View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15424_low_1 (Length: 872)

Name: NF15424_low_1
Description: NF15424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15424_low_1
NF15424_low_1
[»] chr7 (1 HSPs)
chr7 (154-853)||(2451629-2452330)
[»] chr2 (8 HSPs)
chr2 (289-382)||(29651760-29651854)
chr2 (289-383)||(5788875-5788970)
chr2 (289-356)||(29977364-29977432)
chr2 (195-258)||(6912418-6912481)
chr2 (307-382)||(40599657-40599731)
chr2 (289-382)||(3395456-3395550)
chr2 (196-258)||(13439262-13439324)
chr2 (210-277)||(20444194-20444263)
[»] scaffold0159 (1 HSPs)
scaffold0159 (289-383)||(33248-33343)
[»] chr1 (4 HSPs)
chr1 (289-363)||(43387103-43387178)
chr1 (289-361)||(47783156-47783229)
chr1 (305-363)||(22636339-22636397)
chr1 (329-382)||(3838177-3838230)
[»] chr5 (2 HSPs)
chr5 (289-380)||(38015936-38016028)
chr5 (223-277)||(19320287-19320343)
[»] chr4 (5 HSPs)
chr4 (289-380)||(13228683-13228775)
chr4 (329-382)||(52543041-52543094)
chr4 (315-363)||(48683181-48683229)
chr4 (305-356)||(36697772-36697823)
chr4 (305-363)||(50158196-50158254)
[»] chr6 (4 HSPs)
chr6 (289-363)||(1599690-1599765)
chr6 (238-356)||(31737164-31737287)
chr6 (290-379)||(16707299-16707389)
chr6 (289-354)||(33350306-33350372)
[»] chr3 (1 HSPs)
chr3 (289-363)||(50331962-50332037)
[»] chr8 (5 HSPs)
chr8 (307-356)||(17871245-17871294)
chr8 (289-361)||(42797289-42797362)
chr8 (310-363)||(45247787-45247840)
chr8 (195-251)||(12159333-12159389)
chr8 (329-383)||(40260479-40260533)
[»] scaffold0216 (1 HSPs)
scaffold0216 (289-356)||(29174-29242)
[»] scaffold0002 (1 HSPs)
scaffold0002 (310-383)||(95774-95846)


Alignment Details
Target: chr7 (Bit Score: 618; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 618; E-Value: 0
Query Start/End: Original strand, 154 - 853
Target Start/End: Complemental strand, 2452330 - 2451629
Alignment:
Q  154 tcatcataatgttgagatattcattcacgggatcttacgttaagtttaatgatcatattagactaagagaatccacataaatgaatttgacaccacatct 253  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  2452330 tcatcataatgttgggatattcattcgcgggatcttacgttaagtttaatgatcatattagactaagagaattcacatagatgaatttgacaccacatct 2452231  T
Q  254 tcaccaaaccttaaggtattaggtttgactcaaaacacttatatgttttcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacat 353  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2452230 tcaccaaaccttaaggcattaggtttgagtcaaaacacttatatgttttcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacat 2452131  T
Q  354 taaaatctcttctccaagtatgagactctcgacaaccgggatccatcactgggaatcaattatgcttcccaacaaagttaaaccgagatatg-taccatc 452  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  2452130 taaaatctcttctccaagtatgagactctcgacaaccggggtccatcactgggaatcaattatgcttcccaacaaagttaaaccgagatatgttaccatt 2452031  T
Q  453 gttggactttattagggagtcaacacttatgtggatactcattggacagaaagaaaccacatgtatccatatctaatccacgtttgccacaaaatatttt 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    ||||||||||||    
T  2452030 gttggactttattagggagtcaacacttatgtggatactcattggacagaaagaaatcacatgtatccatatctaatccacgctcagtacaaaatatttt 2451931  T
Q  553 aaatatgacaaaattctagttcgtgtttggcatagatatccatactagtttaacatatgaggaaagtagtagcatgcatagacaattaaagcatggtaaa 652  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2451930 aaatatgacaaaattctagttcgtgtttggcatagatatccataatagtttaacatatgaggaaagtagtagcatgcatagacaattaacgcatggtaaa 2451831  T
Q  653 catctaagagatattatcaagtggctaattggtatgttagtgttattctct-tttgccaggacttgaaacttggacatttaaactccttaaccgttaact 751  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2451830 catctaagggatattatcaagtggctaattggtatgttagtgttattctctctttgccaggacttgaaacttggacatttaaactccttaaccgttaact 2451731  T
Q  752 taaaagctgagccacctaacctccctattcatttgcacatttgatccatttatacgaattcaagtatgactcacttatatggtgcatggtaaatatgttt 851  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2451730 taaaagctgagccacctaacctccctattcatttgcacatttgatccatttatacgaattcaagtatgactcacttatatggtgcatggtaaatatgttt 2451631  T
Q  852 aa 853  Q
    ||    
T  2451630 aa 2451629  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 382
Target Start/End: Complemental strand, 29651854 - 29651760
Alignment:
Q  289 cacttatatgtt-ttcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactct 382  Q
    |||||| ||||| ||| |||| |||| ||||||||||||||||||||||||||||| |||| ||||||| ||| ||||  ||||||||| |||||    
T  29651854 cacttagatgttgttcaacatctactcttgcattcaatgtgaaactttaactcacatttgacacattaacatcacttcctcaagtatgaaactct 29651760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 383
Target Start/End: Original strand, 5788875 - 5788970
Alignment:
Q  289 cacttatatgtt-ttcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactctc 383  Q
    |||||||||||| ||| |||| |||| ||||||||||||||  | ||||||||||| |||| ||||||| ||||||||   |||||||||||||||    
T  5788875 cacttatatgttgttcaacatctactattgcattcaatgtgttattttaactcacatttgacacattaacatctcttcattaagtatgagactctc 5788970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 29977364 - 29977432
Alignment:
Q  289 cacttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaa 356  Q
    ||||||||||||| || ||||  ||| |||||||||||||| |||||||||| |||||||| |||||||    
T  29977364 cacttatatgtttatcaacatccactcttgcattcaatgtggaactttaacttacacttgacacattaa 29977432  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 6912481 - 6912418
Alignment:
Q  195 aagtttaatgatcatattagactaagagaatccacataaatgaatttgacaccacatcttcacc 258  Q
    |||||| || || ||||||||||||||||||| ||| || ||| ||||||||||||| ||||||    
T  6912481 aagtttcatcataatattagactaagagaatcaacacaagtgattttgacaccacattttcacc 6912418  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 40599657 - 40599731
Alignment:
Q  307 atttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactct 382  Q
    ||||||| ||||||||| ||  ||||||||||| |||||| | ||||||| ||||||||  |||||||||||||||    
T  40599657 atttactcttgcattca-tgcaaaactttaacttacacttaacacattaacatctcttcctcaagtatgagactct 40599731  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 289 - 382
Target Start/End: Original strand, 3395456 - 3395550
Alignment:
Q  289 cacttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactct 382  Q
    ||||||||||||| || |||| |||| |||||||||| |||  | |||||||||||| ||| ||||||| |||||| |   ||||||||||||||    
T  3395456 cacttatatgtttctcaacatctactattgcattcaaagtgttattttaactcacacctgacacattaacatctctccattaagtatgagactct 3395550  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 13439262 - 13439324
Alignment:
Q  196 agtttaatgatcatattagactaagagaatccacataaatgaatttgacaccacatcttcacc 258  Q
    ||||| || |||| ||||||||||||||||||| | || ||| ||||||||||||| ||||||    
T  13439262 agtttgatcatcacattagactaagagaatccatacaagtgagtttgacaccacattttcacc 13439324  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 20444263 - 20444194
Alignment:
Q  210 attagactaagagaatccacataaatgaatttgacaccacatcttca--ccaaaccttaaggtattaggt 277  Q
    |||||| ||||||||||||| ||| ||| |||||||||| |||||||  | ||||||||||| |||||||    
T  20444263 attagagtaagagaatccacttaagtgagtttgacaccatatcttcatcctaaaccttaaggcattaggt 20444194  T

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Target: scaffold0159 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 383
Target Start/End: Original strand, 33248 - 33343
Alignment:
Q  289 cacttatatgtt-ttcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactctc 383  Q
    |||||||||||| ||| |||| |||| ||||||||||||||  | ||||||||||| |||| ||||||| ||||||||   |||||||||||||||    
T  33248 cacttatatgttgttcaacatctactattgcattcaatgtgttattttaactcacatttgacacattaacatctcttcattaagtatgagactctc 33343  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 363
Target Start/End: Original strand, 43387103 - 43387178
Alignment:
Q  289 cacttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctct 363  Q
    ||||||||||||| || |||| |||| |||||||||||||| || |||||||||||||||| ||||||| ||||||    
T  43387103 cacttatatgtttctcaacatctactattgcattcaatgtgtaattttaactcacacttgacacattaacatctct 43387178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 47783229 - 47783156
Alignment:
Q  289 cacttatatgtt-ttcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatct 361  Q
    |||||||||||| ||  ||| ||||| |||||  ||||||||||||||||||||||||||| ||||||| ||||    
T  47783229 cacttatatgttgttaaacaattactcttgcagccaatgtgaaactttaactcacacttgacacattaacatct 47783156  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 22636339 - 22636397
Alignment:
Q  305 acatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctct 363  Q
    |||| |||| |||||||||| || ||| |||||||||||||||||| ||||| ||||||    
T  22636339 acatctactcttgcattcaaagtcaaattttaactcacacttgaaaaattaacatctct 22636397  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 3838177 - 3838230
Alignment:
Q  329 aaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactct 382  Q
    ||||||||||| |||||||| ||||||| ||||| ||  |||||||||||||||    
T  3838177 aaactttaacttacacttgacacattaacatctcgtcctcaagtatgagactct 3838230  T

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Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 380
Target Start/End: Original strand, 38015936 - 38016028
Alignment:
Q  289 cacttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagact 380  Q
    ||||||||||||  || |||| |||| ||||||||||||||  | |||||||||||||||| ||||||| |||||| |  |||||||||||||    
T  38015936 cacttatatgttgctcaacatctactattgcattcaatgtgttattttaactcacacttgacacattaacatctctccatcaagtatgagact 38016028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 19320287 - 19320343
Alignment:
Q  223 aatccacataaatgaatttgacaccacatcttcacc--aaaccttaaggtattaggt 277  Q
    |||||||| |||||||||||||||||||||||| ||  ||||||||||  |||||||    
T  19320287 aatccacacaaatgaatttgacaccacatcttcgccctaaaccttaagacattaggt 19320343  T

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Target: chr4 (Bit Score: 37; Significance: 0.00000000002; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 380
Target Start/End: Complemental strand, 13228775 - 13228683
Alignment:
Q  289 cacttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagact 380  Q
    ||||||||||||| || |||| |||| ||||||||||||||  | |||||||||||||||| ||||||| |||||| |   ||||||||||||    
T  13228775 cacttatatgtttctcaacatctactattgcattcaatgtgttattttaactcacacttgacacattaacatctctccattaagtatgagact 13228683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 52543041 - 52543094
Alignment:
Q  329 aaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactct 382  Q
    ||||||||||| |||||||| ||||||| ||||||||  |||||||||||||||    
T  52543041 aaactttaacttacacttgacacattaatatctcttcctcaagtatgagactct 52543094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 48683229 - 48683181
Alignment:
Q  315 ttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctct 363  Q
    |||| |||||||||||||||||||||||| |||| ||||||| ||||||    
T  48683229 ttgctttcaatgtgaaactttaactcacatttgacacattaacatctct 48683181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 356
Target Start/End: Complemental strand, 36697823 - 36697772
Alignment:
Q  305 acatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaa 356  Q
    |||| ||||||||||| ||||||| |||||||||||||| |||| |||||||    
T  36697823 acatctacttttgcatccaatgtggaactttaactcacatttgatacattaa 36697772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 50158254 - 50158196
Alignment:
Q  305 acatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctct 363  Q
    |||| |||| ||||||  ||||||||||||||||||| |||||| ||||||| ||||||    
T  50158254 acatatactcttgcataaaatgtgaaactttaactcatacttgacacattaacatctct 50158196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000008; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 1599765 - 1599690
Alignment:
Q  289 cacttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctct 363  Q
    ||||||||||||| || |||| |||| ||||||||||||||  | |||||||||||||||| ||||||| ||||||    
T  1599765 cacttatatgtttctcaacatctactattgcattcaatgtgttattttaactcacacttgacacattaacatctct 1599690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 356
Target Start/End: Original strand, 31737164 - 31737287
Alignment:
Q  238 atttgacaccacatcttcacc--aaaccttaaggtattaggttt--gactcaaaacacttatatgtt-ttcgacatttacttttgcattcaatgtgaaac 332  Q
    ||||||||||||||||||||   ||| ||||| ||||||||| |  || ||| | ||||| |||||| ||| |||| |||| |||||| ||||||||||     
T  31737164 atttgacaccacatcttcacactaaatcttaatgtattaggtatatgaatcatatcacttgtatgttgttcaacatctactcttgcatccaatgtgaaat 31737263  T
Q  333 tttaactcacacttgaaacattaa 356  Q
    ||||||||||| |||| |||||||    
T  31737264 tttaactcacaattgacacattaa 31737287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 16707389 - 16707299
Alignment:
Q  290 acttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagac 379  Q
    |||||||||||| || ||||||||| || | | ||||||||||||| |||||||  |||| ||||||| |||| || | ||||||||||||    
T  16707389 acttatatgtttatcaacatttactcttacttccaatgtgaaacttcaactcacgtttgacacattaacatcttttattcaagtatgagac 16707299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 33350306 - 33350372
Alignment:
Q  289 cacttatatgtt-ttcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacatt 354  Q
    ||||||||| || ||| ||||||||| |||||||||||||| |||||||| | |||||||| |||||    
T  33350306 cacttatatattgttcaacatttactattgcattcaatgtggaactttaaataacacttgacacatt 33350372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 289 - 363
Target Start/End: Original strand, 50331962 - 50332037
Alignment:
Q  289 cacttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctct 363  Q
    ||||||||||||| || |||| |||| ||||||||||||||  | |||||||||||||||| ||||||| ||||||    
T  50331962 cacttatatgtttctcaacatctactattgcattcaatgtgttattttaactcacacttgacacattaacatctct 50332037  T

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Target: chr8 (Bit Score: 34; Significance: 0.000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 17871294 - 17871245
Alignment:
Q  307 atttacttttgcattcaatgtgaaactttaactcacacttgaaacattaa 356  Q
    ||||||| || |||||||||| |||||||||||||||||||| |||||||    
T  17871294 atttactcttacattcaatgtaaaactttaactcacacttgacacattaa 17871245  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 361
Target Start/End: Original strand, 42797289 - 42797362
Alignment:
Q  289 cacttatatgttt-tcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatct 361  Q
    ||||||||||||| || |||| |||| ||||||||||||||  | |||||||||||||||| ||||||| ||||    
T  42797289 cacttatatgtttctcaacatatactattgcattcaatgtgttattttaactcacacttgacacattaacatct 42797362  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 363
Target Start/End: Complemental strand, 45247840 - 45247787
Alignment:
Q  310 tacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctct 363  Q
    ||||||||||||||| ||  ||||||||||||||||||| | ||||||||||||    
T  45247840 tacttttgcattcaacgtagaactttaactcacacttgacatattaaaatctct 45247787  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 12159389 - 12159333
Alignment:
Q  195 aagtttaatgatcatattagactaagagaatccacataaatgaatttgacaccacat 251  Q
    |||||| || |||||||||||||||||||||| ||| || ||| |||||||||||||    
T  12159389 aagtttgatcatcatattagactaagagaatcaacacaagtgattttgacaccacat 12159333  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 40260533 - 40260479
Alignment:
Q  329 aaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactctc 383  Q
    ||||||||||| | |||||| ||||||| ||||||||  ||||||||||||||||    
T  40260533 aaactttaacttatacttgacacattaacatctcttcctcaagtatgagactctc 40260479  T

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Target: scaffold0216 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 29174 - 29242
Alignment:
Q  289 cacttatatgtt-ttcgacatttacttttgcattcaatgtgaaactttaactcacacttgaaacattaa 356  Q
    |||||||||||| ||  |||| ||||||||||| ||||||| |||||||||||||| |||| |||||||    
T  29174 cacttatatgttgtttaacatctacttttgcatccaatgtggaactttaactcacatttgatacattaa 29242  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 383
Target Start/End: Original strand, 95774 - 95846
Alignment:
Q  310 tacttttgcattcaatgtgaaactttaactcacacttgaaacattaaaatctcttctccaagtatgagactctc 383  Q
    ||||||||||| |||| ||||||||||| ||| |||||  ||||||| |||||  || ||||||||||||||||    
T  95774 tacttttgcatccaatctgaaactttaagtcaaacttg-tacattaacatctccccttcaagtatgagactctc 95846  T

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