View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15423_low_53 (Length: 288)
Name: NF15423_low_53
Description: NF15423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15423_low_53 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 273
Target Start/End: Complemental strand, 32824128 - 32823869
Alignment:
| Q |
13 |
aatataggtcattaagttgaaaatgttgaaaattgaaatctcaaaggtataaaccttcatgttaattggagacactctttctttacctatcacaaagtac |
112 |
Q |
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| T |
32824128 |
aatataggtcattaagttgaaaatgttgaaaattgaaatctcaaaggtataaaccttcatgttaatgggagacactctttctttacctatcacaaagtac |
32824029 |
T |
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| Q |
113 |
acggtttgttatctttaagttcaactaaaatttctttaaagtctcccgacttagagtcatcttcttctaaaacttcaaaggaaacgaagttatcctttct |
212 |
Q |
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|||||||||||| |||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32824028 |
acggtttgttat-tttaagttcaacaaatttttttttaaagtctcccgactcagagtcatcttcttctaaaacttcaaaggaaacaaagttatcctttct |
32823930 |
T |
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| Q |
213 |
tccttagagaattttggcactattttattcttctcctcgtggagacatattcactcatttg |
273 |
Q |
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||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
32823929 |
tccttggagaattttggcactattttattcttctcctcatggagacatattcactcatttg |
32823869 |
T |
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