View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15416_high_16 (Length: 223)
Name: NF15416_high_16
Description: NF15416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15416_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 40952084 - 40951890
Alignment:
| Q |
13 |
aagaagcatgaataaaagtatggtataagaattaaaaatcaaagcatgaaaatgacaaaaactgaaagctgagttgagaatgttaagatctaatacatta |
112 |
Q |
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| T |
40952084 |
aagaagcatgaataaaactatggtataagaattaaaaatcaaagcatgaaaatgacaaaaactgaaagctgagttgaaaatgttaagatataatacatta |
40951985 |
T |
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| Q |
113 |
aaaggcatatctcaatttttgagctttgtgaatttagaagtaatgaaccctagaaattaagcagtgtgaaatatttatacctgtttagtggaagg |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
40951984 |
aaaggcatatctcaatttttgagctttgtgaatttagaagtaatgaaccctagaaattaagcagtgtgaaatatttatacctgttcagtggaagg |
40951890 |
T |
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