View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15414_low_45 (Length: 224)
Name: NF15414_low_45
Description: NF15414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15414_low_45 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 504443 - 504650
Alignment:
| Q |
1 |
ggtgaaagcagattaactcgccgaaatagtttcatacgatcttcttcatggacacttgatcctaaaagggttctcattttctttgccaccttgtaagatt |
100 |
Q |
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| T |
504443 |
ggtgaaagcagattaactcgccgaaatagtttcatacgatcttcttcatggacacttgatcctaaaagggttctcattttctttgccaccttgtaagatt |
504542 |
T |
|
| Q |
101 |
aacctaataatatatgcattttattgttgcattaattactctggtttctattttccatttttggttaatttatttgattctcaaacaggtcaagcatggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
504543 |
aacctaataatatatgcattttattgttgcattaattactctggtttctattttccatttttggttaatttatttgattctcaaacaggtcaagcatggg |
504642 |
T |
|
| Q |
201 |
aacaatgt |
208 |
Q |
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|||||||| |
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| T |
504643 |
aacaatgt |
504650 |
T |
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