattttaaaatacctctttaactaattttttactgaaaaatcagagatcgatcagagtcaaacgacgcgtgttagtgatatcttagttcaaaaatt 15814381  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  15814382 ggggtatgaca 15814392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 21064794 - 21064685
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||| ||||||||   |||||||||||  | |||||| |||| ||  |||||| ||||| ||||||| ||||||||| |||||||| |||||||    
T  21064794 gaggtatttttaaatacctcactgtcgaatttt--attgaaaagtcagggactgatcagggtcaaatgacatgcgtcagtgggaccttaggtaaaaaatt 21064697  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  21064696 ggggtatgacag 21064685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 21068367 - 21068257
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||| ||| |||||| |||||  | | | ||   || || ||||||||||||||||    
T  21068367 gaggtattttaaaatacctttctgctgaatttttcactgaaaaatcagggattgatcagggtcaaaaggcgtatgaatgt-ggaccttaggtcaaaaatt 21068269  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  21068268 ggggtatgacag 21068257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 45489285 - 45489396
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||| ||||||||| | || |||| ||||||||||||| |  |||| ||| ||| || || |||| |||||| ||| | ||||||||||||||||    
T  45489285 gaggtatttcaaaatacctctctgccgaaattttcactgaaaagttggagaccgaacagggttaaatgacgtgtgtcggtgtgaccttaggtcaaaaatt 45489384  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  45489385 ggggtatgacag 45489396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 388
Target Start/End: Original strand, 27343915 - 27344020
Alignment:
Q  282 aggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattg 381  Q
    ||||||||||||||||||  | | ||||||||||||||||||||| ||||| |||||| || ||  |||| |||||||| || |||||||| |||||||     
T  27343915 aggtattttaaaatacctcct-gccgaatttttcactgaaaaatccgagattgatcagggttaaacgacacgtgtcagtaggaccttaggtaaaaaattt 27344013  T
Q  382 gggtatg 388  Q
    |||||||    
T  27344014 gggtatg 27344020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 24699819 - 24699779
Alignment:
Q  21 ttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24699819 ttggacattttatttttggacctattgacactttgtttttt 24699779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 44370376 - 44370269
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| ||| |||  |||||||| |||||| || ||| ||||  |||||||| | ||||||||||||||||    
T  44370376 gaggtattttaaaatacctccctgccgaattttt-actaaaacgtcagagattgatcagggttaagcgacacatgtcagtgcgaccttaggtcaaaaatt 44370278  T
Q  381 ggggtatga 389  Q
    |||||||||    
T  44370277 ggggtatga 44370269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 24690467 - 24690429
Alignment:
Q  21 ttggacattttatttttggacctattgacactttgtttt 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24690467 ttggacattttatttttggacctattgacactttgtttt 24690429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 45498931 - 45499040
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||| |||  || |||||||| ||||||||  | |||||  |||||| || ||  ||| ||||||||||||| |||||||||||||||    
T  45498931 gaggtattttaaaatatcttcctgccgaatttt-cactgaaacgttagagactgatcagggttaaacgacgtgtgtcagtggggtcttaggtcaaaaatt 45499029  T
Q  381 ggggtatgaca 391  Q
    || ||||||||    
T  45499030 ggagtatgaca 45499040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 19884126 - 19884166
Alignment:
Q  21 ttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  19884126 ttggacattttatttttggacctattgacactttttttttt 19884166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 11874072 - 11874030
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  11874072 accttggacattttatttttggaccta-tgacactttgtttttt 11874030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 38084210 - 38084253
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  38084210 accttgggcattttatttttggacctattaacactttgtttttt 38084253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 18500608 - 18500558
Alignment:
Q  18 accttggacattttatttttggacctattgacacttt-gttttttggacac 67  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  18500608 accttgggcattttatttttggacctattgacactttaattttttggacac 18500558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 323
Target Start/End: Complemental strand, 24690223 - 24690181
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa 323  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  24690223 gaggtattttaaaatacctttttgccgaatttttctctgaaaa 24690181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 25036877 - 25036921
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||    
T  25036877 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 25036921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 25040984 - 25041028
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||    
T  25040984 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 25041028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 17973 - 18015
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  17973 accttgtacattttatttt-ggacctattgacactttgtttttt 18015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 5870795 - 5870837
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  5870795 accttgtacattttatttt-ggacctattgacactttgtttttt 5870837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 5873937 - 5873979
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  5873937 accttgtacattttatttt-ggacctattgacactttgtttttt 5873979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 15944232 - 15944274
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  15944232 accttgtacattttatttt-ggacctattgacactttgtttttt 15944274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 15952747 - 15952789
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  15952747 accttgtacattttatttt-ggacctattgacactttgtttttt 15952789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 35138983 - 35138941
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  35138983 accttgtacattttatttt-ggacctattgacactttgtttttt 35138941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 35147319 - 35147277
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  35147319 accttgtacattttatttt-ggacctattgacactttgtttttt 35147277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 39649705 - 39649666
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  39649705 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 39649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 41233519 - 41233561
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  41233519 accttgtacattttatttt-ggacctattgacactttgtttttt 41233561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 44299998 - 44299959
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  44299998 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 44299959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 13038973 - 13039011
Alignment:
Q  353 gtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  13038973 gtgtcaatggggtcttaggtcaaaaattggggtatgaca 13039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 18973083 - 18973125
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa 323  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  18973083 gaggtattttaaaatacctttctgccgaatttttctctgaaaa 18973125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 323
Target Start/End: Complemental strand, 24699574 - 24699532
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa 323  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  24699574 gaggtattttaaaatacctttctgccgaatttttctctgaaaa 24699532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 393
Target Start/End: Complemental strand, 22940224 - 22940183
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||| |||| |||||||| |||||||||||||||    
T  22940224 tgtgtcagtgggacctttggtcaaaatttggggtatgacagt 22940183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 42565626 - 42565666
Alignment:
Q  20 cttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  42565626 cttgtacattttatttt-ggacctattgacactttgtttttt 42565666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 42574250 - 42574290
Alignment:
Q  20 cttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  42574250 cttgtacattttatttt-ggacctattgacactttgtttttt 42574290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 12374593 - 12374553
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||  ||||||||||||| ||||||||||||||    
T  12374593 tgtgtcagtggaaccttaggtcaaaatttggggtatgacag 12374553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 12388420 - 12388380
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||  ||||||||||||| ||||||||||||||    
T  12388420 tgtgtcagtggaaccttaggtcaaaatttggggtatgacag 12388380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 22954119 - 22954079
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| |||| |||||||| ||||||||||||||    
T  22954119 tgtgtcagtgggacctttggtcaaaatttggggtatgacag 22954079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 36735694 - 36735659
Alignment:
Q  25 acattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36735694 acattttatttt-ggacctattgacactttgtttttt 36735659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 6e-60; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 392 - 538
Target Start/End: Original strand, 29994837 - 29994983
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||    
T  29994837 gtgtcaatgagatttctaagccaattgaattctaatatgtgacatttttttcatcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 29994936  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  29994937 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 29994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 35070146 - 35070035
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaattttt-cactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35070146 gaggtattttaaaatacctctttgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 35070047  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  35070046 tggggtatgaca 35070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 1961747 - 1961637
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  1961747 gaggtattttaaaatacctctttgccaaatttt-cactgaaaaatcagagatcgatcagagtcaagtgttatgtgtcagtggggccttaggtcaaaaatt 1961649  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  1961648 ggggtatgacag 1961637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 18098486 - 18098375
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  18098486 gaggtattttaaaatacctccatgtcgaatttttccactgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggttaaaaat 18098387  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  18098386 tggggtatgaca 18098375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 19367556 - 19367474
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19367556 ttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 19367474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 44832510 - 44832621
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  44832510 gaggtattttaaaatacctccttgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgaagccttaggttaaaaat 44832609  T
Q  380 tggggtatgaca 391  Q
    |||| |||||||    
T  44832610 tgggatatgaca 44832621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 22116305 - 22116416
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    ||||||||| |||||||||   || |||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  22116305 gaggtatttaaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagttgagtgacatgtgtcagtggggccttaggtcaaaaat 22116404  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  22116405 tggggtatgaca 22116416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 47108483 - 47108373
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||  ||  |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||    
T  47108483 gaggtattttaaaataccttcctgcggaattttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtaagtgggaccttaggttaaaaatt 47108384  T
Q  381 ggggtatgaca 391  Q
     || |||||||    
T  47108383 aggatatgaca 47108373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 281 - 380
Target Start/End: Complemental strand, 1955927 - 1955829
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| |||  | |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  1955927 gaggtattttaaaatacctctttaccaaatttt-cactgaaaaatcagagatcgatcagagtcaagtgatacgtgtcagtggggccttaggtcaaaaatt 1955829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 20429464 - 20429353
Alignment:
Q  281 gaggtattttaaaatacctttttgtcga-atttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||  ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  20429464 gaggtattttaaaatacctccctgccgattttttttactgaataatcagagatcgatcagagtcaagtgacaagtgtcagtgggaccttaggtcaaaaat 20429365  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  20429364 tggggtatgaca 20429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 16884628 - 16884518
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||  ||| |||||| || |   |||| ||||||||||||||||||||||||||||    
T  16884628 gaggtattttaaaatacttttttgccgaatttttcactgaaaaatcatggattgatcagggttagacgacacgtgtcagtggggccttaggtcaaaaatt 16884529  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  16884528 ggggtatgaca 16884518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 2336013 - 2336123
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | |||||||||||||  ||| |  | | || |||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  2336013 gaggtattttaaaatacctctctgtcgaatttttct-tgagatgttaaagttcgaccacggtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 2336111  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  2336112 ggggtatgacag 2336123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 13450144 - 13450035
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||| |||| |||||||||||||||||| ||||||| ||||  | ||||||||| ||||||||||||| ||    
T  13450144 gaggtattttaaaatacctccctgccgaatttt-cactaaaaaatcagagatcgatccgagtcaaatgacgcgcgtcagtgggaccttaggtcaaaattt 13450046  T
Q  381 ggggtatgaca 391  Q
     ||||||||||    
T  13450045 agggtatgaca 13450035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 13185892 - 13185783
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||| || | || |||||||| || ||||||||||||||| |||||| || ||  |||||||||| ||||  ||||||||||||||||    
T  13185892 gaggtattttaaaatatctctctgccgaatttt-cattgaaaaatcagagattgatcagggttaaacgacatgtgtcggtggaaccttaggtcaaaaatt 13185794  T
Q  381 ggggtatgaca 391  Q
    || ||||||||    
T  13185793 ggagtatgaca 13185783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 22840103 - 22840214
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagaga-tc-gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||| ||| ||||||||| |||||||  ||||||| || |||||| || ||  |||  ||||||||||| ||||||||||||||    
T  22840103 gaggtattttaaaataccttcttgccgaattttt-actgaaacgtcagagactctgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaa 22840201  T
Q  379 ttggggtatgaca 391  Q
    |||||||||||||    
T  22840202 ttggggtatgaca 22840214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 2416392 - 2416435
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2416392 accttggacattttatttttggacctattgacactttgtttttt 2416435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 47108750 - 47108707
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  47108750 accttgtacattttatttttggacctattgacactttgtttttt 47108707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 20518390 - 20518281
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||| || |||| ||| ||||||  |||||| |||| ||  |||||  ||||| ||||||| || ||||||  |||||||||||||||    
T  20518390 gaggtattttaaaatatctatttgccga-tttttccttgaaaagtcagggactgatcatggtcaaatgacatgcgttagtgggatcttaggtcaaaaatt 20518292  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  20518291 ggggtatgaca 20518281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 39454463 - 39454381
Alignment:
Q  309 atttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||| |||||| | || ||  |||||| ||||| ||||||| ||||||| | |||||||||||||||||||||||||||    
T  39454463 atttttcattgaaaagttagggactgatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgaca 39454381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 15473554 - 15473594
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttt 58  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  15473554 accttggacattttatttttggacctattgacattttgttt 15473594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 16366153 - 16366045
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||||||| |||| |||||| |||||| || ||||  |||||  || ||  |||| |||||||| || ||||| ||||||||||    
T  16366153 gaggtattttaaaatacctttttgccgaaattttcaatgaaaagtctgagactgatcaaggttaaacgacacgtgtcagt-ggtcctta-gtcaaaaatt 16366056  T
Q  381 ggggtatgaca 391  Q
     ||||||||||    
T  16366055 agggtatgaca 16366045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 19763294 - 19763404
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || |||||||||||||||||| |||| ||  ||| ||  ||||  |||   ||||||||| | ||| |||||||||||    
T  19763294 gaggtattttaaaatacctatctgccgaatttttcactgaaaagtcagggactgattaggatcaaaggacgcatgtcagtggtgtcttgggtcaaaaatt 19763393  T
Q  381 ggggtatgaca 391  Q
     ||||||||||    
T  19763394 agggtatgaca 19763404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 20521316 - 20521358
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa 323  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  20521316 gaggtattttaaaatacctttatgccgaatttttcactgaaaa 20521358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 22570920 - 22570961
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  22570920 tgtgtcagtgggaccttaggtcaaaatttggggtatgacagt 22570961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 5624228 - 5624268
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  5624228 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 5624268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 19367841 - 19367805
Alignment:
Q  18 accttggacattttatttttggacctattgacacttt 54  Q
    |||||||||||||||||||||||| ||||||||||||    
T  19367841 accttggacattttatttttggacttattgacacttt 19367805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 5638367 - 5638406
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  5638367 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 5638406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 20429736 - 20429694
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  20429736 accttgtacattttatttt-ggacctattgacactttgtttttt 20429694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 20979997 - 20980036
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  20979997 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 20980036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 25926805 - 25926844
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  25926805 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 25926844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 31540345 - 31540303
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  31540345 accttgtacattttatttt-ggacctattgacactttgtttttt 31540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 31548914 - 31548872
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  31548914 accttgtacattttatttt-ggacctattgacactttgtttttt 31548872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 44832240 - 44832282
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  44832240 accttgtacattttatttt-ggacctattgacactttgtttttt 44832282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 22486211 - 22486321
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||  ||  |||  | |||| || || |||| || ||||| |||||||||  | |||||||||||||||    
T  22486211 gaggtattttaaaatacctccctgccgaattttttgctcgaaaggctgagaccggtcggagttaaatgacacgtgtcagtgctgtcttaggtcaaaaatt 22486310  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  22486311 ggggtatgaca 22486321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 2685028 - 2684984
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  2685028 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 2684984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 5e-54; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 392 - 537
Target Start/End: Original strand, 42393262 - 42393406
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||||||||||||||| |||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||| |||||||||||    
T  42393262 gtgtcaatgagatttctaagccaattgaattctaatatgtgacatttttt-catcatcatattatttaatgacggtttgggattcaaaagtaatttgttg 42393360  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatct 537  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42393361 gtttcccccctatatatagttgatgaaacttgcatcattttcatct 42393406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 392 - 538
Target Start/End: Original strand, 32966892 - 32967038
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||||||||||||||| |||||||||||| ||||||||       | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  32966892 gtgtcaatgagatttctaagccaattgaattctaacatgtgacatttttttcatcatcatattatttaatgacggtttgggattcaaagataatttgttg 32966991  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  32966992 gtttcccccctatatatagttgatgaatcttgcatcattttcatctc 32967038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 392 - 538
Target Start/End: Complemental strand, 10025647 - 10025502
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    |||||||||||||||||||||  |||||||||||| |||||| |       | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  10025647 gtgtcaatgagatttctaagctaattgaattctaacatgtgatatttttt-catcatcatattatttaatgacggattgggattcaaaggtaatttgttg 10025549  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10025548 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 10025502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 23288077 - 23288187
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23288077 gaggtattttaaaatacctccctgccgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtaagtggggccttaggtcaaaaatt 23288176  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  23288177 ggggtatgaca 23288187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 4313549 - 4313661
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4313549 gaggtattttaaaatacctccctgtcgaattttttcactgaaaaattagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 4313648  T
Q  380 tggggtatgacag 392  Q
    |||||||||||||    
T  4313649 tggggtatgacag 4313661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 13111741 - 13111852
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13111741 gaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 13111840  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  13111841 tggggtatgaca 13111852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 14893102 - 14893211
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14893102 gaggtattttaaaatacctccatgccgaattttt-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 14893200  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  14893201 ggggtatgaca 14893211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 13105593 - 13105705
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13105593 gaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 13105692  T
Q  380 tggggtatgacag 392  Q
    | |||||||||||    
T  13105693 tagggtatgacag 13105705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 21638518 - 21638626
Alignment:
Q  284 gtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgg 382  Q
    ||||||||||||| || | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21638518 gtattttaaaataactctctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgg 21638617  T
Q  383 ggtatgaca 391  Q
    |||||||||    
T  21638618 ggtatgaca 21638626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 11180871 - 11180760
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  11180871 gaggtattttaaaataccttcctgtcgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggttaaaaat 11180772  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  11180771 tggggtatgaca 11180760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 14888001 - 14888106
Alignment:
Q  285 tattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggg 384  Q
    ||||||||||||||| | ||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14888001 tattttaaaatacctctctgctgaattttt-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaattgggg 14888099  T
Q  385 tatgaca 391  Q
    |||||||    
T  14888100 tatgaca 14888106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 261476 - 261364
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaa--tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || | ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  261476 gaggtattttaaaatacctccctgccaaatttttttcactgaaaaatcaaagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 261377  T
Q  379 ttggggtatgaca 391  Q
    |||||||||||||    
T  261376 ttggggtatgaca 261364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 12550521 - 12550412
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  12550521 gaggtattttaaaatacctccctgccgaattttttactgaaaaatcagagatcgatcggagtcgagtgacatgtgtcactggggccttaggtcaaaaatt 12550422  T
Q  381 ggggtatgac 390  Q
    ||||||||||    
T  12550421 ggggtatgac 12550412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 14881271 - 14881381
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14881271 gaggtattttaaaatacctccatgccgaatattt-attgaaaaatcagagatcgatcagagtcaagtgacatgtgtcggtggggccttaggtcaaaaatt 14881369  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  14881370 ggggtatgacag 14881381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 30102408 - 30102518
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  30102408 gaggtattttaaaatacctctctgccgaattttt-actggaaaatcagagatcgatcagagtcaagtgacatgtatcagtggggccttaagtcaaaaatt 30102506  T
Q  381 ggggtatgacag 392  Q
    ||| ||||||||    
T  30102507 gggatatgacag 30102518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 48060714 - 48060795
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48060714 tttttcactgaaaaatcagtgatcgatcagagtcaagtgacatgtgtcagtgaggccttaggtcaaaaattggggtatgaca 48060795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 74345 - 74237
Alignment:
Q  284 gtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggg 383  Q
    ||||||||||||||||   ||  |||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  74345 gtattttaaaatacctccctgctgaattttttactgaataatcaaagatcgatcagagtcaagtgacatgtgccagtggggcgttaggtcaaaaattggg 74246  T
Q  384 gtatgacag 392  Q
    |||||||||    
T  74245 gtatgacag 74237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 16031256 - 16031324
Alignment:
Q  323 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16031256 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 16031324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 68252 - 68145
Alignment:
Q  284 gtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggg 383  Q
    ||||||||||||||||   ||  |||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  68252 gtattttaaaatacctccctgctgaattttttactgaataatcaaagatcgatcagagtcaagtgacatgtgccagtggggcgttaggtcaaaaattggg 68153  T
Q  384 gtatgaca 391  Q
    ||||||||    
T  68152 gtatgaca 68145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 8612732 - 8612621
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || | ||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||    
T  8612732 gaggtattttaaaatacctccctgccaaatcttttactgaaaaatcagagatcgatcagagtcgagtgacatgtctcagtgggctcttaggtcaaaaatt 8612633  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  8612632 ggggtatgacag 8612621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 8606272 - 8606162
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || | ||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||  |||||||||||||||    
T  8606272 gaggtattttaaaatacctccctgccaaattttttactgaaaaatcagagatcgattagagtcgagtgacatgtttcagtgggctcttaggtcaaaaatt 8606173  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  8606172 ggggtatgaca 8606162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 13086664 - 13086554
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| |||||||| ||||||| |||||| |||| ||  |||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  13086664 gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgttagtgggaccttaggtcaaaaatt 13086565  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  13086564 ggggtatgaca 13086554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 3404862 - 3404752
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||| |||||||||   |  ||||| ||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||||    
T  3404862 gaggtatttaaaaatacctacctcccgaatattttactgaaaaatcagagatcgattagagtcgaatgacatgtgtcagtggggccttaggtaaaaaatt 3404763  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  3404762 ggggtatgaca 3404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 14252510 - 14252400
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||||| ||| || || ||   || ||||||| |||| ||||||||||||||||    
T  14252510 gaggtattttaaaatacctctctgccgaatttttcactgaaaaatcagagattgattagggttaaacaacgtgtgtcaatgggaccttaggtcaaaaatt 14252411  T
Q  381 ggggtatgaca 391  Q
     ||||||||||    
T  14252410 agggtatgaca 14252400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 18706376 - 18706267
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||| ||||||| |||||||  |||||||||||||| ||||||| ||| |||||| || ||  |||| ||||||||||| ||||||||||||||||    
T  18706376 gaggtattgtaaaatatctttttgctgaatttttcactgagaaatcagggattgatcag-gttaaacgacacgtgtcagtgggaccttaggtcaaaaatt 18706278  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  18706277 ggggtatgaca 18706267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 30068633 - 30068743
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaa-tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    ||||||||||||||||||| | || |||||||| |||||||||| ||| ||||||||||||||||||||||  |  |||||||| ||||||||||||| |    
T  30068633 gaggtattttaaaatacctctctgccgaatttt-cactgaaaaaatcaaagatcgatcagagtcaagtgacgcgcatcagtgggaccttaggtcaaaatt 30068731  T
Q  380 tggggtatgaca 391  Q
    | ||||||||||    
T  30068732 tagggtatgaca 30068743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 49967460 - 49967354
Alignment:
Q  284 gtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggg 383  Q
    |||||||||||||||| | || ||||||||||  |||||  | | || |||||||| ||||||||||| |||||||||||||||||||||||||||| ||    
T  49967460 gtattttaaaatacctctctgccgaatttttct-tgaaatgttaaagttcgatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaattagg 49967362  T
Q  384 gtatgaca 391  Q
    ||||||||    
T  49967361 gtatgaca 49967354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 68524 - 68475
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttttttggacac 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68524 accttggacattttatttttggacctattgacactttgttttttggacac 68475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 74617 - 74568
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttttttggacac 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  74617 accttggacattttatttttggacctattgacactttgttttttggacac 74568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 37470248 - 37470141
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || ||||||||||  |||||  | | ||  ||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  37470248 gaggtattttaaaatacctctctgccgaatttttct-tgaaatgttaaagtccgatcagggtcaagtgacacgtgttagtggggccttaggtcaaaaatt 37470150  T
Q  381 ggggtatga 389  Q
    |||||||||    
T  37470149 ggggtatga 37470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 394
Target Start/End: Original strand, 13509368 - 13509482
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactg--aaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    ||||||||||||||||| | | || |||| |||| ||||  ||||| |||||||||||||||||||| ||||  | ||||||||| |||||||||||||     
T  13509368 gaggtattttaaaatacttctctgccgaactttt-actggaaaaaaacagagatcgatcagagtcaaatgacgcgcgtcagtgggaccttaggtcaaaat 13509466  T
Q  379 ttggggtatgacagtg 394  Q
    || |||||||||||||    
T  13509467 ttagggtatgacagtg 13509482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 3709933 - 3709823
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaa-tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||| || | ||||||||||| |||||||||| |||||||||||||||||||||  |||  | ||||||||| | ||| ||||||| |    
T  3709933 gaggtattttaaaatatctctctgtcgaatttt-cactgaaaaagtcagagatcgatcagagtcaaacgacgcgcgtcagtgggactttatgtcaaaatt 3709835  T
Q  380 tggggtatgaca 391  Q
    | ||||||||||    
T  3709834 tagggtatgaca 3709823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 35491410 - 35491367
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35491410 accttggacattttatttttggacctattgacactttgtttttt 35491367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 37256050 - 37256161
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  37256050 gaggtattttaaaatacctccctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 37256149  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  37256150 ggggtatgacag 37256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 37468399 - 37468356
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37468399 accttggacattttatttttggacctattgacactttgtttttt 37468356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 20603945 - 20604055
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  20603945 gaggtattttaaaatacctccctgccgaatttttcactgaaacgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 20604044  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  20604045 ggggtatgaca 20604055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 37265886 - 37265996
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  37265886 gaggtattttaaaatacctccctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 37265985  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  37265986 ggggtatgaca 37265996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 4433734 - 4433671
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaa 345  Q
    ||||||||||||||||||| | || | |||||| |||||||||||||||||||||||||||||||    
T  4433734 gaggtattttaaaatacctctctgccaaatttt-cactgaaaaatcagagatcgatcagagtcaa 4433671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 4454529 - 4454466
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaa 345  Q
    ||||||||||||||||||| | || | |||||| |||||||||||||||||||||||||||||||    
T  4454529 gaggtattttaaaatacctctctgccaaatttt-cactgaaaaatcagagatcgatcagagtcaa 4454466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 14887719 - 14887762
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  14887719 accttggacattttatttttggacctattgacactttatttttt 14887762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 16031005 - 16031048
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  16031005 accttgtacattttatttttggacctattgacactttgtttttt 16031048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 26386398 - 26386441
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  26386398 accttggacattttatttttggacctattgacactttttttttt 26386441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 48060412 - 48060455
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  48060412 accttgtacattttatttttggacctattgacactttgtttttt 48060455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 2212123 - 2212233
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||| |||||||||   ||||||| ||||||||||||| |  |||| ||| ||| || || |||| |||||| | | | ||||||||||||||||    
T  2212123 gaggtatttcaaaatacctccctgtcgaaattttcactgaaaatttggagaccgaacagggttaaatgacgtgtgtcggcgtgaccttaggtcaaaaatt 2212222  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  2212223 ggggtatgaca 2212233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 15610445 - 15610554
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||| |||||||   || ||||||||| ||| |||  |||||||| ||| || || ||| |||| | ||||||||| ||||||||||||||||    
T  15610445 gaggtattttataatacctccctgccgaattttt-actaaaacgtcagagattgattagggttaagcgacacgcgtcagtgggaccttaggtcaaaaatt 15610543  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  15610544 ggggtatgaca 15610554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 43097670 - 43097561
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || | ||||||| |||||||| | |||||| |||||  || ||  |||| ||||||||||| ||||| ||||||||||    
T  43097670 gaggtattttaaaatacctccctgcctaattttt-actgaaaagttagagattgatcatggttaaacgacacgtgtcagtgggaccttaagtcaaaaatt 43097572  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  43097571 ggggtatgaca 43097561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 14881002 - 14881042
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttt 58  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  14881002 accttgtacattttatttttggacctattgacactttgttt 14881042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 14892820 - 14892860
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttt 58  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  14892820 accttgtacattttatttttggacctattgacactttgttt 14892860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 9554782 - 9554825
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  9554782 accttggacattttatttttagacctattgacactttatttttt 9554825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 15579395 - 15579505
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   |  ||||||||| ||| |||  |||||||| ||| || || ||| |||| | ||||||||| |||||||||||||| |    
T  15579395 gaggtattttaaaatacctccctaccgaattttt-actaaaacgtcagagattgattagggttaagcgacacgcgtcagtgggaccttaggtcaaaaact 15579493  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  15579494 ggggtatgacag 15579505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 21638249 - 21638296
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttttttggacac 67  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  21638249 accttggacattttatttttggacatattgacactt--ttttttggacac 21638296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 5651850 - 5651891
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  5651850 tgtgtcagtgggaccttaggtcaaaatttggggtatgacagt 5651891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 8812642 - 8812602
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  8812642 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 8812602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 15529068 - 15529108
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  15529068 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 15529108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 46385338 - 46385298
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  46385338 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 46385298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 3683979 - 3683868
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||  ||  |||  | |||| || || |||| || ||||| |||||||||  | |||||||||||||||    
T  3683979 gaggtattttaaaatacctccctgccgaattttttgctcgaaaggctgagaccggtcggagttaaatgacacgtgtcagtgctgtcttaggtcaaaaatt 3683880  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  3683879 ggggtatgacag 3683868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8154333 - 8154375
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  8154333 accttgtacattttatttt-ggacctattgacactttgtttttt 8154375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 8606535 - 8606493
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  8606535 accttgtacattttatttt-ggacctattgacactttgtttttt 8606493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 8612996 - 8612954
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  8612996 accttgtacattttatttt-ggacctattgacactttgtttttt 8612954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 8804242 - 8804203
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  8804242 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 8804203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 11181144 - 11181102
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  11181144 accttgtacattttatttt-ggacctattgacactttgtttttt 11181102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 11630009 - 11630048
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  11630009 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 11630048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 13105329 - 13105371
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  13105329 accttgtacattttatttt-ggacctattgacactttgtttttt 13105371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 13111470 - 13111512
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  13111470 accttgtacattttatttt-ggacctattgacactttgtttttt 13111512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 15537758 - 15537797
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  15537758 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 15537797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 21607491 - 21607452
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  21607491 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 21607452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 23287818 - 23287860
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  23287818 accttgtacattttatttt-ggacctattgacactttgtttttt 23287860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 33814598 - 33814633
Alignment:
Q  356 tcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||| |||||||||||||||||||||||||||    
T  33814598 tcagtgggaccttaggtcaaaaattggggtatgaca 33814633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 41006948 - 41006906
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  41006948 accttgtacattttatttt-ggacctattgacactttgtttttt 41006906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 41015728 - 41015686
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  41015728 accttgtacattttatttt-ggacctattgacactttgtttttt 41015686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 46371211 - 46371172
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  46371211 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 46371172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 54
Target Start/End: Complemental strand, 12550789 - 12550760
Alignment:
Q  25 acattttatttttggacctattgacacttt 54  Q
    ||||||||||||||||||||||||||||||    
T  12550789 acattttatttttggacctattgacacttt 12550760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 539
Target Start/End: Original strand, 21038897 - 21038938
Alignment:
Q  498 cccctatatatagttgatgaaacttgcatcattttcatctca 539  Q
    |||||||||||| | ||| |||||||||||||||||||||||    
T  21038897 cccctatatatattcgatcaaacttgcatcattttcatctca 21038938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 3675522 - 3675478
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  3675522 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 3675478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 4313289 - 4313324
Alignment:
Q  25 acattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4313289 acattttatttt-ggacctattgacactttgtttttt 4313324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 6201606 - 6201566
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||| | ||||||||||||| ||||||||||||||    
T  6201606 tgtgtcagtgtgaccttaggtcaaaatttggggtatgacag 6201566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 13850499 - 13850543
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||  | ||||||||||||||||||||||||||    
T  13850499 tgacatgtgtcaatgttgtcttaggtcaaaaattggggtatgaca 13850543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 14740167 - 14740211
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||| ||||  | ||||||||||||||||||||||||||    
T  14740167 tgacatgtgttagtgctgtcttaggtcaaaaattggggtatgaca 14740211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 16014211 - 16014147
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaa 345  Q
    ||||||||||||||||||  | || ||||||||||||||||| | || || |||||||| |||||    
T  16014211 gaggtattttaaaatacccctctgccgaatttttcactgaaacaacaaagttcgatcagggtcaa 16014147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 16417489 - 16417533
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||    
T  16417489 tgacatgtgtcggtgctgtcttaggtcaaaaattggggtatgaca 16417533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 21616119 - 21616079
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||| ||||    
T  21616119 tgtgtcagtgggaccttaggtcaaaatttggggtataacag 21616079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 44363228 - 44363256
Alignment:
Q  18 accttggacattttatttttggacctatt 46  Q
    |||||||||||||||||||||||||||||    
T  44363228 accttggacattttatttttggacctatt 44363256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 106; Significance: 9e-53; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 392 - 538
Target Start/End: Complemental strand, 42179 - 42033
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||       | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  42179 gtgtcgatgagatttctaagccaattgaattctaacatgtgacatttttttcatcatcatattatttaatgacgggttgggattcaaaggtaatttgttg 42080  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42079 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 42033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 106; Significance: 9e-53; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 392 - 538
Target Start/End: Original strand, 156607 - 156753
Alignment:
Q  392 gtgtcaatgagatttctaagccgattgaattctaatatgtgacannnnnnncctcatcatattatttaatgacggtttgggattcaaaggtaatttgttg 491  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||       | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  156607 gtgtcgatgagatttctaagccaattgaattctaacatgtgacatttttttcatcatcatattatttaatgacgggttgggattcaaaggtaatttgttg 156706  T
Q  492 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  156707 gtttcccccctatatatagttgatgaaacttgcatcattttcatctc 156753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 20548491 - 20548381
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20548491 gaggtattttaaaatacctccctgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 20548392  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  20548391 ggggtatgaca 20548381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 50187895 - 50187783
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaattttt--cactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || |||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50187895 gaggtattttaaaatacctccctgccgaatttttttcactgaaaaatcagagattgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 50187796  T
Q  379 ttggggtatgaca 391  Q
    |||||||||||||    
T  50187795 ttggggtatgaca 50187783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 19737963 - 19738074
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaattttt-cactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19737963 gaggtattttaaaatacctccctgccgaattttttcactaaaaattcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 19738062  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  19738063 tggggtatgaca 19738074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 25984479 - 25984369
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||  |||| ||||||||||| |||||||| |||||||    
T  25984479 gaggtattttaaaatacctctttgtcgaatttttcactgaaaaatcagagatcaatcagcgtcaaacgacacgtgtcagtgggaccttaggttaaaaatt 25984380  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  25984379 ggggtatgaca 25984369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 3382398 - 3382511
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc--actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || |||||||||   |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  3382398 gaggtattttaaaatacctccctgccgaattttttttactgaaaaatcagagatcgagcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 3382497  T
Q  379 ttggggtatgacag 392  Q
    ||||||||||||||    
T  3382498 ttggggtatgacag 3382511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 323 - 391
Target Start/End: Complemental strand, 20555073 - 20555005
Alignment:
Q  323 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20555073 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20555005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 3389146 - 3389258
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc--actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || |||||||||   |||||||||||| |||||||||||  || ||||||||||||||||||||||||||||||||||    
T  3389146 gaggtattttaaaatacctccatgccgaattttttttactgaaaaatcaaagatcgatcagtatcgagtgacatgtgtcagtggggccttaggtcaaaaa 3389245  T
Q  379 ttggggtatgaca 391  Q
    |||||||||||||    
T  3389246 ttggggtatgaca 3389258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 39534285 - 39534174
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||||||  ||| |||||||||||    
T  39534285 gaggtattttaaaatacctccctgccgaattttttactgaaaaatcagggattgatcagagtcaaatgacacgtgtcagtgggatcttgggtcaaaaatt 39534186  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  39534185 ggggtatgacag 39534174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 47522536 - 47522648
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcaga--gtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||  || ||||||||  ||| |||||| ||||||||||||||    
T  47522536 gaggtattttaaaataccttcctgccgaatttttcactgaaaaatcagagatcaatcagagtgttaagtgacaaatgttagtgggaccttaggtcaaaaa 47522635  T
Q  379 ttggggtatgaca 391  Q
    ||| | |||||||    
T  47522636 ttgagatatgaca 47522648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 22175794 - 22175903
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || ||||||||||  |||||  | | ||  ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  22175794 gaggtattttaaaatacctctctgccgaatttttct-tgaaatgttaaagtccgatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaatt 22175892  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  22175893 ggggtatgaca 22175903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 39745430 - 39745486
Alignment:
Q  335 atcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39745430 atcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 39745486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 16720732 - 16720842
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||  |||||||||||| |||||||  |||||||  |||||| ||  |  ||| ||||||||| ||| |||||||||||||||    
T  16720732 gaggtattttaaaataccttcctgtcgaattttt-actgaaacgtcagagactgatcagggttcaacgacgtgtgtcagtcgggtcttaggtcaaaaatt 16720830  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  16720831 ggggtatgacag 16720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 14925106 - 14924997
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| ||| |||  |||||||| |||||| || ||| |||| ||||||||||| |||||||| |||||||    
T  14925106 gaggtattttaaaatacctccctgccgaattttt-actaaaacgtcagagattgatcagggttaagcgacacgtgtcagtgggaccttaggtaaaaaatt 14925008  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  14925007 ggggtatgaca 14924997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 15580438 - 15580547
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||| ||||||| |||||| |||| ||  |||||| ||||| ||||||| |||||||||  |||||||||||||||    
T  15580438 gaggtattttaaaatacctccctgccga-tttttcattgaaaagtcagggactgatcagggtcaaatgacatgcgtcagtgggatcttaggtcaaaaatt 15580536  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  15580537 ggggtatgaca 15580547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 4619300 - 4619220
Alignment:
Q  311 ttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||| ||||||||||||||| |||||| || || ||||||||||||||||    |||||||||||||||||||||||||    
T  4619300 ttttcagtgaaaaatcagagattgatcagggttaaatgacatgtgtcagtggtattttaggtcaaaaattggggtatgaca 4619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 8657871 - 8657828
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8657871 accttggacattttatttttggacctattgacactttgtttttt 8657828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 16728755 - 16728864
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||  || ||||||||| |||||||  |||||||  |||||| ||  |  ||| ||||||||||||| ||||||| |||||||    
T  16728755 gaggtattttaaaataccttcctgccgaattttt-actgaaacgtcagagactgatcagggttcaacgacgtgtgtcagtggggtcttaggtaaaaaatt 16728853  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  16728854 ggggtatgaca 16728864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 3388875 - 3388918
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  3388875 accttgggcattttatttttggacctattgacactttgtttttt 3388918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38853732 - 38853689
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  38853732 accttgtacattttatttttggacctattgacactttgtttttt 38853689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 39745116 - 39745159
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  39745116 accttgggcattttatttttggacctattgacactttgtttttt 39745159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 4619892 - 4620001
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || |||||||| |||||||||||||||||| |||||| || ||   ||||||||  |||    ||||||| |||||||    
T  4619892 gaggtattttaaaatacctctctgccgaatttt-cactgaaaaatcagagattgatcagggttaaacaacatgtgtttgtgatatcttaggtaaaaaatt 4619990  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  4619991 ggggtatgaca 4620001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 3439731 - 3439629
Alignment:
Q  284 gtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggg 383  Q
    ||||||||||||||||   ||||| |||||  | |||||| |||| ||  |||||| ||||| ||||||| ||||||||| |||||||||||||||||||    
T  3439731 gtattttaaaatacctcactgtcggatttt--attgaaaagtcagggactgatcagtgtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggg 3439634  T
Q  384 gtatg 388  Q
     ||||    
T  3439633 atatg 3439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 393
Target Start/End: Complemental strand, 13100709 - 13100668
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  13100709 tgtgtcagtggggccttaggtcaaaatttggggtatgacagt 13100668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 3382129 - 3382172
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  3382129 accttgggcattttatttttggacctattgacactttatttttt 3382172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8102774 - 8102817
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  8102774 accttgtacattttattttgggacctattgacactttgtttttt 8102817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 15880072 - 15880111
Alignment:
Q  353 gtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  15880072 gtgtcagtgggaccttaggtcaaaaattggggtatgacag 15880111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 391
Target Start/End: Original strand, 55793251 - 55793294
Alignment:
Q  348 gacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  55793251 gacaagtgtcagtgggaccttaggtcaaaaattggggtatgaca 55793294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 10220457 - 10220501
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||    
T  10220457 tgacacgtgtcagtgctgccttaggtcaaaaattggggtatgaca 10220501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 3366162 - 3366051
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||  ||  |||  | |||| || || |||| || ||||| |||||||||  | |||||||||||||||    
T  3366162 gaggtattttaaaatacctccctgccgaattttttgctcgaaaggctgagaccggtcggagttaaatgacacgtgtcagtgctgtcttaggtcaaaaatt 3366063  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  3366062 ggggtatgacag 3366051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8093969 - 8094011
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  8093969 accttgtacattttatttt-ggacctattgacactttgtttttt 8094011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 12427175 - 12427136
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  12427175 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 12427136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19737697 - 19737739
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  19737697 accttgtacattttatttt-ggacctattgacactttgtttttt 19737739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 20548753 - 20548711
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  20548753 accttgtacattttatttt-ggacctattgacactttgtttttt 20548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 41149018 - 41148979
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  41149018 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 41148979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 50188166 - 50188124
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  50188166 accttgtacattttatttt-ggacctattgacactttgtttttt 50188124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 55792922 - 55792964
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  55792922 accttgtacattttatttt-ggacctattgacactttgtttttt 55792964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 3356496 - 3356386
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||  ||  |||  | |||| || || |||| || ||||| |||||||||  | |||||||||||||||    
T  3356496 gaggtattttaaaatacctccctgccgaattttttgctcgaaaggctgagaccggtcggagttaaatgacacgtgtcagtgctgtcttaggtcaaaaatt 3356397  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  3356396 ggggtatgaca 3356386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 20867770 - 20867882
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa--atcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    ||||||||||||||||||| | || | || |||||||||||||  ||||||||| ||||||||||||  |||  | ||| |||||  ||| ||||||||     
T  20867770 gaggtattttaaaatacctctctg-ccaaattttcactgaaaaatatcagagatagatcagagtcaaacgacgcgcgtctgtgggatctttggtcaaaat 20867868  T
Q  379 ttggggtatgacag 392  Q
    || |||||||||||    
T  20867869 ttagggtatgacag 20867882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 22142102 - 22142147
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||    
T  22142102 tgacatgtgtcagtgctgtcttaggtcaaaaattggagtatgacag 22142147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 20842697 - 20842737
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  20842697 tgtgtcagtgggaccttaggtaaaaatttggggtatgacag 20842737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 22154016 - 22154060
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||    
T  22154016 tgacatgtgtcagtgctgtcttaggtcaaaaattggagtatgaca 22154060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 22712464 - 22712424
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||| ||||| ||||||||||||| ||||||||||||||    
T  22712464 tgtgtcggtgggaccttaggtcaaaatttggggtatgacag 22712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 95; Significance: 3e-46; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 23693 - 23583
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23693 gaggtattttaaaatacctccctgtcgaatttttcattgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 23594  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  23593 ggggtatgaca 23583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 345 - 455
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||| ||||||||| | || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  345 gaggtatttcaaaatacctctctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 444  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  445 ggggtatgaca 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 23965 - 23923
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  23965 accttgtacattttatttt-ggacctattgacactttgtttttt 23923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 20092707 - 20092819
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20092707 gaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 20092806  T
Q  380 tggggtatgacag 392  Q
    |||||||||||||    
T  20092807 tggggtatgacag 20092819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 36448359 - 36448249
Alignment:
Q  282 aggtattttaaaatacctttttgtcgaattttt-cactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||   || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36448359 aggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 36448260  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  36448259 ggggtatgaca 36448249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 40014986 - 40014876
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  40014986 gaggtattttaaaatacctccctgccgcatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgggaccttaagtcaaaaatt 40014887  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  40014886 ggggtatgaca 40014876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 36454738 - 36454626
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaattttt-cactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  36454738 gaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtccgtgaggccttaggtcaaaaat 36454639  T
Q  380 tggggtatgacag 392  Q
    |||||||||||||    
T  36454638 tggggtatgacag 36454626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 20099608 - 20099715
Alignment:
Q  285 tattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggg 383  Q
    |||||||||||||||   || |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20099608 tattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggtcaaaaattggg 20099707  T
Q  384 gtatgaca 391  Q
    ||||||||    
T  20099708 gtatgaca 20099715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 23378257 - 23378366
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378257 gaggtattttaaaatacctccctgccgaattttt-actggaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 23378355  T
Q  381 ggggtatgaca 391  Q
    | |||||||||    
T  23378356 gaggtatgaca 23378366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 26186603 - 26186712
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26186603 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaat 26186702  T
Q  380 tggggtatga 389  Q
    ||||||||||    
T  26186703 tggggtatga 26186712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 20639817 - 20639929
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaa-tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   |  |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20639817 gaggtattttaaaatacctccctcccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaat 20639916  T
Q  380 tggggtatgacag 392  Q
    |||||||||||||    
T  20639917 tggggtatgacag 20639929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 25526299 - 25526187
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  25526299 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagattcgagtgacatgtgtcagtggggccttaggtcaaaaat 25526200  T
Q  380 tggggtatgacag 392  Q
    |||||||||||||    
T  25526199 tggggtatgacag 25526187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 25532979 - 25532867
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25532979 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaat 25532880  T
Q  380 tggggtatgacag 392  Q
    |||| ||||||||    
T  25532879 tgggatatgacag 25532867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 15956937 - 15957047
Alignment:
Q  283 ggtattttaaaatacctttttgtcgaatttt--tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||   || ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  15956937 ggtattttaaaatacctccctgccgaatttttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaatt 15957036  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  15957037 ggggtatgaca 15957047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 37048453 - 37048343
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  37048453 gaggtattttaaaatacctctctgccgaatttt-cactgaaaaatcagagatcgatcagagtcaagtgacacgtgtcagtgggatcttaggtcaaaaatt 37048355  T
Q  381 ggggtatgacag 392  Q
     |||||||||||    
T  37048354 tgggtatgacag 37048343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 25042236 - 25042342
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||| |||||||  |  |||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||    
T  25042236 gaggtattttaatataccttcctaccgaatttttcactgaaaaatcagagatcgaacagagtcaagtgacacgtatcagtggagccttaggtcaaaaatt 25042335  T
Q  381 ggggtat 387  Q
     ||||||    
T  25042336 tgggtat 25042342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 11939569 - 11939680
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  11939569 gaggtattttaaaatacctccctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 11939668  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  11939669 ggggtatgacag 11939680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 25041955 - 25041998
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25041955 accttggacattttatttttggacctattgacactttgtttttt 25041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 30249695 - 30249652
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30249695 accttggacattttatttttggacctattgacactttgtttttt 30249652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 22961868 - 22961931
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaa 345  Q
    ||||||||||||||||||| | || |||||||| |||| ||||||||||||||||||||||||||    
T  22961868 gaggtattttaaaatacctctctgccgaatttt-cactaaaaaatcagagatcgatcagagtcaa 22961931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 23349767 - 23349810
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  23349767 accttggacattttatttttggacctattgacactttttttttt 23349810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 25677818 - 25677929
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||| |||||||||   || |||| ||||||||||||  |  |||| ||| ||| || || ||||||||||| ||| | ||||||||||||||||    
T  25677818 gaggtatttcaaaatacctccctgccgaaattttcactgaaaggttggagaccgaacagggttaaatgacatgtgtcggtgtgaccttaggtcaaaaatt 25677917  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  25677918 ggggtatgacag 25677929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 40015273 - 40015230
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  40015273 accttggacattttatttttggacctattgacactttatttttt 40015230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 11953493 - 11953603
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| | |||||| ||    
T  11953493 gaggtattttaaaatacctccctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggaacttggatcaaaattt 11953592  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  11953593 ggggtatgaca 11953603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 26553292 - 26553333
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  26553292 tgtgtcagtgggaccttaggtcaaaaattggggtatgacagt 26553333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 15956682 - 15956718
Alignment:
Q  18 accttggacattttatttttggacctattgacacttt 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  15956682 accttggacattttatttttggacctattgacacttt 15956718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 21696111 - 21696071
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  21696111 tgtgtcagtgggaccttaggtcaaaaattggggtatgacag 21696071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 21688192 - 21688153
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  21688192 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 21688153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 37048739 - 37048696
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||    
T  37048739 accttagacattttattcttggacctattgacactttgtttttt 37048696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 392
Target Start/End: Complemental strand, 29901266 - 29901228
Alignment:
Q  354 tgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  29901266 tgtcagtgggaccttaggtcaaaaattggggtatgacag 29901228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 12387278 - 12387318
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  12387278 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 12387318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 15779770 - 15779810
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  15779770 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 15779810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 17961913 - 17961873
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  17961913 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 17961873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 31525369 - 31525329
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  31525369 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 31525329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 1727853 - 1727895
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  1727853 accttgtacattttatttt-ggacctattgacactttgtttttt 1727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 7794326 - 7794287
Alignment:
Q  353 gtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  7794326 gtgtcagtgggaccttaggtcaaaatttggggtatgacag 7794287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 12395971 - 12396010
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  12395971 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 12396010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 15794005 - 15794044
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  15794005 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 15794044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 17948023 - 17947984
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  17948023 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 17947984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 20099335 - 20099377
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  20099335 accttgtacattttatttt-ggacctattgacactttgtttttt 20099377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 23577467 - 23577506
Alignment:
Q  353 gtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  23577467 gtgtcaatgggaccttaggtcaaaaattggggtatgacag 23577506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 24956524 - 24956566
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  24956524 accttgtacattttatttt-ggacctattgacactttgtttttt 24956566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 24964984 - 24965026
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  24964984 accttgtacattttatttt-ggacctattgacactttgtttttt 24965026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 25533243 - 25533201
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  25533243 accttgtacattttatttt-ggacctattgacactttgtttttt 25533201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 31511245 - 31511206
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  31511245 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 31511206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 36448627 - 36448585
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  36448627 accttgtacattttatttt-ggacctattgacactttgtttttt 36448585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 36455011 - 36454969
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  36455011 accttgtacattttatttt-ggacctattgacactttgtttttt 36454969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 43597741 - 43597783
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  43597741 accttgtacattttatttt-ggacctattgacactttgtttttt 43597783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 43603232 - 43603274
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  43603232 accttgtacattttatttt-ggacctattgacactttgtttttt 43603274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 43608724 - 43608766
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  43608724 accttgtacattttatttt-ggacctattgacactttgtttttt 43608766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 7786476 - 7786438
Alignment:
Q  353 gtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  7786476 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 7786438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 18955172 - 18955114
Alignment:
Q  333 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||| |||| |||||| ||||||||| |  ||| ||||||||||||||||||||||    
T  18955172 cgatcagggtcaggtgacacgtgtcagtgagatcttgggtcaaaaattggggtatgaca 18955114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 22704595 - 22704546
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagaga 331  Q
    ||||||||||||||||||| | ||||||| ||||||||||||| |||||||    
T  22704595 gaggtattttaaaatacctctctgtcgaa-ttttcactgaaaagtcagaga 22704546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 38227830 - 38227880
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagaga 331  Q
    ||||||||||||| ||||| | || |||||||||||||||||| |||||||    
T  38227830 gaggtattttaaagtacctctctgccgaatttttcactgaaaagtcagaga 38227880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 28844308 - 28844268
Alignment:
Q  20 cttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  28844308 cttgtacattttatttt-ggacctattgacactttgtttttt 28844268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 28852918 - 28852878
Alignment:
Q  20 cttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  28852918 cttgtacattttatttt-ggacctattgacactttgtttttt 28852878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 5435751 - 5435791
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| |||| |||||||| ||||||||||||||    
T  5435751 tgtgtcagtgggacctttggtcaaaatttggggtatgacag 5435791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 5449571 - 5449611
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| |||| |||||||| ||||||||||||||    
T  5449571 tgtgtcagtgggacctttggtcaaaatttggggtatgacag 5449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 25526554 - 25526519
Alignment:
Q  25 acattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||| ||||||||||||||||||||||||    
T  25526554 acattttatttt-ggacctattgacactttgtttttt 25526519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 36371315 - 36371355
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||| ||||||||||||| ||||||||||||||    
T  36371315 tgtgttagtgggaccttaggtcaaaatttggggtatgacag 36371355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 36385243 - 36385283
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||| ||||||||||||| ||||||||||||||    
T  36385243 tgtgttagtgggaccttaggtcaaaatttggggtatgacag 36385283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 36995978 - 36996018
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||| ||||||||||||| ||||||||||||||    
T  36995978 tgtgttagtgggaccttaggtcaaaatttggggtatgacag 36996018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 37009916 - 37009956
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||| ||||||||||||| ||||||||||||||    
T  37009916 tgtgttagtgggaccttaggtcaaaatttggggtatgacag 37009956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 8089 - 7980
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8089 gaggtattttaaaatacctccctgccgaattttt-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 7991  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  7990 ggggtatgaca 7980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 14891818 - 14891927
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14891818 gaggtattttaaaatacctccctgccgaattttt-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 14891916  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  14891917 ggggtatgaca 14891927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 20733269 - 20733159
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  20733269 gaggtattttaaaatacctctctgccgaatttt-cactgaaaaatcagagatcgatcagagtcaagtgacacgtgtcaatggggccttaggtcaaaaatt 20733171  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  20733170 ggggtatgacag 20733159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 22162941 - 22163052
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22162941 gaggtattttaaaatacctccatgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgggcccttaggtcaaaaat 22163040  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  22163041 tggggtatgaca 22163052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 15061290 - 15061401
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa-atcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || ||||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  15061290 gaggtattttaaaatacctccctgccgaatttttcattgaaaaaatcagagatcgatcagagttaagtgacacgtgtcagtggggccttaggtcaaaaat 15061389  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  15061390 tggggtatgaca 15061401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 25859229 - 25859340
Alignment:
Q  281 gaggtattttaaaa-tacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||| |||||   || ||||||||| | |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  25859229 gaggtattttaaaaatacctacctgccgaattttttaatgaaaaatcagagatcgatcagagtcgagtgacatgtgacagtggggccttaggtcaaaaat 25859328  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  25859329 tggggtatgaca 25859340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 32025608 - 32025719
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  32025608 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagaatcgagtgacatgtgtcagtggggtcttaggtcaaaaat 32025707  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  32025708 tggggtatgaca 32025719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 20725307 - 20725196
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | ||  ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||    
T  20725307 gaggtattttaaaatacctctctgctgaatttt-cactgaaaaatcagagatcgatcagagtcaagtgacacgtgttagtcgggccttaggtaaaaaatt 20725209  T
Q  381 ggggtatgacagt 393  Q
     ||||||||||||    
T  20725208 tgggtatgacagt 20725196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 20738205 - 20738094
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | ||  ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||    
T  20738205 gaggtattttaaaatacctctctgctgaatttt-cactgaaaaatcagagatcgatcagagtcaagtgacacgtgttagtcgggccttaggtaaaaaatt 20738107  T
Q  381 ggggtatgacagt 393  Q
     ||||||||||||    
T  20738106 tgggtatgacagt 20738094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 22156970 - 22157044
Alignment:
Q  318 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  22156970 tgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtgggcccttaggtcaaaaattggggtatgacag 22157044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 456 - 538
Target Start/End: Original strand, 31970107 - 31970188
Alignment:
Q  456 tttaatgacggtttgggattcaaaggtaatttgttggtttcccccctatatatagttgatgaaacttgcatcattttcatctc 538  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  31970107 tttaatgacggtttgggattcaaagggaatttgttggtttcccctctatatatagttg-ggaaacttgcatcattttcatctc 31970188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 25852984 - 25853096
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaa-tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || ||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||  ||||||    
T  25852984 gaggtattttaaaatacctccctgccgaattttttactgaaaaaattagagatcgatcagagtcgagtgacatgtgtcagtggggccgtaggcaaaaaat 25853083  T
Q  380 tggggtatgacag 392  Q
    || ||||||||||    
T  25853084 tgaggtatgacag 25853096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 31999874 - 31999763
Alignment:
Q  281 gaggtattttaaaatacctttttgtcga-atttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    ||||||||||||||||||| | ||  ||  ||||| |||||||||||||||||||||||||||| ||| ||||||||||  |||  ||||||||||||||    
T  31999874 gaggtattttaaaatacctctctgcagattttttttactgaaaaatcagagatcgatcagagtcgagttacatgtgtcaacgggatcttaggtcaaaaat 31999775  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  31999774 tggggtatgaca 31999763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 32006844 - 32006734
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    ||||||||||||||||||  | || |||||||||  |||||||||||| ||||||||||||||| ||||| |||||||||  ||| ||||||||||||||    
T  32006844 gaggtattttaaaataccactctgccgaatttttttactgaaaaatcacagatcgatcagagtcgagtgatatgtgtcag-cgggtcttaggtcaaaaat 32006746  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  32006745 tggggtatgaca 32006734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 6030956 - 6030847
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||  || ||||||||||| ||  |||||| ||||| ||||||| ||||||||| ||||||||||||||||    
T  6030956 gaggtattttaaaatacctccctgccgaattt--cattgaaaaatcagggactgatcagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaatt 6030859  T
Q  381 ggggtatgacag 392  Q
    |||||| |||||    
T  6030858 ggggtaagacag 6030847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 24487871 - 24487981
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||| ||||| | |||||| |||| ||  ||| || ||||| ||||||| ||||||||| ||||||||||||||||    
T  24487871 gaggtattttaaaatacctcactgccgatttttttattgaaaagtcagggactgattagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaatt 24487970  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  24487971 ggggtatgaca 24487981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 12307627 - 12307738
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  12307627 gaggtattttaaaatacctacctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 12307726  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  12307727 ggggtatgacag 12307738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 23816637 - 23816743
Alignment:
Q  285 tattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggg 384  Q
    ||||| ||||||||||| || |||| ||||||||||||| |  |||| ||| ||| || || |||| |||||| ||| | ||||||||||||||||||||    
T  23816637 tatttcaaaatacctttctgccgaagttttcactgaaaagttggagaccgaacagggtaaaatgacgtgtgtcggtgtgaccttaggtcaaaaattgggg 23816736  T
Q  385 tatgaca 391  Q
    |||||||    
T  23816737 tatgaca 23816743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 22162675 - 22162723
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttttttggacac 67  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  22162675 accttgtacattttatttt-ggacctattgacactttgttttttggacac 22162723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 32000143 - 32000107
Alignment:
Q  18 accttggacattttatttttggacctattgacacttt 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  32000143 accttggacattttatttttggacctattgacacttt 32000107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 32007112 - 32007076
Alignment:
Q  18 accttggacattttatttttggacctattgacacttt 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  32007112 accttggacattttatttttggacctattgacacttt 32007076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 12844057 - 12843948
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||| || | |||||||  ||  |||  | ||||||| ||| ||| || ||||| |||||||||  | |||||||||||||||    
T  12844057 gaggtattttaaaatacctttctgccaaatttttg-ctcgaaaggctgagatcggtcaaagttaaatgacacgtgtcagtgctgtcttaggtcaaaaatt 12843959  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  12843958 ggggtatgaca 12843948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 391
Target Start/End: Complemental strand, 45469510 - 45469474
Alignment:
Q  355 gtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||| |||||||||||||||||||||||||||||    
T  45469510 gtcagtgaggccttaggtcaaaaattggggtatgaca 45469474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 15707177 - 15707138
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  15707177 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 15707138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 18433069 - 18433030
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  18433069 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 18433030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 22156672 - 22156714
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  22156672 accttgtacattttatttt-ggacctattgacactttgtttttt 22156714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 23267953 - 23267992
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  23267953 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 23267992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 25858957 - 25858999
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  25858957 accttgtacattttatttt-ggacctattgacactttgtttttt 25858999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 30938673 - 30938631
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  30938673 accttgtacattttatttt-ggacctattgacactttgtttttt 30938631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 382
Target Start/End: Original strand, 31973606 - 31973705
Alignment:
Q  283 ggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgg 382  Q
    ||||||||||||||  ||  || ||||||||||||||||||  | ||||||| ||||||| || ||| | |||||||||  | ||| |||||||||||||    
T  31973606 ggtattttaaaatattttcctgccgaatttttcactgaaaaggctgagatcggtcagagttaaatgatacgtgtcagtgctgtcttgggtcaaaaattgg 31973705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 32025338 - 32025381
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||    
T  32025338 accttgggcattttatttttgaacctattgacactttatttttt 32025381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 39837258 - 39837300
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  39837258 accttgtacattttatttt-ggacctattgacactttgtttttt 39837300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 13385793 - 13385743
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagaga 331  Q
    ||||||||||||| ||| | ||||||||||||||| ||||||| |||||||    
T  13385793 gaggtattttaaagtacttctttgtcgaatttttctctgaaaagtcagaga 13385743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Complemental strand, 16736773 - 16736728
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  16736773 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacag 16736728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 39845302 - 39845342
Alignment:
Q  20 cttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  39845302 cttgtacattttatttt-ggacctattgacactttgtttttt 39845342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 13385993 - 13385965
Alignment:
Q  18 accttggacattttatttttggacctatt 46  Q
    |||||||||||||||||||||||||||||    
T  13385993 accttggacattttatttttggacctatt 13385965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 25642993 - 25642949
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||||||    ||||||||||||||||||||||||||    
T  25642993 tgacatgtgtcagtgctatcttaggtcaaaaattggggtatgaca 25642949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 25852711 - 25852750
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttt 58  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  25852711 accttgtacattttatttt-ggacctattgacactttgttt 25852750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 31968966 - 31969006
Alignment:
Q  283 ggtattttaaaatacctttttgtcgaatttttcactgaaaa 323  Q
    |||||||||||||||||| || |||||||||||| ||||||    
T  31968966 ggtattttaaaataccttcttatcgaatttttcattgaaaa 31969006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 39631550 - 39631590
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||| | ||||||||||||| ||||||||||||||    
T  39631550 tgtgtcagtgagaccttaggtcaaaatttggggtatgacag 39631590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 22346977 - 22346867
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22346977 gaggtattttaaaatacctccctgccgaattttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggacaaaaatt 22346878  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  22346877 ggggtatgaca 22346867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 34132806 - 34132888
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34132806 ttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 34132888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 43906202 - 43906101
Alignment:
Q  287 ttttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggta 386  Q
    |||||||||||||  ||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  43906202 ttttaaaatacctccttgccgaattttt-actgaaaaatcagagatcgatcaggatcaagtgacatgtgtcagtggggccttaggtcaaaaattggggta 43906104  T
Q  387 tga 389  Q
    |||    
T  43906103 tga 43906101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 1858521 - 1858632
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  1858521 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagattgatcatagtcgagtgacatgtgtcagtggggccttaggtcaaaaat 1858620  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  1858621 tggggtatgaca 1858632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 34139088 - 34139199
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaa-tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   |  |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  34139088 gaggtattttaaaatacctcccttccgaatttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttagatcaaaaat 34139187  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  34139188 tggggtatgaca 34139199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 13270841 - 13270954
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  13270841 gaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagactcgagtgacatgtgtcagtggggccttaggtcaaaaat 13270940  T
Q  380 tggggtatgacagt 393  Q
    |||  |||||||||    
T  13270941 tggaatatgacagt 13270954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 28415261 - 28415150
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaa-tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || | || ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  28415261 gaggtattttaaaatacctccctgccaaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtaaaaaat 28415162  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  28415161 tggggtatgaca 28415150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 18779049 - 18779130
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  18779049 ttttttactgaaaaatcagagatcgattagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca 18779130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 281 - 396
Target Start/End: Original strand, 6851966 - 6852083
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc--actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || |||||||||   |||||||||| ||||||||||||||||| || | |||||||||||||| |||||||| |||||    
T  6851966 gaggtattttaaaatacctccctgccgaattttttttactgaaaaattagagatcgatcagagtcgagcggcatgtgtcagtgggaccttaggttaaaaa 6852065  T
Q  379 ttggggtatgacagtgtc 396  Q
    ||||||||||||| ||||    
T  6852066 ttggggtatgacactgtc 6852083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 15683260 - 15683151
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||| | ||||||||||||||||||  |||||  ||||  |||||| || ||  |||  ||||||||||| ||||||||||||||||    
T  15683260 gaggtattttaaaatacttctttgtcgaatttttcact--aaaatgtgagactgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaatt 15683163  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  15683162 ggggtatgacag 15683151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 15820581 - 15820471
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||| ||||||||| || | |||||||||||||||||||| | ||||| |||||||| || || |||||| ||   || ||| |||||||||||||||    
T  15820581 gaggtactttaaaatatctctctgtcgaatttttcactgaaacaacagagttcgatcagggttaaatgacatatgaatgtagggtcttaggtcaaaaatt 15820482  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  15820481 ggggtatgaca 15820471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 7528581 - 7528624
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7528581 accttggacattttatttttggacctattgacactttgtttttt 7528624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 8817989 - 8817878
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||  || |||||||||||||||||  |   ||  ||||||| |||||||||||  ||||||||||  ||| |||||||| ||    
T  8817989 gaggtattttaaaataccttcctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacatgtcagtgggatcttgggtcaaaattt 8817890  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  8817889 ggggtatgacag 8817878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 23878650 - 23878761
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||| ||||||||| | || |||||||||||||||||  |   ||  ||||||| ||||||||||| |||||||||||  ||| |||||||| ||    
T  23878650 gaggtatttcaaaatacctctctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaattt 23878749  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  23878750 ggggtatgacag 23878761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 43005373 - 43005416
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43005373 accttggacattttatttttggacctattgacactttgtttttt 43005416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 8810175 - 8810065
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||  || |||||||||||||||||  |   ||  ||||||| |||||||||||  ||||||||||  ||| |||||||| ||    
T  8810175 gaggtattttaaaataccttcctgccgaatttttcactgaaatgtttaagtccgatcagggtcaagtgacacatgtcagtgggatcttgggtcaaaattt 8810076  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  8810075 ggggtatgaca 8810065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 1858258 - 1858301
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  1858258 accttggacattttatttttggacttattgacactttgtttttt 1858301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 20542592 - 20542629
Alignment:
Q  24 gacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20542592 gacattttatttttggacctattgacactttgtttttt 20542629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 4893638 - 4893694
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatc 337  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||| ||| ||||    
T  4893638 gaggtattttaaaatatctttttgctgaatttttcactgaaaaatcagggattgatc 4893694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 42631285 - 42631325
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  42631285 tgtgtcagtgggaccttaggtcaaaaattggggtatgacag 42631325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 46299609 - 46299656
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttttttggaca 66  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  46299609 accttggacattt-atttttggacctattgacactttgtttttttgaca 46299656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18156841 - 18156884
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  18156841 accttggacattttatttttggacctatgaacactttgtttttt 18156884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 34363137 - 34363207
Alignment:
Q  322 aaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| |||  ||||||  |||  |||||||||||| ||| |||||||||||||||||||||||    
T  34363137 aaatcagagatcaatcccagtcaaacgacgcgtgtcagtggggtcttgggtcaaaaattggggtatgacag 34363207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 393
Target Start/End: Complemental strand, 4847209 - 4847168
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  4847209 tgtgtcagtgggaccttaggtcaaaatttggggtatgacagt 4847168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 9474274 - 9474234
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  9474274 tgtgtcagtggagccttaggtcaaaatttggggtatgacag 9474234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 15767129 - 15767173
Alignment:
Q  348 gacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||    
T  15767129 gacacgtgttagtgggaccttaggtcaaaaattggggtatgacag 15767173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 6113681 - 6113642
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  6113681 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 6113642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 9460484 - 9460445
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  9460484 tgtgtcagtggagccttaggtcaaaatttggggtatgaca 9460445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Complemental strand, 17462928 - 17462893
Alignment:
Q  366 cttaggtcaaaaattggggtatgacagtgtcaatga 401  Q
    |||||||||||||||| |||||||||||||||||||    
T  17462928 cttaggtcaaaaattgtggtatgacagtgtcaatga 17462893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Original strand, 17590286 - 17590321
Alignment:
Q  366 cttaggtcaaaaattggggtatgacagtgtcaatga 401  Q
    |||||||||||||||| |||||||||||||||||||    
T  17590286 cttaggtcaaaaattgtggtatgacagtgtcaatga 17590321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 34132509 - 34132551
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  34132509 accttgtacattttatttt-ggacctattgacactttgtttttt 34132551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 34138821 - 34138863
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  34138821 accttgtacattttatttt-ggacctattgacactttgtttttt 34138863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 44413001 - 44413044
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||    
T  44413001 acctttgacattttatttttggatctattgacactttatttttt 44413044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 809807 - 809917
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || |||||||||  ||  |||  | |||| || || |||| || ||||| |||||||||  | |||||||||||||||    
T  809807 gaggtattttaaaatacctccctgccgaattttttgctcgaaaggctgagaccggtcggagttaaatgacacgtgtcagtgctgtcttaggtcaaaaatt 809906  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  809907 ggggtatgaca 809917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 8913413 - 8913455
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa 323  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  8913413 gaggtattttaaaatacctctctgccgaatttttcactgaaaa 8913455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 36898463 - 36898425
Alignment:
Q  353 gtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  36898463 gtgtcagtgggaccttaagtcaaaaattggggtatgaca 36898425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 46462019 - 46462061
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaa 323  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  46462019 gaggtattttaaaatacctttctgccgaatttttctctgaaaa 46462061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 3424692 - 3424737
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  3424692 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacag 3424737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 4891369 - 4891414
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  4891369 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacag 4891414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 3433023 - 3433067
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  3433023 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 3433067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 16388561 - 16388601
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||| ||||||||||||| ||||||||||||||    
T  16388561 tgtgttagtgggaccttaggtcaaaatttggggtatgacag 16388601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 392
Target Start/End: Original strand, 17016388 - 17016420
Alignment:
Q  360 tggggccttaggtcaaaaattggggtatgacag 392  Q
    |||| ||||||||||||||||||||||||||||    
T  17016388 tgggaccttaggtcaaaaattggggtatgacag 17016420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 30365040 - 30365080
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  30365040 tgtgtcagtgggatcttaggtcaaaatttggggtatgacag 30365080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 37286011 - 37285967
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  37286011 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 37285967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 46461807 - 46461839
Alignment:
Q  20 cttggacattttatttttggacctattgacact 52  Q
    |||||| ||||||||||||||||||||||||||    
T  46461807 cttggatattttatttttggacctattgacact 46461839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 96863 - 96782
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  96863 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 96782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 65949 - 65838
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaattttt-cactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  65949 gaggtattttaaaatacctccctgccgaattttttcaatgaaaaatcagagatcgatcagagtcaagtgacatgtgtgagtggggccttaggtcaaaaat 65850  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  65849 tggggtatgaca 65838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 66185 - 66143
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  66185 accttgtacattttatttt-ggacctattgacactttgtttttt 66143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1922 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold1922
Description:

Target: scaffold1922; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 282 - 391
Target Start/End: Original strand, 171 - 281
Alignment:
Q  282 aggtattttaaaatacctttttgtcgaa-tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  171 aggtattttaaaatacctcccagccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggcattaggtcaaaaatt 270  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  271 ggggtatgaca 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 9119 - 9228
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9119 gaggtattttaaaatacctccctgccgaattttt-attgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgaggccttaggtcaaaaatt 9217  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  9218 ggggtatgaca 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 14208 - 14099
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14208 gaggtattttaaaatacctccctgccgaattttt-actggaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 14110  T
Q  381 ggggtatgaca 391  Q
    | |||||||||    
T  14109 gaggtatgaca 14099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 22127 - 22046
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22127 ttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 22046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 89828 - 89937
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttt-tcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    |||||||||||||||||||   || |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  89828 gaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgataagagtcaagtgacatatgtcagtggggccttaggtcaaaaat 89927  T
Q  380 tggggtatga 389  Q
    ||||||||||    
T  89928 tggggtatga 89937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 89557 - 89599
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  89557 accttgtacattttatttt-ggacctattgacactttgtttttt 89599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 6279 - 6386
Alignment:
Q  285 tattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggg 383  Q
    |||||||||||||||   || |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6279 tattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggacaaaaattggg 6378  T
Q  384 gtatgaca 391  Q
    ||||||||    
T  6379 gtatgaca 6386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 76; Significance: 7e-35; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 7785 - 7864
Alignment:
Q  312 tttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7785 tttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggtcaaaaattggggtatgaca 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 7480 - 7520
Alignment:
Q  20 cttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  7480 cttgtacattttatttt-ggacctattgacactttgtttttt 7520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 7597 - 7706
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7597 gaggtattttaaaatacctccctgccgaattttt-attgaaaaatcagagatcgatcagagtcaagtgacaagtgtcagtggggccttaggtcaaaaatt 7695  T
Q  381 ggggtatgaca 391  Q
     ||||||||||    
T  7696 agggtatgaca 7706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 7301 - 7344
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7301 accttggacattttatttttggacctattgacactttgtttttt 7344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 38583 - 38664
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38583 ttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 38664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 38283 - 38325
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  38283 accttgtacattttatttt-ggacctattgacactttgtttttt 38325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 27700 - 27781
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27700 ttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 27781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 41220 - 41330
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| || ||  |||  |||||||||||  |||||||||||||||    
T  41220 gaggtattttaaaatacctctctgtcgaatttttcactgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggatcttaggtcaaaaatt 41319  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  41320 ggggtatgaca 41330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 27400 - 27442
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  27400 accttgtacattttatttt-ggacctattgacactttgtttttt 27442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 15755 - 15644
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc-actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 379  Q
    ||||||||||||||||||   | |||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  15755 gaggtattttaaaataccccctcgtcgaatttttttactgaaaaatcatagatcgatcagagtcaagtgacatgtgtcagtggggccttagaacaaaaat 15656  T
Q  380 tggggtatgaca 391  Q
    ||||||||||||    
T  15655 tggggtatgaca 15644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16025 - 15983
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  16025 accttgtacattttatttt-ggacctattgacactttgtttttt 15983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 130 - 242
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttca--ctgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || ||||||||| |  ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  130 gaggtattttaaaatacctccctgccgaattttttatactgaaaaatcagagatcgatcagagtcgagtgacaagtgtcagtgaggccttaggtcaaaaa 229  T
Q  379 ttggggtatgaca 391  Q
    |||||||||||||    
T  230 ttggggtatgaca 242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 10420 - 10339
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  10420 ttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca 10339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 19845 - 19764
Alignment:
Q  310 tttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  19845 ttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca 19764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 86650 - 86762
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttc--actgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || |||||||||   ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  86650 gaggtattttaaaatacctccctgccgaattttttttactaaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 86749  T
Q  379 ttggggtatgaca 391  Q
    || ||||||||||    
T  86750 ttagggtatgaca 86762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 11580 - 11470
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| |||||||| ||||||| |||||| |||| ||  |||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  11580 gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgttagtgggtccttaggtcaaaaatt 11481  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  11480 ggggtatgaca 11470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 1370 - 1434
Alignment:
Q  318 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgg 382  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1370 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattgg 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 29068 - 29180
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||| ||||||||| | || ||||||||||||||||||||||||||| |||||| || ||  |||  ||||||||||| ||||||||||||||||    
T  29068 gaggtatttcaaaatacctctctgccgaatttttcactgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaatt 29167  T
Q  381 ggggtatgacagt 393  Q
    || ||||||||||    
T  29168 ggagtatgacagt 29180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 880 - 769
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||||| ||||||||||||||| |||||| || ||  |||  ||||||||||| ||||||||||||||||    
T  880 gaggtattttaaaatacctccctgccgaatttttcattgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaatt 781  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  780 ggggtatgacag 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 3446 - 3336
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   ||||| |||||| | |||||| ||| | || ||||||||||||   ||  ||||||||||| ||||||||||||||||    
T  3446 gaggtattttaaaatacctccctgtcggattttttattgaaaagtcaaatatggatcagagtcaaacaacgcgtgtcagtgggaccttaggtcaaaaatt 3347  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  3346 ggggtatgaca 3336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 15926 - 15816
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   ||||| |||||| | |||||| ||| | || ||||||||||||   ||  ||||||||||| ||||||||||||||||    
T  15926 gaggtattttaaaatacctccctgtcggattttttattgaaaagtcaaatatggatcagagtcaaacaacgcgtgtcagtgggaccttaggtcaaaaatt 15827  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  15826 ggggtatgaca 15816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 16493 - 16603
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||||| ||||||||||||||| |||||| || ||  |||  ||||||||||| ||||||||||||||||    
T  16493 gaggtattttaaaatacctccctgccgaatttttcattgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaatt 16592  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  16593 ggggtatgaca 16603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 281 - 395
Target Start/End: Original strand, 38029 - 38142
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||| | |||||||||||||  |||||  | | ||  ||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  38029 gaggtattttaaaatacctctctgtcgaatttttct-tgaaatgttaaagtccgaccagggtcaagtgacacgtgtcagtggggccttaggtcaaaaatt 38127  T
Q  381 ggggtatgacagtgt 395  Q
    |||||||||||||||    
T  38128 ggggtatgacagtgt 38142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 33992 - 33952
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  33992 tgtgtcagtgggaccttaggtcaaaatttggggtatgacag 33952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 20251 - 20212
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  20251 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 20212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 10503 - 10393
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||| ||||||||||||||||||| | || |||||||||||||||||||||  |||||| || ||  |||  ||||| ||||| |||||||| |||||||    
T  10503 gaggcattttaaaatacctttttgccaaaattttcactgaaaaatcagagagtgatcagggttaaacgacgcgtgtctgtgggaccttaggtaaaaaatt 10404  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  10403 ggggtatgaca 10393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 30656 - 30766
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || ||||||||| ||| |||  |||||||| ||| || || ||| |||| ||||||||||| ||||||||||||||||    
T  30656 gaggtattttaaaatacctccctgccgaattttt-actaaaacgtcagagattgattagggttaagcgacacgtgtcagtgggaccttaggtcaaaaatt 30754  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  30755 ggggtatgacag 30766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 41621 - 41731
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||| ||   || ||||||||| ||| |||  |||||||| ||| || || ||| |||| |||| |||||| ||||||||||||||||    
T  41621 gaggtattttaaaatagctccctgccgaattttt-actaaaacgtcagagattgattagggttaagcgacacgtgttagtgggaccttaggtcaaaaatt 41719  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  41720 ggggtatgacag 41731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 2579 - 2471
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||| ||||||||   |||||||||||  | | |||| |||| ||  |||||| ||||| ||||||| ||||||||| ||||||||||||||||    
T  2579 gaggtatttttaaatacctcactgtcgaatttt--attaaaaagtcagggactgatcagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaatt 2482  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  2481 ggggtatgaca 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 39902 - 39945
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39902 accttggacattttatttttggacctattgacactttgtttttt 39945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 3875 - 3765
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||| |||||||  ||| ||||||||| ||| |||  |||||||| |||||| || ||| ||||  ||| |||||| ||||||||||||||||    
T  3875 gaggtattttacaatacctcattgccgaattttt-actaaaacgtcagagattgatcagggttaagcgacacatgttagtgggcccttaggtcaaaaatt 3777  T
Q  381 ggggtatgacag 392  Q
    ||||||||||||    
T  3776 ggggtatgacag 3765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 392
Target Start/End: Original strand, 8329 - 8439
Alignment:
Q  282 aggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattg 381  Q
    |||||||| ||||||||| | ||  ||| ||||||||||||| |  |||| ||| ||| || || ||||||||||| ||| | |||||||||||||||||    
T  8329 aggtatttcaaaatacctctctgctgaaattttcactgaaaagttggagaccgaacagggttaaatgacatgtgtcggtgtgaccttaggtcaaaaattg 8428  T
Q  382 gggtatgacag 392  Q
    |||||||||||    
T  8429 gggtatgacag 8439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 1081 - 1121
Alignment:
Q  21 ttggacattttatttttggacctattgacactttgtttttt 61  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1081 ttggacattttatttttggacctattgacactttgtttttt 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 325 - 436
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||| || |||||||||  ||  |||| | |||| || || |||| || ||||| |||||||||  | |||||||||||||||    
T  325 gaggtattttaaaatacctttctgccgaattttttgctcgaaaagctgagaccggtcggagttaaatgacacgtgtcagtgctgtcttaggtcaaaaatt 424  T
Q  381 ggggtatgacag 392  Q
    ||| ||||||||    
T  425 gggatatgacag 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 11134 - 11026
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    ||||||||||||||||||||  || |||||||||||||||||  |  |||| ||||||| || || ||||  ||||||||| |  ||| |||||||||||    
T  11134 gaggtattttaaaataccttcctgccgaatttttcactgaaacgt--gagaccgatcagggttaaatgacgcgtgtcagtgagatcttgggtcaaaaatt 11037  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  11036 ggggtatgaca 11026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 33430 - 33481
Alignment:
Q  17 caccttggacattttatttttggacctattgacacttt-gttttttggacac 67  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  33430 caccttggacatattatttttggacctattgacactttggttttttggacac 33481  T

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Target: scaffold1888 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1888
Description:

Target: scaffold1888; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 1005 - 1115
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||||   || | |||||||||||||||  | | ||   |||||| ||||||||||| ||||| |||||  ||| |||||||||||    
T  1005 gaggtattttaaaatacctccctgccaaatttttcactgaaatgttaaagtctgatcagggtcaagtgacacgtgtcggtgggatcttgggtcaaaaatt 1104  T
Q  381 ggggtatgaca 391  Q
    |||||||||||    
T  1105 ggggtatgaca 1115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 9255 - 9337
Alignment:
Q  309 atttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||| |||||| | || ||  |||||| ||||| ||||||| ||||||| | |||||||||||||||||||||||||||    
T  9255 atttttcattgaaaagttagggactgatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgaca 9337  T

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Target: scaffold0755 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 1002 - 962
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  1002 tgtgtcagtggggccttaggtcaaaatttggggtatgacag 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 17799 - 17839
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  17799 tgtgtcagtgggaccttaggtcaaaaattggggtatgacag 17839  T

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Target: scaffold0068; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 25718 - 25757
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  25718 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 25757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 9282 - 9240
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgtttttt 61  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  9282 accttggacattttatttt-ggacctattgacactttgtttttt 9240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 391
Target Start/End: Original strand, 150634 - 150689
Alignment:
Q  336 tcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||||| || |||||||||||||||  | ||||||||||||||||||||||||||    
T  150634 tcagagttaaatgacatgtgtcagtgttgtcttaggtcaaaaattggggtatgaca 150689  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 106448 - 106526
Alignment:
Q  306 cgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggg 384  Q
    |||||||||||||||||| |||||||  |||||| | |||  |||  |||||||||||| ||| |||||||||||||||    
T  106448 cgaatttttcactgaaaagtcagagactgatcagggccaaacgacgcgtgtcagtggggtcttgggtcaaaaattgggg 106526  T

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Target: scaffold1719 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1719
Description:

Target: scaffold1719; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 17 - 58
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  17 tgtgtcagtgggaccttaggtcaaaatttggggtatgacagt 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 1871 - 1983
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagaga-tcg-atcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || ||||||||| |||||||  ||||||| ||  ||||| || || ||||  ||||||||| | ||||||||||||||    
T  1871 gaggtattttaaaatacctccctgccgaattttt-actgaaatgtcagagactcttatcagggttaaatgacgcgtgtcagtgagaccttaggtcaaaaa 1969  T
Q  379 ttggggtatgacag 392  Q
    ||||||||||||||    
T  1970 ttggggtatgacag 1983  T

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Target: scaffold0503; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 6438 - 6550
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagaga-tcg-atcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || ||||||||| |||||||  ||||||| ||  ||||| || || ||||  ||||||||| | ||||||||||||||    
T  6438 gaggtattttaaaatacctccctgccgaattttt-actgaaatgtcagagactcttatcagggttaaatgacgcgtgtcagtgagaccttaggtcaaaaa 6536  T
Q  379 ttggggtatgacag 392  Q
    ||||||||||||||    
T  6537 ttggggtatgacag 6550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 4774 - 4859
Alignment:
Q  306 cgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||| ||||||||||||| |  |||| ||| ||| || || ||||||||||| ||| | ||||||||||||||||| |||||||||    
T  4774 cgaaattttcactgaaaagttggagaccgaacagggttaaatgacatgtgtcggtgtgaccttaggtcaaaaattgtggtatgaca 4859  T

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Target: scaffold0920 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 623 - 591
Alignment:
Q  282 aggtattttaaaatacctttttgtcgaattttt 314  Q
    |||||||||||||||||||||||||||||||||    
T  623 aggtattttaaaatacctttttgtcgaattttt 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 9360 - 9404
Alignment:
Q  348 gacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||| |||||||||||  |||||||||||||||||||||||||||    
T  9360 gacaagtgtcagtgggaacttaggtcaaaaattggggtatgacag 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 32915 - 32955
Alignment:
Q  18 accttggacattttatttttggacctattgacactttgttt 58  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  32915 accttggacatttattttttggacctattgacactttgttt 32955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1312 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1312
Description:

Target: scaffold1312; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 342
Target Start/End: Complemental strand, 1656 - 1625
Alignment:
Q  311 ttttcactgaaaaatcagagatcgatcagagt 342  Q
    ||||||||||||||||||||||||||||||||    
T  1656 ttttcactgaaaaatcagagatcgatcagagt 1625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 2800 - 2839
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  2800 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 2839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 1754 - 1715
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  1754 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 1715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 9209 - 9248
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgaca 391  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  9209 tgtgtcagtgggaccttaggtcaaaatttggggtatgaca 9248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 391
Target Start/End: Original strand, 2863 - 2972
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 380  Q
    |||||||||||||||||| |  || ||||||||| ||| |||  |||||||| |||||| || ||| ||||  |||||||| | ||||| |||| |||||    
T  2863 gaggtattttaaaataccctcctgccgaattttt-actaaaacgtcagagattgatcagggttaagcgacacatgtcagtgagaccttatgtcagaaatt 2961  T
Q  381 ggggtatgaca 391  Q
     ||||||||||    
T  2962 agggtatgaca 2972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 38567 - 38605
Alignment:
Q  354 tgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  38567 tgtcagtgggaccttaggtcaaaaattcgggtatgacag 38605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1575 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1575
Description:

Target: scaffold1575; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 66 - 25
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaatttttcactgaaa 322  Q
    ||||||||||||||||||||  || |||||||||||||||||    
T  66 gaggtattttaaaataccttcctgccgaatttttcactgaaa 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 20904 - 20791
Alignment:
Q  281 gaggtattttaaaatacctttttgtcgaattt-ttcactgaaaaa-tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 378  Q
    |||||||||||||||||||   || | ||||| |||| ||||||| | ||||||  ||||| || ||  |||| |||||||||||  ||||||| |||||    
T  20904 gaggtattttaaaatacctccctgcctaatttgttcattgaaaaaataagagattaatcagggttaaacgacacgtgtcagtgggatcttaggtaaaaaa 20805  T
Q  379 ttggggtatgacag 392  Q
    ||||||||||||||    
T  20804 ttggggtatgacag 20791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Complemental strand, 27047 - 27002
Alignment:
Q  347 tgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  27047 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacag 27002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 393
Target Start/End: Original strand, 14677 - 14705
Alignment:
Q  365 ccttaggtcaaaaattggggtatgacagt 393  Q
    |||||||||||||||||||||||||||||    
T  14677 ccttaggtcaaaaattggggtatgacagt 14705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 20711 - 20679
Alignment:
Q  359 gtggggccttaggtcaaaaattggggtatgaca 391  Q
    ||||| |||||||||||||||||||||||||||    
T  20711 gtgggaccttaggtcaaaaattggggtatgaca 20679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 202701 - 202741
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| |||| |||||||| ||||||||||||||    
T  202701 tgtgtcagtgggacctttggtcaaaatttggggtatgacag 202741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 208778 - 208818
Alignment:
Q  352 tgtgtcagtggggccttaggtcaaaaattggggtatgacag 392  Q
    |||||||||||| |||| |||||||| ||||||||||||||    
T  208778 tgtgtcagtgggacctttggtcaaaatttggggtatgacag 208818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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