View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15414_high_13 (Length: 425)
Name: NF15414_high_13
Description: NF15414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15414_high_13 |
 | |
|
| [»] chr1 (7 HSPs) |
| |
|
| [»] chr8 (2 HSPs) |
| |
|
| [»] scaffold0012 (1 HSPs) |
| | |
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Alignment Details
Target: chr1 (Bit Score: 305; Significance: 1e-171; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 113 - 425
Target Start/End: Complemental strand, 6839136 - 6838824
Alignment:
| Q |
113 |
cctgcttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggagatatgggattatctcaagaaagaatatgaagg |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6839136 |
cctgcttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggagatatgggattatctcaagaaagaatatgaagg |
6839037 |
T |
|
| Q |
213 |
tgatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaa |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6839036 |
tgatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattcgaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaa |
6838937 |
T |
|
| Q |
313 |
cttctcaatattgcaaacagtgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaag |
412 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6838936 |
cttctcaatattgcaaacagtgtgagacttttgggatcaaaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaag |
6838837 |
T |
|
| Q |
413 |
caaccatcactac |
425 |
Q |
| |
|
||||||||||||| |
|
|
| T |
6838836 |
caaccatcactac |
6838824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 113 - 425
Target Start/End: Complemental strand, 2797941 - 2797629
Alignment:
| Q |
113 |
cctgcttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggagatatgggattatctcaagaaagaatatgaagg |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
2797941 |
cctgcttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcatcaaaggatatatgggattatctcaagaaagaatatgaagg |
2797842 |
T |
|
| Q |
213 |
tgatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaa |
312 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2797841 |
tgatgaaagaattaaaggcatgcaagtcctgaacctgattcgggaattcgaacttcaaagaatgaaggattccgagacgattcaagattactctgacaaa |
2797742 |
T |
|
| Q |
313 |
cttctcaatattgcaaacagtgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaag |
412 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2797741 |
cttctcaatattgcaaacaatgtgagacttttgggatcataattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaag |
2797642 |
T |
|
| Q |
413 |
caaccatcactac |
425 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2797641 |
caaccatcactac |
2797629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 113 - 425
Target Start/End: Complemental strand, 8977912 - 8977601
Alignment:
| Q |
113 |
cctgcttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggagatatgggattatctcaagaaagaatatgaagg |
212 |
Q |
| |
|
|||||||||||| || ||||||||| |||||||||||||| |||||| |||||| || |||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8977912 |
cctgcttgtttgttgttgtctcaacaactattttcacaagcatcatg-ccttgagataagcaaaagagatatgggattatctcaagaaagaacatgaagg |
8977814 |
T |
|
| Q |
213 |
tgatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaa |
312 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| |||| |||||| |||||||||||||||||||||||||||| ||| || ||||||| |||||| |
|
|
| T |
8977813 |
tgatgaaagaattaaaggcatgcaagtcctaaacttgatataggaattgaaacttcaaagaatgaaggattctgagactatttaaaattactccgacaaa |
8977714 |
T |
|
| Q |
313 |
cttctcaatattgcaaacagtgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaag |
412 |
Q |
| |
|
|||||||||||| || ||| ||||||||| |||||| |||||| |||||||||||||| ||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
8977713 |
cttctcaatatttcacacaaagtgagacttctgggattggaattcgctgactcaagaattcttggaaaaactcttgtaatggtacccgaaagatatgaag |
8977614 |
T |
|
| Q |
413 |
caaccatcactac |
425 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8977613 |
taaccatcactac |
8977601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 117 - 425
Target Start/End: Original strand, 6384548 - 6384855
Alignment:
| Q |
117 |
cttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggagatatgggattatctcaagaaagaatatgaaggtgat |
216 |
Q |
| |
|
|||||||| || || ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| |
|
|
| T |
6384548 |
cttgtttgatgttgactcaaccactattttcacaagaatcgtgtccttgaaatcagcaaaggagttatgagattatctcaagaaagaatatgaaaaagat |
6384647 |
T |
|
| Q |
217 |
gaaagaattaaaggcatgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaacttc |
316 |
Q |
| |
|
|||||||||||||||||| |||| || ||| |||| || |||||| || |||||||||||||||||| ||| | ||||||| ||||||||||||||| || |
|
|
| T |
6384648 |
gaaagaattaaaggcatgtaagtcctcaacttgatccgagaattcaaagttcaaagaatgaaggattttgaaatgattcaaaattactctgacaaacatc |
6384747 |
T |
|
| Q |
317 |
tcaatattgcaaacagtgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaagcaac |
416 |
Q |
| |
|
||||||| ||||||| ||| |||| | | |||| ||| || |||| || |||||||||||||||||||||||||| |||| ||||||| | |||| ||| |
|
|
| T |
6384748 |
tcaatatcgcaaacaatgtaagacatctaggataagactttactgagtctagaattgttgaaaaaattcttgtaacagtacacgaaaga-aggaagtaac |
6384846 |
T |
|
| Q |
417 |
catcactac |
425 |
Q |
| |
|
||||||||| |
|
|
| T |
6384847 |
catcactac |
6384855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 189 - 417
Target Start/End: Complemental strand, 28600907 - 28600679
Alignment:
| Q |
189 |
ttatctcaagaaagaatatgaaggtgatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgag |
288 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||||| | ||| |
|
|
| T |
28600907 |
ttatcttaagaaagaatatgaagaacatgaaagaattaaaggcatgcaagtcttgaacttgatatgggaatttagacttcaaagaatgaaggaattcgag |
28600808 |
T |
|
| Q |
289 |
acgattcaagattactctgacaaacttctcaatattgcaaacagtgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttg |
388 |
Q |
| |
|
|||||| ||||||||||||||| ||| ||||||||||||||| | | ||||||||||||| |||||| |||| |||||||||||||||||| ||||| |
|
|
| T |
28600807 |
acgattagagattactctgacaagcttttcaatattgcaaacaatctaagacttttgggattggaattcaatgacacaagaattgttgaaaaaaatcttg |
28600708 |
T |
|
| Q |
389 |
taactgtacccgaaagatatgaagcaacc |
417 |
Q |
| |
|
|||| |||||| ||||||||||| ||||| |
|
|
| T |
28600707 |
taacggtacccaaaagatatgaaacaacc |
28600679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 2798039 - 2797991
Alignment:
| Q |
15 |
ggaagaagattatgaaattcctgtacttccaaacaatcccaccatggca |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2798039 |
ggaagaagattatgaaattcctgtacttccaaacaatcccaccatggca |
2797991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 6839230 - 6839186
Alignment:
| Q |
19 |
gaagattatgaaattcctgtacttccaaacaatcccaccatggca |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6839230 |
gaagattatgaaattcctgtacttccaaacaatcccaccatggca |
6839186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 113 - 425
Target Start/End: Original strand, 32525443 - 32525755
Alignment:
| Q |
113 |
cctgcttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggagatatgggattatctcaagaaagaatatgaagg |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
32525443 |
cctgcttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggaaatatgggattatctcaagaaagaatatgaagg |
32525542 |
T |
|
| Q |
213 |
tgatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaa |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32525543 |
tgatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattcgaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaa |
32525642 |
T |
|
| Q |
313 |
cttctcaatattgcaaacagtgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaag |
412 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32525643 |
cttctcaatattgcaaacagtgtgagacttttgggatcaaaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaag |
32525742 |
T |
|
| Q |
413 |
caaccatcactac |
425 |
Q |
| |
|
||||||||||||| |
|
|
| T |
32525743 |
caaccatcactac |
32525755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 32525349 - 32525393
Alignment:
| Q |
19 |
gaagattatgaaattcctgtacttccaaacaatcccaccatggca |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32525349 |
gaagattatgaaattcctgtacttccaaacaatcccaccatggca |
32525393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 133 - 417
Target Start/End: Complemental strand, 8926792 - 8926509
Alignment:
| Q |
133 |
tcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggagatatgggattatctcaagaaagaatatgaaggtgatgaaagaattaaaggca |
232 |
Q |
| |
|
||||||| |||||| ||| |||| ||||||||||||||||| |||||||||| |||||| |||||||||||||||||| |||||||||||||||| || |
|
|
| T |
8926792 |
tcaaccattattttaacatgaattgtgtccttgaaatcagcagaggagatatgagattatttcaagaaagaatatgaagctgatgaaagaattaaataca |
8926693 |
T |
|
| Q |
233 |
tgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaacttctcaatattgcaaacag |
332 |
Q |
| |
|
|||||| ||||| |||| |||||||| ||||||||||||||| ||||| |||| ||||||| |||||| ||| || ||||||||||||||||||| |
|
|
| T |
8926692 |
tgcaagccttgaacttgata-gggaattcgaacttcaaagaatgagggatttcgagatgattcaaaattactttgaaaagcttctcaatattgcaaacaa |
8926594 |
T |
|
| Q |
333 |
tgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaagcaacc |
417 |
Q |
| |
|
|||||| ||||| |||| ||||| |||||||||||||||||||||| |||| |||| ||||||| ||| |||||||||||| |
|
|
| T |
8926593 |
ggtgagatttttgagatcgtaattcgctgactcaagaattgttgaaaatgttctggtaatggtacccggaagttatgaagcaacc |
8926509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 116; Significance: 7e-59; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 115 - 413
Target Start/End: Original strand, 2802475 - 2802771
Alignment:
| Q |
115 |
tgcttgtttgctgctgtctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggag-atatgggattatctcaagaaagaatatgaaggt |
213 |
Q |
| |
|
||||| |||| || |||||||| |||||||||||||||||| |||||||| |||||| |||| | |||||||||||||| || ||| ||| |||| | |
|
|
| T |
2802475 |
tgcttatttgatgttgtctcaatcactattttcacaagaataatgtcctttaaatcaccaaaaaaatatatgggattatctaaa-aaataatttgaaaga |
2802573 |
T |
|
| Q |
214 |
gatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgagacgattcaagattactctgacaaac |
313 |
Q |
| |
|
|| |||| |||||||||||||||||| || || ||| ||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | |
|
|
| T |
2802574 |
gaagaaataattaaaggcatgcaagtcttggacttgactcgggaatttgaacttcaaagaatgaaggattccaa-acgattcaagattactctgacaagc |
2802672 |
T |
|
| Q |
314 |
ttctcaatattgcaaacagtgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaagc |
413 |
Q |
| |
|
||||||||||||||| || ||||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||| |||| ||||| |||| |||| |
|
|
| T |
2802673 |
ttctcaatattgcaa-caacatgagacttttgggttcagaattcactgacttaagaattgttgaaaaatttcttgtaacggtactcgaaaaatattaagc |
2802771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 2765338 - 2765370
Alignment:
| Q |
132 |
ctcaaccactattttcacaagaatcatgtcctt |
164 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
2765338 |
ctcaaccactattttcacaagaataatgtcctt |
2765370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 196 - 418
Target Start/End: Original strand, 13812018 - 13812240
Alignment:
| Q |
196 |
aagaaagaatatgaaggtgatgaaagaattaaaggcatgcaagttctgaacctgattcgggaattccaacttcaaagaatgaaggattctgagacgattc |
295 |
Q |
| |
|
||||||||| |||||| || ||||||||| |||| |||||||| || ||| || |||||||| |||||||||||||||||||||||| ||| |||| |
|
|
| T |
13812018 |
aagaaagaacatgaagtagaagaaagaattcaaggtatgcaagtccttaactcgaagagggaattcgaacttcaaagaatgaaggattctgggacaattc |
13812117 |
T |
|
| Q |
296 |
aagattactctgacaaacttctcaatattgcaaacagtgtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgt |
395 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||| ||| |||||||| |||||||||||| || ||||||||||||||||||| |||||||||| || |
|
|
| T |
13812118 |
aagattactctagcaagcttctcaatattgcaaacaatgttagacttttaggatcagaattcgctaactcaagaattgttgaaaagattcttgtaatggt |
13812217 |
T |
|
| Q |
396 |
acccgaaagatatgaagcaacca |
418 |
Q |
| |
|
|| | ||||||||||||||||| |
|
|
| T |
13812218 |
actcagaagatatgaagcaacca |
13812240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 9306888 - 9306943
Alignment:
| Q |
359 |
ctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaagca |
414 |
Q |
| |
|
|||||||||||||||| ||||||||||| || || |||| ||||||||||||||| |
|
|
| T |
9306888 |
ctgactcaagaattgtagaaaaaattctcgtgacattacctgaaagatatgaagca |
9306943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 20101347 - 20101274
Alignment:
| Q |
132 |
ctcaaccactattttcacaagaatcatgtccttgaaatcagcaaaggagatatgggattatctcaagaaagaat |
205 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| |||||| |||||||||||| |
|
|
| T |
20101347 |
ctcaaccactattttaacaagaatcgtgtccttgaaatcagcagaggagatatgagattatttcaagaaagaat |
20101274 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 20101180 - 20101099
Alignment:
| Q |
334 |
gtgagacttttgggatcagaattctctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaagcaa |
415 |
Q |
| |
|
|||||||||||| |||| ||||| |||||||||||||||||||||| |||| ||||| |||||| |||| |||||||||| |
|
|
| T |
20101180 |
gtgagacttttgagatcgtaattcgttgactcaagaattgttgaaaaagttctggtaacggtacccaaaagttatgaagcaa |
20101099 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 20101455 - 20101415
Alignment:
| Q |
23 |
attatgaaattcctgtacttccaaacaatcccaccatggca |
63 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||||||||| |
|
|
| T |
20101455 |
attatgaaattcatgtacttacgaacaatcccaccatggca |
20101415 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 31081665 - 31081720
Alignment:
| Q |
359 |
ctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaagca |
414 |
Q |
| |
|
|||||||||||||||| ||||||||||| || || |||| ||||||||||||||| |
|
|
| T |
31081665 |
ctgactcaagaattgtagaaaaaattctcgtgacattacctgaaagatatgaagca |
31081720 |
T |
|
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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 153994 - 153938
Alignment:
| Q |
358 |
tctgactcaagaattgttgaaaaaattcttgtaactgtacccgaaagatatgaagca |
414 |
Q |
| |
|
||||||||||||||||| ||||||||||| || | |||| ||||||||||||||| |
|
|
| T |
153994 |
tctgactcaagaattgtagaaaaaattctcgtgtcattacctgaaagatatgaagca |
153938 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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