View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15414_high_16 (Length: 352)
Name: NF15414_high_16
Description: NF15414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15414_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 17 - 337
Target Start/End: Original strand, 38117545 - 38117865
Alignment:
| Q |
17 |
aagaaactaacataagactcttccacttgaaaaatcaaggtagttgaactcctttattatatattcaaatctaccacttctcttctccaaaataatattg |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38117545 |
aagaaactaacataagactcttccacttgaaaaatcaaggtagttgaactcctttattatatattcaaatctaccacttctcttctccaaaataatattg |
38117644 |
T |
|
| Q |
117 |
aaccattgcactataataatcatcccttaccttaatttaatcaaaacataaacctagtactcatggaaccactcaattgttttcaaatgacattaatact |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
38117645 |
aaccattgcactataataatcatcccttaccttaatttaatcaaaacataaacctagtactcatgaaaccactcaattgttttcaaatgacattaatact |
38117744 |
T |
|
| Q |
217 |
tgcagcccttataatctcctcaataaatttagttaatggtcaaattacttcatcatgcacatcctctatgattagcagcacattcactccatgtgctaac |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38117745 |
agcagcccttataatctcctcaataaatttagttaatggtcaaattacttcatcatgcacatcctctatgattagcagcacattcactccatgtgctaac |
38117844 |
T |
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| Q |
317 |
atcataacaggaagcactaat |
337 |
Q |
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||||||||||||||||||||| |
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| T |
38117845 |
atcataacaggaagcactaat |
38117865 |
T |
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