View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15415_low_16 (Length: 400)
Name: NF15415_low_16
Description: NF15415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15415_low_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 18 - 400
Target Start/End: Complemental strand, 36503266 - 36502882
Alignment:
| Q |
18 |
gatgcgaggaaaagttcgaacggagaagagagtgtaatctcttaggaagagttggagagtgccaacaaagagattgaagctgcgtattggtggaatgtac |
117 |
Q |
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| T |
36503266 |
gatgcgaggaaaagttcgaacggagaagagagtgtaatctcttaggaagagttggagagtgccaacaaagagattgaagctgcgtattggtggaatgtac |
36503167 |
T |
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| Q |
118 |
aaagtgagaggaacagcggaaaaagccacagcaaacataagttgcagcattattttgatattttcttttgtttgtatgtg-ttgttatg-agatgagaga |
215 |
Q |
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| T |
36503166 |
aaagtgagaggaacagcggaaaaagccacagcaaacataagttgcagcattattttgatattttcttttgtttgtatgtgttttttgtgttgatgagaga |
36503067 |
T |
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| Q |
216 |
ggagagtttatggttaagaaattaagattggattatgaatgaatttacgatgatagtgatcatggagacaaaatttgagggtctggttggatcgatcact |
315 |
Q |
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| T |
36503066 |
ggagagtttatggttaagaaattaagattggattatgaatgaatttacgatgatagtgatcatggagacaaaatttgagggtctggttggatcgatcact |
36502967 |
T |
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| Q |
316 |
tttcaatcattgtgttgtgggaaagagaagaccgggcaatttatttaggaaattgccaatcaaactaattagttttaaatttttt |
400 |
Q |
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| T |
36502966 |
tttcaatccttgtcttgtggaaaagggaagaccgagcaatttatttaggaaattgccaatcaaactaattagttttaaatttttt |
36502882 |
T |
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