View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15413_high_5 (Length: 351)

Name: NF15413_high_5
Description: NF15413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15413_high_5
NF15413_high_5
[»] chr7 (1 HSPs)
chr7 (34-324)||(48965695-48965984)


Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 34 - 324
Target Start/End: Original strand, 48965695 - 48965984
Alignment:
34 aacacaccacacatgtgatctgacctttctacattttctgattcactacatatgatgtttgcatcattgttttgttggcttttgcatttgatcattcaac 133  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||| |||||||||||    
48965695 aacaaaccacacatgtgatctgacctttctacattttctgattaactacatatgatgtttgctacattgttttgttggcttt-gcattggatcattcaac 48965793  T
134 attgcatctgtttactaaaacaaaaatcacaaacactgataatgaatgttaattagtctaatttaagaaccagcaatagcagcaatgcctggtgctcttt 233  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
48965794 attgcatctgtttactaaaaagaaaatcacaaacactaataatgaatgttaattagtataatttaagaaccagcaatagcagcaatgcctggtgctcttt 48965893  T
234 cgtaagagcaacaaactgtgatgtgaggccaaatggttataattggcttctatggagctcttcttttctaaaatcatatagcaacctgatg 324  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
48965894 cttaagagcaacaaactgtgatgtgaggccaaatggttataattggcttccatggagctcttcttttctaaaatcatatagcaacctgatg 48965984  T

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