View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15412_high_2 (Length: 295)

Name: NF15412_high_2
Description: NF15412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15412_high_2
NF15412_high_2
[»] chr5 (21 HSPs)
chr5 (1-280)||(14495548-14495822)
chr5 (3-57)||(21589349-21589403)
chr5 (1-57)||(6844788-6844844)
chr5 (1-57)||(16773866-16773922)
chr5 (4-56)||(31074294-31074346)
chr5 (1-34)||(26078035-26078068)
chr5 (1-53)||(3315274-3315326)
chr5 (1-57)||(7918430-7918486)
chr5 (1-57)||(17028225-17028281)
chr5 (1-57)||(25627116-25627171)
chr5 (1-56)||(37258328-37258383)
chr5 (3-57)||(12877754-12877808)
chr5 (1-47)||(14285220-14285266)
chr5 (3-57)||(19043519-19043572)
chr5 (3-57)||(21549099-21549152)
chr5 (7-56)||(4793042-4793091)
chr5 (4-57)||(29075843-29075896)
chr5 (1-54)||(34984865-34984918)
chr5 (1-53)||(18595966-18596018)
chr5 (1-53)||(18974019-18974071)
chr5 (1-57)||(30000175-30000231)
[»] chr7 (27 HSPs)
chr7 (1-57)||(21558187-21558243)
chr7 (6-57)||(42261006-42261057)
chr7 (1-57)||(39631903-39631959)
chr7 (1-57)||(17040973-17041029)
chr7 (1-57)||(26459371-26459427)
chr7 (1-57)||(30579394-30579450)
chr7 (1-57)||(37473673-37473729)
chr7 (1-56)||(31835251-31835306)
chr7 (1-56)||(43215243-43215298)
chr7 (3-57)||(43590968-43591022)
chr7 (1-57)||(15905635-15905691)
chr7 (1-57)||(18363755-18363810)
chr7 (1-57)||(33222429-33222485)
chr7 (1-56)||(29785263-29785318)
chr7 (1-56)||(37162312-37162367)
chr7 (1-56)||(41975946-41976001)
chr7 (4-57)||(9608590-9608643)
chr7 (4-57)||(9836162-9836215)
chr7 (4-57)||(26199571-26199624)
chr7 (1-54)||(38374563-38374616)
chr7 (1-34)||(41907626-41907659)
chr7 (1-57)||(17113854-17113910)
chr7 (1-57)||(25655189-25655245)
chr7 (4-56)||(33181172-33181224)
chr7 (1-57)||(41487418-41487474)
chr7 (1-57)||(41519226-41519281)
chr7 (1-53)||(42712017-42712069)
[»] chr3 (30 HSPs)
chr3 (1-57)||(10969878-10969934)
chr3 (1-57)||(2667921-2667977)
chr3 (1-57)||(46552990-46553046)
chr3 (1-57)||(47454578-47454634)
chr3 (1-57)||(11642170-11642226)
chr3 (1-57)||(30311365-30311421)
chr3 (1-57)||(40777071-40777127)
chr3 (1-57)||(44743816-44743872)
chr3 (1-57)||(52769944-52770000)
chr3 (1-56)||(28703366-28703421)
chr3 (1-56)||(36720440-36720495)
chr3 (1-56)||(37788428-37788482)
chr3 (3-57)||(14339671-14339725)
chr3 (1-57)||(40063678-40063735)
chr3 (1-57)||(3427515-3427570)
chr3 (1-57)||(40268547-40268603)
chr3 (1-57)||(44069817-44069873)
chr3 (1-56)||(15048023-15048078)
chr3 (3-56)||(4222202-4222255)
chr3 (1-34)||(15566612-15566645)
chr3 (1-34)||(20501755-20501788)
chr3 (1-34)||(25289827-25289860)
chr3 (1-34)||(49258375-49258408)
chr3 (1-50)||(53413004-53413053)
chr3 (1-57)||(8075088-8075144)
chr3 (1-57)||(10445100-10445156)
chr3 (2-57)||(16354855-16354908)
chr3 (1-57)||(27093323-27093378)
chr3 (1-53)||(30510164-30510216)
chr3 (1-57)||(46518687-46518743)
[»] chr1 (30 HSPs)
chr1 (1-57)||(29753708-29753764)
chr1 (1-57)||(2799921-2799977)
chr1 (1-57)||(40810526-40810582)
chr1 (1-56)||(33700735-33700790)
chr1 (6-56)||(3799970-3800020)
chr1 (3-57)||(6650656-6650710)
chr1 (1-57)||(8177143-8177199)
chr1 (1-57)||(11063615-11063671)
chr1 (2-56)||(44961825-44961879)
chr1 (1-57)||(6122853-6122909)
chr1 (1-57)||(14787297-14787353)
chr1 (1-57)||(21547441-21547497)
chr1 (1-57)||(44126454-44126510)
chr1 (9-56)||(3679276-3679323)
chr1 (2-57)||(4566608-4566662)
chr1 (1-56)||(36371529-36371584)
chr1 (7-57)||(23745187-23745237)
chr1 (1-34)||(8077698-8077731)
chr1 (1-54)||(8904473-8904526)
chr1 (1-34)||(9500468-9500501)
chr1 (1-34)||(15059515-15059548)
chr1 (1-34)||(18646904-18646937)
chr1 (1-34)||(25237102-25237135)
chr1 (3-56)||(52116743-52116796)
chr1 (1-57)||(10526882-10526938)
chr1 (1-57)||(12587329-12587384)
chr1 (1-57)||(17745218-17745273)
chr1 (1-57)||(19940833-19940889)
chr1 (1-53)||(40814373-40814425)
chr1 (1-53)||(51814553-51814605)
[»] chr4 (38 HSPs)
chr4 (3-57)||(7292759-7292813)
chr4 (1-57)||(23378015-23378071)
chr4 (1-57)||(30938180-30938236)
chr4 (1-57)||(4249236-4249292)
chr4 (1-57)||(7949415-7949471)
chr4 (1-57)||(15180797-15180853)
chr4 (1-57)||(37109312-37109368)
chr4 (1-57)||(38869827-38869883)
chr4 (1-57)||(47386752-47386808)
chr4 (1-57)||(52254365-52254421)
chr4 (1-56)||(19680750-19680805)
chr4 (3-57)||(2732055-2732109)
chr4 (4-57)||(6666387-6666440)
chr4 (4-57)||(26356879-26356932)
chr4 (1-57)||(7382056-7382112)
chr4 (1-57)||(16581752-16581808)
chr4 (1-57)||(28635755-28635811)
chr4 (1-53)||(39509129-39509181)
chr4 (1-57)||(49262645-49262701)
chr4 (1-57)||(49938797-49938853)
chr4 (10-57)||(12793872-12793919)
chr4 (1-56)||(46295156-46295211)
chr4 (1-35)||(22096591-22096625)
chr4 (3-56)||(2184994-2185047)
chr4 (3-36)||(2622377-2622410)
chr4 (1-34)||(9517754-9517787)
chr4 (1-34)||(34844871-34844904)
chr4 (1-62)||(37980104-37980165)
chr4 (1-34)||(40058965-40058998)
chr4 (1-34)||(49287909-49287942)
chr4 (8-57)||(50483071-50483120)
chr4 (2-34)||(5609315-5609347)
chr4 (1-57)||(8030165-8030221)
chr4 (1-57)||(9693459-9693515)
chr4 (4-36)||(12448770-12448802)
chr4 (1-57)||(29195153-29195209)
chr4 (1-57)||(37274420-37274476)
chr4 (3-51)||(43623411-43623459)
[»] chr8 (19 HSPs)
chr8 (1-57)||(6536579-6536635)
chr8 (1-57)||(16852399-16852455)
chr8 (1-57)||(18540357-18540413)
chr8 (1-58)||(28787456-28787513)
chr8 (1-57)||(11819835-11819891)
chr8 (1-57)||(33017273-33017328)
chr8 (1-56)||(968421-968476)
chr8 (2-57)||(8794307-8794361)
chr8 (5-56)||(28560669-28560720)
chr8 (1-56)||(31408084-31408139)
chr8 (3-57)||(16317671-16317725)
chr8 (3-56)||(35851863-35851916)
chr8 (1-54)||(42740553-42740606)
chr8 (1-34)||(43594302-43594335)
chr8 (1-57)||(7347896-7347952)
chr8 (1-57)||(8485058-8485114)
chr8 (1-57)||(12988487-12988542)
chr8 (1-57)||(29915881-29915937)
chr8 (1-57)||(44780075-44780131)
[»] chr6 (15 HSPs)
chr6 (1-57)||(11306135-11306191)
chr6 (1-57)||(12188264-12188320)
chr6 (1-57)||(24256783-24256839)
chr6 (1-56)||(9583424-9583479)
chr6 (1-56)||(13330146-13330201)
chr6 (1-57)||(18263899-18263955)
chr6 (10-57)||(1056646-1056693)
chr6 (1-56)||(12234469-12234524)
chr6 (3-57)||(20213102-20213156)
chr6 (3-57)||(21418531-21418585)
chr6 (3-57)||(22107125-22107179)
chr6 (2-56)||(32250812-32250866)
chr6 (1-34)||(11448922-11448955)
chr6 (1-54)||(30127459-30127512)
chr6 (1-57)||(8597708-8597764)
[»] chr2 (17 HSPs)
chr2 (1-57)||(2750587-2750643)
chr2 (1-56)||(42922474-42922529)
chr2 (4-57)||(4060175-4060228)
chr2 (3-56)||(6859274-6859327)
chr2 (1-57)||(21213828-21213884)
chr2 (1-57)||(33582032-33582088)
chr2 (1-57)||(34041549-34041605)
chr2 (3-55)||(37971956-37972008)
chr2 (1-56)||(14500336-14500391)
chr2 (1-56)||(40416352-40416407)
chr2 (1-55)||(45026802-45026856)
chr2 (1-34)||(19244168-19244201)
chr2 (1-57)||(19322827-19322883)
chr2 (1-57)||(21303955-21304011)
chr2 (1-57)||(23052484-23052540)
chr2 (5-57)||(30410510-30410562)
chr2 (1-53)||(39764992-39765044)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-56)||(45721-45776)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-57)||(15284-15340)
[»] scaffold0070 (1 HSPs)
scaffold0070 (3-57)||(42482-42535)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-34)||(2695-2728)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-56)||(94935-94988)


Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 14495822 - 14495548
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttcggaagnnnnnnnnttagttttactattgattgaaaaagttaaa 100  Q
    ||||||||| || |||||||||   |||||||||||  ||| |||||||||||||||| ||         ||||||||||||||||||| ||||||||||    
T  14495822 aggtctcagatttgattctctccgatgccaatttagatgggctagtttagcttcttcgaaa-----aaaattagttttactattgattggaaaagttaaa 14495728  T
Q  101 ctttgtcacacaagtcttataaaacggattaagggtttataatacttgattcatttgtattctatatagtttagaaatctgttttgagcatatacacttt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14495727 ctttgtcacacaagtcttataaaacggattaagggtttataatacttgattcatttgtattctatatagtttagaaatctgttttgagcatatacacttt 14495628  T
Q  201 ggttgaaatccaacaaccaatattgatggatcacattaagggtcccacctaaaggatagaagattgatccctaccctttg 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14495627 ggttgaaatccaacaaccaatattgatggatcacattaagggtcccacctaaaggatagaagattgatccctaccctttg 14495548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 21589349 - 21589403
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||    
T  21589349 gtctcaggttcgattccctctggtgccaatttaggtgggctagtttagcttcttc 21589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6844788 - 6844844
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| |||||||||| ||||| ||||||||||||| || ||||||||||||||||    
T  6844788 aggtctaaggttcgattatctctcgtgccaatttaggtggattagtttagcttcttc 6844844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16773866 - 16773922
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||||||  |||||||||||| ||| || ||||||||||||    
T  16773866 aggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagcttcttc 16773922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 31074294 - 31074346
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||| ||||||||||| | || |||||||||||||||    
T  31074294 tctcaggttcgattctctctggtgccaatttaagaggattagtttagcttctt 31074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26078068 - 26078035
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  26078068 aggtctcaggttcgattctctctagtgccaattt 26078035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3315274 - 3315326
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    |||||||||||||||||||| |  |||||||||||||||| ||| ||||||||    
T  3315274 aggtctcaggttcgattctcccaggtgccaatttaggcggattaatttagctt 3315326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7918486 - 7918430
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| |||||||||||||||| ||||||||||  | || ||||||||||||||||    
T  7918486 aggtcttaggttcgattctctctggtgccaatttgaggggtttagtttagcttcttc 7918430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17028281 - 17028225
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| ||||| |||||||| ||||||||| ||| || ||||||||||||    
T  17028281 aggtctcaggtttgattccctctagtgtcaatttaggtgggctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25627116 - 25627171
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||| |||||| |  |||||||||||||||||||    
T  25627116 aggtctcaggttcgattctctctggtgtcaattt-gaggggttagtttagcttcttc 25627171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37258383 - 37258328
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||| |||||||||||||||||| ||| ||||||  | ||||||||||||||||||    
T  37258383 aggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttctt 37258328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 12877754 - 12877808
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||| || | |||||||| ||| || ||||||||||||    
T  12877754 gtctcaggttcgattctctctggtactaatttaggtgggctaatttagcttcttc 12877808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14285220 - 14285266
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtt 47  Q
    ||||||||||||||||||||||| ||||||||||  | |||||||||    
T  14285220 aggtctcaggttcgattctctctggtgccaatttgagggggttagtt 14285266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 19043519 - 19043572
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||| || ||||||||||||||||| |  |||||||||||||||||||    
T  19043519 gtctcaggttcaatcctctctagtgccaattt-gaggggttagtttagcttcttc 19043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 21549152 - 21549099
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| |||||||| |||||||||||||||| |  |||||||||||||||||||    
T  21549152 gtctcaagttcgattttctctagtgccaattt-gaggggttagtttagcttcttc 21549099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 4793091 - 4793042
Alignment:
Q  7 caggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||| | |||||||||||||| ||| || |||||||||||    
T  4793091 caggttcgattctccccagtgccaatttaggtgggctaatttagcttctt 4793042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 29075843 - 29075896
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||| |||||||||||||| ||||||||||||  ||| || ||||||||||||    
T  29075843 tctcatgttcgattctctctggtgccaatttagatgggctaatttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34984865 - 34984918
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 54  Q
    |||||| |||||||||||||||| ||||||||||  | ||||| ||||||||||    
T  34984865 aggtcttaggttcgattctctctggtgccaatttgagggggttggtttagcttc 34984918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18596018 - 18595966
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    |||||| |||||||||| ||||| ||||||||||  | |||||||||||||||    
T  18596018 aggtcttaggttcgattttctctggtgccaatttgagggggttagtttagctt 18595966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18974019 - 18974071
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    |||| ||||||||||||||| || ||||||||||  | |||||||||||||||    
T  18974019 aggtgtcaggttcgattctccctggtgccaatttgagtgggttagtttagctt 18974071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30000175 - 30000231
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||| |||||||  |||||||||| | |||||| |||| |||||||    
T  30000175 aggtctcaggttcgactctctctgatgccaatttaagtgggttaatttaacttcttc 30000231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21558187 - 21558243
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  21558187 aggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 42261057 - 42261006
Alignment:
Q  6 tcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  42261057 tcaggtttgattctctctagtgccaatttaggtgggttagtttagcttcttc 42261006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39631903 - 39631959
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  39631903 aggtctcaggttcgattctctcttgtgccaatttgagggggttagtttagcttcttc 39631959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17041029 - 17040973
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||||| ||||||||||| || |||| | ||||||||||||    
T  17041029 aggtctcaggttcgattctctcaagtgccaatttgggtgggtcaatttagcttcttc 17040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26459427 - 26459371
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||    |||||||||||||||||||    
T  26459427 aggtctcaggttcgattctctctggtgccaatttgaaggggttagtttagcttcttc 26459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30579394 - 30579450
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||| ||||| ||||||||||||| ||| || ||||||||||||    
T  30579394 aggtctcaggttcgattttctctggtgccaatttaggtgggctaatttagcttcttc 30579450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37473673 - 37473729
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| ||| || ||||||||| |||||| ||||||||||||    
T  37473673 aggtctcaggttcgattctccctaatgtcaatttaggtgggttaatttagcttcttc 37473729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31835251 - 31835306
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||||| || || |||||||||| |||||| ||||||||||||||    
T  31835251 aggtctcaggttcgattatccctggtgccaattttggcgggctagtttagcttctt 31835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43215243 - 43215298
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||||||  |||||||||  | ||||||||||||||||||    
T  43215243 aggtctcaggttcgattctctcttatgccaatttgagggggttagtttagcttctt 43215298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 43590968 - 43591022
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||| |||||||||||| ||| ||| || ||||||||||||    
T  43590968 gtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 43591022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15905691 - 15905635
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| ||| || |||||| || |||||| ||||||||||||    
T  15905691 aggtctcaggttcgattctccctaatgtcaatttgggtgggttaatttagcttcttc 15905635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18363755 - 18363810
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| ||||||||||||| ||||||| |  |||||||||||||||||||    
T  18363755 aggtctcaggtttgattctctctagtaccaattt-gaggggttagtttagcttcttc 18363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33222429 - 33222485
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||| ||||||  | |||||||||||| ||||||    
T  33222429 aggtctcaggttcgattctctctggtgtcaatttgagagggttagtttagattcttc 33222485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29785318 - 29785263
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||| |||||||||| ||| ||||||||||  | ||||||||||||||||||    
T  29785318 aggtctcatgttcgattctttctggtgccaatttgagggggttagtttagcttctt 29785263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37162367 - 37162312
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||| |||||||||||||| ||||||||||  | || |||||||||||||||    
T  37162367 aggtctcaagttcgattctctctggtgccaatttgaggggattagtttagcttctt 37162312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41975946 - 41976001
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||| |||||||||||||||||| ||||||| | ||| || |||||||||||    
T  41975946 aggtctcaagttcgattctctctagtgtcaatttaagtgggctaatttagcttctt 41976001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 9608643 - 9608590
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||||||| ||||||  |  |||| |||||||||||||    
T  9608643 tctcaggttcgattctctctagtgtcaatttgaggaggttggtttagcttcttc 9608590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 9836215 - 9836162
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||||||| ||||||  |  |||| |||||||||||||    
T  9836215 tctcaggttcgattctctctagtgtcaatttgaggaggttggtttagcttcttc 9836162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 26199571 - 26199624
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||| |||  ||||||||||| | |||| ||||||||||||    
T  26199571 tctcaggttcgattctccctacagccaatttaggtgagttaatttagcttcttc 26199624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38374616 - 38374563
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 54  Q
    |||||| ||||||||||||| |  ||||||||||||| ||| ||||||||||||    
T  38374616 aggtcttaggttcgattctccccggtgccaatttaggtgggctagtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 41907659 - 41907626
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  41907659 aggtctcaggttcgattctctctggtgccaattt 41907626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17113854 - 17113910
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||| ||||||||||||||  ||| |||||  | |||||||||||||||||||    
T  17113854 aggtctcaagttcgattctctctgatgctaatttgagggggttagtttagcttcttc 17113910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25655245 - 25655189
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| |||||||||||||||||| ||||||||||    ||||| |||||||||||||    
T  25655245 aggtttcaggttcgattctctctggtgccaatttgaaggggttggtttagcttcttc 25655189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 33181224 - 33181172
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||| |||||||| |||||| || ||| || |||||||||||    
T  33181224 tctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41487418 - 41487474
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||  |  ||||||||||||| ||| || ||||||||||||    
T  41487418 aggtctcaggttcgattcttcccggtgccaatttaggtgggctaatttagcttcttc 41487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41519281 - 41519226
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||| |||||||| ||| ||||||||| ||| || ||||||||||||    
T  41519281 aggtctcaggttcgcttctctct-gtgtcaatttaggtgggctaatttagcttcttc 41519226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42712017 - 42712069
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    |||||||| ||||||||||| |||||| ||||||||| ||| || ||||||||    
T  42712017 aggtctcatgttcgattctccctagtgtcaatttaggtgggctaatttagctt 42712069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10969934 - 10969878
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  10969934 aggtctcaggttcgattctctctggtgccaatttaagggggttagtttagcttcttc 10969878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2667921 - 2667977
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||    
T  2667921 aggtctcaggttcgattatctctagtgtcaatttaggtgggctagtttagcttcttc 2667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46552990 - 46553046
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||| ||||||    
T  46552990 aggtctcagattcgattctctctagtgccaatttgggtgggttagtttagtttcttc 46553046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 47454634 - 47454578
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| | | |||||||||||| |||||||||||||||||||    
T  47454634 aggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttc 47454578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11642226 - 11642170
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||| ||| ||||| ||||||| | |||||||||||||||||||    
T  11642226 aggtctcaggttcgattatctttagtgtcaatttaagagggttagtttagcttcttc 11642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30311365 - 30311421
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||| | ||||||||||  | |||||||||||||||||||    
T  30311365 aggtctcaggttcgattctctttggtgccaatttgagggggttagtttagcttcttc 30311421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40777071 - 40777127
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| ||||||||||||||||||||| || ||| |||||||| ||||||    
T  40777071 aggtctcaggtttgattctctctagtgccaatttcggtgggctagtttagtttcttc 40777127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44743872 - 44743816
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||| |||| ||||||||||| || |||||| ||||||||||||    
T  44743872 aggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 52770000 - 52769944
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||| ||||| ||||||||| ||| || ||||||||||||    
T  52770000 aggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttc 52769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28703421 - 28703366
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||||||||||| ||||||||||  |  |||||||||||||||||    
T  28703421 aggtctcaggttcgattctctctggtgccaatttgaggaggttagtttagcttctt 28703366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36720440 - 36720495
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||| |||||||||||||||||||||| ||||||||| ||| | ||||||||||||    
T  36720440 aggtttcaggttcgattctctctagtgtcaatttaggtgggctggtttagcttctt 36720495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37788482 - 37788428
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||||||||||||||||| |  |||||| |||||||||||    
T  37788482 aggtctcaggttcgattctctctagtgccaattt-gaggggttaatttagcttctt 37788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 14339671 - 14339725
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||| |||||||||||| ||| ||| || ||||||||||||    
T  14339671 gtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 14339725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40063678 - 40063735
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt-aggcgggttagtttagcttcttc 57  Q
    |||||||| ||||||||||||| ||||||||||| ||| || ||||||||||||||||    
T  40063678 aggtctcaagttcgattctctccagtgccaatttgagggggtttagtttagcttcttc 40063735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3427570 - 3427515
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||| ||||||||||||||||||||||||  ||  |||||||||||||||||    
T  3427570 aggtctcagattcgattctctctagtgccaatttgagc-agttagtttagcttcttc 3427515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40268547 - 40268603
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| |   ||||||||| || |||||||||||||||||||    
T  40268547 aggtctcaggttcgattctccccgatgccaatttcggtgggttagtttagcttcttc 40268603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44069817 - 44069873
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| |||||| ||  ||||||||||||| ||| |||||||||||||||    
T  44069817 aggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttcttc 44069873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15048078 - 15048023
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||||| ||||| ||||||||||  | ||||||||||| ||||||    
T  15048078 aggtctcaggttcgattatctctggtgccaatttgagggggttagtttaacttctt 15048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 4222202 - 4222255
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||| |||||||||||||||| ||| ||||||||| | ||||||||| ||||||    
T  4222202 gtcttaggttcgattctctctggtgtcaatttaggtgagttagtttaacttctt 4222255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15566645 - 15566612
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    |||||||||||||||||| |||||||||||||||    
T  15566645 aggtctcaggttcgattccctctagtgccaattt 15566612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20501755 - 20501788
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    |||||||||||||||||||||| |||||||||||    
T  20501755 aggtctcaggttcgattctctccagtgccaattt 20501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25289860 - 25289827
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    |||||||||||||||||| |||||||||||||||    
T  25289860 aggtctcaggttcgattccctctagtgccaattt 25289827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49258408 - 49258375
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    |||||||||||||||||| |||||||||||||||    
T  49258408 aggtctcaggttcgattccctctagtgccaattt 49258375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53413004 - 53413053
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttag 50  Q
    ||||||||||||| ||||||||| ||||||||||  | ||||||||||||    
T  53413004 aggtctcaggttcaattctctctggtgccaatttgagggggttagtttag 53413053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8075144 - 8075088
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| ||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  8075144 aggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10445156 - 10445100
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| |||| |||||  | ||| || ||||||||||||    
T  10445156 aggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttcttc 10445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 16354908 - 16354855
Alignment:
Q  2 ggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||||| ||||||| |||   ||| |||||||||||||||    
T  16354908 ggtctcaggttcgattctctctggtgccaaatta--aggggtagtttagcttcttc 16354855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27093378 - 27093323
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| |||||||||| |||||||||| |  ||||||||||| |||||||    
T  27093378 aggtctcaggtttgattctctctggtgccaattt-gaagggttagtttatcttcttc 27093323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30510216 - 30510164
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    ||||||||||||||||||||||||||| |||| || | ||| || ||||||||    
T  30510216 aggtctcaggttcgattctctctagtgtcaatctaagtgggctaatttagctt 30510164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46518687 - 46518743
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| ||||||| ||||||||||  |||||||||  | |||||||||||||||||||    
T  46518687 aggtttcaggtttgattctctctgatgccaatttgagggggttagtttagcttcttc 46518743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29753708 - 29753764
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  29753708 aggtctcaggttcgattctctctggtgccaatttaagagggttagtttagcttcttc 29753764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2799921 - 2799977
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  2799921 aggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 2799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40810526 - 40810582
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  40810526 aggtctcaggttcgattctctctggtgccaatttgagagggttagtttagcttcttc 40810582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33700790 - 33700735
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||    
T  33700790 aggtctcaggttcgattctctctggtgccaatttaagggggttagtttaacttctt 33700735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 3799970 - 3800020
Alignment:
Q  6 tcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  3799970 tcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 6650656 - 6650710
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||    
T  6650656 gtctcaggttcgattctctctggtgtcaatttaggtggattagtttagcttcttc 6650710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8177199 - 8177143
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| |||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  8177199 aggtttcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 8177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11063615 - 11063671
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| |||||||||||||||||||||||||||    |||||||||||||||||||    
T  11063615 aggtcttaggttcgattctctctagtgccaatttgaaggggttagtttagcttcttc 11063671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 44961825 - 44961879
Alignment:
Q  2 ggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||||||||| |||||| || ||| || |||||||||||    
T  44961825 ggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6122853 - 6122909
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  6122853 aggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 6122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14787353 - 14787297
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| ||||||||||||||||||| |  ||||||| | |||||||||||||||||||    
T  14787353 aggtgtcaggttcgattctctctaatatcaatttaagtgggttagtttagcttcttc 14787297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21547497 - 21547441
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| ||||||||||||||||||  |||||||||||| ||| ||||||| |||||||    
T  21547497 aggtttcaggttcgattctctctgatgccaatttaggtgggctagtttaacttcttc 21547441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44126454 - 44126510
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||| || ||||||||||||||||||||||||  || || ||||||||||||    
T  44126454 aggtctcagatttgattctctctagtgccaatttaggtaggctaatttagcttcttc 44126510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 3679323 - 3679276
Alignment:
Q  9 ggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||| ||||||||||  | ||||||||||||||||||    
T  3679323 ggttcgattctctctggtgccaatttgagggggttagtttagcttctt 3679276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 4566608 - 4566662
Alignment:
Q  2 ggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||  || ||||||| | |||||||||||||||||||    
T  4566608 ggtctcaggttcgattctctctgatgtcaatttaag-gggttagtttagcttcttc 4566662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36371529 - 36371584
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||| ||||||||||||||||  |||||||||  | ||||||||||||||||||    
T  36371529 aggtctgaggttcgattctctctgatgccaatttgagggggttagtttagcttctt 36371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 23745187 - 23745237
Alignment:
Q  7 caggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||||||||  | ||| |||||| ||||||||    
T  23745187 caggttcgattctctctagtgccaatttcagtgggctagtttggcttcttc 23745237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8077698 - 8077731
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  8077698 aggtctcaggttcgattctctctggtgccaattt 8077731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8904473 - 8904526
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 54  Q
    |||||||| |||||||||||||| ||||||||||  | ||||||||||| ||||    
T  8904473 aggtctcaagttcgattctctctggtgccaatttgagggggttagtttaacttc 8904526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9500501 - 9500468
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9500501 aggtctcaggttcgattctctctggtgccaattt 9500468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15059548 - 15059515
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  15059548 aggtctcaggttcgattctctctggtgccaattt 15059515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18646904 - 18646937
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  18646904 aggtctcaggttcgattctctctggtgccaattt 18646937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25237135 - 25237102
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    |||||||||||||||||| |||||||||||||||    
T  25237135 aggtctcaggttcgattccctctagtgccaattt 25237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 52116796 - 52116743
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||| |||||| |||||||||||| ||| ||| || |||||||||||    
T  52116796 gtctcaggttcaattctccctagtgccaattaaggtgggctaatttagcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10526882 - 10526938
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||| ||||||||||||| | | |||||| || |||||| ||||||||||||    
T  10526882 aggtctcagattcgattctctctggagtcaatttgggtgggttaatttagcttcttc 10526938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12587329 - 12587384
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||  ||| ||||||||| ||| || ||||||||||||    
T  12587329 aggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttcttc 12587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17745273 - 17745218
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||| |||||||||||||| ||| |||||||||  ||||| ||||||||||||    
T  17745273 aggtctcatgttcgattctctctggtgtcaatttagg-tggttaatttagcttcttc 17745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19940889 - 19940833
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| |||||||||  ||||||||||| | ||| | |||||||||||||    
T  19940889 aggtctcaggtttgattctctccggtgccaatttatgtgggctggtttagcttcttc 19940833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40814425 - 40814373
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    |||| |||||||||||||||||||||| ||||||| | ||| || ||||||||    
T  40814425 aggtttcaggttcgattctctctagtgtcaatttaagtgggctaatttagctt 40814373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 51814553 - 51814605
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    ||||||||||||||||||||||  |||||||||| || ||| || ||||||||    
T  51814553 aggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 7292813 - 7292759
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  7292813 gtctcaggttcgattctctctagtgccaatttgagggggttagtttagcttcttc 7292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23378015 - 23378071
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||    
T  23378015 aggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttc 23378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30938236 - 30938180
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| | | |||||||||||| |||||||||||||||||||    
T  30938236 aggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttc 30938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4249236 - 4249292
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| |||||||||| ||||||||||  | |||||||||||||||||||    
T  4249236 aggtctcaggtttgattctctctggtgccaatttgagggggttagtttagcttcttc 4249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7949471 - 7949415
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| || ||||||||||||    
T  7949471 aggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttcttc 7949415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15180797 - 15180853
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| |||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  15180797 aggtcttaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 15180853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37109368 - 37109312
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||  | |||||||||||| ||||||    
T  37109368 aggtctcaggttcgattctctctggtgccaatttgagggggttagtttagtttcttc 37109312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38869827 - 38869883
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||| |||| ||||||||||  | |||||||||||||||||||    
T  38869827 aggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttcttc 38869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 47386808 - 47386752
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||| ||||||||||||| ||||||||| ||| || ||||||||||||    
T  47386808 aggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttcttc 47386752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 52254421 - 52254365
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||||||    
T  52254421 aggtttcaggttagattctctccagtgccaatgtaggcgggctagtttagcttcttc 52254365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19680805 - 19680750
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||| |||||||||||||||| ||||||||||| |  |||||||||||||||||    
T  19680805 aggtcttaggttcgattctctctggtgccaatttaaggaggttagtttagcttctt 19680750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 2732055 - 2732109
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||  |||||||||| || ||| |||||||||||||||    
T  2732055 gtctcaggttcgattctctccggtgccaatttgggtgggctagtttagcttcttc 2732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 6666440 - 6666387
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| ||||| ||||  | |||||||||||||||||||    
T  6666440 tctcaggttcgattctctctggtgcccatttgagggggttagtttagcttcttc 6666387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 26356879 - 26356932
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||| ||||||||||| | |||||||||||||| ||| |||||||||||||||    
T  26356879 tctcatgttcgattctccccagtgccaatttaggtgggctagtttagcttcttc 26356932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7382056 - 7382112
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||| |||||| | |||||||||||||  | |||||||||||||||||    
T  7382056 aggtctcaggttcaattctccccagtgccaatttagttgagttagtttagcttcttc 7382112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16581752 - 16581808
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||| ||| ||||| ||||||||||  | |||||||||||||||||||    
T  16581752 aggtctcaggttctattatctctggtgccaatttgagagggttagtttagcttcttc 16581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28635755 - 28635811
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| |||||||||||||||| |||||||||| || ||| || ||||||||||||    
T  28635755 aggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttcttc 28635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39509129 - 39509181
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    |||||||||||||||||||| | |||| ||||||||| |||||| ||||||||    
T  39509129 aggtctcaggttcgattctccccagtggcaatttaggtgggttaatttagctt 39509181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49262701 - 49262645
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| | |||||||||||||| ||| || ||||| ||||||    
T  49262701 aggtctcaggttcgattctccccagtgccaatttaggtgggctaatttagtttcttc 49262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49938853 - 49938797
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| ||||| ||||||  |||||||||||||||| |||||| ||||||||||||    
T  49938853 aggtcttaggtttgattcttcctagtgccaatttaggtgggttaatttagcttcttc 49938797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 12793919 - 12793872
Alignment:
Q  10 gttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||| ||||||||||||| ||| || ||||||||||||    
T  12793919 gttcgattctctctggtgccaatttaggtgggctaatttagcttcttc 12793872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46295156 - 46295211
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||| |  |||||||||| || ||| ||||||||||||||    
T  46295156 aggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22096625 - 22096591
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattta 35  Q
    |||||||||||||||||||| ||||||||||||||    
T  22096625 aggtctcaggttcgattctccctagtgccaattta 22096591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 2185047 - 2184994
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||||||||   |||||||||  | ||||||||||||||||||    
T  2185047 gtctcaggttcgattctctccgatgccaatttgagggggttagtttagcttctt 2184994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 2622410 - 2622377
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttag 36  Q
    ||||||||||||||||||||| ||||||||||||    
T  2622410 gtctcaggttcgattctctctggtgccaatttag 2622377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9517787 - 9517754
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9517787 aggtctcaggttcgattctctctggtgccaattt 9517754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34844904 - 34844871
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  34844904 aggtctcaggttcgattctctctggtgccaattt 34844871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37980165 - 37980104
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttcggaag 62  Q
    |||||||||||||||||||| | |||| ||||||  ||||| |||||| ||||||| |||||    
T  37980165 aggtctcaggttcgattctccccagtgtcaatttcagcgggctagtttggcttctttggaag 37980104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40058998 - 40058965
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  40058998 aggtctcaggttcgattctctctggtgccaattt 40058965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 49287909 - 49287942
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  49287909 aggtctcaggttcgattctctctggtgccaattt 49287942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 50483071 - 50483120
Alignment:
Q  8 aggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||| ||| ||||||  | |||||||||||||||||||    
T  50483071 aggttcgattctctcttgtgacaatttcagggggttagtttagcttcttc 50483120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 5609347 - 5609315
Alignment:
Q  2 ggtctcaggttcgattctctctagtgccaattt 34  Q
    |||||||||||||||||||||| ||||||||||    
T  5609347 ggtctcaggttcgattctctctggtgccaattt 5609315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8030221 - 8030165
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||| ||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  8030221 aggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9693515 - 9693459
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||| |||||||| |||||| || ||| || |||| |||||||    
T  9693515 aggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaccttcttc 9693459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 12448770 - 12448802
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttag 36  Q
    |||||||||||||||||| ||||||||||||||    
T  12448770 tctcaggttcgattctctttagtgccaatttag 12448802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29195153 - 29195209
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||| || ||||||||||||||| ||||||||| ||  || |||||||||||||||    
T  29195153 aggtcgcaagttcgattctctctaatgccaattttggttggctagtttagcttcttc 29195209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37274476 - 37274420
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| |||||||||||||||| |||| |||||| | ||| || ||||||||||||    
T  37274476 aggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagcttcttc 37274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 43623459 - 43623411
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagc 51  Q
    ||||||||||||||||||| ||||  ||||||||| ||| |||||||||    
T  43623459 gtctcaggttcgattctctatagtagcaatttaggtgggctagtttagc 43623411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6536579 - 6536635
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||    
T  6536579 aggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16852399 - 16852455
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||  ||||||||||||||| ||| || ||||||||||||    
T  16852399 aggtctcaggttcgattctccttagtgccaatttaggtgggctattttagcttcttc 16852455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18540357 - 18540413
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||  | |||||| ||||||||||||    
T  18540357 aggtctcaggttcgattctctctggtgccaatttgagagggttaatttagcttcttc 18540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28787513 - 28787456
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttcg 58  Q
    |||||||||||| ||||||| | |||||||||||||| |||  |||||||||||||||    
T  28787513 aggtctcaggtttgattctccccagtgccaatttaggtgggaaagtttagcttcttcg 28787456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11819835 - 11819891
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  11819835 aggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagcttcttc 11819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33017273 - 33017328
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| |||||||||| |  ||||||||||| |||||||    
T  33017273 aggtctcaggttcgattctctctggtgccaattt-gaggggttagtttaacttcttc 33017328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 968421 - 968476
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||||||||||   |||||||||||| ||| || |||||||||||    
T  968421 aggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 8794361 - 8794307
Alignment:
Q  2 ggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||||| || |||||||| | |||||| ||||||||||||    
T  8794361 ggtctcaggttcgattctctctggtaccaatttaag-gggttaatttagcttcttc 8794307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 28560669 - 28560720
Alignment:
Q  5 ctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||| ||||||||||||||||||| |||||||| |||||| ||||| |||||    
T  28560669 ctcatgttcgattctctctagtgctaatttaggtgggttaatttagtttctt 28560720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31408139 - 31408084
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||| ||||||||||||||||||| || ||||||| | |||||| |||||||||||    
T  31408139 aggtttcaggttcgattctctctaatgtcaatttaagggggttaatttagcttctt 31408084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 16317671 - 16317725
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| |||||||||||||| ||||||||||  | ||| |||||||||||||||    
T  16317671 gtctcatgttcgattctctctggtgccaatttcagtgggctagtttagcttcttc 16317725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 35851863 - 35851916
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||| |||||||| ||||| |||| ||||| ||| |||||||||||||||||    
T  35851863 gtctcatgttcgattatctctggtgctaatttgggcaggttagtttagcttctt 35851916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42740553 - 42740606
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 54  Q
    ||||||||||||| ||||||||| ||| ||||||| | | ||||||||||||||    
T  42740553 aggtctcaggttcaattctctctggtgtcaatttaagggagttagtttagcttc 42740606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43594335 - 43594302
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  43594335 aggtctcaggttcgattctctctagtgtcaattt 43594302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7347896 - 7347952
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| |||||||| ||||||||| ||| ||||||||| ||| || ||||||||||||    
T  7347896 aggtttcaggttcaattctctcttgtgtcaatttaggtgggctaatttagcttcttc 7347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8485058 - 8485114
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||  ||||||||||||  ||||||||||||| ||| || ||||||||||||    
T  8485058 aggtctcattttcgattctctccggtgccaatttaggtgggctaatttagcttcttc 8485114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12988487 - 12988542
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| ||||||||||| |||||| |||||||||| |  |||||||||||||||||||    
T  12988487 aggtttcaggttcgatcctctctggtgccaattt-gaggggttagtttagcttcttc 12988542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29915937 - 29915881
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||  ||||||| ||||||||||||||||| |  | ||||||||||||||||    
T  29915937 aggtctcatattcgattttctctagtgccaatttaaggtgtttagtttagcttcttc 29915881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44780131 - 44780075
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| ||||| |||||||| |||||| || ||| || ||||||||||||    
T  44780131 aggtctcaggtttgattccctctagtgtcaatttgggtgggctaatttagcttcttc 44780075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11306191 - 11306135
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  11306191 aggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 11306135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12188320 - 12188264
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| ||| |||||||||||||||||||||||||  | |||||||||||||||||||    
T  12188320 aggtttcaagttcgattctctctagtgccaatttgagggggttagtttagcttcttc 12188264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24256839 - 24256783
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||| |||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  24256839 aggtctcaagttcgattctctctggtgtcaatttaggtaggttagtttagcttcttc 24256783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9583424 - 9583479
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||  |||||||||||||| |||||||||| || ||||||||||||||||||    
T  9583424 aggtctccagttcgattctctctggtgccaatttcggtgggttagtttagcttctt 9583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13330146 - 13330201
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||| ||||||||||||| ||||||||||  | ||||||||||||||||||    
T  13330146 aggtctcagattcgattctctcttgtgccaatttgagagggttagtttagcttctt 13330201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18263899 - 18263955
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||| |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  18263899 aggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagcttcttc 18263955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 1056693 - 1056646
Alignment:
Q  10 gttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||| ||||||| ||||| |||||| ||||||||||||    
T  1056693 gttcgattctctctggtgccaagttaggtgggttaatttagcttcttc 1056646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12234524 - 12234469
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||||| |||| ||||||||  ||| || |||||||||||    
T  12234524 aggtctcaggttcgattctctccagtgtcaatttagatgggataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 20213102 - 20213156
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  20213102 gtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 20213156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 21418531 - 21418585
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||| ||||||||||| |||||||||||| ||| ||| || ||||||||||||    
T  21418531 gtctcaagttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 21418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 22107125 - 22107179
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  22107125 gtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 22107179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 32250866 - 32250812
Alignment:
Q  2 ggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||||  ||| ||||||| | |||||| |||||||||||    
T  32250866 ggtctcaggttcgattctctccggtgacaatttaagtgggttaatttagcttctt 32250812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11448922 - 11448955
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  11448922 aggtctcaggttcgattctctctggtgccaattt 11448955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30127459 - 30127512
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 54  Q
    ||||||||||||||||||| ||  |||||||||||||  ||||| |||||||||    
T  30127459 aggtctcaggttcgattctttccggtgccaatttaggtaggttaatttagcttc 30127512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8597764 - 8597708
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||| |||| |||||||| ||||||||||| || ||| || ||||||||||||    
T  8597764 aggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagcttcttc 8597708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2750643 - 2750587
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||| |||||||||||||||||||||||||  | |||||||||||||||||||    
T  2750643 aggtctcatgttcgattctctctagtgccaatttgagggggttagtttagcttcttc 2750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42922474 - 42922529
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||||||||||| ||||||||||    ||||||||||||||||||    
T  42922474 aggtctcaggttcgattctctctggtgccaatttgatggggttagtttagcttctt 42922529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 4060228 - 4060175
Alignment:
Q  4 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| ||| ||||||  | |||||||||||||||||||    
T  4060228 tctcaggttcgattctctctggtgtcaatttgagggggttagtttagcttcttc 4060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 6859327 - 6859274
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||||||||||||||||| || ||| ||||| | ||||||||||||||||    
T  6859327 gtctcaggttcgattctctctaatgtcaacttaggtgagttagtttagcttctt 6859274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21213828 - 21213884
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| |  ||||||||||||| ||| |||||| ||||||||    
T  21213828 aggtctcaggttcgattctccccggtgccaatttaggtgggctagttttgcttcttc 21213884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33582032 - 33582088
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||||||| || ||||||||| ||  || ||||||||||||    
T  33582032 aggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagcttcttc 33582088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34041605 - 34041549
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||| ||||| |||| ||||||||||  | |||||||||||||||||||    
T  34041605 aggtctcaggtttgattccctctggtgccaatttgagggggttagtttagcttcttc 34041549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 37971956 - 37972008
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttct 55  Q
    ||||||||||||||||||||  ||||||||||||| ||| || ||||||||||    
T  37971956 gtctcaggttcgattctctccggtgccaatttaggtgggctaatttagcttct 37972008  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14500336 - 14500391
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||| ||||||||||||| ||||||||||  | ||| ||||||||||||||    
T  14500336 aggtctcagattcgattctctctggtgccaatttgagggggatagtttagcttctt 14500391  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40416407 - 40416352
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||||||||||||| ||||||||||    |||||||||||| |||||    
T  40416407 aggtctcaggttcgattctctctggtgccaatttgaaggggttagtttagattctt 40416352  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45026802 - 45026856
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttct 55  Q
    |||||||| ||| |||||||||| ||||||||||  | |||||||||||||||||    
T  45026802 aggtctcatgtttgattctctctggtgccaatttgagggggttagtttagcttct 45026856  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19244168 - 19244201
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  19244168 aggtctcaggttcgattctctctggtgccaattt 19244201  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19322827 - 19322883
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||| |||| |||||||||||||||||||||  |  |||||||||| |||||||    
T  19322827 aggtctctggtttgattctctctagtgccaatttgaggaggttagtttaacttcttc 19322883  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21304011 - 21303955
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| |||||||||||||||||| ||| ||||||  | |||||| ||||||||||||    
T  21304011 aggtttcaggttcgattctctctggtgtcaatttgagggggttaatttagcttcttc 21303955  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23052540 - 23052484
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||||||||||||||||||| ||||||||| ||| || ||| || ||||| ||||||    
T  23052540 aggtctcaggttcgattctccctagtgccagtttgggtgggctaatttagtttcttc 23052484  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30410562 - 30410510
Alignment:
Q  5 ctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    |||| |||||||| ||||| ||||||||||  | |||||||||||||||||||    
T  30410562 ctcatgttcgattttctctggtgccaatttgagggggttagtttagcttcttc 30410510  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39764992 - 39765044
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 53  Q
    |||||||||||||||||| |||||||| ||||||||  ||| || ||||||||    
T  39764992 aggtctcaggttcgattccctctagtgtcaatttagctgggctaatttagctt 39765044  T

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Target: scaffold0074 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45776 - 45721
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    |||||||| |||||||||||||| ||| ||||||||| ||||||||||| ||||||    
T  45776 aggtctcatgttcgattctctctggtgtcaatttaggtgggttagtttaacttctt 45721  T

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Target: scaffold0258 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15340 - 15284
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||||||   |||||||||||| ||| || ||||||||||||    
T  15340 aggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagcttcttc 15284  T

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Target: scaffold0070 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 42535 - 42482
Alignment:
Q  3 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 57  Q
    ||||||||||||||||||| | ||||||||||| | |||||| ||||||||||||    
T  42535 gtctcaggttcgattctctttggtgccaatttaag-gggttaatttagcttcttc 42482  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2728 - 2695
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaattt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  2728 aggtctcaggttcgattctctctggtgccaattt 2695  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 94988 - 94935
Alignment:
Q  1 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 56  Q
    ||||||||||||| ||| ||||| |||||||||||   ||||||||||||||||||    
T  94988 aggtctcaggttcaattatctctggtgccaattta--agggttagtttagcttctt 94935  T

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