View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15424_high_3 (Length: 614)
Name: NF15424_high_3
Description: NF15424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15424_high_3 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 18 - 457
Target Start/End: Original strand, 354329 - 354768
Alignment:
| Q |
18 |
gcaaagtgacatcgcaaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtg |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
354329 |
gcaaagtgacatagcaaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtg |
354428 |
T |
 |
| Q |
118 |
gttttaatctatgaggaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactc |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
354429 |
gttttaatctatgaggaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcatgcaaggaggaagactc |
354528 |
T |
 |
| Q |
218 |
tgactgctatggatgttgtttatcagggaagaaccctctacagttttggtggatgaagaagatgaagatttgttatgttgtttctttgtatttgtagcat |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
354529 |
tgactgctatggatgttgtttatcagggaagaaccctctacagttttggtggatgaagaagatgaagatttgttatgttgtttctttgtatttgtagcat |
354628 |
T |
 |
| Q |
318 |
gtgagtgttccgtacaattgttatcattgtaatctaatgaaatgatctttcatggtgaactctgattctaacttatgttaatcccttgactnnnnnnntt |
417 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
354629 |
gtgagtgttccatacaattgttatcattgtaatctaatgaaatgatctttcatggtgaactctgattctaacttatgttaatcccttgactaaaaaaatt |
354728 |
T |
 |
| Q |
418 |
agacaaatacacagtttaatttggtttcgatgaagtacag |
457 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
354729 |
agacaaatacacagtttaatttggtttcgatgaagtacag |
354768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 408
Target Start/End: Original strand, 10580712 - 10581116
Alignment:
| Q |
18 |
gcaaagtgacatcgcaaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtg |
117 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10580712 |
gcaaagtgatattgcaaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagagttggtgtgaagaggatcagtg |
10580811 |
T |
 |
| Q |
118 |
gttttaatctatgaggaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactc |
217 |
Q |
| |
|
| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
10580812 |
g-tttgatctatgaggaaataagaggactgttgaagattttcttgcagaataagattcttgatgctgttacttacactgagc-----atgaggaagactc |
10580905 |
T |
 |
| Q |
218 |
tgactgctatggatgttgtttatcagggaagaaccctctacagttttggtggatgaagaagatgaagatttgttatgttgtttctttgtatttgtagcat |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| |||||||| | ||| |
|
|
| T |
10580906 |
tgactgctatggatgttgtttatcagggaagaaccctctatggttttggtggatgaagaagatgaagatttgttaagctgtttctgtgtatttgaaacat |
10581005 |
T |
 |
| Q |
318 |
gtgagtgttccgtacaattgttatc--------------------attgtaatctaatgaaatgatctttcatggtgaactctgattctaacttatgtta |
397 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10581006 |
gtgagtgttccgtataattgttatcgttttgtaagttttatcaagattgtaatataatgaaatgatctttcatggtgaattctgattctaacttatgtta |
10581105 |
T |
 |
| Q |
398 |
atcccttgact |
408 |
Q |
| |
|
||||||||||| |
|
|
| T |
10581106 |
atcccttgact |
10581116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 10575312 - 10575532
Alignment:
| Q |
18 |
gcaaagtgacatcgcaaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtg |
117 |
Q |
| |
|
|||||| |||||||||||||||| | | ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||||||| || ||||||| |
|
|
| T |
10575312 |
gcaaagagacatcgcaaggttctccgtgacaacatccaaggaatcacaaagccagcgattcgtcgattggcgagaagaggaggtgtgaaaagaatcagtg |
10575411 |
T |
 |
| Q |
118 |
gttttaatctatgaggaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactc |
217 |
Q |
| |
|
| || ||||||||||||| |||||| ||||||||||| |||||| |||||| || | |||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
10575412 |
g-attgatctatgaggaaacaagaggtgtgttgaagatcttcttggagaatgttataagagatgctgttacttacactgagcatgcgaggaggaaaactg |
10575510 |
T |
 |
| Q |
218 |
tgactgctatggatgttgttta |
239 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
10575511 |
tgactgctatggatgttgttta |
10575532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 534 - 597
Target Start/End: Original strand, 354845 - 354908
Alignment:
| Q |
534 |
gtgagtgtttgttaacttgatttttagtagttttgttattttaacgtcgtggatgcacaggtgt |
597 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
354845 |
gtgagtgtttgttaacttgatttttagtagttttgttattttaacgtcgtggatgcacaggtgt |
354908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 534 - 597
Target Start/End: Original strand, 10581244 - 10581307
Alignment:
| Q |
534 |
gtgagtgtttgttaacttgatttttagtagttttgttattttaacgtcgtggatgcacaggtgt |
597 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
10581244 |
gtgagtgtttgttaacttgattttttttagttttgttattttaacttagtggatgcgcaggtgt |
10581307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 39954957 - 39954885
Alignment:
| Q |
164 |
agaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatgttgt |
236 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||| ||| |||||||| ||| | || || ||||||||||| |
|
|
| T |
39954957 |
agaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaaaactgttaccgccatggatgttgt |
39954885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 110; Significance: 4e-55; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 47 - 240
Target Start/End: Complemental strand, 21584825 - 21584633
Alignment:
| Q |
47 |
taacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtggttttaatctatgaggaaataagaggagt |
146 |
Q |
| |
|
||||||||| ||||| || ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| | | |||||||||| ||||||||| |
|
|
| T |
21584825 |
taacattcagggaatcaccaagccagcgattcgtcgattggcgagaagaggtggtgttaagagaatcagtggtttgatt-tatgaggaaacaagaggagt |
21584727 |
T |
 |
| Q |
147 |
gttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatgttgtttat |
240 |
Q |
| |
|
| |||||||||||| |||||| |||| ||||||| ||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21584726 |
tcttaagattttcttggagaatgtgattcgtgatgcggttacgtacactgagcatgcaaggaggaagactgtgactgctatggatgttgtttat |
21584633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 33 - 236
Target Start/End: Original strand, 25084978 - 25085180
Alignment:
| Q |
33 |
aaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtggttttaatctatgag |
132 |
Q |
| |
|
||||||||| | | |||||| || || || || ||||| || ||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||| |
|
|
| T |
25084978 |
aaggttcttcgtgataacatccagggtatcaccaagcctgccattcgtagattggcgagaagaggtggtgtgaagagaatcagtgg-tttgatatatgaa |
25085076 |
T |
 |
| Q |
133 |
gaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatg |
232 |
Q |
| |
|
|||| ||||| || |||||||| |||||| |||||| ||| ||||||| ||||| |||||||||| ||||||||||||||| |||| || ||||||| |
|
|
| T |
25085077 |
gaaaccagaggtgtcttgaagatcttcttggagaatgtgatccgtgatgcagttacatacactgagcacgcaaggaggaagactgtgacagccatggatg |
25085176 |
T |
 |
| Q |
233 |
ttgt |
236 |
Q |
| |
|
|||| |
|
|
| T |
25085177 |
ttgt |
25085180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 33 - 236
Target Start/End: Complemental strand, 24923702 - 24923500
Alignment:
| Q |
33 |
aaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtggttttaatctatgag |
132 |
Q |
| |
|
||||||||| | | |||||| || || || || ||||| || |||||| ||||||| |||||||||||||| ||||| ||||||||||| | ||||||| |
|
|
| T |
24923702 |
aaggttcttcgtgataacatccagggtatcaccaagcctgctattcgtcgattggcaagaagaggtggtgttaagagaatcagtggtttga-tctatgaa |
24923604 |
T |
 |
| Q |
133 |
gaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatg |
232 |
Q |
| |
|
|||| ||||| || |||||||| |||||| |||||| ||| |||||||||| || |||||||||| |||||||||||||| |||| || ||||||| |
|
|
| T |
24923603 |
gaaaccagaggtgtcttgaagatcttcttggagaatgtcattcgtgatgctgtgacatacactgagcacgcaaggaggaagacagtgacagccatggatg |
24923504 |
T |
 |
| Q |
233 |
ttgt |
236 |
Q |
| |
|
|||| |
|
|
| T |
24923503 |
ttgt |
24923500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 66 - 236
Target Start/End: Complemental strand, 24497468 - 24497299
Alignment:
| Q |
66 |
aagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtggttttaatctatgaggaaataagaggagtgttgaagattttcttgcag |
165 |
Q |
| |
|
||||| || |||||| ||||||| |||||||||||||| ||||| |||||||| || | ||||||| |||| ||||| || |||||||| |||||| | |
|
|
| T |
24497468 |
aagcctgctattcgtcgattggcaagaagaggtggtgttaagagaatcagtggattga-tctatgaagaaaccagaggtgtcttgaagatcttcttggaa |
24497370 |
T |
 |
| Q |
166 |
aatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatgttgt |
236 |
Q |
| |
|
|||| ||| ||||||| ||||| |||||||||| ||||||||||||||| |||| || ||||||||||| |
|
|
| T |
24497369 |
aatgtgatccgtgatgcagttacatacactgagcacgcaaggaggaagactgtgacagccatggatgttgt |
24497299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 66 - 236
Target Start/End: Complemental strand, 31825766 - 31825597
Alignment:
| Q |
66 |
aagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtggttttaatctatgaggaaataagaggagtgttgaagattttcttgcag |
165 |
Q |
| |
|
||||| || |||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||| || |||||||| |||||| || |
|
|
| T |
31825766 |
aagcctgccattcgtcgattggcgagaagaggtggtgtgaagaggatcagtgg-tttgatctatgaagaaactagaggtgtcttgaagatcttcttggag |
31825668 |
T |
 |
| Q |
166 |
aatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatgttgt |
236 |
Q |
| |
|
|||| || ||||||| || || |||||||||| || ||||||||||| | || || ||||||||||| |
|
|
| T |
31825667 |
aatgtcatccgtgatgcggtcacatacactgagcacgctaggaggaagacagttaccgcgatggatgttgt |
31825597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 24920095 - 24919929
Alignment:
| Q |
66 |
aagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtggttttaatctatgaggaaataagaggagtgttgaagattttcttgcag |
165 |
Q |
| |
|
||||| || |||||| ||||||| |||||||||||||||||||| ||||| || ||| |||||||| |||| ||||| || |||||||| ||||| || |
|
|
| T |
24920095 |
aagcctgcaattcgtcgattggcaagaagaggtggtgtgaagagaatcagcgg-tttgatctatgaagaaaccagaggtgtcttgaagatcttcttagag |
24919997 |
T |
 |
| Q |
166 |
aatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatgt |
233 |
Q |
| |
|
|||| ||| |||||||||| || |||||||||| || ||||||||||| |||| || |||||||| |
|
|
| T |
24919996 |
aatgtcattcgtgatgctgtgacatacactgagcacgctaggaggaagacagtgacagccatggatgt |
24919929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 66 - 236
Target Start/End: Original strand, 24982019 - 24982188
Alignment:
| Q |
66 |
aagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtggttttaatctatgaggaaataagaggagtgttgaagattttcttgcag |
165 |
Q |
| |
|
||||| || |||||| ||||||| |||||||||||||| ||||| |||||||| ||| || ||||| |||| ||||| || |||||||| |||||| || |
|
|
| T |
24982019 |
aagcctgctattcgtcgattggcaagaagaggtggtgttaagagaatcagtgg-tttgatatatgaagaaaccagaggtgtcttgaagatcttcttggag |
24982117 |
T |
 |
| Q |
166 |
aatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatgttgt |
236 |
Q |
| |
|
|||| || ||||||| ||||| |||||||||| || |||||||||||| | || || ||||||||||| |
|
|
| T |
24982118 |
aatgtcatccgtgatgcagttacatacactgagcacgctaggaggaagactgttaccgccatggatgttgt |
24982188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 14261289 - 14261068
Alignment:
| Q |
18 |
gcaaagtgacatcgcaaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtg |
117 |
Q |
| |
|
|||||| |||||||||| || ||| | | ||||| |||||||| ||||||||||||||||| |||| ||||||||||| ||||||||||| ||||| | |
|
|
| T |
14261289 |
gcaaagagacatcgcaaagtgcttcgtgacaacatccaaggaatcacaaagccagcgattcggcgattagcgagaagaggaggtgtgaagagaatcagcg |
14261190 |
T |
 |
| Q |
118 |
gttttaatctatgaggaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactc |
217 |
Q |
| |
|
| || | | ||||| |||| | || |||||||||||||||||| |||||| ||| | ||||||||||| || ||||| | ||| ||||||||||| |
|
|
| T |
14261189 |
ggttgatt-tatgaagaaactcgcggtgtgttgaagattttcttggagaatgtgataagagatgctgttacgtatactgaacatgcgaggaggaagacgg |
14261091 |
T |
 |
| Q |
218 |
tgactgctatggatgttgtttat |
240 |
Q |
| |
|
| ||||||||||||||||||||| |
|
|
| T |
14261090 |
ttactgctatggatgttgtttat |
14261068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 22898477 - 22898699
Alignment:
| Q |
17 |
agcaaagtgacatcgcaaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagt |
116 |
Q |
| |
|
||||||| ||||||| ||||| ||| | | ||||| || |||||||||||||||||||||||| | | || | ||||| || |||||| | |||||| |
|
|
| T |
22898477 |
agcaaagcgacatcgtaaggtgcttcgtgacaacatccagggaataacaaagccagcgattcgtcgtcttgctcgtagaggaggagtgaagcgtatcagt |
22898576 |
T |
 |
| Q |
117 |
ggttttaatctatgaggaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagact |
216 |
Q |
| |
|
||||| | | |||||||| | | | || ||||||||||| || ||| |||||| |||| | |||||||| ||||||||||||| || || |||||||| |
|
|
| T |
22898577 |
ggtttgatt-tatgaggagacacgtggcgtgttgaagatatttttggagaatgtgattagagatgctgtgacttacactgagcacgctagaaggaagacg |
22898675 |
T |
 |
| Q |
217 |
ctgactgctatggatgttgtttat |
240 |
Q |
| |
|
| |||||||||||||| |||||| |
|
|
| T |
22898676 |
gttactgctatggatgtggtttat |
22898699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 22950145 - 22950367
Alignment:
| Q |
17 |
agcaaagtgacatcgcaaggttctttgcggtaacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagt |
116 |
Q |
| |
|
||||||| ||||||| ||||| ||| | | ||||| || |||||||||||||||||||||||| | | || | ||||| || |||||| | |||||| |
|
|
| T |
22950145 |
agcaaagcgacatcgtaaggtgcttcgtgacaacatccagggaataacaaagccagcgattcgtcgtcttgctcgtagaggaggagtgaagcgtatcagt |
22950244 |
T |
 |
| Q |
117 |
ggttttaatctatgaggaaataagaggagtgttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagact |
216 |
Q |
| |
|
||||| | | |||||||| | | | || ||||||||||| || ||| |||||| |||| | |||||||| ||||||||||||| || || |||||||| |
|
|
| T |
22950245 |
ggtttgatt-tatgaggagacacgtggcgtgttgaagatatttttggagaatgtgattagagatgctgtgacttacactgagcacgctagaaggaagacg |
22950343 |
T |
 |
| Q |
217 |
ctgactgctatggatgttgtttat |
240 |
Q |
| |
|
| |||||||||||||| |||||| |
|
|
| T |
22950344 |
gttactgctatggatgtggtttat |
22950367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 47 - 240
Target Start/End: Original strand, 41027526 - 41027718
Alignment:
| Q |
47 |
taacattcaaggaataacaaagccagcgattcgtagattggcgagaagaggtggtgtgaagaggatcagtggttttaatctatgaggaaataagaggagt |
146 |
Q |
| |
|
||||||||||||||| || ||||| ||||||||| | ||||| | ||||| || |||||| | || || ||||| | |||| || || | | | || || |
|
|
| T |
41027526 |
taacattcaaggaattacgaagcctgcgattcgtcgtttggcacgtagaggaggagtgaagcgtataagcggtttga-tctacgaagagacacgtggcgt |
41027624 |
T |
 |
| Q |
147 |
gttgaagattttcttgcagaatgagatttgtgatgctgttacttacactgagcgtgcaaggaggaagactctgactgctatggatgttgtttat |
240 |
Q |
| |
|
||||||||| || ||| |||||| ||| ||||||||||||||||||| |||| || ||||| |||||| | ||||||||||||||||||||| |
|
|
| T |
41027625 |
gttgaagatctttttggagaatgttattcgtgatgctgttacttacacagagcacgctaggagaaagactgttactgctatggatgttgtttat |
41027718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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