View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15423_low_76 (Length: 222)
Name: NF15423_low_76
Description: NF15423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15423_low_76 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 38760629 - 38760456
Alignment:
| Q |
30 |
aaaagaggttttttcatgtgggnnnnnnnnngttttgttacgtaaattttccctgtaaagtgtaccatgttcttcctttgaagctactgccagaagagaa |
129 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38760629 |
aaaagaggttttttcatgtgggaaaaaaaaagttttgttacgtaaattttccctgtaaagtgtaccatgttcttcctttgaagctactgccagaagagaa |
38760530 |
T |
|
| Q |
130 |
aagagctaaaacagattcgagctttgcatatgcactcaaaatatgcaaaagttcgtacaatctttcagaacatg |
203 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38760529 |
aagagctaaaacagattcgagatttccatatgcactcaaaatatgcaaaagttcgtacaatctttcagaacatg |
38760456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University