View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15412_low_3 (Length: 234)
Name: NF15412_low_3
Description: NF15412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15412_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 33835164 - 33834967
Alignment:
| Q |
18 |
taatacttttgtttttcgttacgatatgattagcctcactcttcttgatgtaattgtcattcttgaactttctttaattggagaagaagcctcatctgcc |
117 |
Q |
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| T |
33835164 |
taatacttttgtttttcgttacgatatgattagcctcactcttcttgatgtaattgtcattcttgaactttctttaattggagaagaagcctcatctgcc |
33835065 |
T |
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| Q |
118 |
tatatttttccccaatccccaattcgaggattgctttttcaaagaacacctttaggtattccaaatttttggcttccatgttgaagtcgtccatgtcatt |
217 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33835064 |
tata--tttccccaatccccaattcgaggattgctttttcaaagaacacctttaggtattccaaatttttggcttccatgttgaagtcgtccatgtcatt |
33834967 |
T |
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