View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15422_low_15 (Length: 223)
Name: NF15422_low_15
Description: NF15422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15422_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 32528228 - 32528414
Alignment:
| Q |
18 |
aggcaagaaatacaaccacaaactaaagatttcaaactgaacctacctagatggggnnnnnnnnnccaaaaccactgacgtaaccgccagagttctgaaa |
117 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
32528228 |
aggcaagaaatacagccacaaactaaagatttcaaactgaacctacctagatggggtttttctt-ccaaaaccactgacgtaaccgccagagttctgaaa |
32528326 |
T |
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| Q |
118 |
taacaatggacaaacattcatcttctcgagtcaacattcatcatcgcgagaaaacctaaaagtagtgatggccttgcacatccctatt |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32528327 |
taacaatggacaaacattcatcttctcgagtcaacattcatcatcgcgagaaaacctaaaagtagtgatggccttgcacatccctatt |
32528414 |
T |
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