View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1541_low_24 (Length: 252)
Name: NF1541_low_24
Description: NF1541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1541_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 50404693 - 50404759
Alignment:
| Q |
14 |
atgatattcatatgcgccttatatttgtgcggatatccgctaaacaagtcgaggtacaaacatgcac |
80 |
Q |
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| T |
50404693 |
atgatattcatatgcgccttatatttgtgcggatatccgttaaacaagttgaggtacaaacatgcac |
50404759 |
T |
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