View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1541_low_14 (Length: 371)
Name: NF1541_low_14
Description: NF1541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1541_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 18 - 353
Target Start/End: Complemental strand, 11285179 - 11284844
Alignment:
| Q |
18 |
ctggtggggataagaatcctttggataaacccaattaagatgaaagtaaccaacacacatatgtcacttattatcaacctttttaacaagtacaacattt |
117 |
Q |
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| T |
11285179 |
ctggtggggataagaatcctttggataaacccaattaagatgaaagtagccaacacacatattttccttattatcaacctttttaacaagtatagcattt |
11285080 |
T |
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| Q |
118 |
gataatcaagtagtatatttggcttcaaatacaaagacggcctttagaaagtcttccacgtctttcttagtggcttatgcctttttcaggttattgctta |
217 |
Q |
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| T |
11285079 |
gataatcaagtagtatatttggcttcaaatacaaagacgacctttagaaagtcttccacgtctttcttagtggcttatgcctttttctggttattgctta |
11284980 |
T |
|
| Q |
218 |
ctccgacattgcaccacgtagtgatccttcttgtcgatagataaattgtgacatactattttacaatctattcttcgaatttttgtagtcatccatgcaa |
317 |
Q |
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| T |
11284979 |
ctccgacattgcaccacgtagtgatccttcttgtcgatagataaatcgtgacatactatttcacaatctattcttcgaatttttgtagtcatccatgcaa |
11284880 |
T |
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| Q |
318 |
atagatttgcgtttctctcaagacatttggtcagct |
353 |
Q |
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| T |
11284879 |
atagatttgcgtttctctcaagacatttggtcagct |
11284844 |
T |
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