View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15414_low_5 (Length: 618)

Name: NF15414_low_5
Description: NF15414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15414_low_5
NF15414_low_5
[»] chr7 (67 HSPs)
chr7 (218-456)||(12271122-12271366)
chr7 (11-160)||(12270959-12271106)
chr7 (41-149)||(31502534-31502643)
chr7 (36-147)||(11824067-11824179)
chr7 (532-599)||(12271437-12271504)
chr7 (36-149)||(22189935-22190049)
chr7 (36-137)||(33008100-33008202)
chr7 (49-150)||(44511005-44511107)
chr7 (59-146)||(7775019-7775107)
chr7 (48-116)||(19422938-19423006)
chr7 (41-116)||(14795132-14795207)
chr7 (41-116)||(15242124-15242199)
chr7 (48-149)||(12263506-12263608)
chr7 (41-129)||(32205080-32205165)
chr7 (49-149)||(27949282-27949383)
chr7 (41-148)||(17354598-17354706)
chr7 (49-149)||(6442174-6442275)
chr7 (36-148)||(13919776-13919889)
chr7 (41-149)||(27888283-27888392)
chr7 (37-116)||(24539227-24539306)
chr7 (41-113)||(32212976-32213048)
chr7 (65-116)||(17749719-17749770)
chr7 (70-147)||(11692209-11692287)
chr7 (41-149)||(46517294-46517401)
chr7 (50-127)||(8073381-8073458)
chr7 (57-149)||(44350872-44350965)
chr7 (79-150)||(19494408-19494480)
chr7 (41-109)||(27320226-27320294)
chr7 (37-129)||(32605329-32605420)
chr7 (58-105)||(2520651-2520698)
chr7 (37-112)||(39254080-39254155)
chr7 (58-109)||(41258182-41258233)
chr7 (43-109)||(45909570-45909636)
chr7 (41-113)||(26703547-26703617)
chr7 (158-198)||(7843731-7843771)
chr7 (158-198)||(7845109-7845149)
chr7 (41-109)||(13919894-13919962)
chr7 (41-113)||(22786152-22786224)
chr7 (37-109)||(25428473-25428545)
chr7 (70-114)||(31874061-31874105)
chr7 (41-85)||(42863569-42863613)
chr7 (59-126)||(4090071-4090138)
chr7 (49-159)||(25092721-25092832)
chr7 (58-101)||(39523593-39523636)
chr7 (36-106)||(19840878-19840948)
chr7 (37-87)||(27949408-27949458)
chr7 (58-116)||(32055594-32055652)
chr7 (64-102)||(43930078-43930116)
chr7 (58-123)||(3602066-3602131)
chr7 (43-104)||(20954798-20954859)
chr7 (79-108)||(27849516-27849545)
chr7 (165-198)||(34227675-34227708)
chr7 (49-129)||(45909464-45909545)
chr7 (160-196)||(7843513-7843549)
chr7 (41-109)||(14759757-14759825)
chr7 (41-129)||(25428570-25428658)
chr7 (49-105)||(26190021-26190077)
chr7 (41-109)||(26703438-26703506)
chr7 (160-196)||(26945508-26945544)
chr7 (164-196)||(26945728-26945760)
chr7 (164-196)||(31365269-31365301)
chr7 (38-110)||(31959967-31960039)
chr7 (164-196)||(38837743-38837775)
chr7 (164-196)||(43742247-43742279)
chr7 (164-196)||(44426596-44426628)
chr7 (164-196)||(46004549-46004581)
chr7 (43-95)||(48374440-48374492)
[»] chr6 (38 HSPs)
chr6 (37-149)||(34905333-34905446)
chr6 (50-129)||(5106308-5106387)
chr6 (47-137)||(31116206-31116297)
chr6 (50-149)||(10133228-10133328)
chr6 (36-149)||(445814-445928)
chr6 (37-149)||(32122792-32122905)
chr6 (36-148)||(35128794-35128907)
chr6 (48-146)||(31443967-31444066)
chr6 (41-104)||(8441953-8442016)
chr6 (41-104)||(8450757-8450820)
chr6 (63-137)||(12327287-12327362)
chr6 (41-129)||(13001693-13001781)
chr6 (49-129)||(19090306-19090386)
chr6 (41-116)||(6531402-6531477)
chr6 (57-138)||(2931578-2931660)
chr6 (41-123)||(20128868-20128950)
chr6 (65-150)||(21987317-21987403)
chr6 (41-123)||(22203920-22204002)
chr6 (64-113)||(4595766-4595815)
chr6 (51-108)||(12488156-12488213)
chr6 (36-109)||(19090208-19090281)
chr6 (41-148)||(10060860-10060968)
chr6 (41-109)||(19737433-19737501)
chr6 (87-150)||(32112786-32112850)
chr6 (66-129)||(19737526-19737589)
chr6 (63-109)||(373513-373559)
chr6 (63-109)||(9940381-9940427)
chr6 (59-113)||(12690271-12690325)
chr6 (48-125)||(2675903-2675980)
chr6 (59-116)||(3030521-3030578)
chr6 (48-109)||(10060973-10061034)
chr6 (164-196)||(10588967-10588999)
chr6 (164-196)||(11140469-11140501)
chr6 (164-196)||(19284369-19284401)
chr6 (164-196)||(21385003-21385035)
chr6 (164-196)||(22857486-22857518)
chr6 (160-196)||(25119100-25119136)
chr6 (164-196)||(25119484-25119516)
[»] chr3 (56 HSPs)
chr3 (41-149)||(5452130-5452239)
chr3 (36-149)||(28529249-28529361)
chr3 (41-114)||(20493551-20493624)
chr3 (57-149)||(26310516-26310609)
chr3 (36-149)||(37776773-37776887)
chr3 (76-149)||(18427220-18427294)
chr3 (41-149)||(52124026-52124135)
chr3 (42-129)||(27243047-27243134)
chr3 (48-149)||(41451965-41452067)
chr3 (48-129)||(24734713-24734794)
chr3 (37-129)||(13809079-13809170)
chr3 (37-129)||(40715953-40716045)
chr3 (36-149)||(46450063-46450176)
chr3 (41-150)||(46160950-46161058)
chr3 (57-119)||(45515596-45515658)
chr3 (48-109)||(24748915-24748976)
chr3 (48-129)||(46237137-46237218)
chr3 (50-126)||(22604570-22604646)
chr3 (65-150)||(20791321-20791407)
chr3 (158-211)||(27068526-27068579)
chr3 (48-129)||(50661613-50661694)
chr3 (41-125)||(29389108-29389192)
chr3 (49-129)||(37600221-37600301)
chr3 (41-109)||(38928007-38928075)
chr3 (57-129)||(41707530-41707602)
chr3 (61-129)||(46575969-46576037)
chr3 (49-148)||(54140964-54141064)
chr3 (70-125)||(138793-138848)
chr3 (65-159)||(14236044-14236139)
chr3 (58-129)||(24749001-24749072)
chr3 (164-207)||(27068530-27068573)
chr3 (49-123)||(8825076-8825150)
chr3 (160-196)||(8036794-8036830)
chr3 (36-116)||(10769829-10769909)
chr3 (51-123)||(49720099-49720171)
chr3 (41-109)||(54140891-54140959)
chr3 (36-150)||(29755496-29755611)
chr3 (66-148)||(43657067-43657150)
chr3 (161-196)||(50416475-50416510)
chr3 (41-108)||(52951377-52951444)
chr3 (79-149)||(55452085-55452156)
chr3 (64-102)||(13639426-13639464)
chr3 (57-123)||(15790466-15790532)
chr3 (51-109)||(42780681-42780739)
chr3 (61-103)||(46156741-46156783)
chr3 (43-105)||(52951475-52951537)
chr3 (40-110)||(55283167-55283237)
chr3 (92-125)||(18722535-18722568)
chr3 (159-196)||(19012576-19012613)
chr3 (36-109)||(37600123-37600196)
chr3 (71-159)||(38414678-38414767)
chr3 (58-114)||(7640701-7640757)
chr3 (164-196)||(12974204-12974236)
chr3 (41-112)||(30624634-30624703)
chr3 (164-196)||(36185919-36185951)
chr3 (164-196)||(50416578-50416610)
[»] chr4 (63 HSPs)
chr4 (36-149)||(8108952-8109066)
chr4 (37-149)||(24834575-24834688)
chr4 (48-149)||(43771134-43771236)
chr4 (41-116)||(40991693-40991768)
chr4 (48-149)||(50571872-50571974)
chr4 (48-150)||(20454548-20454649)
chr4 (50-149)||(50164405-50164505)
chr4 (41-131)||(33653578-33653668)
chr4 (37-123)||(39016660-39016746)
chr4 (36-149)||(39471153-39471267)
chr4 (50-150)||(49242180-49242281)
chr4 (51-127)||(754673-754749)
chr4 (60-127)||(722177-722244)
chr4 (48-146)||(34129473-34129572)
chr4 (35-116)||(37315558-37315636)
chr4 (56-154)||(50481610-50481709)
chr4 (37-139)||(43958148-43958250)
chr4 (59-154)||(47009208-47009304)
chr4 (49-116)||(47237845-47237912)
chr4 (63-109)||(16178697-16178743)
chr4 (41-149)||(20225411-20225518)
chr4 (48-137)||(22592312-22592402)
chr4 (65-114)||(21776951-21777000)
chr4 (77-149)||(24938485-24938558)
chr4 (67-150)||(2088734-2088818)
chr4 (65-129)||(25719204-25719268)
chr4 (58-117)||(24106750-24106809)
chr4 (58-116)||(27654495-27654553)
chr4 (48-149)||(48339410-48339512)
chr4 (73-137)||(29699522-29699587)
chr4 (66-150)||(30867001-30867086)
chr4 (66-146)||(42862494-42862575)
chr4 (48-109)||(51206157-51206218)
chr4 (82-149)||(26361378-26361446)
chr4 (49-113)||(33996042-33996106)
chr4 (42-106)||(40812039-40812103)
chr4 (49-139)||(46242024-46242113)
chr4 (41-85)||(53870998-53871042)
chr4 (161-196)||(6841816-6841851)
chr4 (161-196)||(8165757-8165792)
chr4 (38-128)||(10169737-10169825)
chr4 (70-148)||(13069971-13070049)
chr4 (165-196)||(21098146-21098177)
chr4 (161-196)||(30779338-30779373)
chr4 (161-196)||(33883289-33883324)
chr4 (80-127)||(43124607-43124654)
chr4 (78-128)||(51206081-51206131)
chr4 (49-119)||(51904717-51904787)
chr4 (171-212)||(1492871-1492912)
chr4 (161-194)||(17109714-17109747)
chr4 (167-196)||(27865630-27865659)
chr4 (57-137)||(50879473-50879554)
chr4 (164-196)||(1492670-1492702)
chr4 (79-150)||(2860916-2860988)
chr4 (164-196)||(12722735-12722767)
chr4 (164-196)||(17109932-17109964)
chr4 (164-196)||(21995668-21995700)
chr4 (164-196)||(31763122-31763154)
chr4 (164-196)||(36924239-36924271)
chr4 (37-109)||(39016777-39016849)
chr4 (59-103)||(40615247-40615291)
chr4 (73-129)||(44832496-44832552)
chr4 (79-123)||(52671869-52671913)
[»] chr2 (61 HSPs)
chr2 (37-149)||(9470078-9470191)
chr2 (41-116)||(45554568-45554643)
chr2 (36-149)||(12989187-12989301)
chr2 (38-149)||(6980190-6980302)
chr2 (41-115)||(3804585-3804659)
chr2 (36-150)||(11539419-11539536)
chr2 (36-145)||(18511283-18511393)
chr2 (36-126)||(26767855-26767945)
chr2 (48-150)||(15508922-15509025)
chr2 (37-150)||(44274232-44274345)
chr2 (41-129)||(42182890-42182978)
chr2 (49-149)||(24497201-24497302)
chr2 (36-129)||(28898128-28898221)
chr2 (49-149)||(30718397-30718497)
chr2 (57-149)||(38464180-38464273)
chr2 (49-113)||(25666700-25666764)
chr2 (48-131)||(8009521-8009604)
chr2 (50-113)||(36471945-36472008)
chr2 (40-122)||(16719528-16719610)
chr2 (48-149)||(34142209-34142311)
chr2 (36-129)||(37228494-37228588)
chr2 (57-137)||(10981535-10981616)
chr2 (48-116)||(1107046-1107114)
chr2 (69-129)||(1110227-1110287)
chr2 (63-119)||(42579758-42579814)
chr2 (38-125)||(4602962-4603049)
chr2 (161-196)||(22596299-22596334)
chr2 (65-116)||(41805880-41805931)
chr2 (65-112)||(43404414-43404461)
chr2 (42-112)||(2122797-2122867)
chr2 (67-129)||(4964764-4964826)
chr2 (43-116)||(31494211-31494282)
chr2 (58-116)||(43400151-43400209)
chr2 (48-108)||(11729715-11729775)
chr2 (49-108)||(17188076-17188133)
chr2 (41-109)||(28898035-28898103)
chr2 (41-109)||(37719835-37719903)
chr2 (161-196)||(12449049-12449084)
chr2 (48-115)||(31395550-31395617)
chr2 (36-111)||(33678224-33678299)
chr2 (36-115)||(41546133-41546211)
chr2 (39-109)||(4964669-4964739)
chr2 (50-108)||(17505921-17505979)
chr2 (173-207)||(19246874-19246908)
chr2 (57-119)||(19639110-19639172)
chr2 (57-119)||(19837703-19837765)
chr2 (57-138)||(25730520-25730602)
chr2 (58-116)||(37077978-37078036)
chr2 (36-85)||(19193496-19193545)
chr2 (163-196)||(20661393-20661426)
chr2 (37-102)||(27968915-27968980)
chr2 (37-102)||(28091607-28091672)
chr2 (37-102)||(28101839-28101904)
chr2 (164-196)||(15253034-15253066)
chr2 (164-196)||(24183611-24183643)
chr2 (164-196)||(25575321-25575353)
chr2 (48-112)||(29795813-29795877)
chr2 (43-95)||(30706397-30706449)
chr2 (164-196)||(31783791-31783823)
chr2 (164-196)||(31783999-31784031)
chr2 (36-112)||(40535098-40535174)
[»] chr8 (43 HSPs)
chr8 (38-149)||(32072095-32072207)
chr8 (41-150)||(1977242-1977352)
chr8 (36-147)||(9952829-9952941)
chr8 (49-149)||(28413939-28414040)
chr8 (63-150)||(17499302-17499390)
chr8 (41-146)||(5979881-5979987)
chr8 (48-149)||(8903860-8903962)
chr8 (37-129)||(6387560-6387650)
chr8 (41-149)||(8914772-8914881)
chr8 (41-149)||(16983395-16983504)
chr8 (57-144)||(34861262-34861348)
chr8 (36-116)||(41727426-41727506)
chr8 (65-147)||(13407396-13407479)
chr8 (48-126)||(35151823-35151901)
chr8 (66-147)||(35689506-35689588)
chr8 (78-150)||(31301153-31301226)
chr8 (51-150)||(11962750-11962850)
chr8 (57-109)||(13856506-13856558)
chr8 (41-150)||(23685132-23685242)
chr8 (48-149)||(24055995-24056097)
chr8 (63-129)||(36804930-36804996)
chr8 (58-119)||(16441908-16441969)
chr8 (48-108)||(12212130-12212190)
chr8 (48-108)||(12456558-12456618)
chr8 (65-117)||(44709296-44709348)
chr8 (59-129)||(7599513-7599583)
chr8 (92-149)||(17741597-17741655)
chr8 (41-149)||(43506539-43506645)
chr8 (41-106)||(31691625-31691690)
chr8 (164-196)||(186095-186127)
chr8 (87-149)||(13214542-13214605)
chr8 (161-196)||(15809854-15809889)
chr8 (161-196)||(35448624-35448659)
chr8 (49-149)||(17716862-17716961)
chr8 (70-116)||(45218621-45218667)
chr8 (65-150)||(45246459-45246545)
chr8 (59-112)||(16314383-16314436)
chr8 (64-109)||(16441828-16441873)
chr8 (58-119)||(24184385-24184446)
chr8 (167-196)||(41451249-41451278)
chr8 (164-196)||(17656616-17656648)
chr8 (164-196)||(17792906-17792938)
chr8 (164-196)||(23567484-23567516)
[»] chr1 (70 HSPs)
chr1 (49-128)||(26980354-26980433)
chr1 (41-129)||(6133715-6133803)
chr1 (37-148)||(41095680-41095792)
chr1 (41-127)||(25543341-25543427)
chr1 (41-129)||(931375-931463)
chr1 (36-149)||(41958081-41958193)
chr1 (41-150)||(19101670-19101780)
chr1 (48-149)||(28218118-28218220)
chr1 (36-148)||(32848654-32848767)
chr1 (36-116)||(18157034-18157114)
chr1 (41-148)||(41917996-41918104)
chr1 (48-149)||(10659838-10659941)
chr1 (63-149)||(29673498-29673585)
chr1 (41-150)||(22540369-22540479)
chr1 (41-129)||(2225227-2225313)
chr1 (36-129)||(11135735-11135828)
chr1 (58-119)||(28274804-28274865)
chr1 (41-109)||(13388335-13388403)
chr1 (41-105)||(39039470-39039534)
chr1 (37-116)||(13114774-13114853)
chr1 (43-116)||(4578681-4578752)
chr1 (69-150)||(36566925-36567007)
chr1 (41-149)||(3872704-3872812)
chr1 (36-129)||(11430437-11430530)
chr1 (57-149)||(33193067-33193160)
chr1 (57-149)||(44271935-44272028)
chr1 (48-148)||(44739126-44739227)
chr1 (58-107)||(52158671-52158720)
chr1 (41-129)||(14094092-14094180)
chr1 (65-116)||(15523235-15523286)
chr1 (65-116)||(15531229-15531280)
chr1 (63-114)||(32211890-32211941)
chr1 (58-116)||(14341025-14341083)
chr1 (64-149)||(15928579-15928665)
chr1 (76-149)||(50539160-50539234)
chr1 (49-149)||(11987635-11987736)
chr1 (68-129)||(50773202-50773263)
chr1 (37-148)||(8899011-8899123)
chr1 (156-196)||(33156982-33157022)
chr1 (59-150)||(37553018-37553110)
chr1 (161-196)||(10974628-10974663)
chr1 (42-109)||(11135853-11135920)
chr1 (165-196)||(18057823-18057854)
chr1 (57-128)||(27570242-27570313)
chr1 (58-144)||(28941840-28941927)
chr1 (58-101)||(31602077-31602120)
chr1 (161-196)||(31763987-31764022)
chr1 (85-116)||(31866361-31866392)
chr1 (57-147)||(41948218-41948309)
chr1 (161-196)||(42133939-42133974)
chr1 (67-106)||(50424980-50425019)
chr1 (58-116)||(21977205-21977263)
chr1 (64-102)||(24886061-24886099)
chr1 (59-101)||(27464749-27464791)
chr1 (80-149)||(30678981-30679051)
chr1 (41-110)||(21466681-21466750)
chr1 (61-149)||(49730885-49730974)
chr1 (164-196)||(1395365-1395397)
chr1 (164-196)||(9041065-9041097)
chr1 (78-114)||(9165340-9165376)
chr1 (41-109)||(11430555-11430622)
chr1 (164-196)||(14229170-14229202)
chr1 (76-116)||(15660929-15660969)
chr1 (164-196)||(17893287-17893319)
chr1 (49-129)||(28109877-28109957)
chr1 (157-193)||(31763766-31763802)
chr1 (164-196)||(32143783-32143815)
chr1 (41-109)||(41095607-41095675)
chr1 (164-196)||(49992516-49992548)
chr1 (37-109)||(50773105-50773177)
[»] scaffold0543 (1 HSPs)
scaffold0543 (63-149)||(9687-9774)
[»] scaffold0492 (1 HSPs)
scaffold0492 (63-149)||(11233-11320)
[»] chr5 (51 HSPs)
chr5 (41-149)||(10142046-10142153)
chr5 (57-150)||(17537171-17537265)
chr5 (41-129)||(4959279-4959367)
chr5 (41-127)||(28490815-28490901)
chr5 (161-210)||(25545572-25545621)
chr5 (41-149)||(34368361-34368470)
chr5 (36-129)||(42224682-42224775)
chr5 (79-149)||(5413807-5413878)
chr5 (57-154)||(4714766-4714864)
chr5 (37-142)||(31542320-31542426)
chr5 (58-111)||(1649568-1649621)
chr5 (70-137)||(10253164-10253232)
chr5 (41-113)||(30325981-30326053)
chr5 (48-128)||(34384783-34384863)
chr5 (50-149)||(37455359-37455459)
chr5 (36-116)||(40971557-40971637)
chr5 (82-149)||(41330463-41330531)
chr5 (63-149)||(10950109-10950196)
chr5 (70-148)||(13456236-13456315)
chr5 (63-149)||(25710542-25710629)
chr5 (36-149)||(25630803-25630917)
chr5 (65-150)||(27592521-27592607)
chr5 (63-149)||(28434888-28434973)
chr5 (159-196)||(11660786-11660823)
chr5 (49-149)||(28611848-28611949)
chr5 (41-149)||(39246609-39246718)
chr5 (60-144)||(43541871-43541956)
chr5 (36-112)||(28223884-28223960)
chr5 (58-114)||(32309498-32309554)
chr5 (161-196)||(22695554-22695589)
chr5 (165-196)||(28069246-28069277)
chr5 (41-112)||(32050418-32050489)
chr5 (165-196)||(36864282-36864313)
chr5 (63-145)||(41105644-41105727)
chr5 (162-196)||(20134195-20134229)
chr5 (43-109)||(40971453-40971519)
chr5 (49-110)||(2525583-2525644)
chr5 (76-129)||(25564037-25564090)
chr5 (164-196)||(3340588-3340620)
chr5 (66-110)||(4959391-4959435)
chr5 (164-196)||(7286751-7286783)
chr5 (65-101)||(7584863-7584899)
chr5 (164-196)||(15559047-15559079)
chr5 (41-109)||(17568700-17568768)
chr5 (164-196)||(20134413-20134445)
chr5 (49-113)||(26072112-26072176)
chr5 (36-108)||(26072218-26072290)
chr5 (63-146)||(32050330-32050414)
chr5 (164-196)||(39861794-39861826)
chr5 (41-109)||(42224589-42224657)
chr5 (78-149)||(43405431-43405503)
[»] scaffold1450 (1 HSPs)
scaffold1450 (164-211)||(748-795)
[»] scaffold0005 (1 HSPs)
scaffold0005 (58-116)||(296854-296912)
[»] scaffold0155 (1 HSPs)
scaffold0155 (76-129)||(35630-35683)
[»] scaffold0018 (1 HSPs)
scaffold0018 (78-149)||(27850-27922)
[»] scaffold0838 (1 HSPs)
scaffold0838 (57-130)||(2239-2312)
[»] scaffold0832 (1 HSPs)
scaffold0832 (57-130)||(2270-2343)
[»] scaffold0204 (1 HSPs)
scaffold0204 (66-149)||(26932-27016)
[»] scaffold0516 (1 HSPs)
scaffold0516 (161-196)||(1262-1297)
[»] scaffold0249 (1 HSPs)
scaffold0249 (161-196)||(23539-23574)
[»] scaffold0102 (1 HSPs)
scaffold0102 (159-196)||(33609-33646)
[»] scaffold0129 (1 HSPs)
scaffold0129 (164-196)||(20134-20166)


Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 218 - 456
Target Start/End: Original strand, 12271122 - 12271366
Alignment:
Q  218 agagggtgtttaaaagagagggttgctagcactacttataggttaataatttgatccaaattggtaatagtgaaaaatgaatggaatggaatggaggctt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12271122 agagggtgtttaaaagagagggttgctagcactacttataggttaataatttgatccaaattggtaatagtgaaaaatgaatggaatggaatggaggctt 12271221  T
Q  318 acggggggaagacaacgaacgccaagagacttgggtggaggagtaatctcaataactttatatgggtggatactgttactacctcgt------tctctgt 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||    
T  12271222 acggggggaagacaacgaacgccaagagacttgggtggaggagtaatctcaataactttatatgggtggatactgttactacctcgttctctgtctctgt 12271321  T
Q  412 ctctctttctactgcatgatacctcaaacaacatcgtctgcacaa 456  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12271322 ctctctttctactgcatgatacctcaaacaacatcgtctgcacaa 12271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 12270959 - 12271106
Alignment:
Q  11 cagagagagtaactaatatactaggtgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtat 110  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||  ||||||||||||||||| || ||  ||||||||| |  ||||||||||||||||    
T  12270959 cagagagagtaactaatatactatgtgaggaatgctagcaacac--acttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtat 12271056  T
Q  111 gtcccatcattttgtgtggttctattttctaagtgtagatacacgataag 160  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  12271057 gtcccaccactttgtgtggttctattttcaaagtgtagatacacgataag 12271106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 31502643 - 31502534
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttc 139  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||| ||||||    
T  31502643 aatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaattttc 31502544  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  31502543 aaagtgtaga 31502534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 11824067 - 11824179
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    ||||||||| | |||||||| | |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||| |    
T  11824067 tgagaaatgttagcaacactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaa 11824166  T
Q  135 ttttctaagtgta 147  Q
    ||||| |||||||    
T  11824167 ttttcaaagtgta 11824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 532 - 599
Target Start/End: Original strand, 12271437 - 12271504
Alignment:
Q  532 cttcttcttcttgtatgatgaagcaaaacctatgttcatcatgttcgacgatgccattgccattctcc 599  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  12271437 cttcttcttcttgtatgatgaagcaagacctatgttcatcatgttggacgatgccattgccattctcc 12271504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 22189935 - 22190049
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    |||| |||||| | |||||| | |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||| || ||||||| ||||| |    
T  22189935 tgaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaa 22190034  T
Q  135 ttttctaagtgtaga 149  Q
    ||||| |||||||||    
T  22190035 ttttcaaagtgtaga 22190049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 33008100 - 33008202
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    |||| |||||| |||||||| |||||| |||||| |||||| ||||||||||||| ||||||||||||| ||||||||||| || ||||||| |||||||    
T  33008100 tgaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttcta 33008199  T
Q  135 ttt 137  Q
    |||    
T  33008200 ttt 33008202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 44511107 - 44511005
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgta 147  Q
    ||||||| |||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||||| ||||| || |||| |||||| | |||||    
T  44511107 caacacttacttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaatgtgta 44511008  T
Q  148 gat 150  Q
    |||    
T  44511007 gat 44511005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 7775019 - 7775107
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgt 146  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| || |||||||| |||| |||||| ||||||    
T  7775019 ttttcaacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgt 7775107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 19423006 - 19422938
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||| |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  19423006 gcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtccca 19422938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 14795132 - 14795207
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||| |||||||| |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||    
T  14795132 aatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtccca 14795207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 15242124 - 15242199
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||| |||||||| |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||    
T  15242124 aatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtccca 15242199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 12263608 - 12263506
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||||| |||||||||||||||||||| ||  ||||||||| | ||||| |||||||||||||||||||| ||||||| || || |||||| ||||||    
T  12263608 gcaacacttacttttcaacactctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgt 12263509  T
Q  147 aga 149  Q
    |||    
T  12263508 aga 12263506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 32205080 - 32205165
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| |||||||| |||||| |||||||||||||   ||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  32205080 aatgctagcaacactcacttttgaacactctctcta---ctcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgg 32205165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 27949282 - 27949383
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgta 147  Q
    ||||||| |||||| ||||||||||||||||||||||||| | ||||||||||||||  ||||||| | ||||||||||| |||| | |||| |||||||    
T  27949282 caacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgta 27949381  T
Q  148 ga 149  Q
    ||    
T  27949382 ga 27949383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 17354706 - 17354598
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| ||||||||   |||| | |||||||||||||||||| |||||| ||||||||||||||||||||||||| || ||| ||| |||||||||| |    
T  17354706 aatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttcc 17354607  T
Q  140 taagtgtag 148  Q
     ||||||||    
T  17354606 aaagtgtag 17354598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 6442174 - 6442275
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgta 147  Q
    ||||||| | |||||||||||||||||| |||||| || ||| ||| ||||||||||||||||| ||| ||||||||| || ||| |||||| |||||||    
T  6442174 caacactcatttttcaacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgta 6442273  T
Q  148 ga 149  Q
    ||    
T  6442274 ga 6442275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 13919776 - 13919889
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    ||||||||||| ||||||||  ||||| | ||||||||||| ||||| ||| ||| |||| |||||||||||||||||||| || ||| ||| ||||| |    
T  13919776 tgagaaatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 13919875  T
Q  135 ttttctaagtgtag 148  Q
    ||||| ||||||||    
T  13919876 ttttcaaagtgtag 13919889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 27888283 - 27888392
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| |||||||| |||||| | ||||||||||||||||||| || |  |||||| |||||||||||||||||| || ||||||| ||||| |||||     
T  27888283 aatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttt 27888382  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  27888383 aaagtgtaga 27888392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 24539306 - 24539227
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||| || |||||  |||||  |||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  24539306 gagaaatgctagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaatatatgtccca 24539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 32213048 - 32212976
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    |||||| | |||||| |||||| ||||||||||||| |||||  |||||| ||||||||||||||||||||||    
T  32213048 aatgctagtaacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtc 32212976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 17749719 - 17749770
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  17749719 acactctctctaacactcactcttttattggataaaatcaatatatgtccca 17749770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 11692209 - 11692287
Alignment:
Q  70 ctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgta 147  Q
    |||||||| | |||||||||| ||||||||||||||||||||||| | || ||||||| ||||| |||||| |||||||    
T  11692209 ctctctaatattcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgta 11692287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 46517294 - 46517401
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt-gtggttctattttc 139  Q
    |||||| |||||||| |||||| ||||||||||  | ||||||||| ||| |||||| |||||||||||| ||||| |||| ||| | ||||| ||||||    
T  46517294 aatgctagcaacactcactttttaacactctct--agcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttc 46517391  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  46517392 aaagtgtaga 46517401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 8073458 - 8073381
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt 127  Q
    |||||| | ||||||||| |||  ||| ||||||||||||| | ||||||||||||||||||||||| || |||||||    
T  8073458 aacactcatttttcaacattcttcctagcactcactcttttatcggatgaaatcaatgtatgtcccaccactttgtgt 8073381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 44350965 - 44350872
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||||| |||||||||  |||| |||| |||||| ||||||||||||||| | ||| ||||| | ||||| |||||| |||||||||    
T  44350965 acttttcaacactttctctaacatccacttttttattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtaga 44350872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 19494480 - 19494408
Alignment:
Q  79 actcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtagat 150  Q
    |||||||||||| |||| |||||||||||||||||||| || ||| ||| ||||| |||||| ||||||||||    
T  19494480 actcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagat 19494408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 27320226 - 27320294
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| |||||| | | |||||||||||||||| ||||||||||||||| ||| || |||||||||||    
T  27320226 aatgctagcaacattcatttttcaacactctctccaacactcactcttttattgaataaaatcaatgta 27320294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 32605329 - 32605420
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||| | ||||||||  |||||||||||||| | || |||||| |||||| | |||||||||||||||||||| ||| | |||||||||    
T  32605329 gagaaatgttagcaacacttgcttttcaacactctttttagcactcattcttttat-ggatgaaatcaatgtatgtctcattactttgtgtgg 32605420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 2520651 - 2520698
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaa 105  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  2520651 cttttcaacactctctccaacactcactcttttattgggtgaaatcaa 2520698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 39254080 - 39254155
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    |||||||||| |||||| | ||||||||||| ||||| || ||||||||||||| ||| || |||| |||||||||    
T  39254080 gagaaatgctagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgt 39254155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 41258182 - 41258233
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||||||||||||||||||| |||| || | |||||||||||||||||||    
T  41258182 cttttcaacactctctctaacagtcaccctctcgttggatgaaatcaatgta 41258233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 45909636 - 45909570
Alignment:
Q  43 tgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||| ||||||||  ||||| || |||||||||||||||||||||||| |||| | |||||||||||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgta 45909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 26703617 - 26703547
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    |||||| ||||||||  ||||| | || |||||||| ||||||||||||| |||| |||||||||||||||||    
T  26703617 aatgctagcaacact--cttttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtc 26703547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 7843771 - 7843731
Alignment:
Q  158 aagggctgcggttatggtgtataaggaaatccttatgcaac 198  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  7843771 aaggggtgcggttatggtgtataaagaaatccttatgcaac 7843731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 7845149 - 7845109
Alignment:
Q  158 aagggctgcggttatggtgtataaggaaatccttatgcaac 198  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  7845149 aaggggtgcggttatggtgcataaggaaatccttatgcaac 7845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 13919962 - 13919894
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| | ||||||||||| ||||||||| ||| |||| |||||||||||||    
T  13919962 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 13919894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 22786152 - 22786224
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    |||||| ||||||||  ||||| | ||||||||||| |||||||| |||| || | |||||||||||||||||    
T  22786152 aatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtc 22786224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 25428473 - 25428545
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||||| | ||||||||  ||||| | |||||||| || ||||||||||||| |||||| |||||||||||    
T  25428473 gagaaatgatagcaacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgta 25428545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 31874061 - 31874105
Alignment:
Q  70 ctctctaacactcactcttttgttggatgaaatcaatgtatgtcc 114  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||    
T  31874061 ctctctagcactcacttttttattggatgaaatcaatgtatgtcc 31874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 42863613 - 42863569
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcact 85  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||    
T  42863613 aatgctagcaacactcacttttaaacactctctctaacactcact 42863569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 4090138 - 4090071
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg 126  Q
    ||||||||| ||||| ||||||| | | |||| ||||||||||||||| |||| ||||||| ||||||    
T  4090138 ttttcaacattctctttaacacttatttttttattggatgaaatcaatctatgacccatcactttgtg 4090071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 25092832 - 25092721
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgta 147  Q
    ||||||| |||||||||||||||||    ||| ||||||||  || |||| ||||||||||||||| |  | |||||||| |||| ||||||||||| ||    
T  25092832 caacactcacttttcaacactctcttccgcacccactctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttctaagtata 25092733  T
Q  148 gatacacgataa 159  Q
    || |||| ||||    
T  25092732 gacacacaataa 25092721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 39523593 - 39523636
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaa 101  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||    
T  39523593 cttttcaacactctgtctaacactcattcttttattggatgaaa 39523636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 19840878 - 19840948
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaat 106  Q
    |||| |||||| ||||||||   |||| | ||||||||||| ||||||||||||| |||| ||||||||||    
T  19840878 tgaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 27949458 - 27949408
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactct 87  Q
    |||||||||| ||||||||  ||||| |||||||||||||| |||||||||    
T  27949458 gagaaatgctagcaacactctcttttgaacactctctctaatactcactct 27949408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 32055594 - 32055652
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||| |||||| ||||||||||| |||| ||| ||||||||||||| | |||||||||    
T  32055594 cttttgaacactatctctaacactaactcatttattggatgaaatcattttatgtccca 32055652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 43930116 - 43930078
Alignment:
Q  64 aacactctctctaacactcactcttttgttggatgaaat 102  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  43930116 aacactctctctaacactcactcttttattgggtgaaat 43930078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 3602131 - 3602066
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcatttt 123  Q
    ||||| ||| ||||| |||||||| ||||| |||||||||||||  |||||| |||||| ||||||    
T  3602131 cttttaaaccctctccctaacacttactctcttgttggatgaaagtaatgtaggtcccaccatttt 3602066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 20954859 - 20954798
Alignment:
Q  43 tgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatca 104  Q
    |||| ||||||||  ||||||||||||||||| |||||||||| |||| |||| | ||||||    
T  20954859 tgctagcaacactctcttttcaacactctctcaaacactcacttttttattggcttaaatca 20954798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 27849516 - 27849545
Alignment:
Q  79 actcactcttttgttggatgaaatcaatgt 108  Q
    ||||||||||||||||||||||||||||||    
T  27849516 actcactcttttgttggatgaaatcaatgt 27849545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 34227675 - 34227708
Alignment:
Q  165 gcggttatggtgtataaggaaatccttatgcaac 198  Q
    |||||||||||| |||||||||||||||||||||    
T  34227675 gcggttatggtgcataaggaaatccttatgcaac 34227708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 45909464 - 45909545
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttg-ttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||| ||||| | ||||||| ||| || ||||||||||  |||| |||||||||||||||||||| || ||| |||||    
T  45909464 caacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgg 45909545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 7843513 - 7843549
Alignment:
Q  160 gggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||||| |||| |||||||||||||    
T  7843513 gggctgcggttatggtgtctaagaaaatccttatgca 7843549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 14759825 - 14759757
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| | ||||||| ||| ||| ||||||||| ||||||||||| ||||||    
T  14759825 aatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 14759757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 25428658 - 25428570
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| ||||||||  ||||| | |||||| | ||  |||||||||||| |||  |||||||||||||||||||| || ||| |||||    
T  25428658 aatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgg 25428570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 26190077 - 26190021
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaa 105  Q
    |||||||  ||||| |||||| |||||||||||||||||||| |||| | |||||||    
T  26190077 caacactctcttttgaacactttctctaacactcactcttttattgggtaaaatcaa 26190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 26703438 - 26703506
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||| | | ||||||||||| ||||||||||||| |||| |||||| ||||||    
T  26703438 aatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgta 26703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 26945508 - 26945544
Alignment:
Q  160 gggctgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  26945508 gggctgcggttatggtgcataaggaaattcttatgca 26945544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 26945760 - 26945728
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  26945760 tgcggttatggtgcataaggaaatccttatgca 26945728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 31365269 - 31365301
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  31365269 tgcggttatggtgcataaggaaatccttatgca 31365301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 31960039 - 31959967
Alignment:
Q  38 agaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtat 110  Q
    |||||||||  |||||||  ||||| | ||||||||||| ||||||||  ||| ||||||||||| |||||||    
T  31960039 agaaatgctaacaacactctcttttgagcactctctctagcactcacttatttattggatgaaattaatgtat 31959967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 38837775 - 38837743
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  38837775 tgcggttatggtgcataaggaaatccttatgca 38837743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 43742247 - 43742279
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  43742247 tgcggttatggtgcataaggaaatccttatgca 43742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 44426596 - 44426628
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  44426596 tgcggttatggtgcataaggaaatccttatgca 44426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 46004581 - 46004549
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  46004581 tgcggttatggtgcataaggaaatccttatgca 46004549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 48374440 - 48374492
Alignment:
Q  43 tgctggcaacactaacttttcaacactctctctaacactcactcttttgttgg 95  Q
    |||| ||||||||  ||||| |||||||||||||| ||||||||| |||||||    
T  48374440 tgctagcaacactctcttttgaacactctctctaatactcactctcttgttgg 48374492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 3e-31; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 34905333 - 34905446
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctat 135  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||| | ||||| ||    
T  34905333 gagaaatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaat 34905432  T
Q  136 tttctaagtgtaga 149  Q
    |||| |||||||||    
T  34905433 tttcaaagtgtaga 34905446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 5106308 - 5106387
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| ||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| || |||||||||    
T  5106308 aacactcacttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgg 5106387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 31116297 - 31116206
Alignment:
Q  47 ggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattt 137  Q
    ||||||||| |||||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||  | |||||||| |||||||||    
T  31116297 ggcaacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctattt 31116206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 10133328 - 10133228
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt-gtggttctattttctaagtgtag 148  Q
    |||||| |||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| || ||| | | ||||| |||||| ||||||||    
T  10133328 aacactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtag 10133229  T
Q  149 a 149  Q
    |    
T  10133228 a 10133228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 445814 - 445928
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    |||| |||||| |||| ||| | ||||||||||| |||||| |||||||| |||| |||||||||||||||||||||| || || ||||||| ||||| |    
T  445814 tgaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaa 445913  T
Q  135 ttttctaagtgtaga 149  Q
    ||||| |||| ||||    
T  445914 ttttcaaagtctaga 445928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 32122792 - 32122905
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctat 135  Q
    ||||||||||  |||||||  |||||||||||||| || | ||||||||  ||| ||||||||||||||| ||||||||| ||||||||| | |||| ||    
T  32122792 gagaaatgctaacaacactctcttttcaacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggagttcaat 32122891  T
Q  136 tttctaagtgtaga 149  Q
    |||| |||||||||    
T  32122892 tttcaaagtgtaga 32122905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 35128907 - 35128794
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    |||||| |||| ||||||||  ||||| ||||||||||||| || |||||||||| |||| | |||||||||||||||||| || ||| ||| ||||| |    
T  35128907 tgagaagtgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttcca 35128808  T
Q  135 ttttctaagtgtag 148  Q
    ||||| ||||||||    
T  35128807 ttttcaaagtgtag 35128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 31443967 - 31444066
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||| ||| ||||||||||||| | ||||||||| |||||| ||||||||||| ||| ||||| ||| |||||||||| ||||| |||||| ||||||    
T  31443967 gcaacaataatttttcaacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaattttcaaagtgt 31444066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 8442016 - 8441953
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatca 104  Q
    |||||| ||| |||| | |||||||||||||||||||||||||||| ||| |||||||||||||    
T  8442016 aatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatca 8441953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 8450820 - 8450757
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatca 104  Q
    |||||| ||| |||| | |||||||||||||||||||||||||||| ||| |||||||||||||    
T  8450820 aatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatca 8450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 12327362 - 12327287
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattt 137  Q
    |||||||||||||| || |||||||||| ||||||  ||||||||||||||| | |||||||||| ||||||||||    
T  12327362 caacactctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtgtgggttctattt 12327287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 13001693 - 13001781
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| | |||||| |||||||| |||||||||||||| ||| | |||  |||||| |||| |||||||||| ||||||||| |||||    
T  13001693 aatgctagtaacactcacttttcagcactctctctaacattcattttttcattggataaaataaatgtatgtcacatcattttatgtgg 13001781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 19090386 - 19090306
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||  ||||| | ||||||||||| ||| ||||||||| |||| |||||||||||||||||||| || ||| |||||    
T  19090386 caacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgg 19090306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 6531477 - 6531402
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||| ||||||||  ||||| |  |||||||| | ||||||||||||| |||| ||||||||||||||||||||    
T  6531477 aatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtccca 6531402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 2931578 - 2931660
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt-gtggttctatttt 138  Q
    |||||||||||||||||||| || || ||  ||| || |||||||||||||||||||| | |||||||| ||||||| |||||    
T  2931578 acttttcaacactctctctatcattcgcttatttatttgatgaaatcaatgtatgtcctaccattttgtggtggttcaatttt 2931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 20128950 - 20128868
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcatttt 123  Q
    |||||| |||||||| ||||||  ||| | |||| |||| |||||| ||| || | |||||||||||||||||||||||||||    
T  20128950 aatgctagcaacacttacttttttacattttctcaaacagtcactcatttatttggtgaaatcaatgtatgtcccatcatttt 20128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 21987317 - 21987403
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtagat 150  Q
    ||||||||| || |||||||| |||| ||||||||||||||||||| ||||| || ||| || | ||||||||| | ||||||||||    
T  21987317 acactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagat 21987403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 22203920 - 22204002
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcatttt 123  Q
    |||||| |||||||| ||||||  ||| | |||| |||| |||||| ||| || | |||||||||||||||||||||||||||    
T  22203920 aatgctagcaacacttacttttttacattttctcaaacagtcactcatttatttggtgaaatcaatgtatgtcccatcatttt 22204002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 4595766 - 4595815
Alignment:
Q  64 aacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    ||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  4595766 aacactctctctagcactcactcttttattgagtgaaatcaatgtatgtc 4595815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 12488213 - 12488156
Alignment:
Q  51 acactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgt 108  Q
    |||||| | |||||||||| | ||||| |||||||||||| |||||||||||||||||    
T  12488213 acactatcatttcaacactttttctaatactcactcttttattggatgaaatcaatgt 12488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 19090208 - 19090281
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||| |||||| ||||||||  ||||| | ||||||||||| ||||||||||||| |||| |||| ||||||||    
T  19090208 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgta 19090281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 10060860 - 10060968
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| ||||||||  ||||| |||||||| | ||||| |||||||||| ||   |||||||||||||||||||  || ||| ||| ||||| ||||||    
T  10060860 aatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccattttc 10060959  T
Q  140 taagtgtag 148  Q
     ||||||||    
T  10060960 aaagtgtag 10060968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 19737433 - 19737501
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| |||| |||||||| ||||||||||||| |||| | |||||||||||    
T  19737433 aatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgta 19737501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 32112850 - 32112786
Alignment:
Q  87 ttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtagat 150  Q
    |||| |||||||||||||||| ||||| || |||||||||| |||| ||||||| ||||||||||    
T  32112850 ttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagat 32112786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 19737589 - 19737526
Alignment:
Q  66 cactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||||||||| ||||||||||||  |||| |||||||||||||| ||| |||| ||| |||||    
T  19737589 cactctctctagcactcactctttaattgggtgaaatcaatgtatatcctatcactttatgtgg 19737526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 373559 - 373513
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    ||||||||||||||||||| ||| |||| |||||| |||||||||||    
T  373559 caacactctctctaacacttactattttattggataaaatcaatgta 373513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 9940381 - 9940427
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    ||||| |||||||| ||||||||||||| |||| |||||||||||||    
T  9940381 caacattctctctagcactcactcttttattgggtgaaatcaatgta 9940427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 12690271 - 12690325
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    |||| ||||||||||||||||||  ||||||| ||||||||||| |||| |||||    
T  12690271 ttttaaacactctctctaacacttgctcttttattggatgaaattaatgcatgtc 12690325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 2675903 - 2675980
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt 125  Q
    |||||||| | ||||||||| | | | ||||| |||||||||| ||| ||||| ||||||||||||||| || |||||    
T  2675903 gcaacactcatttttcaacattttttttaacattcactcttttattgaatgaattcaatgtatgtcccaccactttgt 2675980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 3030521 - 3030578
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||||||||||||||||| | ||||||| || ||||||||||  | |||||||||||    
T  3030521 ttttcaacactctctctaatattcactctgttattggatgaaactattgtatgtccca 3030578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 10061034 - 10060973
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    ||||||||  ||||| | |||||||||||||||||||| |||| |||| ||| |||||||||    
T  10061034 gcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgta 10060973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 10588999 - 10588967
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  10588999 tgcggttatggtgcataaggaaatccttatgca 10588967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 11140501 - 11140469
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||| |||||||||||||||||||||||||    
T  11140501 tgcggttttggtgtataaggaaatccttatgca 11140469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 19284369 - 19284401
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  19284369 tgcggttatggtgcataaggaaatccttatgca 19284401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 21385035 - 21385003
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  21385035 tgcggttatggtgcataaggaaatccttatgca 21385003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 22857486 - 22857518
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  22857486 tgcggttatggtgcataaggaaatccttatgca 22857518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 25119100 - 25119136
Alignment:
Q  160 gggctgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  25119100 gggctgcggttatggtgcataaggaaattcttatgca 25119136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 25119516 - 25119484
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  25119516 tgcggttatggtgcataaggaaatccttatgca 25119484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 5452239 - 5452130
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttc 139  Q
    |||||| |||||||| ||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||| ||| ||||||    
T  5452239 aatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaattttc 5452140  T
Q  140 taagtgtaga 149  Q
    ||||||||||    
T  5452139 taagtgtaga 5452130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 28529249 - 28529361
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtggttctat 135  Q
    |||| |||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || | |||| ||||| ||    
T  28529249 tgaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactgtgtg-ggttcaat 28529347  T
Q  136 tttctaagtgtaga 149  Q
    |||| |||||||||    
T  28529348 tttcaaagtgtaga 28529361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 20493624 - 20493551
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcc 114  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  20493624 aatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcc 20493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 26310609 - 26310516
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttctaagtgtaga 149  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||| || |||||| |||||| |||||||||    
T  26310609 acttttcaacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtaga 26310516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 37776887 - 37776773
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    |||| |||||| |||||||| ||||||||||||| |||| | ||||||||||||| || |||||||||||||||||||| | || ||||||| ||||| |    
T  37776887 tgaggaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaa 37776788  T
Q  135 ttttctaagtgtaga 149  Q
    ||||| |||||||||    
T  37776787 ttttcaaagtgtaga 37776773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 18427294 - 18427220
Alignment:
Q  76 aacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  18427294 aacactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtaga 18427220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 52124135 - 52124026
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt-gtggttctattttc 139  Q
    |||||| |||||||| |||||| ||| ||||||||| ||||||||  ||||||||||||||| |||||||||||||  ||||||| | ||||| ||||||    
T  52124135 aatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttcaattttc 52124036  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  52124035 aaagtgtaga 52124026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 27243047 - 27243134
Alignment:
Q  42 atgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||| ||||||||  ||||| ||||||||||||||||||||||||||| |||||| ||||||||| |||||||| || ||| |||||    
T  27243047 atgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgg 27243134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 41452067 - 41451965
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||||| ||||||||||||  ||||||  |||||||||||| |||||||||||||| |||||||||| || ||||||| ||||| |||||| ||| ||    
T  41452067 gcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagt 41451968  T
Q  147 aga 149  Q
    |||    
T  41451967 aga 41451965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 24734713 - 24734794
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||| ||||||||||||  ||||||  |||||||||||| |||||||||||||| |||||||||| || |||||||||    
T  24734713 gcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgg 24734794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 13809079 - 13809170
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||||| ||||||||  |||||  ||||||||||||||  |||||||||| |||||| |||||||||||||||||| |||||| |||||    
T  13809079 gagaaatgctagcaacactctcttttacacactctctctaact-tcactcttttattggataaaatcaatgtatgtcccaccattttatgtgg 13809170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 40716045 - 40715953
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||| | |||||||| |||||||||||||||||||| ||||||||||||| |  | |||||| |||||||| | ||||| |||||||||    
T  40716045 gagaaatgttagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgg 40715953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 46450063 - 46450176
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca-ttttgtgt-ggttct 133  Q
    |||| |||||| |||||||| |||||| ||||||||||  | ||||||||||||| || |||| ||||||||||||||||| || |||||||| ||||||    
T  46450063 tgaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttct 46450160  T
Q  134 attttctaagtgtaga 149  Q
    |||| | |||||||||    
T  46450161 atttgcaaagtgtaga 46450176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 46160950 - 46161058
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttc 139  Q
    |||||| |||||||| |||||| ||||||||||  | ||||||||||||| |||||||||||||||  |||||| | || |||||| ||||||||||| |    
T  46160950 aatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctatttcc 46161047  T
Q  140 taagtgtagat 150  Q
     ||||||||||    
T  46161048 aaagtgtagat 46161058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 45515658 - 45515596
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca 119  Q
    |||||| ||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||    
T  45515658 actttttaacactctctccaacactcactattttattggatgaaatcaatgtatatcccatca 45515596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 24748915 - 24748976
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    ||||||||  ||||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  24748915 gcaacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgta 24748976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 46237218 - 46237137
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||||||  ||||| | ||||||||||| || |||||||||| ||||||||||||||||||||||||| || ||| |||||    
T  46237218 gcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgg 46237137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 22604570 - 22604646
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg 126  Q
    |||||| |||||| || ||||||| |||||||||||| ||| |||||| |||| ||||||||||||| |||||||||    
T  22604570 aacacttactttttaatactctctttaacactcactcatttattggataaaattaatgtatgtcccaccattttgtg 22604646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 20791321 - 20791407
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtagat 150  Q
    ||||||||| || |||||||| |||| ||||||||||||||||||||||||| || ||| || | ||||||||| | ||||||||||    
T  20791321 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagat 20791407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 27068579 - 27068526
Alignment:
Q  158 aagggctgcggttatggtgtataaggaaatccttatgcaacataaccgcacccc 211  Q
    ||||||||||||||||||| |||||||  |||||||||| ||||||||||||||    
T  27068579 aagggctgcggttatggtgcataaggatttccttatgcaccataaccgcacccc 27068526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 50661694 - 50661613
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||||||  ||||| |||||||||||||||||| |||||||| || ||| ||||||||| |||||||| || ||| |||||    
T  50661694 gcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgg 50661613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 29389192 - 29389108
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt 125  Q
    |||||| |||||||| |||||| | ||||| || |||||||||||||||  ||| || |||||||||||||||||| || |||||    
T  29389192 aatgctagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccactttgt 29389108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 37600301 - 37600221
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||  ||||| | ||||||||||| ||| ||||||||| |||| |||||||||||||||||||| || ||| |||||    
T  37600301 caacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgg 37600221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 38928007 - 38928075
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| | |||| |||||||||||||||||||| |||| |||||||||||||    
T  38928007 aatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgta 38928075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 41707602 - 41707530
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| | |||||||||||||||||||||| |  |||||| ||||||||||||||  ||||| |||||||||    
T  41707602 acttttgagcactctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgg 41707530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 46575969 - 46576037
Alignment:
Q  61 ttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||||||||| |||||||||||| || |||| ||||| |||||||||||||| || ||| |||||    
T  46575969 ttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgg 46576037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 54141064 - 54140964
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgta 147  Q
    |||||||  ||||| | ||||||||||| ||||||||| ||| |||| |||||||||||||||||||| || |||  || ||||| |||||| |||||||    
T  54141064 caacactttcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttcaaagtgta 54140965  T
Q  148 g 148  Q
    |    
T  54140964 g 54140964  T

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Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 138793 - 138848
Alignment:
Q  70 ctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt 125  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||| || ||||||||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgtatgtctcaccattttgt 138848  T

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Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 14236044 - 14236139
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtagatacacgataa 159  Q
    ||||||||| || |||||||| |||| ||||||||||||||| ||||||||| || ||| || | ||||||||| | |||||||||| ||| ||||    
T  14236044 acactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataa 14236139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 24749072 - 24749001
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||| ||| |||||||||||||||| |||||| | || ||| |||||||||||||||| |||||| |||||    
T  24749072 cttttgaacgctctctctaacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgg 24749001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 27068530 - 27068573
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgcaacataaccgca 207  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||    
T  27068530 tgcggttatggtgcataaggaaatccttatgcaccataaccgca 27068573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 8825150 - 8825076
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcatttt 123  Q
    ||||||| ||||||||||  ||||||||  |||||| ||||| || |||||||||||| ||||||||| ||||||    
T  8825150 caacactcacttttcaaccatctctctagtactcacccttttattagatgaaatcaatatatgtcccaccatttt 8825076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 8036794 - 8036830
Alignment:
Q  160 gggctgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||| |||||||||||||||||||    
T  8036794 gggctgcggttatggtgcataaggaaatccttatgca 8036830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 10769909 - 10769829
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||| |||||| ||||||||  ||||| | ||||||||||| |||  |||||||| || | ||||||||||||||||||||    
T  10769909 tgaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtccca 10769829  T

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Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 49720171 - 49720099
Alignment:
Q  51 acactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcatttt 123  Q
    ||||| |||||||||||||||||| ||||||||||   || |||||| |||| ||||||| ||||| ||||||    
T  49720171 acactcacttttcaacactctctcaaacactcacttgcttattggattaaatgaatgtatatcccaccatttt 49720099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 54140891 - 54140959
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| | |||| |||||| ||||||||| ||| ||||||||||||||||||    
T  54140891 aatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgta 54140959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 29755496 - 29755611
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    |||| |||||| |||||||| ||||||||||| ||||| |||||| ||||||||| | | ||  ||||||| |||||  ||  | ||||||| ||||| |    
T  29755496 tgaggaatgctagcaacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaa 29755595  T
Q  135 ttttctaagtgtagat 150  Q
    ||||| ||||||||||    
T  29755596 ttttcaaagtgtagat 29755611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 43657150 - 43657067
Alignment:
Q  66 cactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtag 148  Q
    |||| |||||| |||||||| |||| || |||||||||||||||||||||| || ||| |||| |||| |||| | ||||||||    
T  43657150 cactttctctagcactcactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtag 43657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 50416475 - 50416510
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  50416475 ggctgcggttatggtgcataaggaaatccttatgca 50416510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 52951377 - 52951444
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgt 108  Q
    |||||| ||||||||  ||||| ||||||||||| || ||||||||| |  |||||||||||||||||    
T  52951377 aatgctagcaacactctctttttaacactctctcaaatactcactctatcattggatgaaatcaatgt 52951444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 55452156 - 55452085
Alignment:
Q  79 actcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    |||||||||||| ||||||| |||  |||||||||||| || ||||||| |||||||||| | |||||||||    
T  55452156 actcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagtgtaga 55452085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 13639426 - 13639464
Alignment:
Q  64 aacactctctctaacactcactcttttgttggatgaaat 102  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  13639426 aacactctctctaacagtcactcttttattggatgaaat 13639464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 15790532 - 15790466
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcatttt 123  Q
    ||||||||||||| | ||||||||| |||  ||| |||||| ||||||||||||||| || ||||||    
T  15790532 acttttcaacactttttctaacacttacttatttattggataaaatcaatgtatgtctcaccatttt 15790466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 42780681 - 42780739
Alignment:
Q  51 acactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||  |||||||||||||||||||| ||| || |||||||||||| |||||    
T  42780681 acactatctttctaacactctctctaacactcattctcttattggatgaaatccatgta 42780739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 46156783 - 46156741
Alignment:
Q  61 ttcaacactctctctaacactcactcttttgttggatgaaatc 103  Q
    ||||||||||||| |||||||||||||||| |||| |||||||    
T  46156783 ttcaacactctctttaacactcactcttttattgggtgaaatc 46156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 52951537 - 52951475
Alignment:
Q  43 tgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaa 105  Q
    |||| ||||||||  ||||| ||||||||||||| |||||||||| |  ||||||||||||||    
T  52951537 tgctagcaacactctctttttaacactctctctagcactcactctctcattggatgaaatcaa 52951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 55283237 - 55283167
Alignment:
Q  40 aaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtat 110  Q
    |||||||  ||||||| |||||| |||||||||| ||||||| | ||| || |||||| ||||||||||||    
T  55283237 aaatgctaacaacactcacttttaaacactctctttaacacttattctattattggataaaatcaatgtat 55283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 18722568 - 18722535
Alignment:
Q  92 ttggatgaaatcaatgtatgtcccatcattttgt 125  Q
    ||||||||||||||||||||||||| ||||||||    
T  18722568 ttggatgaaatcaatgtatgtcccaccattttgt 18722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 19012613 - 19012576
Alignment:
Q  159 agggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  19012613 agggctgcggttatggtgcataaggaaattcttatgca 19012576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 37600123 - 37600196
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||| |||||| ||||||||  ||||| | ||||||||||| ||| ||||||||| |||| |||| ||||||||    
T  37600123 tgaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgta 37600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 38414678 - 38414767
Alignment:
Q  71 tctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtagatacacgataa 159  Q
    ||||||||| ||||||| |  || ||| | |||||||||||||||| |||||||||| ||||  |||||  |||||||||| ||||||||    
T  38414678 tctctaacagtcactctctcattagataagatcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataa 38414767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 7640757 - 7640701
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcc 114  Q
    ||||||||||||| ||||||||||  || | || ||||||||||| |||||||||||    
T  7640757 cttttcaacactcactctaacacttgctttcttattggatgaaattaatgtatgtcc 7640701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 12974236 - 12974204
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  12974236 tgcggttatggtgcataaggaaatccttatgca 12974204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 30624634 - 30624703
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    |||||| |||||||| |||||| | ||||||  ||||||||||||||||| ||| || |||| |||||||||    
T  30624634 aatgctagcaacactcacttttgagcactct--ctaacactcactcttttattgaataaaattaatgtatgt 30624703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 36185951 - 36185919
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  36185951 tgcggttatggtgcataaggaaatccttatgca 36185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 50416610 - 50416578
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  50416610 tgcggttatggtgcataaggaaatccttatgca 50416578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 8108952 - 8109066
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttcta 134  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||  | |||||| | |||| |    
T  8108952 tgagaaatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaa 8109051  T
Q  135 ttttctaagtgtaga 149  Q
    ||||| |||||||||    
T  8109052 ttttcaaagtgtaga 8109066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 24834575 - 24834688
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctat 135  Q
    |||||||||| |||||||| ||||||  |||||||||||||| |||||  |||| ||||||| ||||||||||||||||| |||||||||| ||||| ||    
T  24834575 gagaaatgctagcaacactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaat 24834674  T
Q  136 tttctaagtgtaga 149  Q
    |||| |||||||||    
T  24834675 tttcaaagtgtaga 24834688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 43771134 - 43771236
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||||| |||||| |||||||||||||  |||||||||||| ||||||||||||||||||||||||| || | ||||| ||||| |||||| ||||||    
T  43771134 gcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgt 43771233  T
Q  147 aga 149  Q
    |||    
T  43771234 aga 43771236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 40991768 - 40991693
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||    
T  40991768 aatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtccca 40991693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 50571872 - 50571974
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgt 146  Q
    |||||| | |||||||||||||||||||| |||| |||||||| || ||||||||||||||||| ||||||| ||| ||||| ||| |||||| ||||||    
T  50571872 gcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaattttcaaagtgt 50571971  T
Q  147 aga 149  Q
    |||    
T  50571972 aga 50571974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 20454548 - 20454649
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttctaagtgt 146  Q
    |||||||| |||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||||   || |||||| |||||| |||||| ||||||    
T  20454548 gcaacacttacttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtcc--acactttgtgttggttcaattttcaaagtgt 20454645  T
Q  147 agat 150  Q
    ||||    
T  20454646 agat 20454649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 50164405 - 50164505
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt-gtggttctattttctaagtgtag 148  Q
    |||||| |||||| ||||||||||||| ||||||||| ||| |||||| |||||||||||| ||||| |||||||| | ||||| |||||| ||||||||    
T  50164405 aacactcactttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtag 50164504  T
Q  149 a 149  Q
    |    
T  50164505 a 50164505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 33653668 - 33653578
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtggtt 131  Q
    |||||| |||||||| | ||||||||||||||||||  | |||||| ||| || |||||||||||||||||||||| ||||||||| ||||    
T  33653668 aatgctagcaacactcagttttcaacactctctctattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtt 33653578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 39016660 - 39016746
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcatttt 123  Q
    |||||||||| |||||| |  ||||| |||||||||| ||||||| ||| |||| ||||||||||||||||||||||||| ||||||    
T  39016660 gagaaatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccatttt 39016746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 39471153 - 39471267
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttcta 134  Q
    |||| |||||| |||||||| |||||| || ||||||| ||||||  |||||||| || |||||||||||||||||||||| || |||||| |||||| |    
T  39471153 tgaggaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaa 39471252  T
Q  135 ttttctaagtgtaga 149  Q
    | ||| |||||||||    
T  39471253 tcttcaaagtgtaga 39471267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 49242180 - 49242281
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtag 148  Q
    |||||| |||||| |||||||| ||||||| ||||| |||  ||||||||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||    
T  49242180 aacactcacttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtag 49242279  T
Q  149 at 150  Q
    ||    
T  49242280 at 49242281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 754749 - 754673
Alignment:
Q  51 acactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt 127  Q
    ||||| ||||||||||||| ||||||||||||||| |||| ||||||||| |||| |||||||||| || |||||||    
T  754749 acacttacttttcaacactttctctaacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgt 754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 722177 - 722244
Alignment:
Q  60 tttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt 127  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||| |||||||||| || |||||||    
T  722177 tttcaacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgt 722244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 34129572 - 34129473
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgt 146  Q
    |||||| | ||||||||| |||||||||| ||||||||||| | |||||||| |||||||||| ||||| || |||||||| |||| |||||| ||||||    
T  34129572 gcaacattcacttttcaaaactctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgt 34129473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 37315558 - 37315636
Alignment:
Q  35 gtgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||||| ||||||||  ||||| | |||||||||||||||||||||||   |||| ||||||||||||||||||||    
T  37315558 gtgagaaatgctagcaacactctcttttgagcactctctctaacactcactctt---ttgggtgaaatcaatgtatgtccca 37315636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 50481709 - 50481610
Alignment:
Q  56 aacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgtagatacac 154  Q
    |||||||||||||||| | |  ||||||||||||| |||||||||||||| ||||||| || || ||||| ||| |||||||||| ||||||||| ||||    
T  50481709 aacttttcaacactctttttctcactcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacac 50481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 43958148 - 43958250
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtggttctatt 136  Q
    |||||||| | |||||||| | |||| |||| |||||||| || |||||||||| ||| ||  ||||||||||||||||| |||||| ||||| ||||||    
T  43958148 gagaaatgttagcaacactcagtttttaacattctctctagcattcactcttttattgaatagaatcaatgtatgtcccaccattttatgtggatctatt 43958247  T
Q  137 ttc 139  Q
    |||    
T  43958248 ttc 43958250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 47009208 - 47009304
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtagatacac 154  Q
    ||||||||||||| |||| ||||||||||||| |||||| |||| ||||| |||| || |  |||||||| |||| |||||| ||||||||||||||    
T  47009208 ttttcaacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatacac 47009304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 47237912 - 47237845
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||  ||||| ||||||||||||| || |||||||||| ||||||||||||||| |||||||||    
T  47237912 caacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtccca 47237845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 16178743 - 16178697
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16178743 caacactctctctaactctcactcttttattggatgaaatcaatgta 16178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 20225518 - 20225411
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| |||||||| |||||| ||||||||||  | ||||||||||||| ||||||| |||| ||| |||||||| || ||| ||| |||||||||| |    
T  20225518 aatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctatttcc 20225421  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  20225420 aaagtgtaga 20225411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 22592312 - 22592402
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattt 137  Q
    ||||| || |||||| |||| |||||||  ||||||||||||| ||||||||||| ||||| ||||||| || ||||||| ||||||||||    
T  22592312 gcaacgctcacttttgaacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgtgtaggttctattt 22592402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 21777000 - 21776951
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcc 114  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  21777000 acactctctctaacattcactcttttattggataaaatcaatgtatgtcc 21776951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 24938558 - 24938485
Alignment:
Q  77 acactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgtaga 149  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||| ||| ||| |||||  |||||||||    
T  24938558 acactcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtaga 24938485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 2088818 - 2088734
Alignment:
Q  67 actctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgtagat 150  Q
    |||||||||||||||||||||||  |||  |||||||||||||||||||| || ||| ||||| ||| |||| | ||||||||||    
T  2088818 actctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagtgtagat 2088734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 25719268 - 25719204
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||| || ||| |||||    
T  25719268 acactctctcaaacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgg 25719204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 24106809 - 24106750
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccat 117  Q
    ||||||||||||||||||||||| |||||| || ||||||||||  |||| |||||||||    
T  24106809 cttttcaacactctctctaacacccactctcttattggatgaaactaatgcatgtcccat 24106750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 27654495 - 27654553
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||||||||||||||||||| ||| || |||||| |||  |||||||||||||    
T  27654495 cttttcaacactctctctaacactcattctcttattggataaaactaatgtatgtccca 27654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 48339512 - 48339410
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||||| ||| || | |||||||| ||||||||||||| || |||||  |||||||||||||| ||| || ||||||| ||||| |||||| ||| ||    
T  48339512 gcaacactcactattgagcactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgt 48339413  T
Q  147 aga 149  Q
    |||    
T  48339412 aga 48339410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 29699522 - 29699587
Alignment:
Q  73 tctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattt 137  Q
    |||| ||||||||||||| |||||||||||||||  |||||||| || |||||| |||||||||||    
T  29699522 tctagcactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttctattt 29699587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 30867086 - 30867001
Alignment:
Q  66 cactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtagat 150  Q
    |||| |||||| |||||||| |||| |||||| |||| ||||||||||||| || ||| ||| ||||| |||||| ||||||||||    
T  30867086 cactatctctagcactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagat 30867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 42862575 - 42862494
Alignment:
Q  66 cactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||| |||||| |||||||| |||| |||| |||||||||||||||||||| || ||| ||| ||||| |||||| ||||||    
T  42862575 cactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgt 42862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 51206218 - 51206157
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    ||||||||  ||||| | ||||||||||| ||||||||||||| |||| |||||||||||||    
T  51206218 gcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 51206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 26361446 - 26361378
Alignment:
Q  82 cactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||| ||||||||| |||||||||| |||| |||||||||| ||||| || ||| |||||||||    
T  26361446 cactcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtaga 26361378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 33996106 - 33996042
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    |||||||  ||||||||||| |||||||||| |||||||||| ||  || |||||||||||||||    
T  33996106 caacactctcttttcaacacactctctaacattcactcttttattaaatcaaatcaatgtatgtc 33996042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 40812039 - 40812103
Alignment:
Q  42 atgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaat 106  Q
    ||||| ||||||||   |||| ||||||||||||| ||||||||||||| |||| ||||||||||    
T  40812039 atgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaat 40812103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 46242113 - 46242024
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    ||||||| |||||| ||||||||||  |||  |||| ||||| | ||||||||||| ||||||||||| |||||||||| ||||| ||||||    
T  46242113 caacactcactttttaacactctctagaac--tcacacttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttc 46242024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 53871042 - 53870998
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcact 85  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||    
T  53871042 aatgctagcaacactcactttccaacactctctctaacactcact 53870998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 6841816 - 6841851
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  6841816 ggctgcggttatggtgcataaggaaatccttatgca 6841851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 8165757 - 8165792
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  8165757 ggctgcggttatggtgcataaggaaatccttatgca 8165792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 10169825 - 10169737
Alignment:
Q  38 agaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg 128  Q
    |||||||||  ||||| | |||||||||||||||||  || | ||||||| || ||||||||||||||| ||||||| | || ||||||||    
T  10169825 agaaatgctaacaacattcacttttcaacactctct--aatattcactctattattggatgaaatcaatatatgtcctaccactttgtgtg 10169737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 148
Target Start/End: Original strand, 13069971 - 13070049
Alignment:
Q  70 ctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtag 148  Q
    ||||||| ||||||||||||| |||| |||||||||||||||| ||| || ||| ||| ||||| |||||| ||||||||    
T  13069971 ctctctagcactcactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccattttcaaagtgtag 13070049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 196
Target Start/End: Complemental strand, 21098177 - 21098146
Alignment:
Q  165 gcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||||||||||||||||||    
T  21098177 gcggttatggtgtataaggaaatccttatgca 21098146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 30779338 - 30779373
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  30779338 ggctgcggttatggtgcataaggaaatccttatgca 30779373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 33883289 - 33883324
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  33883289 ggctgcggttatggtgcataaggaaatccttatgca 33883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 43124654 - 43124607
Alignment:
Q  80 ctcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt 127  Q
    ||||||| |||  |||||||||||||||||||||||| ||||||||||    
T  43124654 ctcactcatttaatggatgaaatcaatgtatgtcccaccattttgtgt 43124607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 51206081 - 51206131
Alignment:
Q  78 cactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg 128  Q
    ||||||||| ||| || ||||||||||||||||||||||||| ||| ||||    
T  51206081 cactcactcatttattagatgaaatcaatgtatgtcccatcactttatgtg 51206131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 51904787 - 51904717
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca 119  Q
    |||| ||| |||||||||||||||| |  |||||| ||| || || ||||||||||||||||| |||||||    
T  51904787 caactctatcttttcaacactctctttgtcactcattctcttattagatgaaatcaatgtatgacccatca 51904717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 1492871 - 1492912
Alignment:
Q  171 atggtgtataaggaaatccttatgcaacataaccgcacccca 212  Q
    |||||| ||||||||||||||||||| |||||||||| ||||    
T  1492871 atggtgcataaggaaatccttatgcaccataaccgcagccca 1492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 17109714 - 17109747
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatg 194  Q
    |||||||||||||||| |||||||||||||||||    
T  17109714 ggctgcggttatggtgcataaggaaatccttatg 17109747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 196
Target Start/End: Original strand, 27865630 - 27865659
Alignment:
Q  167 ggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||||||||||||||||    
T  27865630 ggttatggtgtataaggaaatccttatgca 27865659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 50879473 - 50879554
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattt 137  Q
    |||||| |||||||| |||| ||||||||||||| ||| ||| |||  ||| |||||||| |||||| ||| ||||||||||    
T  50879473 acttttgaacactctttctagcactcactcttttattgaatggaattcatgcatgtcccaccattttatgtgggttctattt 50879554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 1492670 - 1492702
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  1492670 tgcggttatggtgcataaggaaatccttatgca 1492702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 2860916 - 2860988
Alignment:
Q  79 actcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgtagat 150  Q
    ||||||| |||||||||||||||| ||||||| | |||||  ||| ||||| ||| |||||| ||||||||||    
T  2860916 actcacttttttgttggatgaaattaatgtattttccatccctttctgtggattcaattttcaaagtgtagat 2860988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 12722735 - 12722767
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  12722735 tgcggttatggtgcataaggaaatccttatgca 12722767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 17109964 - 17109932
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  17109964 tgcggttatggtgcataaggaaatccttatgca 17109932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 21995668 - 21995700
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  21995668 tgcggttatggtgcataaggaaatccttatgca 21995700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 31763154 - 31763122
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  31763154 tgcggttatggtgcataaggaaatccttatgca 31763122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 36924239 - 36924271
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  36924239 tgcggttatggtgcataaggaaatccttatgca 36924271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 39016849 - 39016777
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||||| | ||||||||  ||||| ||||||||||||| |||| |||||||| || | | |||||||||||    
T  39016849 gagaaatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgta 39016777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 40615247 - 40615291
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatc 103  Q
    ||||||||||||||||||||| ||||| | || ||||||||||||    
T  40615247 ttttcaacactctctctaacattcactatcttattggatgaaatc 40615291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 44832496 - 44832552
Alignment:
Q  73 tctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||| |||||||| |||| |||| |||||| ||||||||||||| |||||| |||||    
T  44832496 tctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtgg 44832552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 52671869 - 52671913
Alignment:
Q  79 actcactcttttgttggatgaaatcaatgtatgtcccatcatttt 123  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||||||    
T  52671869 actcacttttttattggatgaaataaatgtatgtcccaccatttt 52671913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 9470078 - 9470191
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctat 135  Q
    |||||||||| |||| ||| | |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||| | ||||| ||    
T  9470078 gagaaatgctagcaatactcatttttcaacgctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaat 9470177  T
Q  136 tttctaagtgtaga 149  Q
    |||| |||||||||    
T  9470178 tttcaaagtgtaga 9470191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 45554568 - 45554643
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  45554568 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtccca 45554643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 12989187 - 12989301
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttcta 134  Q
    |||| |||||| |||||||| ||||||||||||||||| |  ||||||||||||  ||||||||||||||||||||||||| || ||||| ||| |||||    
T  12989187 tgaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattcta 12989286  T
Q  135 ttttctaagtgtaga 149  Q
    ||| | |||||||||    
T  12989287 tttccgaagtgtaga 12989301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 6980302 - 6980190
Alignment:
Q  38 agaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctatt 136  Q
    ||||||||| |||||| | |||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| | | || |||||||| |||| |||    
T  6980302 agaaatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaatt 6980203  T
Q  137 ttctaagtgtaga 149  Q
    ||| |||| ||||    
T  6980202 ttcaaagtataga 6980190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 3804585 - 3804659
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccc 115  Q
    |||||| || ||||| ||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  3804585 aatgctagctacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccc 3804659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 11539419 - 11539536
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatca--atgtatgtcccatcattttgtgtg-gttc 132  Q
    |||| ||||||  ||||||| | |||| |||||||| |||| ||||||||||||| |||||||||||||  |||||||| |||||| |||||||| ||||    
T  11539419 tgaggaatgctaacaacactcatttttgaacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttc 11539518  T
Q  133 tattttctaagtgtagat 150  Q
    ||||||| ||||||||||    
T  11539519 tattttcaaagtgtagat 11539536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 18511393 - 18511283
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    |||| |||||| |||||||| |||||| ||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||  ||||| ||| ||||| |    
T  18511393 tgaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaa 18511294  T
Q  135 ttttctaagtg 145  Q
    ||||| |||||    
T  18511293 ttttcaaagtg 18511283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 26767945 - 26767855
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg 126  Q
    |||| |||||| |||||||| ||||||||||| |||||||| |||| ||||||||  |||||||||||||||||||||||| || ||||||    
T  26767945 tgaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtg 26767855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 15508922 - 15509025
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    ||||||||  ||||| |||||||| |||||||||||||||||| |||  |||||||||||||||||||| |||||| ||| ||||| |||| | ||||||    
T  15508922 gcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccatttccaaagtgt 15509021  T
Q  147 agat 150  Q
    ||||    
T  15509022 agat 15509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 44274232 - 44274345
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctat 135  Q
    |||||||||| |||||||| |||||  | |||||||||||||| |||||||||  |||||| |||||||||||||||||| || ||||||| ||||| |     
T  44274232 gagaaatgctagcaacactcactttg-agcactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaac 44274330  T
Q  136 tttctaagtgtagat 150  Q
    |||| ||||||||||    
T  44274331 tttcaaagtgtagat 44274345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 42182890 - 42182978
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| ||||||||  ||||| | ||||||||||| ||||||||||||| |||| |||||||||||||||||||| || ||| |||||    
T  42182890 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgg 42182978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 24497201 - 24497302
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgta 147  Q
    ||||||| |||||| | |||||||| ||||| || || |||| ||||||||||  ||||||||| |||||||||||||||| || ||||||| |||||||    
T  24497201 caacactcacttttgaccactctctttaacagtcgcttttttattggatgaaactaatgtatgttccatcattttgtgtggattttattttcaaagtgta 24497300  T
Q  148 ga 149  Q
    ||    
T  24497301 ga 24497302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 28898221 - 28898128
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||| |||||| ||||||||   |||| | ||||||||||| ||||||||||||| |||| |||||||||||||||||||| || ||| |||||    
T  28898221 tgaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgg 28898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 30718497 - 30718397
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgta 147  Q
    ||||||| | |||| |||| ||||||||  |||||||||||| |||||||||||| || ||||| |||||||||||||||| || ||||||| |||||||    
T  30718497 caacactcaattttaaacattctctctagtactcactcttttattggatgaaatcgatatatgt-ccatcattttgtgtggattgtattttcaaagtgta 30718399  T
Q  148 ga 149  Q
    ||    
T  30718398 ga 30718397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 38464180 - 38464273
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||||||||||| ||| | ||| |||| ||| |||||||||||||||||| ||||| |||| || ||||| |||||| |||||||||    
T  38464180 acttttcaacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtaga 38464273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 25666764 - 25666700
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    ||||||| | |||||||||||||||| |||| |||||||||| | ||||||||||||||||||||    
T  25666764 caacactcatttttcaacactctctcaaacattcactcttttatcggatgaaatcaatgtatgtc 25666700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 8009521 - 8009604
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtggtt 131  Q
    ||||||||  ||||| |||||||| ||||||||||||| |||||||||||||||||||  |||||| || || ||| |||||||    
T  8009521 gcaacactctcttttgaacactctttctaacactcacttttttgttggatgaaatcaacatatgtctcaccactttatgtggtt 8009604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 36472008 - 36471945
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    |||||| ||||||||||||||||||| ||||||| ||| || |||||||||||||| |||||||    
T  36472008 aacactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtc 36471945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 16719610 - 16719528
Alignment:
Q  40 aaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattt 122  Q
    ||||||| |||||||| ||||||||||||| ||| || |||  |||||||| || |||||||||||||||| ||||| |||||    
T  16719610 aaatgctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccattt 16719528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 34142311 - 34142209
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||||| ||||||||||| |||||| |||| ||||| |||| |||||||||||  ||||||||| ||  | ||||||| ||||| |||||| ||||||    
T  34142311 gcaacacttacttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagtgt 34142212  T
Q  147 aga 149  Q
    |||    
T  34142211 aga 34142209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 37228494 - 37228588
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatg-aaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||||||||| ||||||||  ||||| | ||||||||||| ||||||||||||| |||| || |||| ||||||||||||| || ||| |||||    
T  37228494 tgagaaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgg 37228588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 10981535 - 10981616
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattt 137  Q
    |||||| |||||||||||||||||||||| || | ||| ||||||  ||||||||||||| || ||||||| ||||||||||    
T  10981535 acttttgaacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctattt 10981616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 1107046 - 1107114
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||||||  ||||| | ||||||||||| ||| ||||||||| |||| ||||||||||||||||||||    
T  1107046 gcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtccca 1107114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 1110227 - 1110287
Alignment:
Q  69 tctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||| || ||| |||||    
T  1110227 tctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgg 1110287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 42579814 - 42579758
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca 119  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||| || |||||    
T  42579814 caacactctctcaaacactcactcttttattggatgaaatcaatatatatctcatca 42579758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 4603049 - 4602962
Alignment:
Q  38 agaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt 125  Q
    ||||||| | |||||||| |||||||||| ||| || |   |||||||||||| ||||||||||||||| ||||| |||||| |||||    
T  4603049 agaaatgttagcaacactcacttttcaacgctccctttggtactcactcttttattggatgaaatcaatatatgttccatcactttgt 4602962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 22596299 - 22596334
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||||||||||||||||||||||    
T  22596299 ggctgcggttatggtgtataaggaaatccttatgca 22596334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 41805931 - 41805880
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||| ||| |||||||||||||||| |||||| ||||||||||||||||||    
T  41805931 acactttctttaacactcactcttttattggataaaatcaatgtatgtccca 41805880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 43404461 - 43404414
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  43404461 acactctctttaacactcacttttttgttggataaaatcaatgtatgt 43404414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 2122797 - 2122867
Alignment:
Q  42 atgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    ||||| |||||||| ||||||||| ||| |||||| || |||||||||  | |||||||||||||||||||    
T  2122797 atgctagcaacactcacttttcaatactttctctatcaatcactctttcataggatgaaatcaatgtatgt 2122867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 4964826 - 4964764
Alignment:
Q  67 actctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||||| |||||||| |||| |||| |||||||||||||||||||| || ||| |||||    
T  4964826 actctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgg 4964764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 31494211 - 31494282
Alignment:
Q  43 tgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||| ||||||||  ||||||||||||||  |||||||||||||| || ||||||||||  |||||||||||||    
T  31494211 tgctagcaacactctcttttcaacactct--ctaacactcactctcttattggatgaaaataatgtatgtccca 31494282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 43400151 - 43400209
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||||||||||||||||||||| | || ||||||||||  | |||||||||||    
T  43400151 cttttcaacactctctctaacactcactttcttattggatgaaactagtgtatgtccca 43400209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 11729775 - 11729715
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgt 108  Q
    |||||||| ||||||||||||||| ||||||| | | |||||| ||| |||||||||||||    
T  11729775 gcaacactcacttttcaacactctttctaacatttattcttttattgaatgaaatcaatgt 11729715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 17188076 - 17188133
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgt 108  Q
    ||||||| ||||||||||  |||||||| |||||||| |||| |||||||||||||||||    
T  17188076 caacactcacttttcaac--tctctctatcactcactattttattggatgaaatcaatgt 17188133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 28898035 - 28898103
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| |  ||||||| || ||||||||||||| ||||||||||||||||||    
T  28898035 aatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 37719835 - 37719903
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| |||||| |  ||||| | |||||| |||| ||||||||||||| ||||||||||||||||||    
T  37719835 aatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 12449049 - 12449084
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  12449049 ggctgcggttatggtgcataaggaaatccttatgca 12449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 31395617 - 31395550
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccc 115  Q
    ||||||||  ||||| | |||||||| || ||||||||| ||| |||| |||||||||||||||||||    
T  31395617 gcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccc 31395550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 33678299 - 33678224
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatg 111  Q
    |||| |||||| |||||||| |||||| |||||||| | ||||||| | |||||  ||| ||||||||||||||||    
T  33678299 tgaggaatgctagcaacactcacttttgaacactctttataacacttattctttaattgaatgaaatcaatgtatg 33678224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 41546211 - 41546133
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccc 115  Q
    |||| |||||| ||| ||||  ||||||||||||||||| |||| ||||||| || ||||||| ||||||| ||||||||    
T  41546211 tgaggaatgctagcatcactctcttttcaacactctctcaaacattcactctcttattggatg-aatcaatatatgtccc 41546133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 4964669 - 4964739
Alignment:
Q  39 gaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||||| |||| |||  ||||| || |||||||||| ||||||||||||| |||||| | |||||||||    
T  4964669 gaaatgctagcaatactctcttttgaatactctctctagcactcactcttttattggataagatcaatgta 4964739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 17505979 - 17505921
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgt 108  Q
    ||||||| ||||||||||||||||| |||||||| ||| |  ||| |||||||||||||    
T  17505979 aacactatcttttcaacactctctcaaacactcattctctaattgaatgaaatcaatgt 17505921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 19246874 - 19246908
Alignment:
Q  173 ggtgtataaggaaatccttatgcaacataaccgca 207  Q
    |||||||||||||||||||||||| ||||||||||    
T  19246874 ggtgtataaggaaatccttatgcaccataaccgca 19246908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 19639110 - 19639172
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca 119  Q
    |||||| ||||||||||| | || ||||| |||| || ||||||||||||||||||| |||||    
T  19639110 actttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatca 19639172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 19837703 - 19837765
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca 119  Q
    |||||| ||||||||||| | || ||||| |||| || ||||||||||||||||||| |||||    
T  19837703 actttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatca 19837765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 25730602 - 25730520
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctatttt 138  Q
    |||||| |||||||| ||||||||||||| |||| ||||||| |||  ||||||||| || ||| || ||| |||||||||||    
T  25730602 acttttgaacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctatttt 25730520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 37077978 - 37078036
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||||| |||||||||| |||||| || ||||||| ||| | |||||||||||    
T  37077978 cttttcaacactttctctaacacacactctcttattggatgtaattagtgtatgtccca 37078036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 19193496 - 19193545
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcact 85  Q
    |||| |||||| ||||||||  ||||||||||||||||| ||||||||||    
T  19193496 tgaggaatgctagcaacactctcttttcaacactctctccaacactcact 19193545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 20661393 - 20661426
Alignment:
Q  163 ctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||| |||||||||||||||||||    
T  20661393 ctgcggttatggtgcataaggaaatccttatgca 20661426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 27968915 - 27968980
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaat 102  Q
    |||||||||| ||||||||  ||||| |  |||||||||| ||||||||||||| |||| ||||||    
T  27968915 gagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 28091672 - 28091607
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaat 102  Q
    |||||||||| ||||||||  ||||| |  |||||||||| ||||||||||||| |||| ||||||    
T  28091672 gagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 28101904 - 28101839
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaat 102  Q
    |||||||||| ||||||||  ||||| |  |||||||||| ||||||||||||| |||| ||||||    
T  28101904 gagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 15253066 - 15253034
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||||| ||||||||||||||    
T  15253066 tgcggttatggtgtataacgaaatccttatgca 15253034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 24183643 - 24183611
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  24183643 tgcggttatggtgcataaggaaatccttatgca 24183611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 25575321 - 25575353
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  25575321 tgcggttatggtgcataaggaaatccttatgca 25575353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 29795813 - 29795877
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    |||||||| ||||||| ||||| ||| || |||||| |||||| | | |||||||||||||||||    
T  29795813 gcaacacttacttttctacactttctttatcactcattcttttatcgaatgaaatcaatgtatgt 29795877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 30706449 - 30706397
Alignment:
Q  43 tgctggcaacactaacttttcaacactctctctaacactcactcttttgttgg 95  Q
    |||| ||||||||  ||||||||||||||||| |||||||||| | |||||||    
T  30706449 tgctagcaacactctcttttcaacactctctcaaacactcactttattgttgg 30706397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 31783791 - 31783823
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  31783791 tgcggttatggtgcataaggaaatccttatgca 31783823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 31784031 - 31783999
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  31784031 tgcggttatggtgcataaggaaatccttatgca 31783999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 40535174 - 40535098
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    |||| ||||||  |||||||| ||||  | ||| ||||||||||||||||||||| |||| | |||||||| |||||    
T  40535174 tgaggaatgctaacaacactatctttcgagcaccctctctaacactcactcttttattgggtaaaatcaatatatgt 40535098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 7e-26; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 32072095 - 32072207
Alignment:
Q  38 agaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctatt 136  Q
    ||||||||| |||||| | |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| || ||||||| ||||| |||    
T  32072095 agaaatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatt 32072194  T
Q  137 ttctaagtgtaga 149  Q
    ||  |||||||||    
T  32072195 tttaaagtgtaga 32072207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 1977352 - 1977242
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| |||| ||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||| | || ||||||| ||||| ||||||    
T  1977352 aatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaattttc 1977253  T
Q  140 taagtgtagat 150  Q
     ||||||||||    
T  1977252 aaagtgtagat 1977242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 9952941 - 9952829
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttcta 134  Q
    ||||||||||| | |||| | |||||||||||||||||||| |||||| | |||| |||||||||||||||| |||||||| || |||||||| |||| |    
T  9952941 tgagaaatgctagtaacatttacttttcaacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaa 9952842  T
Q  135 ttttctaagtgta 147  Q
    ||||| |||||||    
T  9952841 ttttcaaagtgta 9952829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 28414040 - 28413939
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgta 147  Q
    ||||||| |||||||||||||||||||| | |||||| |||| || |||||||||||||||||||||| || |||||||| |||| |||||| |||| ||    
T  28414040 caacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtata 28413941  T
Q  148 ga 149  Q
    ||    
T  28413940 ga 28413939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 17499390 - 17499302
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttctaagtgtagat 150  Q
    |||||||||||||| |||||  |||||| ||||||||||||||| ||||||||| ||||||||| |||||| |||||| ||||||||||    
T  17499390 caacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagat 17499302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 5979881 - 5979987
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| |||||||| ||||||||||||||||||||  |  ||||||| | |||||||| |||||||||||||||| || ||||||| ||||| ||||||    
T  5979881 aatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttc 5979980  T
Q  140 taagtgt 146  Q
     ||||||    
T  5979981 aaagtgt 5979987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 8903860 - 8903962
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||||| | ||||||||||||||||||  |||||||  ||| || |||||||||||||||||||||| || ||||||| ||||| |||||| ||||||    
T  8903860 gcaacactcatttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgt 8903959  T
Q  147 aga 149  Q
    |||    
T  8903960 aga 8903962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 6387560 - 6387650
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||||| ||||||||  |||||  |||||||  ||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||    
T  6387560 gagaaatgctagcaacactctcttttggacactct--ctaacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgg 6387650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 8914772 - 8914881
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| |||||||| |||||| | | ||||||||||||||||||||||  |||||| ||| |||||||||||||| || ||||||| |||||  |||||    
T  8914772 aatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatttttc 8914871  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  8914872 aaagtgtaga 8914881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 16983395 - 16983504
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt-gtggttctattttc 139  Q
    |||||| |||||||| ||||||||||||||| |||| ||||||||  ||| |||||| |||||| | |||||||||||| ||||| | ||||| ||||||    
T  16983395 aatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaattttc 16983494  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  16983495 aaagtgtaga 16983504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 34861348 - 34861262
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagt 144  Q
    |||||||||||||||||  | ||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||| |||||| ||||    
T  34861348 acttttcaacactctct--agcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattttcaaagt 34861262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 41727426 - 41727506
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||| ||||||| ||||||| |||||| |||||||||| || || ||||||||||||| ||| ||||||||||||||||||    
T  41727426 tgaggaatgctgacaacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtccca 41727506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 13407479 - 13407396
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgta 147  Q
    ||||||||||||||||| ||| |||| |||||| |||||||||||||||||| ||||||  || |||||||||||| |||||||    
T  13407479 acactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgta 13407396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 35151901 - 35151823
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg 126  Q
    |||||||| |||||| |||||||| | || || | |||||||| ||||||||||||||||||||||||| |||||||||    
T  35151901 gcaacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgtg 35151823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 35689506 - 35689588
Alignment:
Q  66 cactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgta 147  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||||||| || ||| |||| |||| |||||| |||||||    
T  35689506 cactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgta 35689588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 31301153 - 31301226
Alignment:
Q  78 cactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtagat 150  Q
    ||||||||||||| ||||||||||||||||||||| ||| || |||||||| ||||||||||| | ||||||||    
T  31301153 cactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtagat 31301226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 11962850 - 11962750
Alignment:
Q  51 acactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||| |||||||||||| |||| ||| |||||||||||| ||| || ||||||| |||| ||||| |||||| ||| ||||| |||||| |||||||||    
T  11962850 acactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagtgtaga 11962751  T
Q  150 t 150  Q
    |    
T  11962750 t 11962750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 13856558 - 13856506
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  13856558 acttctcaacactctctctaacacccactcttttattggatgaaatcaatgta 13856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 23685132 - 23685242
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttc 139  Q
    |||||| |||||| | ||||||  |||||||||  | |||||||| |||| ||||||||||||||||||||||||| || ||| || | ||||||||| |    
T  23685132 aatgctagcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttcc 23685231  T
Q  140 taagtgtagat 150  Q
     ||||||||||    
T  23685232 aaagtgtagat 23685242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 24056097 - 24055995
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||||| |||||||||| |||||| || ||||| ||||||| |  |||||||| ||||||||||||| || |||||||  |||| |||||| ||||||    
T  24056097 gcaacactcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtgt 24055998  T
Q  147 aga 149  Q
    |||    
T  24055997 aga 24055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 36804996 - 36804930
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||||||||||||| ||| ||| | || ||||||| ||||||||||||||||| ||||||||||||    
T  36804996 caacactctctctaatactaactatattattggatggaatcaatgtatgtcccaccattttgtgtgg 36804930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 16441969 - 16441908
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca 119  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||||||||||  |||||||||    
T  16441969 cttttcaacactatctataacactcactcttttactggatgaaatcaatgtgggtcccatca 16441908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 12212130 - 12212190
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgt 108  Q
    ||||||||  |||||||||| ||||||||||| |||||||||| |||| ||||||||||||    
T  12212130 gcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaatgt 12212190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 12456558 - 12456618
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgt 108  Q
    ||||||||  |||||||||| ||||||||||| |||||||||| |||| ||||||||||||    
T  12456558 gcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaatgt 12456618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 44709296 - 44709348
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccat 117  Q
    |||||||||||||||||||||||||| |||  ||||||||||||| |||||||    
T  44709296 acactctctctaacactcactcttttattgtgtgaaatcaatgtaggtcccat 44709348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 7599583 - 7599513
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||| ||||||||||||| |||  |||||||| ||||||||||||||||||| ||||| || ||| |||||    
T  7599583 ttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgg 7599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 17741655 - 17741597
Alignment:
Q  92 ttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtaga 149  Q
    ||||||||||||||||||||||||| ||||||||| | |||| |||||| |||||||||    
T  17741655 ttggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtaga 17741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 43506539 - 43506645
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| |||||||| |||||| ||||||||||  |||||||||| |||| ||||||  ||||||||||||| ||| || ||||||| ||||||| ||||    
T  43506539 aatgctagcaacactcacttttgaacactctct--aacactcact-ttttattggatataatcaatgtatgttccaccactttgtgtgggttctactttc 43506635  T
Q  140 taagtgtaga 149  Q
     | |||||||    
T  43506636 aatgtgtaga 43506645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 31691690 - 31691625
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaat 106  Q
    |||||| |||||||| |||||| || ||||||| |||||||||||||||| ||| | |||||||||    
T  31691690 aatgctagcaacactcacttttgaaaactctctttaacactcactcttttattgaacgaaatcaat 31691625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 186127 - 186095
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||||||||||||||||||||    
T  186127 tgcggttatggtgtataaggaaatccttatgca 186095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 13214542 - 13214605
Alignment:
Q  87 ttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    |||| ||||||| ||| |||||||||||||||||||||||| | ||| |||||| |||||||||    
T  13214542 ttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtaga 13214605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Complemental strand, 15809889 - 15809854
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  15809889 ggctgcggttatggtgcataaggaaatccttatgca 15809854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Complemental strand, 35448659 - 35448624
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  35448659 ggctgcggttatggtgcataaggaaatccttatgca 35448624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 17716862 - 17716961
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgta 147  Q
    ||||||| |||||||| |||||| |  |||||||||  |||| ||||||||||||||| |||||||||  ||||| ||| ||||  |||||| |||||||    
T  17716862 caacactcacttttcatcactcttt--aacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgta 17716959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 45218667 - 45218621
Alignment:
Q  70 ctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||||||||||| ||||||| ||||||||||||||||  |||||||    
T  45218667 ctctctaacactcgctcttttattggatgaaatcaatgcgtgtccca 45218621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 45246459 - 45246545
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtagat 150  Q
    ||||||||| || |||||||| |||| |||||| ||||||||||||||| || || ||| || | ||||||||| | ||||||||||    
T  45246459 acactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagat 45246545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 16314436 - 16314383
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    |||| |||| ||||||| |||||||||||||| |||||| |||| |||||||||    
T  16314436 ttttaaacattctctcttacactcactcttttattggataaaattaatgtatgt 16314383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 16441828 - 16441873
Alignment:
Q  64 aacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    ||||||||||||||||||||||||||| |||  ||||||| |||||    
T  16441828 aacactctctctaacactcactcttttattgagtgaaatctatgta 16441873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 24184385 - 24184446
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca 119  Q
    |||||||||||||| | ||| || ||||||||| ||||| ||||| |||| |||||||||||    
T  24184385 cttttcaacactctttttaatacgcactcttttattggaagaaattaatgcatgtcccatca 24184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 196
Target Start/End: Complemental strand, 41451278 - 41451249
Alignment:
Q  167 ggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||||||||||||||||    
T  41451278 ggttatggtgtataaggaaatccttatgca 41451249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 17656616 - 17656648
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  17656616 tgcggttatggtgcataaggaaatccttatgca 17656648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 17792938 - 17792906
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  17792938 tgcggttatggtgcataaggaaatccttatgca 17792906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 23567484 - 23567516
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  23567484 tgcggttatggtgcataaggaaatccttatgca 23567516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 26980433 - 26980354
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg 128  Q
    ||||||| ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  26980433 caacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtg 26980354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 6133803 - 6133715
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| |||||||| ||||||||||| |||||||| ||||||| ||||| ||||||||||||||| ||||||||| ||| ||||||||    
T  6133803 aatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgg 6133715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 41095792 - 41095680
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctat 135  Q
    |||||||||| ||||||||  ||||| | ||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||| | ||||| ||||| ||    
T  41095792 gagaaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccat 41095693  T
Q  136 tttctaagtgtag 148  Q
    |||| ||||||||    
T  41095692 tttcaaagtgtag 41095680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 25543341 - 25543427
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt 127  Q
    |||||| |||||||| |||||| |||||||||||||||||| |||||||| || |||||||||||| ||||||||| || |||||||    
T  25543341 aatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtgt 25543427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 931375 - 931463
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| |||||||| |||||||||| || ||||||| |||||||||||| ||| ||| || ||||||||||||||||||||| |||||    
T  931375 aatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgg 931463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 41958081 - 41958193
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt-gtggttcta 134  Q
    |||| |||||| | |||||| ||||||||||||||||   | ||||||||| ||| ||||||||||||||||||||||||| |||||||| | ||||| |    
T  41958081 tgaggaatgctagtaacactcacttttcaacactctca--agcactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaa 41958178  T
Q  135 ttttctaagtgtaga 149  Q
    ||||| |||||||||    
T  41958179 ttttcaaagtgtaga 41958193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 19101780 - 19101670
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttc 139  Q
    |||||| |||||| | ||||||  ||||||||| || |||||||| |||| ||||||||||||||||||||||||| || ||| || | |||||||||||    
T  19101780 aatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttc 19101681  T
Q  140 taagtgtagat 150  Q
     ||||||||||    
T  19101680 aaagtgtagat 19101670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 28218220 - 28218118
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgt 146  Q
    |||||||| | |||||||| |||||| || || |||||||||| |||||||||||||||||||||| || || ||||||||| ||| |||||| ||||||    
T  28218220 gcaacactcatttttcaaccctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgt 28218121  T
Q  147 aga 149  Q
    |||    
T  28218120 aga 28218118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 32848767 - 32848654
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttcta 134  Q
    |||| ||||||  |||||||  ||||| ||||||||||||| ||||||||||||| |||| |||||||| ||||||||||| || ||| ||||| ||| |    
T  32848767 tgaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattcca 32848668  T
Q  135 ttttctaagtgtag 148  Q
    ||||| ||||||||    
T  32848667 ttttcaaagtgtag 32848654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 18157034 - 18157114
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||||||||| |  |||||  ||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||||    
T  18157034 tgagaaatgctagggacactctcttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtccca 18157114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 41917996 - 41918104
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttc 139  Q
    |||||| ||||||||  ||||| | ||| ||||||| ||||||||||||| |||| |||||||||||||||||||| || ||| ||||| ||| ||||||    
T  41917996 aatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttc 41918095  T
Q  140 taagtgtag 148  Q
     ||||||||    
T  41918096 aaagtgtag 41918104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 10659941 - 10659838
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcac-tcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtg 145  Q
    |||||||| ||||||||| |||||||||||||||||| | |||| | |||||||||||||| |||||| | || ||||||| ||||| |||||| |||||    
T  10659941 gcaacactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtg 10659842  T
Q  146 taga 149  Q
    ||||    
T  10659841 taga 10659838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 29673498 - 29673585
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||||||||||||| | |||| |||||| |||||||| ||||||||| |||||||||| | ||| |||||| |||||||||    
T  29673498 caacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtaga 29673585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 22540369 - 22540479
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttc 139  Q
    |||||| |||||| | ||||||  ||||||||| || |||||||| |||| ||||||||||||||||||||||||| || ||| || | ||||||||| |    
T  22540369 aatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttcc 22540468  T
Q  140 taagtgtagat 150  Q
     ||||||||||    
T  22540469 aaagtgtagat 22540479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 2225227 - 2225313
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| | |||||| | |||||||||||||||  | ||| ||||||||| ||||||||||||||||||||||||| || |||||||||    
T  2225227 aatgctagtaacactcaattttcaacactctct--agcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgg 2225313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 11135735 - 11135828
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||| |||||| ||||||||  ||||| | ||||||||||| |||||||| |||| |||| |||||||||||||||||||| || ||| |||||    
T  11135735 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgg 11135828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 28274804 - 28274865
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatca 119  Q
    |||||||||||||||||||||||||||||| || ||||||||||  | ||||||||||||||    
T  28274804 cttttcaacactctctctaacactcactctcttattggatgaaactagtgtatgtcccatca 28274865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 13388335 - 13388403
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| || ||||||||||||||||||| |||| ||||||||||||||||||    
T  13388335 aatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgta 13388403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 39039534 - 39039470
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaa 105  Q
    |||||| |||||||| ||||||||||||||| | || ||||||||||||| ||||||||||||||    
T  39039534 aatgctagcaacactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 13114853 - 13114774
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||| || |||||  |||||  |||||||||||||||||||||||||| || ||| |||||||| |||||||||    
T  13114853 gagaaatgctagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaatatatgtccca 13114774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 4578752 - 4578681
Alignment:
Q  43 tgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||| ||||||||  ||||||||||||||||  ||||||||||||||| |||| ||||||||||||| ||||||    
T  4578752 tgctagcaacactctcttttcaacactctct--aacactcactcttttattgggtgaaatcaatgtaggtccca 4578681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 36566925 - 36567007
Alignment:
Q  69 tctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtagat 150  Q
    ||||| ||||||| ||| |||| |||||||||||||||||||||| ||||| ||| | | |||||||||||| ||||||||||    
T  36566925 tctctttaacacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgtagat 36567007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 3872812 - 3872704
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||| | ||  || |||||||| |||||| || || ||||||| ||||| |||| |    
T  3872812 aatgctagcaacactcacttttcaacactctctctagcactcactcttctattaaat-aaatcaatatatgtcacaccactttgtgtaggttcaatttcc 3872714  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  3872713 aaagtgtaga 3872704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 11430437 - 11430530
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||| ||||||  |||||||  ||||| | |||||| |||| ||||||||||||| |||| |||||||||||||||||||| || ||| |||||    
T  11430437 tgaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgg 11430530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 33193067 - 33193160
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttctaagtgtaga 149  Q
    |||||| |||| ||||| ||| |||||||  ||| ||||||||||||||||||||| ||| |||||||||  ||||| |||||| |||||||||    
T  33193067 actttttaacattctctataatactcacttatttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtaga 33193160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 44271935 - 44272028
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    |||||| |||||||||| || |||| ||| |||| ||| ||||||||||||||||| ||| |||||| ||| ||||| |||||| |||||||||    
T  44271935 acttttaaacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaattttcaaagtgtaga 44272028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 44739126 - 44739227
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgt 146  Q
    ||||||||  ||||| ||||||||||||| ||||||||||||| |||  |||||| ||||||||||||| || ||| |||| ||| ||||| | ||||||    
T  44739126 gcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagttgtatttccaaagtgt 44739225  T
Q  147 ag 148  Q
    ||    
T  44739226 ag 44739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 52158671 - 52158720
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatg 107  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  52158671 cttttcaacgctctctctaacacccactctcttgttggatgaaatcaatg 52158720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 14094180 - 14094092
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| || ||| || ||||| ||||||||||| | |||||||| |||| |||| |||||||||||||||||||| || ||| |||||    
T  14094180 aatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgg 14094092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 15523235 - 15523286
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||||||| || |||||||| |||| |||||||||||||||||||||||||    
T  15523235 acactctctttagcactcactattttattggatgaaatcaatgtatgtccca 15523286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 15531229 - 15531280
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||||||| || |||||||| |||| |||||||||||||||||||||||||    
T  15531229 acactctctttagcactcactattttattggatgaaatcaatgtatgtccca 15531280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 32211941 - 32211890
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcc 114  Q
    |||||||||||| | ||||||||||||| || ||||||||||||||||||||    
T  32211941 caacactctctccagcactcactcttttattagatgaaatcaatgtatgtcc 32211890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 14341083 - 14341025
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||||||||||||||||||| | |||| ||||||||||  ||| |||||||||    
T  14341083 cttttcaacactctctctaacactcatttttttattggatgaaactaatatatgtccca 14341025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 15928579 - 15928665
Alignment:
Q  64 aacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtaga 149  Q
    ||||||||||||| ||| ||||||||| || |||| |||  ||||||||| || ||||||||||| ||||||||||| | |||||||    
T  15928579 aacactctctctagcacccactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtaga 15928665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 50539160 - 50539234
Alignment:
Q  76 aacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||||||| |||||||||||||| |||||| ||| || ||| ||| ||||| ||||||| ||||||||    
T  50539160 aacactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtaga 50539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 11987635 - 11987736
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttctaagtgta 147  Q
    ||||||| |||||||||||||||||| |||| | | || ||| ||||||||||| ||||||||| ||| || || |||  ||||| |||||| |||||||    
T  11987635 caacactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaattttcaaagtgta 11987734  T
Q  148 ga 149  Q
    ||    
T  11987735 ga 11987736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 50773263 - 50773202
Alignment:
Q  68 ctctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||| ||| || ||| |||||    
T  50773263 ctctctctaacactcactcttttattggataaaatcaatatatgttccaccactttatgtgg 50773202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 148
Target Start/End: Original strand, 8899011 - 8899123
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctat 135  Q
    |||||||| | |||||||| ||||||||||| || ||||||||||  || |||  || |||||||| || |||||||||| |  ||||||| ||||| ||    
T  8899011 gagaaatgttagcaacactcacttttcaacattccctctaacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggttcaat 8899110  T
Q  136 tttctaagtgtag 148  Q
    |||| ||||||||    
T  8899111 tttcaaagtgtag 8899123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 33156982 - 33157022
Alignment:
Q  156 ataagggctgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  33156982 ataaggggtgcggttatggtgcataaggaaatccttatgca 33157022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 37553110 - 37553018
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtagat 150  Q
    |||| ||||||||||||| |||| ||| | || ||||||||||| ||||| |||||||||| |||  || |||| ||||||| ||||||||||    
T  37553110 ttttgaacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagat 37553018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 10974628 - 10974663
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  10974628 ggctgcggttatggtgcataaggaaatccttatgca 10974663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 11135920 - 11135853
Alignment:
Q  42 atgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    ||||| ||||||||  ||||| |  |||||||||| ||||||||||||| |||| |||||||||||||    
T  11135920 atgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgta 11135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 196
Target Start/End: Complemental strand, 18057854 - 18057823
Alignment:
Q  165 gcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||||||||||||||||||    
T  18057854 gcggttatggtgtataaggaaatccttatgca 18057823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 27570242 - 27570313
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg 128  Q
    |||||| |||||||||||| ||||||| |||||| |||| |||||| ||  ||||||||| || ||||||||    
T  27570242 actttttaacactctctctgacactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtg 27570313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 28941840 - 28941927
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagt 144  Q
    ||||| ||||||||||| || ||||| | |||| ||||||||||| | ||||||||||| ||| || ||| ||||| |||||||||||    
T  28941840 cttttgaacactctctccaatactcatttttttattggatgaaattattgtatgtcccaccatattatgtgggttccattttctaagt 28941927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 31602077 - 31602120
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaa 101  Q
    |||||||||||||||||||||||||| ||| || ||||||||||    
T  31602077 cttttcaacactctctctaacactcattctcttattggatgaaa 31602120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Complemental strand, 31764022 - 31763987
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  31764022 ggctgcggttatggtgcataaggaaatccttatgca 31763987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 116
Target Start/End: Original strand, 31866361 - 31866392
Alignment:
Q  85 tcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||||||||||||||||||||||||||||||    
T  31866361 tcttttgttggatgaaatcaatgtatgtccca 31866392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 41948309 - 41948218
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttctaagtgta 147  Q
    |||||| |||||| | ||||| |||||||||||| |||||| |||||||||||| | | | || |||||| |||||| |||||| |||||||    
T  41948309 actttttaacactatttctaatactcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgta 41948218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 42133939 - 42133974
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  42133939 ggctgcggttatggtgcataaggaaatccttatgca 42133974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 50425019 - 50424980
Alignment:
Q  67 actctctctaacactcactcttttgttggatgaaatcaat 106  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  50425019 actctctctaacactcactcttttattggataaaatcaat 50424980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 21977205 - 21977263
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||||||||||||| ||||||| | || || |||||||  |||||||||||||    
T  21977205 cttttcaacactctctctaaaactcactttcttatttgatgaaactaatgtatgtccca 21977263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 24886061 - 24886099
Alignment:
Q  64 aacactctctctaacactcactcttttgttggatgaaat 102  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  24886061 aacactctctctaacactcactcttttattgggtgaaat 24886099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 27464791 - 27464749
Alignment:
Q  59 ttttcaacactctctctaacactcactcttttgttggatgaaa 101  Q
    |||||||||||||||||||||||||||| ||| |||| |||||    
T  27464791 ttttcaacactctctctaacactcactcatttattggttgaaa 27464749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 30679051 - 30678981
Alignment:
Q  80 ctcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||   ||||| |||||||||||||||||| || ||||||| ||||| |||||| |||||||||    
T  30679051 ctcactctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtaga 30678981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 21466750 - 21466681
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtat 110  Q
    |||||| |||||| | ||||||  ||||||||| || |||||||| |||| ||||||||||||| |||||    
T  21466750 aatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcagtgtat 21466681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 49730885 - 49730974
Alignment:
Q  61 ttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||||| |||||||||||||||| || ||| |||  ||| |||||| ||  | ||||||| ||||| |||||| |||||||||    
T  49730885 ttcaacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtaga 49730974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 1395397 - 1395365
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  1395397 tgcggttatggtgcataaggaaatccttatgca 1395365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 9041097 - 9041065
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  9041097 tgcggttatggtgcataaggaaatccttatgca 9041065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 9165340 - 9165376
Alignment:
Q  78 cactcactcttttgttggatgaaatcaatgtatgtcc 114  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  9165340 cactcactcttttattgggtgaaatcaatgtatgtcc 9165376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 11430622 - 11430555
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| | ||||||||||| ||||||||||||| |||| |||| ||||||||    
T  11430622 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgg-tgaattcaatgta 11430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 14229170 - 14229202
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  14229170 tgcggttatggtgcataaggaaatccttatgca 14229202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 15660929 - 15660969
Alignment:
Q  76 aacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    ||||||||||||||| |||||| ||||||||| ||||||||    
T  15660929 aacactcactcttttattggataaaatcaatgcatgtccca 15660969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 17893319 - 17893287
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  17893319 tgcggttatggtgcataaggaaatccttatgca 17893287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 28109877 - 28109957
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||| || ||||| | |||| |||||| |||||||| |||| |||| ||||||||||| |||| ||| |||||| |||||    
T  28109877 caacattatcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgg 28109957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 31763766 - 31763802
Alignment:
Q  157 taagggctgcggttatggtgtataaggaaatccttat 193  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  31763766 taaggggtgcggttatggtgcataaggaaatccttat 31763802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 32143815 - 32143783
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  32143815 tgcggttatggtgcataaggaaatccttatgca 32143783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 41095607 - 41095675
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| | ||||||||||| ||||||||  ||| |||| |||||||||||||    
T  41095607 aatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgta 41095675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 49992516 - 49992548
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  49992516 tgcggttatggtgcataaggaaatccttatgca 49992548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 50773105 - 50773177
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||||||| |||| |||  ||||| ||||||||||||| |||||| |||||| |||| | |||| ||||||    
T  50773105 gagaaatgctagcaatactctcttttgaacactctctctagcactcattcttttattgggtaaaattaatgta 50773177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 9687 - 9774
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||||| ||||| |||||  |||||||||    
T  9687 caacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtaga 9774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 11233 - 11320
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||||| ||||| |||||  |||||||||    
T  11233 caacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtaga 11320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 10142153 - 10142046
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttc 139  Q
    |||||| |||||||| | ||||||||||||| |  | ||||||||||||| |||||| |||||||||||||||||| || |||||| |||||| ||||||    
T  10142153 aatgctagcaacactcatttttcaacactctat--agcactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttc 10142056  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  10142055 aaagtgtaga 10142046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 17537265 - 17537171
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtg-tggttctattttctaagtgtagat 150  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||||||| || ||| || |||||  |||||| ||||||||||    
T  17537265 acttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagat 17537171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 4959279 - 4959367
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||| ||||||||  ||||| | |||||||||||| || ||||||||| |||| ||||||||||||||||| ||||||||| |||||    
T  4959279 aatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgtatgtctcatcattttatgtgg 4959367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 28490901 - 28490815
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt 127  Q
    |||||| |||||| | ||||||||| |||||||||| || ||||| |||| |||||||||||||| |||||||||| || |||||||    
T  28490901 aatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgt 28490815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 25545621 - 25545572
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgcaacataaccgcaccc 210  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  25545621 ggctgcggttatggtgcataaggaaatccttatgcaccataaccgcaccc 25545572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 34368361 - 34368470
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttc 139  Q
    |||||| |||||||| | |||| |||||| |||||||||||||||||||  |||||| ||| |||||||||| ||| || ||||||| |||||  |||||    
T  34368361 aatgctagcaacacttatttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatttttc 34368460  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  34368461 aaagtgtaga 34368470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 42224775 - 42224682
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||| |||||| ||||||||  ||||| | ||||||||||| ||||||||||||| || | |||||||||||||||||||| || ||| |||||    
T  42224775 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgg 42224682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 5413878 - 5413807
Alignment:
Q  79 actcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||||| ||||| |||| | |||||||||    
T  5413878 actcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtaga 5413807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 4714766 - 4714864
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtagatacac 154  Q
    |||||| ||| |||| | ||||| ||||| |||| |||||| |||| | ||| |||||||||||||||||| |||||||||||| || |||||||||||    
T  4714766 acttttgaaccctctttttaacattcacttttttattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagatacac 4714864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 31542426 - 31542320
Alignment:
Q  37 gagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctat 135  Q
    |||||||||| |||| |||| ||||| | |||||||||||||||||| |  ||| |||| |||||| |||||| ||||||||| ||| ||||| ||| ||    
T  31542426 gagaaatgctagcaaaactatcttttgagcactctctctaacactcatttatttattgggtgaaattaatgtacgtcccatcactttatgtggattccat 31542327  T
Q  136 tttctaa 142  Q
    |||||||    
T  31542326 tttctaa 31542320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 1649568 - 1649621
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatg 111  Q
    |||||||||||||||||||||||||||| | || ||||||||||| ||||||||    
T  1649568 cttttcaacactctctctaacactcactatcttattggatgaaattaatgtatg 1649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 10253232 - 10253164
Alignment:
Q  70 ctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattt 137  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| || ||| |||| |||||||||    
T  10253232 ctctctaacactcactcttctattggatgaaattaatgtatgtcccaccactttatgtgagttctattt 10253164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 30326053 - 30325981
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    |||||| |||||| | ||||||  ||||||||| || |||||||| |||| ||||||||||||||||||||||    
T  30326053 aatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtc 30325981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 34384863 - 34384783
Alignment:
Q  48 gcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg 128  Q
    ||||| || |||||| || ||| ||| ||||||||| |||||| |||| ||||||||||||||||||||  ||||||||||    
T  34384863 gcaacgctcactttttaatactttctttaacactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtg 34384783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 37455359 - 37455459
Alignment:
Q  50 aacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgt-gtggttctattttctaagtgtag 148  Q
    |||||| | |||| ||||||||||||| ||| ||||| ||| || ||| |||||||||||||| ||| |||||||| | ||||| |||||| ||||||||    
T  37455359 aacactcattttttaacactctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtag 37455458  T
Q  149 a 149  Q
    |    
T  37455459 a 37455459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 40971637 - 40971557
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||| ||||||  |||||||  ||||| | ||||||||||| ||||||||||||| |||  ||||||||||||||||||||    
T  40971637 tgaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtccca 40971557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 41330531 - 41330463
Alignment:
Q  82 cactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||| || |||||||| |||||||||||||||| ||||||| ||||| |||||| |||||||||    
T  41330531 cactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtaga 41330463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 10950109 - 10950196
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg-ttctattttctaagtgtaga 149  Q
    ||||||||||| |  |||| |||||||  ||| ||||||||||||||||||||| |||||||| ||| |||||||||| |||| ||||    
T  10950109 caacactctctttctcacttactctttcattgaatgaaatcaatgtatgtcccaccattttgtatggattctattttcaaagtataga 10950196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 148
Target Start/End: Complemental strand, 13456315 - 13456236
Alignment:
Q  70 ctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtag 148  Q
    |||||||  |||||||||||| | ||||||||||||||||| ||||| |||||| ||| ||||| |||||| ||||||||    
T  13456315 ctctctattactcactcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttccattttcaaagtgtag 13456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 25710629 - 25710542
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtaga 149  Q
    ||||||||||| || ||||||||||||| |||  |||||||||||||||||| | || || || || ||||||||||| |||||||||    
T  25710629 caacactctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtaga 25710542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 25630803 - 25630917
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttcta 134  Q
    ||||||||||| |||| ||| ||||||||||||||||| ||||| | ||| |||| ||  || |||| ||||||| |||||  ||||||| | ||||| |    
T  25630803 tgagaaatgctagcaatacttacttttcaacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaa 25630902  T
Q  135 ttttctaagtgtaga 149  Q
    ||||| |||||||||    
T  25630903 ttttcaaagtgtaga 25630917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 27592607 - 27592521
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgtagat 150  Q
    ||||||||| || |||||||| |||| |||||||||||||||||||||| || || ||| || | ||||||||| | ||||||||||    
T  27592607 acactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagat 27592521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 28434973 - 28434888
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtggttctattttctaagtgtaga 149  Q
    ||||||||||||||||||| | |||||| |||||| |||||||| ||||||||| || | ||| |||||| |||||| |||| ||||    
T  28434973 caacactctctctaacactaattcttttattggataaaatcaatatatgtcccaccactgtgt-tggttcaattttcaaagtttaga 28434888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 11660786 - 11660823
Alignment:
Q  159 agggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11660786 agggctgcggttatggtgcataaggaaatccttatgca 11660823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 28611949 - 28611848
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagtgta 147  Q
    ||||||| |||||| | |||||||||||||| |||||||||  ||||||  || || |||||||||||||| ||||| || |||| |||||  |||||||    
T  28611949 caacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccatttttaaagtgta 28611850  T
Q  148 ga 149  Q
    ||    
T  28611849 ga 28611848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 39246609 - 39246718
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttc 139  Q
    |||||| |||||| | |||||| | ||  |||||||||| ||||| | || |||||| |||||||||||||||||| || |||||||| ||||  |||||    
T  39246609 aatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttc 39246708  T
Q  140 taagtgtaga 149  Q
     |||||||||    
T  39246709 aaagtgtaga 39246718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 43541871 - 43541956
Alignment:
Q  60 tttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtg-gttctattttctaagt 144  Q
    |||||||||||||| ||| |||  ||||||| ||| || ||||||||||||||| ||||| |||||||| |||| |||||| ||||    
T  43541871 tttcaacactctctttaatacttcctcttttattgaataaaatcaatgtatgtctcatcactttgtgtgagttcaattttcaaagt 43541956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 28223960 - 28223884
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    ||||||||||| |||||||| |||||||||||||  || ||||||| | |||||| ||| ||||||| | |||||||    
T  28223960 tgagaaatgctagcaacactcacttttcaacactacctttaacacttattcttttattgaatgaaattattgtatgt 28223884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 32309498 - 32309554
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcc 114  Q
    |||||||||| |||||||| |||||||||| || |||||| |||| |||||||||||    
T  32309498 cttttcaacattctctctagcactcactctcttattggataaaattaatgtatgtcc 32309554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Complemental strand, 22695589 - 22695554
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  22695589 ggctgcggttatggtgcataaggaaatccttatgca 22695554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 196
Target Start/End: Original strand, 28069246 - 28069277
Alignment:
Q  165 gcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||||||||||||||||||    
T  28069246 gcggttatggtgtataaggaaatccttatgca 28069277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 32050489 - 32050418
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgt 112  Q
    |||||| ||||||||  ||||| | || |||||||| |||||||| |||| |||| ||||||||||||||||    
T  32050489 aatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgt 32050418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 196
Target Start/End: Complemental strand, 36864313 - 36864282
Alignment:
Q  165 gcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||||||||||||||||||    
T  36864313 gcggttatggtgtataaggaaatccttatgca 36864282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 41105727 - 41105644
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtg 145  Q
    ||||||||||| ||| ||| |||||||| |||||||||||||| | ||||||||  | ||||||| ||||| |||||| |||||    
T  41105727 caacactctctataaaacttactcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtg 41105644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 20134195 - 20134229
Alignment:
Q  162 gctgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||| |||||||||||||||||||    
T  20134195 gctgcggttatggtgcataaggaaatccttatgca 20134229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 40971453 - 40971519
Alignment:
Q  43 tgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||| ||||||||  ||||| |||||||| ||||||||||||| |||| |||| | |||||||||||    
T  40971453 tgctagcaacactctcttttgaacactctatctaacactcactattttattgggtaaaatcaatgta 40971519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 2525583 - 2525644
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtat 110  Q
    ||||||| | |||| |||||||||| ||||||||  | |||| |||||||||||||||||||    
T  2525583 caacactcattttttaacactctctttaacactcgtttttttattggatgaaatcaatgtat 2525644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 25564090 - 25564037
Alignment:
Q  76 aacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||| || |||||||||    
T  25564090 aacactcacccttttattggatgaaataaatgtatgttccaccactttgtgtgg 25564037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 3340588 - 3340620
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  3340588 tgcggttatggtgcataaggaaatccttatgca 3340620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 4959435 - 4959391
Alignment:
Q  66 cactctctctaacactcactcttttgttggatgaaatcaatgtat 110  Q
    ||||||||||| ||||||||||||| ||||  |||||||||||||    
T  4959435 cactctctctagcactcactcttttattgggggaaatcaatgtat 4959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 7286751 - 7286783
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||||||||||||||| |||||||    
T  7286751 tgcggttatggtgtataaggaaatctttatgca 7286783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 7584863 - 7584899
Alignment:
Q  65 acactctctctaacactcactcttttgttggatgaaa 101  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  7584863 acactctctctaacactcattcttttattggatgaaa 7584899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 15559047 - 15559079
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  15559047 tgcggttatggtgcataaggaaatccttatgca 15559079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 17568700 - 17568768
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| | ||||||| ||| ||| ||||||||| ||||||||||| ||||||    
T  17568700 aatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 17568768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 20134445 - 20134413
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  20134445 tgcggttatggtgcataaggaaatccttatgca 20134413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 26072112 - 26072176
Alignment:
Q  49 caacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtc 113  Q
    |||||||  ||||| | |||||| ||||| ||||| |||||| |||| |||||||||||||||||    
T  26072112 caacactctcttttgagcactctttctaatactcattctttttttgggtgaaatcaatgtatgtc 26072176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 26072290 - 26072218
Alignment:
Q  36 tgagaaatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgt 108  Q
    |||| |||||| ||||||||  ||||| | || |||||||| ||||||||||||| |||| ||||| ||||||    
T  26072290 tgaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgt 26072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 32050330 - 32050414
Alignment:
Q  63 caacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgt 146  Q
    |||||||||||||| || ||| |||||| |||| |||||| ||| |||||| ||||| ||| ||| ||||| |||||| ||||||    
T  32050330 caacactctctctagcattcattcttttattgggtgaaattaatatatgtctcatcactttatgtgggttccattttcaaagtgt 32050414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 39861826 - 39861794
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  39861826 tgcggttatggtgcataaggaaatccttatgca 39861794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 42224589 - 42224657
Alignment:
Q  41 aatgctggcaacactaacttttcaacactctctctaacactcactcttttgttggatgaaatcaatgta 109  Q
    |||||| ||||||||  ||||| |  |||||||| | ||||||||||||| |||| |||||||||||||    
T  42224589 aatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgta 42224657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 43405431 - 43405503
Alignment:
Q  78 cactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||||||||| ||| |||||||||||||||||| || || ||||| |  ||||||||| | |||||||||    
T  43405431 cactcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtaga 43405503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1450 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1450
Description:

Target: scaffold1450; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 748 - 795
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgcaacataaccgcacccc 211  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  748 tgcggttatggtgcataaggaaatccttatgcatcataaccgcacccc 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 296854 - 296912
Alignment:
Q  58 cttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtccca 116  Q
    |||||||||||||||||||||||||||||| || ||||||||||  | |||||||||||    
T  296854 cttttcaacactctctctaacactcactctcttattggatgaaactagtgtatgtccca 296912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 35630 - 35683
Alignment:
Q  76 aacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtgg 129  Q
    |||||||||||| || || ||||||||||||||||||||||||||||| |||||    
T  35630 aacactcactctcttatttgatgaaatcaatgtatgtcccatcattttatgtgg 35683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 27850 - 27922
Alignment:
Q  78 cactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    ||||||| ||||| ||||||| ||||||||||||||||| || ||||||| |||||||||| | |||||||||    
T  27850 cactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtaga 27922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 2239 - 2312
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtggt 130  Q
    ||||||||| | |||||||| ||||||||||||| |  ||||||||||||||||||| ||  | ||||||||||    
T  2239 acttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgtggt 2312  T

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Target: scaffold0832 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 2270 - 2343
Alignment:
Q  57 acttttcaacactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgtggt 130  Q
    ||||||||| | |||||||| ||||||||||||| |  ||||||||||||||||||| ||  | ||||||||||    
T  2270 acttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgtggt 2343  T

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Target: scaffold0204 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 27016 - 26932
Alignment:
Q  66 cactctctctaacactcactcttttgttggatgaaatcaatgtatgtcccatcattttgtgt-ggttctattttctaagtgtaga 149  Q
    |||||||| ||||||||||||| || |||||  |||||||||||||| ||| || ||||||| ||||| |||||| ||| |||||    
T  27016 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtaga 26932  T

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Target: scaffold0516 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Complemental strand, 1297 - 1262
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  1297 ggctgcggttatggtgcataaggaaatccttatgca 1262  T

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Target: scaffold0249 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 23539 - 23574
Alignment:
Q  161 ggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||||||||||||||| |||||||||||||||||||    
T  23539 ggctgcggttatggtgcataaggaaatccttatgca 23574  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 33609 - 33646
Alignment:
Q  159 agggctgcggttatggtgtataaggaaatccttatgca 196  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  33609 aggggtgcggttatggtgcataaggaaatccttatgca 33646  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 20166 - 20134
Alignment:
Q  164 tgcggttatggtgtataaggaaatccttatgca 196  Q
    ||||||||||||| |||||||||||||||||||    
T  20166 tgcggttatggtgcataaggaaatccttatgca 20134  T

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