View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15414_low_40 (Length: 237)
Name: NF15414_low_40
Description: NF15414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15414_low_40 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 31328508 - 31328727
Alignment:
| Q |
1 |
cttggaatgatgtttcttctcattattagtactcacatttaaaagctctcgaacggtttctgttccggactgagccaagatccaccttggattactttct |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31328508 |
cttggaatgatgttttttctcattattagtactcacatttaaaagctctcgaacggtttctgttccggactgagccaagatccaccttggattactttct |
31328607 |
T |
|
| Q |
101 |
ttcttcattttgtcaacatttgaagccgatggacgcggaggaaattttgtatgattagatttcacaaaaggggtgtgttttggaaggatcttaccattag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31328608 |
ttcttcattttgtcaacatttgaagccgatggacgcggaggaaattttgtatgattagatttcacaaaaggggtgtgttttggaaggatcttaccattag |
31328707 |
T |
|
| Q |
201 |
agaaaagttcatcagctgaa |
220 |
Q |
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|||||||||||||||||||| |
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| T |
31328708 |
agaaaagttcatcagctgaa |
31328727 |
T |
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