View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15414_low_21 (Length: 351)
Name: NF15414_low_21
Description: NF15414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15414_low_21 |
 | |
|
| [»] chr4 (1 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 18 - 351
Target Start/End: Original strand, 18925740 - 18926073
Alignment:
| Q |
18 |
tgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttata |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18925740 |
tgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttata |
18925839 |
T |
|
| Q |
118 |
gatgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgag |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18925840 |
gatgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatggttcctgttcataaggattatgttgtgactatgtactctcgag |
18925939 |
T |
|
| Q |
218 |
aaggaagctctaaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatgggat |
317 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18925940 |
aaggaagctcgcaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataccgtaatgtcacattgaatgggat |
18926039 |
T |
|
| Q |
318 |
cgagattttgaaaataagtgacaaaaataacaat |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
18926040 |
cgagattttgaaaataagtgacaaaaataacaat |
18926073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 136; Significance: 7e-71; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 347
Target Start/End: Original strand, 4712075 - 4712402
Alignment:
| Q |
20 |
aagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttataga |
119 |
Q |
| |
|
||||||||||| ||||||||| ||||||| || |||||||| ||||||||| || ||| |||||| |||||||||||||||||||||| ||||| | |
|
|
| T |
4712075 |
aagttgattctagttttacttatatggtaaggttacatttttgtgagtttgatctgcttatcaagaataaaggtgatagagtttttcagatatttatcaa |
4712174 |
T |
|
| Q |
120 |
tgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgagaa |
219 |
Q |
| |
|
||||| ||||||||||| | | |||||||||||| | |||||||||| | ||||||||||||||||||||||||| ||||| |||||||||| | | |
|
|
| T |
4712175 |
tgatattttggctgaacaatacgctgatgtgatttactggagtggtggtaacatgattcctgttcataaggattatgctgtgaaaatgtactctcaaaat |
4712274 |
T |
|
| Q |
220 |
ggaagctctaaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatgggatcg |
319 |
Q |
| |
|
||||||||| ||||| |||||||||| |||||||| ||||| ||||||| |||||||| ||||||| |||| || ||| |||||| | ||||||| || | |
|
|
| T |
4712275 |
ggaagctctgaaattgaaagagttaacctttcaattaagcttcaacgagaaccagaaagtatctacacaaattaccgtgatgtcataatgaatggaattg |
4712374 |
T |
|
| Q |
320 |
agattttgaaaataagtgacaaaaataa |
347 |
Q |
| |
|
||||||| ||||||||||| |||||||| |
|
|
| T |
4712375 |
agattttcaaaataagtgataaaaataa |
4712402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 351
Target Start/End: Complemental strand, 4667033 - 4666699
Alignment:
| Q |
20 |
aagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttataga |
119 |
Q |
| |
|
||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4667033 |
aagttgattctatttttacttatatggtaaggttgcatttttgtgagtttgattggcatatcaagaatccaggtgatagagtttttcagatttttataga |
4666934 |
T |
|
| Q |
120 |
tgataatttggctgaacgaaatgctgatgtgattcattgg---agtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcga |
216 |
Q |
| |
|
||||| | ||||||||| || ||||| ||| || ||||| ||||||| ||||||| ||||||||||||||||||||| |||||||| | |||| | |
|
|
| T |
4666933 |
tgatattatggctgaaccaagggctgacgtgctttattggagtagtggtgttcgtatggttcctgttcataaggattatgccttgactatggattctcaa |
4666834 |
T |
|
| Q |
217 |
gaaggaagctctaaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatggga |
316 |
Q |
| |
|
| ||| ||| | ||||| ||||||||||||||||||| ||||| ||||||| |||||||| | ||| ||||||| || ||||| | ||||| | |
|
|
| T |
4666833 |
ggagggagccgtcaaattgaaagagttaatctttcaattaagcttcaacgagtaccagaaactgtctttacaaaatacagtgatgtccttcttaatggaa |
4666734 |
T |
|
| Q |
317 |
tcgagattttgaaaataagtgacaaaaataacaat |
351 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |
|
|
| T |
4666733 |
tcgagattttaaaaataagtgacaaaaataacaat |
4666699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 34 - 345
Target Start/End: Original strand, 4697204 - 4697515
Alignment:
| Q |
34 |
tttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttatagatgataatttggctg |
133 |
Q |
| |
|
||||||||| ||||||| ||||||||||| ||||||||| |||||| || ||| |||||||||||| ||||| || || |||| | ||| |||||| | |
|
|
| T |
4697204 |
tttacttatatggtaaggttgcatttttgtgagtttgatcagcatatcaaaaatataggtgatagagtctttcaaatattcatagctaatactttggcgg |
4697303 |
T |
|
| Q |
134 |
aacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgagaaggaagctctaaaat |
233 |
Q |
| |
|
| ||| |||||||||||| ||||||| | ||| |||| ||||||||||||| ||||||| |||| ||||| |||||| ||||||||||||| |||| |
|
|
| T |
4697304 |
agataaacgctgatgtgatttcttggagtactactcctatggttcctgttcataaagattatgctgtgtctatgcactctcaagaaggaagctctcaaat |
4697403 |
T |
|
| Q |
234 |
taaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatgggatcgagattttgaaaata |
333 |
Q |
| |
|
| ||||| ||||||||||||| ||||||||||||||||||| | ||||| | ||| ||| || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
4697404 |
tgaaagacttaatctttcaatcaagctacaacgagcaccaggacgtatcttcacaagatacggtgatgtcacattgaatggcatcgagattttgaaaata |
4697503 |
T |
|
| Q |
334 |
agtgacaaaaat |
345 |
Q |
| |
|
| ||| |||||| |
|
|
| T |
4697504 |
aatgataaaaat |
4697515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 4846014 - 4846262
Alignment:
| Q |
19 |
gaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttatag |
118 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| || |||||||| ||||||||| || || |||||| |||||||||||||||||||||| ||||| |
|
|
| T |
4846014 |
gaagttgattctagttttacttatatggtaaggttacatttttgtgagtttgatctgcttaccaagaataaaggtgatagagtttttcagatatttatca |
4846113 |
T |
|
| Q |
119 |
atgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgaga |
218 |
Q |
| |
|
|||||| ||||||||||| | |||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||| || ||||||| | | |
|
|
| T |
4846114 |
atgatattttggctgaactatatgctgatgtgattttttggagtggtggtaacatgattcctgttcataaggattatgctgtgaaaatctactctcaaaa |
4846213 |
T |
|
| Q |
219 |
aggaagctctaaaattaaaagagttaatctttcaataaagctacaacga |
267 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||| ||||| |||||| |
|
|
| T |
4846214 |
tggaagctctgaaattgaaagagttaatctttcaatcaagcttcaacga |
4846262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 343
Target Start/End: Complemental strand, 4631024 - 4630699
Alignment:
| Q |
18 |
tgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttata |
117 |
Q |
| |
|
||||||||||||| | ||||||||| |||||||||| |||||||| |||||||| | |||| |||||||||||||||| ||||||||||| ||| |
|
|
| T |
4631024 |
tgaagttgattcttcttttacttatatggtaagattacatttttgtgagtttgaaatgacgataagagatcaaggtgatagagtctttcagattttcata |
4630925 |
T |
|
| Q |
118 |
gatgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgag |
217 |
Q |
| |
|
| | | | | | ||||| ||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| || |
|
|
| T |
4630924 |
gctaacattctagctgaggaaaaagctgatgtgataaggtggagtggtgctcgtatggttcctactcataaggattatgttgtgcttatgtactctcaag |
4630825 |
T |
|
| Q |
218 |
aaggaagctctaaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatgggat |
317 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||| ||||| | |||||||||||||| ||| || ||| ||| ||| ||||| ||||||| || |
|
|
| T |
4630824 |
aaggaagctctcaaattgaaagagttaatctttcaatcaagcttcgacgagcaccagaaactatacacacaatatatcgtgatgtcctgctgaatggaat |
4630725 |
T |
|
| Q |
318 |
cgagattttgaaaataagtgacaaaa |
343 |
Q |
| |
|
|||||||| ||||||||||| |||| |
|
|
| T |
4630724 |
tgagattttcaaaataagtgataaaa |
4630699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 263
Target Start/End: Complemental strand, 4653601 - 4653372
Alignment:
| Q |
34 |
tttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttatagatgataatttggctg |
133 |
Q |
| |
|
||||||||| |||| || || |||||||| || |||||||||| ||| ||| || |||||||||||||||| ||||| |||||| ||||| ||||||| |
|
|
| T |
4653601 |
tttacttatatggtcaggttacatttttgtgaatttgattggcgtatcaaggataaaggtgatagagttttccagatatttatacatgatttcttggctg |
4653502 |
T |
|
| Q |
134 |
aacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgagaaggaagctctaaaat |
233 |
Q |
| |
|
||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| || |||| |
|
|
| T |
4653501 |
aaccaaatgctgatgtgatttcatggagcaatgctcgtttgattcctgttcataaggattatgttgtgactatgcactctgaagaaggaagcactcaaat |
4653402 |
T |
|
| Q |
234 |
taaaagagttaatctttcaataaagctaca |
263 |
Q |
| |
|
| |||||||||||||| |||| |||||||| |
|
|
| T |
4653401 |
tgaaagagttaatcttacaatcaagctaca |
4653372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 347
Target Start/End: Original strand, 4783833 - 4784162
Alignment:
| Q |
18 |
tgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttata |
117 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||| || |||||||| ||||||||||||||||| || | | ||||||||| ||||||||||||| ||| |
|
|
| T |
4783833 |
tgaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaatttttcagattttcata |
4783932 |
T |
|
| Q |
118 |
gatgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgag |
217 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| ||||||||||||| | || ||||||||||||||||||||| ||||||||| |||| || |
|
|
| T |
4783933 |
gatgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctcctttggttcctgttcataaggattatgccgtgactatgggttctcaag |
4784032 |
T |
|
| Q |
218 |
aaggaagctctaaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatgggat |
317 |
Q |
| |
|
||||||||| ||||| ||| |||||||||||| || |||||||||||| |||| || ||| | ||| ||| ||||||| |||||||| || |
|
|
| T |
4784033 |
gcggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaacctatgcctacggtatatcgtgatgtcacgttgaatggaat |
4784132 |
T |
|
| Q |
318 |
cgagattttgaaaataagtgacaaaaataa |
347 |
Q |
| |
|
|||||||||||||||||||| |||||||| |
|
|
| T |
4784133 |
tgagattttgaaaataagtgataaaaataa |
4784162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 347
Target Start/End: Original strand, 4816262 - 4816591
Alignment:
| Q |
18 |
tgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttata |
117 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||| || |||||||| ||||||||||||||||| || | | ||||||||| ||||||||||||| ||| |
|
|
| T |
4816262 |
tgaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaatttttcagattttcata |
4816361 |
T |
|
| Q |
118 |
gatgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgag |
217 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| ||||||||||||| | | ||||||||||||||||||||| ||||||||| |||| | |
|
|
| T |
4816362 |
gatgatagtttggctgaactttttgctgatgtgatatggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcatg |
4816461 |
T |
|
| Q |
218 |
aaggaagctctaaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatgggat |
317 |
Q |
| |
|
||||||||| ||||| ||| |||||||||||| || |||||||| ||| |||| || ||| || ||| ||| ||||||| |||||||| || |
|
|
| T |
4816462 |
gcggaagctctcaaattgaaaaagttaatctttcgatcaagctacatcgattaccaaaacctatgccttcggtatatcgtgatgtcacgttgaatggaat |
4816561 |
T |
|
| Q |
318 |
cgagattttgaaaataagtgacaaaaataa |
347 |
Q |
| |
|
|||||||||||||||||||| |||||||| |
|
|
| T |
4816562 |
tgagattttgaaaataagtgataaaaataa |
4816591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 347
Target Start/End: Complemental strand, 4672769 - 4672444
Alignment:
| Q |
22 |
gttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttatagatg |
121 |
Q |
| |
|
||||||||| | || |||||| ||||||| || |||||||| |||||||| ||| ||| | ||| ||||||||||| |||||||||||||||| | |
|
|
| T |
4672769 |
gttgattcttctttcacttatatggtaaggttacatttttgtgagtttgacaggcttatcattaatacaggtgatagagcctttcagatttttatagcta |
4672670 |
T |
|
| Q |
122 |
ataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgagaagg |
221 |
Q |
| |
|
| | | ||||||| || |||||||| || ||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||| |
|
|
| T |
4672669 |
acactctggctgaggaaagagctgatgttataagttggagtggtgctcgtatggttcctgttcataaggattatgctgtcactatgtactctcaagaagg |
4672570 |
T |
|
| Q |
222 |
aagctctaaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatgggatcgag |
321 |
Q |
| |
|
||||||| ||||| |||||||||||||||| || ||||| |||| | | || | | | |||| ||||| | || |||||||||| ||||| |||||| |
|
|
| T |
4672569 |
aagctctcaaattgaaagagttaatctttctattaagcttcaaccactaacaaatatgaactacacaaaagacagtgatgtcacattaaatggaatcgag |
4672470 |
T |
|
| Q |
322 |
attttgaaaataagtgacaaaaataa |
347 |
Q |
| |
|
||||| ||| ||||||| |||||||| |
|
|
| T |
4672469 |
attttcaaagtaagtgataaaaataa |
4672444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 4636954 - 4636772
Alignment:
| Q |
18 |
tgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttata |
117 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||| || |||||||| ||||||||||||||||| || || ||||||||||||| |||||||| || ||| |
|
|
| T |
4636954 |
tgaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaactataaaggtgatagagtctttcagatattcata |
4636855 |
T |
|
| Q |
118 |
gatgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgt |
200 |
Q |
| |
|
||| | | ||||| |||| ||| || |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4636854 |
gataacactttggttgaagaaaaggcggatgtgatagggtggagtggtgctcgtatggttcctgttcataaggattatgttgt |
4636772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 347
Target Start/End: Complemental strand, 4864019 - 4863690
Alignment:
| Q |
18 |
tgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttata |
117 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| || |||||||| ||||||||| | |||||| ||| |||||||||||| ||||||||||| ||| |
|
|
| T |
4864019 |
tgaagttgattctaattttacttatatggtaaggttacatttttgtgagtttgatccgaatataacaaataaaggtgatagagcctttcagattttcata |
4863920 |
T |
|
| Q |
118 |
gatgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgag |
217 |
Q |
| |
|
| | ||| | ||||||| ||| ||||||||||| | ||||| ||| |||||||| |||||||||||||||||||| |||| |||| ||||| || |
|
|
| T |
4863919 |
gttaatagtatggctgaggaaaacgctgatgtgatacggtggagcggttctcgtatggttcctgttcataaggattatactgtgtctataaactctgaag |
4863820 |
T |
|
| Q |
218 |
aaggaagctctaaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataacgtaatgtcacattgaatgggat |
317 |
Q |
| |
|
||||||||||| ||||| |||||||||| ||||| | ||| |||||| | |||| | | || | ||||||| ||| |||| || |||||||| || |
|
|
| T |
4863819 |
aaggaagctctcaaattgaaagagttaacctttcgctcaagttacaacaattaccaaagaccatgtttacaaaataccgtgatgttacgttgaatggaat |
4863720 |
T |
|
| Q |
318 |
cgagattttgaaaataagtgacaaaaataa |
347 |
Q |
| |
|
||||||||| |||||||| || |||||||| |
|
|
| T |
4863719 |
cgagatttttaaaataagcgataaaaataa |
4863690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 265
Target Start/End: Complemental strand, 4643764 - 4643521
Alignment:
| Q |
22 |
gttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttatagatg |
121 |
Q |
| |
|
|||||||||| ||||||||| ||||||| || |||||||| ||||||||| | |||||| ||| ||||||||||||| |||||||| || |||||| |
|
|
| T |
4643764 |
gttgattctggttttacttatatggtaaggttacatttttgtgagtttgatccggatataacaaataaaggtgatagagtctttcagatattcatagata |
4643665 |
T |
|
| Q |
122 |
ataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctcgagaagg |
221 |
Q |
| |
|
| | ||||| |||| ||| || |||||||| ||||||||||||||| || ||||||||||||||||||||| || ||||| ||| || |||||| |
|
|
| T |
4643664 |
acactttggttgaagaaaaggcggatgtgatagggtggagtggtgctcgtttggttcctgttcataaggattatgcaatgtctatggactatcaagaagg |
4643565 |
T |
|
| Q |
222 |
aagctctaaaattaaaagagttaatctttcaataaagctacaac |
265 |
Q |
| |
|
||||||| || || |||||| |||||||||||| ||||| |||| |
|
|
| T |
4643564 |
aagctctcaacttgaaagagctaatctttcaatcaagcttcaac |
4643521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 4647621 - 4647488
Alignment:
| Q |
18 |
tgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttata |
117 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| || | ||||| ||||||||||| |||||||||||| |||||||| ||||||||| || |||||| |
|
|
| T |
4647621 |
tgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaattcaggtgatacagtttttcatatgtttata |
4647524 |
T |
|
| Q |
118 |
gatgataatttggctgaacgaaatgctgatgtgatt |
153 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||| |
|
|
| T |
4647523 |
gatgatattttggctgaacattatgctgatgtgatt |
4647488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 4663084 - 4662892
Alignment:
| Q |
22 |
gttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttatagatg |
121 |
Q |
| |
|
||||||||| | ||||| || ||||||| || |||||||| ||||||||| | |||| | ||| ||||||||||| | ||||||||||||||||||| |
|
|
| T |
4663084 |
gttgattcttcttttacatacatggtaaggttacatttttgtgagtttgatccgaatatcataaataaaggtgatagaatgtttcagatttttatagatg |
4662985 |
T |
|
| Q |
122 |
ataatttggctgaacgaaat-gctgatgtgattcattggagtggtgctcgtatgattcctgttcataaggattatgttgtgactatgtactctc |
214 |
Q |
| |
|
||||||| | |||| ||| | || |||||||| |||||| || ||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4662984 |
ataatttagttgaa-gaattagccgatgtgataaggtggagtaatggtcgtatggttcctgttcataaggattatggtgtgactatgtactctc |
4662892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 351
Target Start/End: Complemental strand, 4643495 - 4643450
Alignment:
| Q |
306 |
attgaatgggatcgagattttgaaaataagtgacaaaaataacaat |
351 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4643495 |
attgaatggaatcgagattttaaaaataagtgacaaaaataacaat |
4643450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University