View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15416_high_11 (Length: 272)
Name: NF15416_high_11
Description: NF15416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15416_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 27981861 - 27982117
Alignment:
| Q |
1 |
atcataaaatatttgttgaaagtaattagatttcggtgtaaatcatccatttatcattgaacacttgaattgatccaaactggacatttttgaccggaag |
100 |
Q |
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| T |
27981861 |
atcataaaatatttgttgaaagtaattagattttggtgtaaatcatcaatttatcattgaaaacttgaattgatccaaactggacatttttgataggaag |
27981960 |
T |
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| Q |
101 |
gcaaagtcacattgttaagcacccacatgtgcgtctgcacgaggaaactggacaggatttagtaaggaacagatccaaactcatgatatattgacgtaac |
200 |
Q |
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| T |
27981961 |
gcaaagtcacattgttaagcacccacacgtgcgtctgcacgaggaaactggacagaatttagaaaggaacagatccaaactcatgatatattgacgtaac |
27982060 |
T |
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| Q |
201 |
aacacgagtaagacccatttaatgatgtgacccaacacatattttttgtgtctatat |
257 |
Q |
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| T |
27982061 |
aacacgagtaagacccatttaatgatgggacccaacatatattttttatgtctatat |
27982117 |
T |
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