View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15423_high_72 (Length: 222)
Name: NF15423_high_72
Description: NF15423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15423_high_72 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 29457750 - 29457547
Alignment:
| Q |
1 |
caaaactttatctccatatatagaatgccatttgtcctattatttaatgctgcccacatgtttatagataaattcaataatcttttttgtttgaaaggat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29457750 |
caaaactttatctccatatatagaatgccatttgtcctattatttaatgctgcccacatgtttatagataaattcaataatcttttttgtttgaaaggat |
29457651 |
T |
|
| Q |
101 |
aaattcaacccccttctttatttttcaattgttgttttctaacctttaatgcataaaataaccacaatatctttagtttagtatcatttttactagtatt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29457650 |
aaattcaacccccttctttatttttcaattgttgttttctaacctttaatgcataaaataaccacaatatctttagtttagtatcatttttactagtatt |
29457551 |
T |
|
| Q |
201 |
cctc |
204 |
Q |
| |
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|||| |
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|
| T |
29457550 |
cctc |
29457547 |
T |
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