View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15425_low_1 (Length: 540)

Name: NF15425_low_1
Description: NF15425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15425_low_1
NF15425_low_1
[»] chr5 (26 HSPs)
chr5 (209-540)||(30072417-30072747)
chr5 (125-400)||(12265003-12265280)
chr5 (317-445)||(18452417-18452545)
chr5 (145-254)||(20695217-20695325)
chr5 (98-400)||(16622012-16622317)
chr5 (144-448)||(17028654-17028962)
chr5 (182-439)||(25594109-25594371)
chr5 (25-324)||(18451531-18451833)
chr5 (120-209)||(30791243-30791332)
chr5 (25-400)||(17381303-17381683)
chr5 (120-254)||(18281605-18281738)
chr5 (144-254)||(20084084-20084193)
chr5 (128-301)||(22230287-22230457)
chr5 (203-433)||(26329532-26329764)
chr5 (137-233)||(12339447-12339542)
chr5 (164-247)||(15694640-15694722)
chr5 (120-254)||(24268679-24268810)
chr5 (120-254)||(24345309-24345440)
chr5 (192-238)||(31340817-31340863)
chr5 (301-385)||(25681048-25681132)
chr5 (146-245)||(7742306-7742403)
chr5 (301-384)||(18281792-18281875)
chr5 (312-390)||(18178585-18178663)
chr5 (137-238)||(20715183-20715283)
chr5 (164-245)||(25945834-25945914)
chr5 (161-252)||(22930554-22930645)
[»] chr6 (13 HSPs)
chr6 (9-248)||(13723150-13723387)
chr6 (118-373)||(30235763-30236017)
chr6 (109-450)||(19669997-19670342)
chr6 (129-238)||(9725588-9725696)
chr6 (124-238)||(17859878-17859992)
chr6 (128-254)||(30756224-30756353)
chr6 (196-370)||(16528117-16528296)
chr6 (120-254)||(15575533-15575663)
chr6 (182-254)||(26499310-26499381)
chr6 (190-238)||(32929934-32929982)
chr6 (128-254)||(16174753-16174879)
chr6 (346-400)||(13723840-13723894)
chr6 (341-426)||(12971971-12972056)
[»] chr3 (20 HSPs)
chr3 (109-400)||(19218576-19218872)
chr3 (148-426)||(10342165-10342449)
chr3 (49-393)||(19263209-19263558)
chr3 (120-254)||(14280683-14280816)
chr3 (131-439)||(2729000-2729302)
chr3 (129-252)||(8401807-8401929)
chr3 (120-248)||(26419343-26419471)
chr3 (149-238)||(28731049-28731138)
chr3 (128-254)||(11475444-11475569)
chr3 (120-254)||(18474791-18474925)
chr3 (125-254)||(19542490-19542618)
chr3 (118-254)||(27415706-27415840)
chr3 (341-400)||(16970882-16970941)
chr3 (120-239)||(21828593-21828712)
chr3 (16-99)||(25918573-25918656)
chr3 (176-238)||(18066272-18066334)
chr3 (163-220)||(21806119-21806176)
chr3 (310-392)||(11475300-11475382)
chr3 (125-254)||(22488268-22488395)
chr3 (120-232)||(11521787-11521898)
[»] chr1 (29 HSPs)
chr1 (83-392)||(34533074-34533388)
chr1 (109-393)||(30675871-30676157)
chr1 (109-357)||(50047566-50047820)
chr1 (125-427)||(11984619-11984925)
chr1 (118-232)||(11769393-11769507)
chr1 (109-252)||(23223966-23224108)
chr1 (125-238)||(52270619-52270733)
chr1 (137-238)||(19257374-19257475)
chr1 (276-406)||(25726214-25726348)
chr1 (276-406)||(25734622-25734756)
chr1 (26-389)||(18300339-18300708)
chr1 (190-393)||(26657935-26658139)
chr1 (120-254)||(21549237-21549367)
chr1 (165-238)||(14744884-14744957)
chr1 (182-254)||(15298327-15298398)
chr1 (190-254)||(25778324-25778387)
chr1 (138-390)||(9353409-9353662)
chr1 (138-248)||(9328591-9328699)
chr1 (120-230)||(30782294-30782403)
chr1 (128-201)||(25665189-25665262)
chr1 (341-406)||(27460497-27460562)
chr1 (163-266)||(26853758-26853858)
chr1 (120-254)||(12810747-12810879)
chr1 (128-238)||(23519139-23519248)
chr1 (165-238)||(23506379-23506452)
chr1 (138-238)||(9252077-9252176)
chr1 (120-230)||(15416431-15416543)
chr1 (330-390)||(23519340-23519400)
chr1 (25-69)||(34521654-34521698)
[»] chr7 (33 HSPs)
chr7 (129-438)||(21545260-21545568)
chr7 (139-423)||(23126536-23126823)
chr7 (109-390)||(20017429-20017712)
chr7 (157-400)||(4091918-4092166)
chr7 (144-254)||(5312196-5312305)
chr7 (125-252)||(3400417-3400543)
chr7 (34-392)||(20470083-20470442)
chr7 (190-425)||(5636616-5636857)
chr7 (137-244)||(11082138-11082242)
chr7 (34-238)||(23072921-23073126)
chr7 (120-254)||(24596389-24596522)
chr7 (125-231)||(30406182-30406288)
chr7 (128-232)||(26839604-26839707)
chr7 (137-230)||(2629937-2630029)
chr7 (345-400)||(26839793-26839848)
chr7 (192-254)||(7777558-7777619)
chr7 (120-233)||(9405254-9405366)
chr7 (316-400)||(7777683-7777767)
chr7 (163-238)||(315728-315802)
chr7 (128-251)||(7815898-7816019)
chr7 (144-239)||(22334702-22334796)
chr7 (320-448)||(9070814-9070942)
chr7 (118-230)||(20040216-20040327)
chr7 (125-201)||(21544291-21544367)
chr7 (192-247)||(20446807-20446861)
chr7 (128-254)||(7493866-7493990)
chr7 (128-252)||(11467482-11467605)
chr7 (137-246)||(18467104-18467213)
chr7 (320-393)||(10670133-10670206)
chr7 (120-233)||(21536942-21537055)
chr7 (345-393)||(3400267-3400315)
chr7 (120-227)||(7326379-7326487)
chr7 (126-198)||(9760743-9760815)
[»] chr2 (24 HSPs)
chr2 (34-254)||(9504501-9504721)
chr2 (34-254)||(9515867-9516087)
chr2 (128-426)||(21844226-21844527)
chr2 (128-426)||(21842597-21842900)
chr2 (120-250)||(25474596-25474724)
chr2 (120-254)||(25460508-25460641)
chr2 (125-254)||(14921488-14921615)
chr2 (25-407)||(21503878-21504264)
chr2 (129-250)||(18532942-18533061)
chr2 (125-233)||(20518659-20518766)
chr2 (137-232)||(35708374-35708468)
chr2 (190-250)||(17884028-17884087)
chr2 (190-254)||(30999357-30999420)
chr2 (163-230)||(1733712-1733778)
chr2 (87-233)||(27416622-27416767)
chr2 (167-249)||(18819272-18819353)
chr2 (137-254)||(24188596-24188712)
chr2 (129-238)||(41256774-41256882)
chr2 (128-250)||(21847865-21847986)
chr2 (129-224)||(23909064-23909158)
chr2 (326-400)||(15829536-15829610)
chr2 (120-238)||(27917437-27917555)
chr2 (129-238)||(16593180-16593288)
chr2 (153-225)||(19948946-19949017)
[»] chr8 (25 HSPs)
chr8 (34-394)||(32239708-32240069)
chr8 (137-400)||(15213170-15213431)
chr8 (167-426)||(16051739-16052004)
chr8 (25-426)||(24120669-24121071)
chr8 (345-445)||(23893494-23893595)
chr8 (167-250)||(6887645-6887728)
chr8 (120-247)||(29046699-29046824)
chr8 (144-254)||(30850471-30850580)
chr8 (137-251)||(5154365-5154476)
chr8 (148-254)||(13304987-13305091)
chr8 (125-254)||(12957096-12957224)
chr8 (124-248)||(13583010-13583133)
chr8 (128-238)||(11308234-11308343)
chr8 (125-254)||(18771520-18771648)
chr8 (341-392)||(5569790-5569841)
chr8 (120-254)||(11437987-11438119)
chr8 (128-254)||(28900727-28900850)
chr8 (132-233)||(24094764-24094864)
chr8 (130-254)||(24927258-24927382)
chr8 (341-385)||(24927475-24927519)
chr8 (128-232)||(27084973-27085077)
chr8 (128-249)||(28075082-28075204)
chr8 (166-232)||(30544341-30544407)
chr8 (163-211)||(27118198-27118246)
chr8 (137-212)||(28290779-28290851)
[»] chr4 (30 HSPs)
chr4 (118-296)||(26188296-26188474)
chr4 (129-425)||(12110732-12111029)
chr4 (120-252)||(29438012-29438143)
chr4 (120-250)||(9782494-9782622)
chr4 (128-253)||(10577047-10577172)
chr4 (144-233)||(31859313-31859402)
chr4 (320-400)||(15192667-15192747)
chr4 (128-227)||(9288538-9288637)
chr4 (192-254)||(12806423-12806484)
chr4 (190-254)||(47024215-47024278)
chr4 (137-252)||(19602366-19602480)
chr4 (132-254)||(1695310-1695430)
chr4 (144-238)||(5676794-5676888)
chr4 (128-238)||(39134190-39134300)
chr4 (120-390)||(17024322-17024593)
chr4 (155-232)||(21047796-21047873)
chr4 (347-439)||(34863884-34863976)
chr4 (362-425)||(5676646-5676709)
chr4 (120-234)||(20985007-20985121)
chr4 (128-254)||(33519619-33519744)
chr4 (137-238)||(4733306-4733407)
chr4 (130-206)||(7023630-7023707)
chr4 (310-390)||(21077716-21077796)
chr4 (301-384)||(19602227-19602310)
chr4 (129-254)||(24576924-24577045)
chr4 (120-254)||(51885214-51885347)
chr4 (176-254)||(15192815-15192891)
chr4 (137-230)||(18444816-18444907)
chr4 (366-394)||(25314884-25314912)
chr4 (341-445)||(47024368-47024472)
[»] scaffold0386 (2 HSPs)
scaffold0386 (144-406)||(11178-11445)
scaffold0386 (146-390)||(8150-8399)
[»] scaffold0186 (1 HSPs)
scaffold0186 (126-254)||(33144-33271)
[»] scaffold0650 (1 HSPs)
scaffold0650 (192-254)||(5201-5262)
[»] scaffold0190 (1 HSPs)
scaffold0190 (120-254)||(11059-11193)
[»] scaffold0282 (1 HSPs)
scaffold0282 (128-254)||(22021-22145)
[»] scaffold0362 (1 HSPs)
scaffold0362 (153-254)||(8245-8344)
[»] scaffold0855 (1 HSPs)
scaffold0855 (128-252)||(2424-2546)
[»] scaffold0847 (1 HSPs)
scaffold0847 (128-252)||(2589-2711)
[»] scaffold0624 (1 HSPs)
scaffold0624 (130-238)||(4607-4714)


Alignment Details
Target: chr5 (Bit Score: 308; Significance: 1e-173; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 209 - 540
Target Start/End: Complemental strand, 30072747 - 30072417
Alignment:
Q  209 aacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccccttgaac 308  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30072747 aacaaacatcataacaaaacaatag-aaaaatataccctagagagagtcaagatgaggttggaatcctgccttgaaactctgatgctttaccccttgaac 30072649  T
Q  309 tgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgt 408  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30072648 tgctagctttatgaatgaaaaataatgtgtacaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgt 30072549  T
Q  409 tttagcttgaaaaacaagttgcaggcaatttatgcccacagtcgtgtgcaggagacgcctggggcagtggtaacactgcctcatgcgatagtggcacatg 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30072548 tttagcttgaaaaacaagttgcaggcaatttatgcccacagtcgtgtgcatgaggcgcctggggcagtggtaacactgcctcatgcgatagtggcacatg 30072449  T
Q  509 agacagtccctgtgtgtgaaatcttgcgtttt 540  Q
    ||||||||||||||||||||||||||||||||    
T  30072448 agacagtccctgtgtgtgaaatcttgcgtttt 30072417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 400
Target Start/End: Original strand, 12265003 - 12265280
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    |||| |||||| ||||| ||||||||  ||||||||  ||||||||| || ||||| ||||||| |||||||||||| |||||||| | ||||||| |||    
T  12265003 aatataaactttattaagagaatccattaaataagaaggggttcatcttataaccctaatcaaagaggtttagttgctcatgacaatacacatcattaca 12265102  T
Q  225 aaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttacc----ccttgaactgctagctttat 320  Q
    |||||||| ||||||||||| |||||||||  |||||  |||  | |||||| ||||| ||||||||||||| |||    |||||||| ||| ||||| |    
T  12265103 aaacaata-gaaaaatatacactagagaga-acaagagaaggaagaaatcctaccttgaaactctgatgcttgaccattaccttgaaccgctggctttct 12265200  T
Q  321 gaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
     |||||| |||| |||||  |||| |||||  |||||  |||| |||||||||||||||| |||||||||||||| ||||    
T  12265201 aaatgaataatattgtgtgcaaggatctcttattatagcaaataattacttaaggtttaaaagaagaaaactgagatttt 12265280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 317 - 445
Target Start/End: Original strand, 18452417 - 18452545
Alignment:
Q  317 ttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagctt 416  Q
    ||||||||||| ||||||||||  ||| ||||||||||| |  ||||||| ||||||||||||||||||||||| |  |||||| |||||||||||||||    
T  18452417 ttatgaatgaataataatgtgtgcaagagtctctatttacaacaaatgatcacttaaggtttaagagaagaaaatttggctttttccaccgttttagctt 18452516  T
Q  417 gaaaaacaagttgcaggcaatttatgccc 445  Q
    |||||||||| ||||| ||||||||||||    
T  18452517 gaaaaacaagctgcagacaatttatgccc 18452545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 20695325 - 20695217
Alignment:
Q  145 aatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatatac 244  Q
    ||||||| ||||||||  |||||||||||||||||| ||||||| || |||||||||||||| || || ||||||| ||||||||||| |||||| ||||    
T  20695325 aatccaacaaataagaaggggttcatcgtagaaccctaatcaaagagttttagttgcacatggcagcatacatcattacaaaacaata-gaaaaacatac 20695227  T
Q  245 cctagagaga 254  Q
    ||||||||||    
T  20695226 cctagagaga 20695217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 98 - 400
Target Start/End: Original strand, 16622012 - 16622317
Alignment:
Q  98 aatcagacacaaagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttag 197  Q
    |||||||||||| |||||  |||||| |||| |||||| ||||||  ||||||| ||| ||||  |||||| || | |||||| ||| ||| ||||||||    
T  16622012 aatcagacacaa-gaaaaacataactgaatataaactttattaatgaaatccaacaaacaagaa-gggttcttcttcgaaccctaattaaagaggtttag 16622109  T
Q  198 ttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atcct--gccttggaactctgatgc 294  Q
    ||||||||||||||| ||  ||||||||||||||| |||||| |||||||| |||||  |||||  ||| |||| | |||  | ||||||||||| ||||    
T  16622110 ttgcacatgacaacatacgccataacaaaacaata-gaaaaacataccctaaagaga-acaagagaaggatggagaccctcagtcttggaactctaatgc 16622207  T
Q  295 tttac----cccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaa 390  Q
    || ||     ||||||||  |||||||||||||| || || | | |||  ||| ||||||||||||| |  |||||||||||  ||||||||| ||||||    
T  16622208 ttgactcttgccttgaaccactagctttatgaataaataaaagtatgtgcaagagtctctatttataatgtatgattacttagagtttaagaggagaaaa 16622307  T
Q  391 ctgagctttt 400  Q
     |||||||||    
T  16622308 gtgagctttt 16622317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 144 - 448
Target Start/End: Complemental strand, 17028962 - 17028654
Alignment:
Q  144 gaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatata 243  Q
    |||||||| ||||||||   |||||||| ||||||||  |||||| |||||||||||||||||  |||| ||||||| ||||| ||||| ||||||||||    
T  17028962 gaatccaacaaataagaagaggttcatcttagaaccctgatcaaagaggtttagttgcacatggtaacatacatcattacaaatcaata-gaaaaatata 17028864  T
Q  244 ccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttacc----ccttgaactgctagcttta-tgaatgaaaaataatg-tg 337  Q
    ||||| |||||  |||| | |||  | ||| |||| ||| | |||||||| || |||    |||||||||| ||   ||| | |||||||||  ||| |     
T  17028863 ccctaaagaga-acaaggtaaggaagaaatactgcattgaagctctgatgtttgacccttgccttgaactgttaatgttactaaatgaaaaaacatgatt 17028765  T
Q  338 taaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaacaagttgcaggcaat 437  Q
     |||||||| ||||||||||  ||||||||||||| |||||||||||||||||||  | |||| ||||  ||||  ||||||||  ||  ||||||||||    
T  17028764 gaaaagggtatctatttatagaaaatgattacttagggtttaagagaagaaaactaggttttttccacaattttgacttgaaaactaaactgcaggcaat 17028665  T
Q  438 ttatgcccaca 448  Q
    || ||||||||    
T  17028664 ttctgcccaca 17028654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 182 - 439
Target Start/End: Original strand, 25594109 - 25594371
Alignment:
Q  182 aatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcc---tgc 278  Q
    ||||||| |||||||||| | |||  |||||||||||||||||||||||||| ||||| ||| | ||||||||  ||||| |||| || |  ||   | |    
T  25594109 aatcaaagaggtttagttactcattgcaacaaacatcataacaaaacaatag-aaaaacatatcttagagagaa-caagaggaggatgaagaccctcttc 25594206  T
Q  279 cttggaactctgatgctttaccc----cttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaag 374  Q
    |||||| |||||||| || ||||    |||||||  |||||||||| |||||| |||||| |||  |||||| |||||| |||  | ||| ||||||| |    
T  25594207 cttggagctctgatgtttaacccttgccttgaaccactagctttataaatgaataataatatgttcaagggtgtctattgatagcatatgcttacttagg 25594306  T
Q  375 gtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaacaagttgcaggcaattt 439  Q
    |||||||||||||||| || || ||| ||||||||| | ||||||||||||| | | ||||||||    
T  25594307 gtttaagagaagaaaagtgggccttttccaccgtttcatcttgaaaaacaagctacgggcaattt 25594371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 324
Target Start/End: Original strand, 18451531 - 18451833
Alignment:
Q  25 tacggatcgattttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaatt--aatcagacacaaagaaaatgataac 122  Q
    |||||||| ||||||||||||||||||||  ||||| ||||||||  | |||||| | ||||||||||  |||  |||| |||| |   ||||  |||||    
T  18451531 tacggatcaattttcaagattattgatacgaattcttaattgaaaaagcattaagcacaagcaagaacttatttaaatcggacatagt-aaaagcataac 18451629  T
Q  123 ttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataa 222  Q
    |  || ||||||| ||| |  |||||||| ||||||||  ||||||||| ||  |||| ||| ||| |||||||||||| ||||| |||| |||| | ||    
T  18451630 tggattaaaactttattgactgaatccaacaaataagaaagggttcatcttatcaccctaattaaagaggtttagttgctcatgaaaacagacataaaaa 18451729  T
Q  223 caaaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccc----cttgaactgctagcttt 318  Q
    |||||||||| |||||| ||| ||||||||||  ||||| |||| || |||| || ||| ||||| |||||||| ||||    ||||||| |||||||||    
T  18451730 caaaacaata-gaaaaacatatcctagagaga-acaagaagaggatgaaatcatgtcttagaactttgatgcttgacccttgacttgaaccgctagcttt 18451827  T
Q  319 atgaat 324  Q
     |||||    
T  18451828 ctgaat 18451833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 30791332 - 30791243
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgaca 209  Q
    |||| ||||||||||| |||||| |||||||||||||||||  |||||  |||| ||||||  |||||| ||||||||||||||||||||    
T  30791332 aactgaataaaaactttattaattgaatccaaaaaataagaaggggtttctcgtggaaccctgatcaaagaggtttagttgcacatgaca 30791243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 400
Target Start/End: Original strand, 17381303 - 17381683
Alignment:
Q  25 tacggatcgattttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataact 123  Q
    |||||||| ||||||||| |||   ||||  ||||||||||||||    |||||||| | ||||| || |||||| |||||||||| |||||  |||  |    
T  17381303 tacggatcaattttcaagtttaccaatacgaattctcaattgaaaaaacattaagaacatgcaagtacaaattaaatcagacacaa-gaaaagcatattt 17381401  T
Q  124 taataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataac 223  Q
     ||| ||||||| |||||| |||||||| ||||||||  || |||||| |  || | |||| ||| ||||||||||||| ||| ||||||||||||| |     
T  17381402 gaatgaaaactttattaattgaatccaacaaataagaagggattcatcttgaaaactaaattaaagaggtttagttgcatatggcaacaaacatcattat 17381501  T
Q  224 aaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atc--ctgccttggaactctgatgctttacccct----tgaactgctagct 316  Q
    |||||||||  ||| | ||||||||||||||  ||| | |||| |||| |||  ||||||| ||||||  |||  | |||| |    ||||| | || ||    
T  17381502 aaaacaata-taaatacataccctagagaga-acaaaaggaggatggagatcctctgccttagaactcaaatgtgtgacccttgctctgaaccgttatct 17381599  T
Q  317 ttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    || ||||| || || |||||||  ||||||||||||||||| |  |||||||| ||  ||||||||||||||||||||| ||||    
T  17381600 ttttgaataaataaaaatgtgtgtaagggtctctatttataatgtatgattacatagtgtttaagagaagaaaactgagttttt 17381683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 18281605 - 18281738
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||   ||||| |||| |||| | ||||||| |||||||||| | |||| ||||  ||||||    
T  18281605 aactaaataaaacctttattaatagaatccaacaaataagaagtggttcgtcgtggaacgctaatcaaagaggtttagttactcatggcaaccgacatca 18281704  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    |  || || |||| |||||||||||||||||||||    
T  18281705 ttgcataaaaata-gaaaaatataccctagagaga 18281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 20084193 - 20084084
Alignment:
Q  144 gaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatata 243  Q
    |||||||| ||||||||  ||||||||| | |||||| ||||||| || ||||||||||||||  ||||| |||||| |||||| ||||  ||||| |||    
T  20084193 gaatccaacaaataagaaggggttcatcatggaaccctaatcaaagagatttagttgcacatggtaacaaccatcattacaaaataata-taaaaacata 20084095  T
Q  244 ccctagagaga 254  Q
    |||||||||||    
T  20084094 ccctagagaga 20084084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 301
Target Start/End: Complemental strand, 22230457 - 22230287
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| ||||||| | ||||| |||||  |  ||||||||||| |||| | ||| ||| |||||||||||| | ||  |||||||||||||| ||||    
T  22230457 aaaaactttattaataaattccaacaaatagcaaggggttcatcgtggaactctaataaaaaaggtttagttgctcgtggaaacaaacatcataagaaaa 22230358  T
Q  228 caataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccc 301  Q
    || || |||||| |||||||||| |||  ||| |  ||| | ||||| ||||||||||||||||||||| ||||    
T  22230357 cagta-gaaaaacataccctagataga-acaaaagaaggat-gaatcatgccttggaactctgatgcttgaccc 22230287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 433
Target Start/End: Original strand, 26329532 - 26329764
Alignment:
Q  203 catgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttacc-- 300  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||||||| |  ||||  |||  | |||||||||||| | |||| |||||| |||      
T  26329532 catggcaacaaacatcataacaaaacaata-gaaaaacataccctagagag-gataagagaaggaagaaatcctgccttgaagctctaatgcttgaccct 26329629  T
Q  301 --ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctt 398  Q
      ||||||||   |||  || |  ||| ||||||||| ||  |||||  ||||||||||  ||| ||||   || |||||| ||||||||||||||||||    
T  26329630 tgccttgaaccattagtgttctatatggaaaataatgagtgcaagggcatctatttatagcaaacgattgggtagggtttaggagaagaaaactgagctt 26329729  T
Q  399 ttaccaccgttttagcttgaaaaacaagttgcagg 433  Q
    ||  ||||| |  |||||| |||||||||||||||    
T  26329730 tttgcaccgatccagcttggaaaacaagttgcagg 26329764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 12339447 - 12339542
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaatag 233  Q
    ||||||| | ||||| ||||||||  ||||||||||| |||||| ||||||  ||| |||||||| |||| ||||||| |||||||||||| |||||    
T  12339447 attaataaattccaataaataagaaggggttcatcgtggaaccctaatcaag-aggattagttgctcatggcaacaaagatcataacaaaataatag 12339542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 15694640 - 15694722
Alignment:
Q  164 ggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccct 247  Q
    ||||||| || |||||| ||||||| ||||||| || |||||| ||||  ||||||| ||||||||||| ||||||||||||||    
T  15694640 ggttcattgtggaaccctaatcaaagaggtttaatttcacatggcaactgacatcattacaaaacaata-gaaaaatataccct 15694722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 24268810 - 24268679
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| ||||||| ||||| ||||||||| ||||||||  ||||||||  | ||| || ||||||  |||||||||||| |||| ||| | ||||||    
T  24268810 aactaaatgaaaactttattaacagaatccaacaaataagaa-gggttcattttggaatcctaatcaag-aggtttagttgctcatggcaatatacatca 24268713  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    |||||||||||||  ||||| |||||||| |||||    
T  24268712 taacaaaacaata-taaaaacataccctaaagaga 24268679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 24345440 - 24345309
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| ||||||| ||||| ||||||||| ||||||||  ||||||||  | ||| || ||||||  |||||||||||| |||| ||| | ||||||    
T  24345440 aactaaatgaaaactttattaacagaatccaacaaataagaa-gggttcattttggaatcctaatcaag-aggtttagttgctcatggcaatatacatca 24345343  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    |||||||||||||  ||||| |||||||| |||||    
T  24345342 taacaaaacaata-taaaaacataccctaaagaga 24345309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 31340817 - 31340863
Alignment:
Q  192 gtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  31340817 gtttagttgcacatgacaacatacatcattacaaaacaatagaaaaa 31340863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 385
Target Start/End: Complemental strand, 25681132 - 25681048
Alignment:
Q  301 ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaa 385  Q
    ||||||||  |||||||| ||||| |  ||||||||||  ||| |||||||||||||  |||||||| |||| ||||||||||||    
T  25681132 ccttgaaccactagctttctgaataattaataatgtgtgcaagtgtctctatttatagcaaatgatttcttagggtttaagagaa 25681048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 7742306 - 7742403
Alignment:
Q  146 atccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatatacc 245  Q
    |||||| ||||||||  ||||||||| | |||||| ||| ||| | ||||||||||||||||||||  ||||||| | |||||| || ||||||||||||    
T  7742306 atccaacaaataagaa-gggttcatcttggaaccctaattaaagaagtttagttgcacatgacaacggacatcattagaaaacagta-gaaaaatatacc 7742403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 384
Target Start/End: Original strand, 18281792 - 18281875
Alignment:
Q  301 ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagaga 384  Q
    ||||| |||||||||||| |||||||| || |  ||||  ||||||| |||||||||||  ||||||||||| || ||||||||    
T  18281792 ccttgcactgctagctttctgaatgaagaaaagagtgtgcaagggtcactatttatattgcatgattacttaggggttaagaga 18281875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 18178663 - 18178585
Alignment:
Q  312 tagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaa 390  Q
    ||||||| |||||||| || || ||||  ||||||||||||| |||||  || |||||||| || ||||||||||||||    
T  18178663 tagctttttgaatgaataaaaaagtgtgcaagggtctctattgatattgcatcattacttaggggttaagagaagaaaa 18178585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 238
Target Start/End: Complemental strand, 20715283 - 20715183
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaa 236  Q
    |||||||  |||||| ||||||||  | ||||||| |  ||||| ||||||  |||||| ||||| || |||||||||||||| ||||||||||||| ||    
T  20715283 attaataatatccaacaaataagaaagagttcatcttgaaaccctaatcaag-aggtttggttgctcaagacaacaaacatcaaaacaaaacaatagaaa 20715185  T
Q  237 aa 238  Q
    ||    
T  20715184 aa 20715183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 25945914 - 25945834
Alignment:
Q  164 ggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatatacc 245  Q
    |||||||| |||||||  ||||||||||| ||||||| |||||| |||  ||||||| |||||| ||||  |||||||||||    
T  25945914 ggttcatcttagaaccttaatcaaataggcttagttgtacatgataaccgacatcattacaaaataata-aaaaaatatacc 25945834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 22930645 - 22930554
Alignment:
Q  161 ttgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagaga 252  Q
    ||||||||||||| |||||  |||||| | |||||| |||||||| || | || ||||||| ||||||||||| |||||| ||| ||||||||    
T  22930645 ttgggttcatcgtggaaccttaatcaagagaggttttgttgcacacgatagcatacatcattacaaaacaata-gaaaaacataacctagaga 22930554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-101; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 13723150 - 13723387
Alignment:
Q  9 taattctactaatatgtacggatcgattttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaatcagacaca 108  Q
    |||| |||| ||| |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13723150 taatcctacaaatttgtacggatcgattttcaagattactgttactgattttcaattgaaagcgtattaagaaaaagcaagaacgaattaatcagacaca 13723249  T
Q  109 aagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgac 208  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  13723250 a-gaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattggattcatcgtagaacccaaatcaaattgatttagttgcacatgac 13723348  T
Q  209 aacaaacatcataacaaaacaataggaaaaatatacccta 248  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  13723349 aacaaacatcataacaaaacaata-gaaaaatatacccta 13723387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 118 - 373
Target Start/End: Original strand, 30235763 - 30236017
Alignment:
Q  118 ataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacat 217  Q
    ||||||||||| |||||| ||||||||||| ||| |||||||| || ||||||| ||||||||  ||||||  ||||||||||| || ||||||| ||||    
T  30235763 ataacttaatataaactttattaatagaattcaacaaataagaatgagttcatcttagaaccctgatcaaagtggtttagttgctcaagacaacatacat 30235862  T
Q  218 cataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccc----cttgaactgcta 313  Q
    |||   ||||||||| |||||| ||||||||||||||  ||||| ||||  | |||||| ||||  |||||||||| || ||||    ||||||| ||||    
T  30235863 cat---aaaacaata-gaaaaacataccctagagaga-acaagaggaggaagaaatcctaccttaaaactctgatgtttgacccttttcttgaaccgcta 30235957  T
Q  314 gctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaa 373  Q
    | ||| ||||| ||||||||||||| ||| |||||| |||||||  | ||||||||||||    
T  30235958 gttttctgaataaaaaataatgtgtgaaacggtctcaatttatagcatatgattacttaa 30236017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 109 - 450
Target Start/End: Original strand, 19669997 - 19670342
Alignment:
Q  109 aagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgac 208  Q
    |||||||| |||| | ||| ||||||| |||||| |||||||| ||| || |  ||||||||| ||||| || || |||| |||||||||||| ||||||    
T  19669997 aagaaaatcataattgaatgaaaactttattaatcgaatccaacaaaaaataa-gggttcatcttagaatcctaaacaaagaggtttagttgctcatgac 19670095  T
Q  209 aacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcctgc--cttg-gaactctgatgctttaccc---- 301  Q
    |||||| |||||||||||| ||||  ||||| ||||||||||||||  || |  |||| |||| | || |  | || |||||||||||||| |||         
T  19670096 aacaaaaatcataacaaaataatat-aaaaacataccctagagagaa-cagggggaggatggagttcttctacatgtgaactctgatgcttgacctttgt 19670193  T
Q  302 cttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttta 401  Q
    |||  |||  ||||||| | |||||| |||||||| | |||| ||||||| ||||| ||  |||||||||| | |||||| || ||||| || ||  ||     
T  19670194 cttatactagtagctttctaaatgaataataatgtctgaaagagtctctaattatagtatttgattacttaggatttaagtgaggaaaattgggcgattt 19670293  T
Q  402 ccaccgttttagcttgaaaaacaagttgcaggcaatttatgcccacagt 450  Q
    ||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  19670294 ccaccgttttagcttgaaaaagaagttgcaggaaatttatgtccacagt 19670342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 9725588 - 9725696
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaac 228  Q
    |||||||  |||||| | ||||| ||||||||  ||||||||||| |||||| ||||||  ||||||| |||| |||||||||| |||||||||||||||    
T  9725588 aaaacttttttaataaattccaacaaataagaaggggttcatcgtggaaccctaatcaag-aggtttaattgctcatgacaacagacatcataacaaaac 9725686  T
Q  229 aataggaaaa 238  Q
    ||||| ||||    
T  9725687 aatagaaaaa 9725696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 17859878 - 17859992
Alignment:
Q  124 taataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataac 223  Q
    |||| ||||||| |||||| |||||||| ||||||||  | ||||||| | |||| | ||||||| || |||||||||||||| ||||||| || || ||    
T  17859878 taattaaaactttattaattgaatccaacaaataagaaggtgttcatcttggaactctaatcaaagagttttagttgcacatggcaacaaatatgattac 17859977  T
Q  224 aaaacaataggaaaa 238  Q
    |||||||||| ||||    
T  17859978 aaaacaatagaaaaa 17859992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 254
Target Start/End: Complemental strand, 30756353 - 30756224
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacatcataacaaa 226  Q
    |||||||| |||||| |||| ||| |||||| | | |||| ||| | |||||| |||||| | ||||||||||||||||||||||| ||||||| |||||    
T  30756353 aaaaactttattaattgaatacaacaaataaaaataggtttatcttggaaccctaatcaagaaaggtttagttgcacatgacaacatacatcattacaaa 30756254  T
Q  227 acaat--aggaaaaatataccctagagaga 254  Q
    |||||  | |||||| |||| |||||||||    
T  30756253 acaatacaagaaaaacatacactagagaga 30756224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 370
Target Start/End: Complemental strand, 16528296 - 16528117
Alignment:
Q  196 agttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atc--ctgccttggaactctgat 292  Q
    ||||||||||||||| | |||||||||||||||||||  ||||| ||||||||||||||  ||||| |||| || | |||  ||||||||||||||  ||    
T  16528296 agttgcacatgacaatagacatcataacaaaacaata-caaaaacataccctagagaga-acaagaggaggatgaagatcctctgccttggaactccaat 16528199  T
Q  293 gctttacc----ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattact 370  Q
    |||| |||    ||||||||  |||||||| | |||||| ||||||||||  || ||||||||||||||  | |||||||||    
T  16528198 gcttgaccctttccttgaacaactagctttctaaatgaataataatgtgtgcaatggtctctatttatagcacatgattact 16528117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 15575663 - 15575533
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||||||| ||||||| | ||||||   |||||  ||||||||||| |||||| ||||||  ||| |||||||| |||| ||||||||||||    
T  15575663 aactaaataaaaactttattaataaattccaaat--taagaaggggttcatcgtggaaccctaatcaag-aggcttagttgctcatggcaacaaacatca 15575567  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    ||| ||||||||| ||| || |||||| |||||||    
T  15575566 taagaaaacaata-gaataacatacccaagagaga 15575533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 26499310 - 26499381
Alignment:
Q  182 aatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    ||||||| || ||||||||||||||||||||||||| || ||||| |||||  ||||| ||||| ||||||||    
T  26499310 aatcaaagagatttagttgcacatgacaacaaacataattacaaagcaata-taaaaacataccttagagaga 26499381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 32929934 - 32929982
Alignment:
Q  190 aggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    ||||||||||| ||||||||||||||||| | |||||||||||| ||||    
T  32929934 aggtttagttgtacatgacaacaaacatcgttacaaaacaatagaaaaa 32929982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 254
Target Start/End: Original strand, 16174753 - 16174879
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacatcataacaaa 226  Q
    |||||||| |||||| |||||||| ||||||||  ||| ||||  | ||| || |||||| | || ||||||||||||||  |||| ||||||| | |||    
T  16174753 aaaaactttattaattgaatccaagaaataagaaaggggtcatattggaatcctaatcaagagagatttagttgcacatggtaacatacatcattataaa 16174852  T
Q  227 acaataggaaaaatataccctagagaga 254  Q
    | |||| |||||||||||| ||||||||    
T  16174853 ataata-gaaaaatataccgtagagaga 16174879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 400
Target Start/End: Original strand, 13723840 - 13723894
Alignment:
Q  346 tctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    ||||||||||||  | ||||||| ||| |||||||||||||||||||| ||||||    
T  13723840 tctctatttatagcatatgattaattagggtttaagagaagaaaactgggctttt 13723894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 12971971 - 12972056
Alignment:
Q  341 aagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaacaag 426  Q
    ||||||||||||||||| |  || ||||| || || ||||| ||||||||||| ||||||  ||||| |  |||||||||||||||    
T  12971971 aagggtctctatttatagtgcatcattacgtaggggttaagggaagaaaactgggctttttgcaccggtccagcttgaaaaacaag 12972056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 109 - 400
Target Start/End: Original strand, 19218576 - 19218872
Alignment:
Q  109 aagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgac 208  Q
    |||||||  |||||| ||||||||  | |||||| |||||||| ||||||||   | |||||  |||||||| ||||||| |||||||||||||||||||    
T  19218576 aagaaaaatataactgaataaaaaaattattaatggaatccaacaaataagaaaagcttcatgttagaaccctaatcaaagaggtttagttgcacatgac 19218675  T
Q  209 aacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga---atcctgccttggaactctgatgctttaccc---- 301  Q
    |||| || ||||||||||||||||| ||||  |||| |||||||||  ||||| |||| ||||   |  |||||||| ||||||||||||| ||||        
T  19218676 aacatacttcataacaaaacaatagaaaaaggatactctagagagaa-caagaggaggatggagatactctgccttg-aactctgatgcttgacccttgt 19218773  T
Q  302 cttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    ||||||| | ||||||||| |||||| || |||||||| |||||||||||||||||  | |||||||||||||||||||||||||||||||| ||||||    
T  19218774 cttgaaccgttagctttattaatgaataagaatgtgtacaagggtctctatttatagaatatgattacttaaggtttaagagaagaaaactgggctttt 19218872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 148 - 426
Target Start/End: Complemental strand, 10342449 - 10342165
Alignment:
Q  148 ccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccct 247  Q
    |||| ||||||||  | ||||||| |||||||| || |||| |||| ||||| | |||||||||| |||||||||||||| ||||| |||||||||||||    
T  10342449 ccaacaaataagaaggtgttcatcttagaaccctaaccaaagaggtgtagtttctcatgacaacatacatcataacaaaataatag-aaaaatataccct 10342351  T
Q  248 agagagagtcaagatgaggttggaa-tc--ctgccttggaa-ctctgatgctttacccc----ttgaactgctagctttatgaatgaaaaataatgtgta 339  Q
    |||||||  ||||| |||| ||||| ||  |||||||| || |||||||| || ||||     ||||||  ||| |||| ||||| || |||||| |||     
T  10342350 agagagaa-caagaggaggatggaaatcatctgccttgaaaactctgatgtttgaccctcgctttgaaccactaactttctgaattaataataatatgtg 10342252  T
Q  340 aaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaacaag 426  Q
     ||| |||| |||||||| |||||||||||||| ||||||||||||||||||| || |||| |||||||||||||| ||||||||||    
T  10342251 caagagtctatatttatagtaaatgattacttagggtttaagagaagaaaactaagttttttccaccgttttagctagaaaaacaag 10342165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 393
Target Start/End: Original strand, 19263209 - 19263558
Alignment:
Q  49 gatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataacttaataaaaacttcattaatagaat 147  Q
    ||||| ||||||| |||||||  | |||||| | |  |||||||||||||| || ||||||| |||||  |||||| ||||||||| | |||| ||||||    
T  19263209 gatacggattctcgattgaaaaagcattaagcacagacaagaacgaattaaatcggacacaa-gaaaagcataactgaataaaaacattattactagaat 19263307  T
Q  148 ccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccct 247  Q
    |||| ||||||||   |||||||| |||||||| ||||||| |||| ||||||||||| |||| ||||||||||||| |||||| | ||||  |||| ||    
T  19263308 ccaacaaataagaagaggttcatcttagaaccctaatcaaagaggtgtagttgcacattacaaaaaacatcataacagaacaatggaaaaaggatactct 19263407  T
Q  248 agagagagtcaagatgaggttgga-atc--ctgccttggaactctgatgctttaccc----cttgaactgctagctttatgaatgaaaaataatgtgtaa 340  Q
    |||||||   |||| |||| || | |||  || |||| |||||||||||||| | ||    ||||||||  ||||||| | |||||| || ||||||||     
T  19263408 agagaga-aaaagaggagggtgaagatcctctacctt-gaactctgatgcttgatccttatcttgaacttttagctttctaaatgaataagaatgtgtac 19263505  T
Q  341 aagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactg 393  Q
    |||  ||||| ||||||  | ||||| ||||| ||||||||||||||||||||    
T  19263506 aagcatctctttttatagaatatgatcacttagggtttaagagaagaaaactg 19263558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 14280683 - 14280816
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||||||| ||||||||||||||| ||||||||  ||||||||||| |||||  ||||||| ||||||||||||  ||| ||||  ||| ||    
T  14280683 aactgaataaaaactttattaatagaatccaacaaataagaaggggttcatcgtggaaccttaatcaaagaggtttagttgcttatggcaaccgacacca 14280782  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    | ||||| ||||| |||||| ||||||||||||||    
T  14280783 ttacaaagcaata-gaaaaacataccctagagaga 14280816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 131 - 439
Target Start/End: Original strand, 2729000 - 2729302
Alignment:
Q  131 aacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaa 230  Q
    ||||| |||||| |||||||| |||||| || | ||||||| || ||||| ||||||| |||||||||||  |||| |    |||||||||||||||||     
T  2729000 aactttattaattgaatccaacaaataaaatggagttcatcttataaccctaatcaaagaggtttagttgttcatggc----aacatcataacaaaacag 2729095  T
Q  231 taggaaaaatataccctagagagagtcaagatgaggttggaatc---ctgccttggaactctgatgctttacc----ccttgaactgctagctttatgaa 323  Q
    || |||||||||||| ||||||||  |||||||||| || |  |   ||||||| |||||||||||||| |||    ||||||||  |||||||| ||||    
T  2729096 ta-gaaaaatataccatagagaga-acaagatgaggatgaagaccatctgcctttgaactctgatgcttgacccttaccttgaacctctagctttctgaa 2729193  T
Q  324 tgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagc-ttttaccaccgttttagcttgaaaaa 422  Q
    ||   |||||||     |||| ||||||||||||  ||||  |||||| ||| ||| |||||||||| || || |||| |||| ||||||||||||||||    
T  2729194 tg---aataatg----caaggatctctatttatagcaaatagttactt-agggttatgagaagaaaaatgtgcttttttccactgttttagcttgaaaaa 2729285  T
Q  423 caagttgcaggcaattt 439  Q
     ||||||||||||||||    
T  2729286 taagttgcaggcaattt 2729302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 8401807 - 8401929
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaac 228  Q
    ||||||| |||||| |||||||| ||||||||  ||||||||||| |||||| ||| ||| | ||||||||||||||| ||||  |||| || |||||||    
T  8401807 aaaactttattaattgaatccaacaaataagaaggggttcatcgtggaaccctaataaaaaaagtttagttgcacatggcaaccgacattattacaaaac 8401906  T
Q  229 aataggaaaaatataccctagaga 252  Q
    ||||  ||||| ||||||||||||    
T  8401907 aata-taaaaacataccctagaga 8401929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 26419471 - 26419343
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaat-caaataggtttagttgcacatgacaacaaacatc 218  Q
    |||| ||| |||||||  ||||| |||||||| ||||||||  ||||||||||| |||||  ||| |||| | ||||||||||||||| |||| ||||||    
T  26419471 aactgaatgaaaacttttttaattgaatccaacaaataagaaggggttcatcgtggaaccgtaatacaaagatgtttagttgcacatggcaaccaacatc 26419372  T
Q  219 ataacaaaacaataggaaaaatatacccta 248  Q
    || ||||||||||| |||||| ||||||||    
T  26419371 attacaaaacaata-gaaaaacatacccta 26419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 28731049 - 28731138
Alignment:
Q  149 caaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    ||||||||||||  ||||||||||  |||||| ||||||| |||||||| | |||||||||||| ||||||| |||||||||||| ||||    
T  28731049 caaaaaataagaaggggttcatcgcggaaccctaatcaaagaggtttagctacacatgacaacatacatcattacaaaacaatagaaaaa 28731138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 254
Target Start/End: Complemental strand, 11475569 - 11475444
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||| |||| |||||||||| |  ||||||||||| |||||| ||| | | ||||||||||||| ||| ||||| | ||||| ||||||    
T  11475569 aaaaactttattaatggaatacaaaaaataacaaggggttcatcgtggaaccctaattagagaggtttagttgcagatggcaacatatatcattacaaaa 11475470  T
Q  228 caataggaaaaatataccctagagaga 254  Q
    |||||  ||||| ||||| ||||||||    
T  11475469 caata-taaaaacataccttagagaga 11475444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 18474925 - 18474791
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaa-aaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatc 218  Q
    |||| ||||||||| | ||||||| ||||||| |||| || |  ||||||||||| |||||  ||||||| |||||||||||| ||| | |||| |||||    
T  18474925 aactgaataaaaacattattaatacaatccaacaaaaaaataaggggttcatcgtggaaccataatcaaagaggtttagttgctcataaaaacagacatc 18474826  T
Q  219 ataacaaaacaataggaaaaatataccctagagaga 254  Q
    || ||||| ||||| |||||||| ||||| ||||||    
T  18474825 attacaaaccaata-gaaaaataaaccctggagaga 18474791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 19542490 - 19542618
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||||| | ||||||| ||||||| ||| || |  ||||||||||| |||||| ||||||| || ||||||||  ||| | |||||||||||| | |    
T  19542490 aataaaaacattattaatacaatccaacaaaaaataaggggttcatcgtggaaccctaatcaaagagatttagttgttcataaaaacaaacatcattata 19542589  T
Q  225 aaacaataggaaaaatataccctagagaga 254  Q
    ||  | || |||||||||||||||||||||    
T  19542590 aactagta-gaaaaatataccctagagaga 19542618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 27415840 - 27415706
Alignment:
Q  118 ataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacat 217  Q
    |||||| ||| ||||||| || ||| |||||||| ||||||||  ||||||||| ||||||| || || ||  ||||||||| | |||| ||| | |||     
T  27415840 ataactgaatgaaaactttataaattgaatccaacaaataagaaggggttcatcttagaacctaa-tcgaagcggtttagttactcatggcaatatacac 27415742  T
Q  218 cataacaaaacaataggaaaaatataccctagagaga 254  Q
    ||||||||||||||| |||||| |||||| |||||||    
T  27415741 cataacaaaacaata-gaaaaagataccccagagaga 27415706  T

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Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 400
Target Start/End: Complemental strand, 16970941 - 16970882
Alignment:
Q  341 aagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    |||||||||||||||||  | ||||||||||| ||||||||||||||||| |||| ||||    
T  16970941 aagggtctctatttatagcatatgattacttagggtttaagagaagaaaattgagttttt 16970882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 21828593 - 21828712
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||||  | |||||| |||||| ||||||||||   |||||||| | |||||   |||||| ||||||||||||||||| ||||  ||||||    
T  21828593 aactgaataaaaaaattattaattgaatcccaaaaataagaagaggttcatcatggaaccttgatcaaagaggtttagttgcacatggcaactgacatca 21828692  T
Q  220 taacaaaacaataggaaaaa 239  Q
    | || ||||||||| |||||    
T  21828693 ttaccaaacaatagaaaaaa 21828712  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 25918573 - 25918656
Alignment:
Q  16 actaatatgtacggatcgattttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa 99  Q
    |||||| | |||||||| |||||||||||||  ||||| |||||||||||||||  | |||||| | | |||||||||||||||    
T  25918573 actaatctatacggatcaattttcaagattaccgatacggattctcaattgaaaaagcattaagcacaggcaagaacgaattaa 25918656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 18066334 - 18066272
Alignment:
Q  176 aacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    ||||| ||||||| |||||||||||| |||||||| | || ||||||||||||||||| ||||    
T  18066334 aaccctaatcaaagaggtttagttgctcatgacaatatacgtcataacaaaacaatagaaaaa 18066272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 21806176 - 21806119
Alignment:
Q  163 gggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcat 220  Q
    ||||| ||| |||||||| || |||| ||||||||||||||||||||||| |||||||    
T  21806176 gggttaatcttagaaccctaaccaaagaggtttagttgcacatgacaacatacatcat 21806119  T

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Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 11475382 - 11475300
Alignment:
Q  310 gctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaact 392  Q
    ||||||||| |||||||| || |  ||||  ||| |||||||||||||||| || |||||||| || |||| |||||||||||    
T  11475382 gctagctttctgaatgaataaaagagtgtgcaagagtctctatttatattacatcattacttaggggttaaaagaagaaaact 11475300  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 22488268 - 22488395
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||||||| ||| || |||||| ||||||||||  | ||||||||| |||||  |||| || | |||||||| | ||||| |||  ||||||| |||    
T  22488268 aataaaaactttattcatggaatcc-aaaaataagaaggagttcatcgtggaaccataatcgaagaagtttagtttctcatgaaaaccgacatcattaca 22488366  T
Q  225 aaacaataggaaaaatataccctagagaga 254  Q
    |||||||  |||||| ||| ||||||||||    
T  22488367 aaacaat-tgaaaaacatatcctagagaga 22488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 11521898 - 11521787
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| |||| || ||||||| | ||||| ||||||||| | ||||| | | || ||| ||||||  |||||||||||| |||| ||||| ||||||    
T  11521898 aactgaatgaaaaatttattaataaattccaacaaataagatcgagttcaacatggatccctaatcaag-aggtttagttgctcatggcaacagacatca 11521800  T
Q  220 taacaaaacaata 232  Q
    ||| |||||||||    
T  11521799 taaaaaaacaata 11521787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 7e-41; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 83 - 392
Target Start/End: Complemental strand, 34533388 - 34533074
Alignment:
Q  83 aagcaagaacgaattaa-tcagacacaaagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaaccca 181  Q
    ||||||||||||||||| || ||||||| |||||  |||||| |||| ||| || |||||| |||||||| ||||||||  |||| |||| ||||||||     
T  34533388 aagcaagaacgaattaaatcggacacaa-gaaaagcataactgaatataaattttattaattgaatccaacaaataagaaggggtccatcttagaaccct 34533290  T
Q  182 aatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atc--ctgc 278  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||||||  |||||| ||||||||||||||  ||||| |||| || | |||  || |    
T  34533289 aatcaaagaggtttagttgcacatgacgacaaacatcataccaaaacaat-cgaaaaacataccctagagaga-acaagaggaggatgaagatcctcttc 34533192  T
Q  279 cttggaactctgatgctttacc----ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaag 374  Q
    |||| |||| |||||||| |||    | |||||||| ||| ||| | |||||| || |||||||  ||| |||||||||||||| | |||||||||||      
T  34533191 cttgaaactatgatgcttgacccgtgcattgaactgttagttttctaaatgaataagaatgtgtgcaagagtctctatttatatcatatgattacttaga 34533092  T
Q  375 gtttaagagaagaaaact 392  Q
    ||||||||||||||||||    
T  34533091 gtttaagagaagaaaact 34533074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 109 - 393
Target Start/End: Complemental strand, 30676157 - 30675871
Alignment:
Q  109 aagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgac 208  Q
    |||||||  |||||| ||| ||||||| |||||| |||||||| ||||||||  ||||||||| | |||||  ||||||  || || |||||| |||| |    
T  30676157 aagaaaagcataactgaatgaaaactttattaattgaatccaacaaataagaaggggttcatcttcgaaccttaatcaagaag-ttaagttgctcatggc 30676059  T
Q  209 aacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atcctgccttggaactctgatgctttaccc----ct 303  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||| |||| |||| ||||||||||| |||||||||||   || |    ||    
T  30676058 aacaaacatcataacaaaacaata-gaaaaacataccctagagagact-aagaggaggatggagatcctgccttgaaactctgatgcccgactcttgtct 30675961  T
Q  304 tgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactg 393  Q
    ||||   |||||| | ||||||||| |||||| ||  || ||||||||||||||  | ||||||||||| |||||||||||| |||||||    
T  30675960 tgaatctctagctctctgaatgaaatataatgagtgcaatggtctctatttatagcatatgattacttagggtttaagagaataaaactg 30675871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 109 - 357
Target Start/End: Complemental strand, 50047820 - 50047566
Alignment:
Q  109 aagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgac 208  Q
    |||||||| |||||| |||| |||||| |||||| |||||||| ||||||||  ||||||||| || ||| | ||||||| |||||||||||| |||| |    
T  50047820 aagaaaatcataactaaatagaaactttattaattgaatccaacaaataagaaggggttcatcttataactctaatcaaagaggtttagttgctcatggc 50047721  T
Q  209 aac-aaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-at--cctgccttggaactctgatgctttacc---- 300  Q
    ||| ||||||||| |||||||||||  ||||| ||||||||||||||  ||||| |||| |||| ||  ||| |||||||||||| ||| || |||        
T  50047720 aacaaaacatcattacaaaacaata-taaaaacataccctagagaga-acaagaggaggatggagatccccttccttggaactctaatgtttgacccttg 50047623  T
Q  301 ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttata 357  Q
    |||| ||| ||||||||||| |||||| |||||||||  ||||||||||||||||||    
T  50047622 ccttaaaccgctagctttataaatgaacaataatgtgagaaagggtctctatttata 50047566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 125 - 427
Target Start/End: Original strand, 11984619 - 11984925
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||||||| |||||| |||||||| ||||||||  ||||| ||| | |||||| ||||||| ||||||||||||||||| ||||| |||||||  ||    
T  11984619 aataaaaacttaattaatggaatccaacaaataagaaggggtttatctttgaaccctaatcaaagaggtttagttgcacatggcaacatacatcatcgca 11984718  T
Q  225 aaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atc--ctgccttggaactctgatgctttac----cccttgaactgctagctt 317  Q
    |||||| | |||||||||| | ||||||||  ||||| |||| |||| |||  ||||||||| |||||||||||| ||     ||||| || | ||||||    
T  11984719 aaacaa-aagaaaaatatatcttagagaga-acaagaggaggatggagatcctctgccttgg-actctgatgcttgacatttgccttgcaccgttagctt 11984815  T
Q  318 tatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttg 417  Q
    | |||||||| || |||||||  ||| |||| | ||||||  | ||||||||||  ||||||| |||||||||| ||  |||| |||||| |  ||||||    
T  11984816 tctgaatgaataagaatgtgtgcaagtgtctatttttataacatatgattacttgcggtttaaaagaagaaaaccgacatttttccaccgatccagcttg 11984915  T
Q  418 aaaaacaagt 427  Q
     |||||||||    
T  11984916 gaaaacaagt 11984925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 11769393 - 11769507
Alignment:
Q  118 ataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacat 217  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||  ||||||||| |||||||| ||| ||| |||||||||||||||||  ||||  |||    
T  11769393 ataacttaatagaaactttattaattgaatccaacaaataagaaggggttcatcttagaaccctaataaaaaaggtttagttgcacatggaaacattcat 11769492  T
Q  218 cataacaaaacaata 232  Q
    |||||||||||||||    
T  11769493 cataacaaaacaata 11769507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 23224108 - 23223966
Alignment:
Q  109 aagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgac 208  Q
    |||||||  |||||| |||| |||||| |||||  |||| ||| | ||||||  ||||||||| |||||||||||||||| ||||||| || | ||||||    
T  23224108 aagaaaagcataactgaatagaaactttattaactgaatgcaacatataagaaggggttcatcttagaacccaaatcaaagaggtttatttccgcatgac 23224009  T
Q  209 aacaaacatcataacaaaacaataggaaaaatataccctagaga 252  Q
    |||| ||||||| ||||||||||| |||||| ||||||||||||    
T  23224008 aacatacatcattacaaaacaata-gaaaaacataccctagaga 23223966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 52270619 - 52270733
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattggg-ttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataac 223  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| |||||||| |||||| ||||||||| |||||||| | |||| ||||  ||||||| ||    
T  52270619 aataaaaactttattaaaagaatccaaaaaataagaagggggttcatcgtggaaccctaatcaaataagtttagtttctcatggcaaccgacatcattac 52270718  T
Q  224 aaaacaataggaaaa 238  Q
    |||||||||| ||||    
T  52270719 aaaacaatagaaaaa 52270733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 19257374 - 19257475
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaa 236  Q
    |||||| |||||||| ||||||||  ||||||||| | |||||| ||||||| |||||||||||| |||||||||  ||||||| |||||||||||| ||    
T  19257374 attaattgaatccaacaaataagaaggggttcatcttggaaccctaatcaaagaggtttagttgctcatgacaaccgacatcattacaaaacaatagaaa 19257473  T
Q  237 aa 238  Q
    ||    
T  19257474 aa 19257475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 406
Target Start/End: Original strand, 25726214 - 25726348
Alignment:
Q  276 tgccttggaactctgatgctttacccct----tgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattactt 371  Q
    |||||||||||| |||||||| ||||||    ||||| ||||||||| |||||||| ||||||||||  || ||||| | ||||||  | ||||||||||    
T  25726214 tgccttggaactttgatgcttgacccctatcttgaaccgctagctttctgaatgaataataatgtgtgtaaaggtctttgtttataacatatgattactt 25726313  T
Q  372 aaggtttaagagaagaaaactgagcttttaccacc 406  Q
    | |||||||||||||||||| ||| |||| |||||    
T  25726314 agggtttaagagaagaaaacagagttttttccacc 25726348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 406
Target Start/End: Original strand, 25734622 - 25734756
Alignment:
Q  276 tgccttggaactctgatgctttacccct----tgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattactt 371  Q
    |||||||||||| |||||||| ||||||    ||||| ||||||||| |||||||| ||||||||||  || ||||| | ||||||  | ||||||||||    
T  25734622 tgccttggaactttgatgcttgacccctatcttgaaccgctagctttctgaatgaataataatgtgtgtaaaggtctttgtttataacatatgattactt 25734721  T
Q  372 aaggtttaagagaagaaaactgagcttttaccacc 406  Q
    | |||||||||||||||||| ||| |||| |||||    
T  25734722 agggtttaagagaagaaaacagagttttttccacc 25734756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 389
Target Start/End: Original strand, 18300339 - 18300708
Alignment:
Q  26 acggatcgattttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaatt--aatcagacacaaagaaaatgataact 123  Q
    ||||||| |||||||||||||| ||| | |||||| ||||||||  | |||||||| |  |||| |||||||  |||  ||| ||| |||||  ||||||    
T  18300339 acggatcaattttcaagattatcgatgcagattctaaattgaaaaagcattaagaacatacaagtacgaatttaaattggacccaa-gaaaaacataact 18300437  T
Q  124 taataaaaacttcattaa-tagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgca-catgacaacaaacatcata 221  Q
     ||| ||||||| ||||| | |||| ||| ||||||||  ||||||||| |||||||| || |||| || |||||||    |||| ||||| ||||||||    
T  18300438 gaatgaaaactttattaaattgaattcaacaaataagaaggggttcatcttagaaccctaagcaaagagttttagttttttcatggcaacatacatcata 18300537  T
Q  222 acaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atcctgccttggaactctgatgctttaccc----cttgaactgctagct 316  Q
    |||||||||||| ||||| |   ||| ||||||  |||    ||| || | |||||||||||||||| |||||||| ||||    ||||||| | | |||    
T  18300538 acaaaacaatag-aaaaacaagtcctggagagaa-caatggaaggatgaagatcctgccttggaactttgatgcttgacccttggcttgaaccgttggct 18300635  T
Q  317 ttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaa 389  Q
    || ||||| |||||||||||||  ||| || | ||||||||  | ||||||||||| ||||||||||||||||    
T  18300636 ttctgaataaaaaataatgtgtgcaagtgtttatatttataacatatgattacttagggtttaagagaagaaa 18300708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 190 - 393
Target Start/End: Complemental strand, 26658139 - 26657935
Alignment:
Q  190 aggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactct 289  Q
    |||||||||||| ||||||||||||||||| ||||||||||||  ||||| ||||||||||||||  |||||  | |  | |||| | ||||| | ||||    
T  26658139 aggtttagttgctcatgacaacaaacatcacaacaaaacaata--aaaaacataccctagagaga-acaagagaatgaagaaatcattccttgaagctct 26658043  T
Q  290 gatgctttacc----ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaa 385  Q
    ||||||| |||    ||||||||||| ||  || ||||| |||||||||| ||   ||||| ||||||||||  ||||||||   || |||||| |||||    
T  26658042 gatgcttgacccttgccttgaactgccagtgttctgaataaaaaataatgagtgctagggtatctatttataacaaatgattgggtagggtttaggagaa 26657943  T
Q  386 gaaaactg 393  Q
    ||||||||    
T  26657942 gaaaactg 26657935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 21549367 - 21549237
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||||||  ||||||||||||||| ||||||||  || |||||||| ||||||   | ||| || ||||||||  ||||||| |  ||||||    
T  21549367 aactgaataaaaactgtattaatagaatccaacaaataagaagggtttcatcgtggaaccc---taaaagagatttagttgttcatgacagccgacatca 21549271  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    | ||||||||||| |||||| ||||||||||||||    
T  21549270 ttacaaaacaata-gaaaaacataccctagagaga 21549237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 14744884 - 14744957
Alignment:
Q  165 gttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    ||||||| | |||||| | ||||| ||||||||||||||||||||||  ||||||| |||||||||||| ||||    
T  14744884 gttcatcttggaaccctagtcaaagaggtttagttgcacatgacaaccgacatcattacaaaacaatagaaaaa 14744957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 15298327 - 15298398
Alignment:
Q  182 aatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    ||||||| |||||||||||||||||| |||| ||||||| ||||||||| | |||||  ||||||||||||||    
T  15298327 aatcaaagaggtttagttgcacatgataacatacatcattacaaaacaa-aagaaaagcataccctagagaga 15298398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 25778387 - 25778324
Alignment:
Q  190 aggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    ||||||| |||||||| |||||||| ||||| ||||||||||| |||||| ||||||||||||||    
T  25778387 aggtttaattgcacataacaacaaatatcattacaaaacaata-gaaaaacataccctagagaga 25778324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 390
Target Start/End: Complemental strand, 9353662 - 9353409
Alignment:
Q  138 ttaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaa 237  Q
    |||||||||| ||| ||||||||  ||||||||| | || ||  ||||||| |||||||||||| ||||  || | |||||| |||||||||||| ||||    
T  9353662 ttaatagaattcaacaaataagaaagggttcatcttcgagccacaatcaaa-aggtttagttgctcatggaaatatacatcacaacaaaacaata-gaaa 9353565  T
Q  238 aatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccc----cttgaactgctagctttatgaatgaaaaataa 333  Q
    || |||||||| || ||  ||||| ||||  | |||| | |||   |||||||||| || ||||    ||||||  |  | |||| ||||||||||||||    
T  9353564 aacataccctaaaggga-acaagaagaggaagaaatcatacctaaaaactctgatgtttgacccttgtcttgaatcgtcaactttttgaatgaaaaataa 9353466  T
Q  334 tgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaa 390  Q
    || ||  |||||||| ||| ||||  ||||||||||||| | |||||||||||||||    
T  9353465 tgagtgcaagggtctttatatatagaaaatgattacttaggatttaagagaagaaaa 9353409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 9328699 - 9328591
Alignment:
Q  138 ttaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaa 237  Q
    |||||||||||||| ||||||||  ||||||||| | || ||  ||||||| |||||||||||| ||||  || | |||||| |||||||||||| ||||    
T  9328699 ttaatagaatccaacaaataagaaagggttcatcttcgagccataatcaaa-aggtttagttgctcatggaaatatacatcacaacaaaacaata-gaaa 9328602  T
Q  238 aatatacccta 248  Q
    || ||||||||    
T  9328601 aacatacccta 9328591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 30782403 - 30782294
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||||||| ||||||| | ||||| ||||||||  ||| ||||| | |||||  ||||||  | |||||||||| |||||||||| |||| |    
T  30782403 aactgaataaaaactttattaataaattccaacaaataagaaggggctcatcctggaaccttaatcaag-atgtttagttgctcatgacaacatacataa 30782305  T
Q  220 taacaaaacaa 230  Q
    |||||||||||    
T  30782304 taacaaaacaa 30782294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 25665189 - 25665262
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgc 201  Q
    |||||||| || |||||||| ||| ||||||||  ||||||||||| |||||  ||||||| ||||||||||||    
T  25665189 aaaaactttatcaatagaattcaacaaataagaaggggttcatcgtggaaccttaatcaaagaggtttagttgc 25665262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 27460497 - 27460562
Alignment:
Q  341 aagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccacc 406  Q
    ||||||||||||||||| |  || |||||||| || |||||||||||||||| ||||||| |||||    
T  27460497 aagggtctctatttatagtggatcattacttaggggttaagagaagaaaactaagctttttccacc 27460562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 26853758 - 26853858
Alignment:
Q  163 gggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagat 262  Q
    |||||||||||||||||  ||||||| ||||||| ||||||||| ||||| | ||||| | |||||||||  ||||| |||| |||||||| | ||||||    
T  26853758 gggttcatcgtagaaccataatcaaagaggtttacttgcacatg-caacatagatcattataaaacaata-taaaaacatactctagagag-gacaagat 26853854  T
Q  263 gagg 266  Q
    ||||    
T  26853855 gagg 26853858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 12810879 - 12810747
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| ||||||| ||||||   |||||| ||||||||  | ||||||| | |||||| ||||||  |||||| ||||| |||| |||||||| |||    
T  12810879 aactgaatgaaaactttattaattatatccaacaaataagaaggagttcatcatggaaccctaatcaag-aggttttgttgctcatggcaacaaacgtca 12810781  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    |||||||| |||| |||||  |||||||| |||||    
T  12810780 taacaaaataata-gaaaagcataccctaaagaga 12810747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 23519139 - 23519248
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||||  ||| || ||||||||  ||||||| | |||||||  ||| ||  |||||||||| | ||||  |||||||||||||||||||    
T  23519139 aaaaactttattaataagatcaaacaaataagaaagggttcaccttagaaccataattaag-aggtttagtttctcatggtaacaaacatcataacaaaa 23519237  T
Q  228 caataggaaaa 238  Q
    |||||| ||||    
T  23519238 caatagaaaaa 23519248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 23506452 - 23506379
Alignment:
Q  165 gttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    |||||| || |||||| ||| ||| | |||||||||||||| || || |||||||| |||||||||||| ||||    
T  23506452 gttcattgtggaaccctaataaaagatgtttagttgcacataactacgaacatcattacaaaacaatagaaaaa 23506379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 9252077 - 9252176
Alignment:
Q  138 ttaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaa 237  Q
    |||||| ||||||| ||||||||  ||||||||| |  |||||||||| || |||||||||||| ||||  |||| |||||  || |||||||||| |||    
T  9252077 ttaataaaatccaacaaataagaaggggttcatcttcaaacccaaatc-aagaggtttagttgctcatggaaacagacatctcaaaaaaacaatagaaaa 9252175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 15416431 - 15416543
Alignment:
Q  120 aacttaata-aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacat 217  Q
    ||||||||| ||||||| |||| | |||||||| |||||||    |||||||||| |||||| ||| || | |||||||||| |||||||||||  ||||    
T  15416431 aacttaatagaaaactttattagttgaatccaacaaataagtagaggttcatcgtggaaccctaattaatagaggtttagttacacatgacaaccgacat 15416530  T
Q  218 cataacaaaacaa 230  Q
    | | |||||||||    
T  15416531 ctttacaaaacaa 15416543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 23519340 - 23519400
Alignment:
Q  330 ataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaa 390  Q
    |||||||||  |||||||||||||||||  | ||| ||||||  |||||||||||||||||    
T  23519340 ataatgtgtgcaagggtctctatttatagcatatggttactttgggtttaagagaagaaaa 23519400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 34521698 - 34521654
Alignment:
Q  25 tacggatcgattttcaagattattgatactgattctcaattgaaa 69  Q
    |||||||| |||||||||||||| ||||| |||||||| ||||||    
T  34521698 tacggatcaattttcaagattatcgatacggattctcacttgaaa 34521654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 129 - 438
Target Start/End: Original strand, 21545260 - 21545568
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaac 228  Q
    ||||||| ||||||  ||||||| ||||||||  ||||||||| ||||| || ||||||| ||||||| ||||||||||  |||| ||||||||||||||    
T  21545260 aaaactttattaattaaatccaacaaataagaaggggttcatcttagaagcctaatcaaagaggtttacttgcacatga--acaatcatcataacaaaac 21545357  T
Q  229 aataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccc----cttgaactgctagctttatgaat 324  Q
    ||||  ||||| ||||||||||||||  ||||| ||   ||||||||  | || || || ||||| || ||||    ||||||  ||||||||| ||||     
T  21545358 aatat-aaaaacataccctagagagaa-caagaggataatggaatccaccattagatctttgatgtttgacccttgacttgaagcgctagctttctgaaa 21545455  T
Q  325 gaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaaca 424  Q
    ||| ||||||||||  | |||||||||||||||  ||||||||||||| || |||||||||||||| || |  ||| ||||||| |||||||||||||||    
T  21545456 gaataataatgtgtgtacgggtctctatttatagaaaatgattacttaggggttaagagaagaaaattg-gaattttccaccgtgttagcttgaaaaaca 21545554  T
Q  425 agttgcaggcaatt 438  Q
    |||||  |||||||    
T  21545555 agttgtgggcaatt 21545568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 139 - 423
Target Start/End: Complemental strand, 23126823 - 23126536
Alignment:
Q  139 taatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    |||| |||||||||||||||||  ||||||||| |||| ||| ||||||| ||| |||||| | |||| ||| |||||||||||||||||||||| ||||    
T  23126823 taattgaatccaaaaaataagaaggggttcatcttaga-ccctaatcaaagaggcttagttactcatggcaataaacatcataacaaaacaatag-aaaa 23126726  T
Q  239 atataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttacccctt----gaactgctagctttatgaatgaaaaataat 334  Q
    | | ||||||||||||| ||||  |||| | ||||| ||||||| ||||||||||||| |||| ||    ||||  ||| |||| ||||| |||||||||    
T  23126725 acaaaccctagagagag-caag--gaggatcgaatcatgccttgaaactctgatgcttgaccctttcctagaaccactaactttctgaataaaaaataat 23126629  T
Q  335 gtgtaaaagggtctctatttata----ttaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaac 423  Q
    | ||  ||| |||||||||||||     || ||||||||||| |||||||| |||| |||||  | |||| |||||||||  |||||||||||    
T  23126628 gagtgcaagtgtctctatttatagcatatatatgattacttagggtttaagtgaagtaaactaggttttttccaccgtttctgcttgaaaaac 23126536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 109 - 390
Target Start/End: Complemental strand, 20017712 - 20017429
Alignment:
Q  109 aagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgac 208  Q
    |||||||  |||||| ||| ||||||| || ||| ||||||||  |||||||  ||||||||| |||||||| |||||| ||||||||||||| ||||      
T  20017712 aagaaaaacataactgaatgaaaactttatcaattgaatccaaccaataagaaagggttcatcttagaaccctaatcaa-taggtttagttgctcatggt 20017614  T
Q  209 aacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atcctgccttggaactctgatgctttacc----cct 303  Q
    ||||| || ||||||||||||||| |||||| ||| || |||||||  ||||| || | || | |||||||||||||||| | ||| || |||    |||    
T  20017613 aacaaccaacataacaaaacaata-gaaaaacatagccaagagaga-acaagaggaagatgaagatcctgccttggaactttaatgtttgacccttgcct 20017516  T
Q  304 tgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaa 390  Q
    |||||  ||| ||||||||||||||||||||||||  || ||||| ||||| ||  | ||||||||||| ||||| |||||||||||    
T  20017515 tgaaccactaactttatgaatgaaaaataatgtgtgtaaaggtctttatttgtagcatatgattacttagggttttagagaagaaaa 20017429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 157 - 400
Target Start/End: Original strand, 4091918 - 4092166
Alignment:
Q  157 aagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagt 256  Q
    |||| |||||||||  |||||||| ||||||| ||||||||||||  ||| ||||| |||| ||||||||||||||| ||||| ||||| ||||||||      
T  4091918 aagaatgggttcatgttagaaccctaatcaaagaggtttagttgctaatggcaacatacattataacaaaacaatag-aaaaacatacc-tagagagaa- 4092014  T
Q  257 caagatgaggttgga-atcct--gccttggaac-tctgatgctttaccc----cttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtct 348  Q
    ||||| || | |||| |||||  |||||||||| |||||||||| ||||    ||| ||| ||||||||| |||||||| |||||||||| |||||||||    
T  4092015 caagaggaagatggagatcctctgccttggaacctctgatgcttgacccttgccttcaaccgctagctttctgaatgaataataatgtgtgaaagggtct 4092114  T
Q  349 ctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    |||||||||  | ||||||||||| |  | ||||| ||||||||||| ||||    
T  4092115 ctatttataacatatgattacttaggtctgaagagtagaaaactgagttttt 4092166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 5312196 - 5312305
Alignment:
Q  144 gaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatata 243  Q
    |||||||| |||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||  ||||||| ||||||||||  |||||| |||    
T  5312196 gaatccaacaaataagaatgggttcatcgtagaatcctaatcaaagaggtttagttgcacatgacaaccgacatcattacaaaacaat-tgaaaaacata 5312294  T
Q  244 ccctagagaga 254  Q
    |||||||||||    
T  5312295 ccctagagaga 5312305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 3400543 - 3400417
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||||||| | |||| |||||||| ||||||||  ||||||||| |||||||  ||||||| ||||||||||||||||| ||| ||| |||||||||    
T  3400543 aataaaaactttactaatcgaatccaagaaataagaaggggttcatcttagaaccttaatcaaagaggtttagttgcacatggcaataaaaatcataaca 3400444  T
Q  225 aaacaataggaaaaatataccctagaga 252  Q
    ||||||||  ||||| ||||||||||||    
T  3400443 aaacaata-taaaaacataccctagaga 3400417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 392
Target Start/End: Original strand, 20470083 - 20470442
Alignment:
Q  34 attttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataacttaataaaaa 132  Q
    |||||||||||||  ||||| |||||||| ||||||  | |||||| | ||||||||||||||||| ||  |||||| |||||  ||||||||||| |||    
T  20470083 attttcaagattaccgatacggattctcagttgaaaaagcattaagcacaagcaagaacgaattaaatcgaacacaa-gaaaac-ataacttaatataaa 20470180  T
Q  133 cttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacat--cataacaaaacaa 230  Q
    | | |||| | |||||||| |||||| |  || |  ||| || ||||| |||||||  ||||||||||  |||| ||| | ||||  |||||||||||||    
T  20470181 cattattagttgaatccaagaaataaaaagggctatatcttaaaaccctaatcaaagtggtttagttgttcatggcaatatacatatcataacaaaacaa 20470280  T
Q  231 taggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccc----cttgaactgctagctttatgaatga 326  Q
     || ||||  ||||||||||||||   |  |||||| || |||||| | | ||||||||||||||| ||||    ||||||| ||||||||| | |||||    
T  20470281 aag-aaaagcataccctagagaga---acaatgaggatgtaatcctccttaggaactctgatgcttaacccttgacttgaaccgctagctttctaaatga 20470376  T
Q  327 aaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaact 392  Q
    | |||||| ||| ||| ||||| ||||||||  | ||||||||||| ||||||| |||||||||||    
T  20470377 ataataatttgttaaatggtctttatttataacatatgattacttagggtttaatagaagaaaact 20470442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 190 - 425
Target Start/End: Complemental strand, 5636857 - 5636616
Alignment:
Q  190 aggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atc--ctgccttggaac 286  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||||  ||||| ||||||||| |||  |||||||| | |    
T  5636857 aggttgagttgcacatgacaacatacatcattacaaaacaataagaaaaaaataccctagagaga-acaagaggaggttggagatcatctgccttgaagc 5636759  T
Q  287 tctgatgctttacc----ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaaga 382  Q
    | |||||||| |||    ||||| ||| |||||||| |||||||| || | |||||  ||||||||||||||||| |  || ||||||||  | ||||||    
T  5636758 tttgatgcttgaccattgccttgtactactagctttctgaatgaataaaagtgtgtgcaagggtctctatttatagtgcatcattacttagtgattaaga 5636659  T
Q  383 gaagaaaactgagcttttaccaccgttttagcttgaaaaacaa 425  Q
    || ||| || |||||||| || | | |  ||||||||||||||    
T  5636658 gatgaagaccgagctttttcctctgatccagcttgaaaaacaa 5636616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 11082242 - 11082138
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaa 236  Q
    ||||||||||||||| |||||||   ||||||||||| |||||| ||||||| |||||||| | |||||||||||| ||||||| | |||||||||| ||    
T  11082242 attaatagaatccaacaaataag---gggttcatcgtggaaccctaatcaaagaggtttagctacacatgacaacacacatcatgaaaaaacaatagaaa 11082146  T
Q  237 aaatatac 244  Q
    ||| ||||    
T  11082145 aaacatac 11082138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 238
Target Start/End: Complemental strand, 23073126 - 23072921
Alignment:
Q  34 attttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataacttaataaaaa 132  Q
    |||||||||||||  ||||  |||||||||||||||  | |||||| | | |||||| |||||||| || ||||||| |||||  |||| |  |||||||    
T  23073126 attttcaagattaccgataaggattctcaattgaaaaagcattaagcacatgcaagagcgaattaaatcggacacaa-gaaaaacataattggataaaaa 23073028  T
Q  133 c-ttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaat 231  Q
      || |||||| |||||||| ||||||||   |||||||  |||||||| ||||||| ||||| |||| |||||| ||||||||||||| | ||||||||    
T  23073027 aatttattaatggaatccaacaaataagaaatggttcattttagaaccctaatcaaagaggttaagtttcacatgccaacaaacatcattataaaacaat 23072928  T
Q  232 aggaaaa 238  Q
    || ||||    
T  23072927 agaaaaa 23072921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 24596389 - 24596522
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||||||| ||||||||||| ||| |||||||| |||||||||||| |||| | ||| ||| |||||| ||||| ||| |||||  ||||||    
T  24596389 aactaaataaaaactttattaatagaattcaacaaataagaatgggttcatcgtggaactctaattaaagaggtttggttgctcataacaaccgacatca 24596488  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    | | |||||||||  ||||| |||| |||||||||    
T  24596489 ttataaaacaata-taaaaacatacactagagaga 24596522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 30406288 - 30406182
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||||||| |||||| |||||||| |||| |||  ||||||||||| |||||  ||||||| ||||||||||||  ||| |||| |||||||| |||    
T  30406288 aataaaaactttattaattgaatccaacaaatgagaaggggttcatcgtggaaccataatcaaagaggtttagttgcttatggcaaccaacatcattaca 30406189  T
Q  225 aaacaat 231  Q
    |||||||    
T  30406188 aaacaat 30406182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 26839604 - 26839707
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| ||||||| ||||||| ||||||||  ||||||||| | |||||  ||||||  |||||||||||| |||| ||||||| ||||||||||||    
T  26839604 aaaaactttattaataaaatccaacaaataagaaggggttcatcttggaaccttaatcaag-aggtttagttgctcatggcaacaaatatcataacaaaa 26839702  T
Q  228 caata 232  Q
    |||||    
T  26839703 caata 26839707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 2629937 - 2630029
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaa 230  Q
    ||||||| | ||||| ||||||||  ||||||||| | |||||| ||||||  |||||||||||| |||| |||||||||||||||||||||||    
T  2629937 attaataaattccaacaaataagaaggggttcatcatggaaccctaatcaag-aggtttagttgctcatggcaacaaacatcataacaaaacaa 2630029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 400
Target Start/End: Original strand, 26839793 - 26839848
Alignment:
Q  345 gtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    |||| ||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  26839793 gtctttatttatagcaaatgattacttagggtttaagagaagaaaactgagctttt 26839848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 7777558 - 7777619
Alignment:
Q  192 gtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    |||||||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  7777558 gtttagttgctcatggcaacaaacatcataataaaacaata-gaaaaacataccctagagaga 7777619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 9405254 - 9405366
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| ||||||| | |||||  |||||| ||||||||  ||||||||| | |||||| ||| ||  |||||||||||| |||| ||||| ||||||    
T  9405254 aactgaatgaaaactttaataataatatccaacaaataagaaggggttcatcatggaaccctaattaag-aggtttagttgctcatggcaacatacatca 9405352  T
Q  220 taacaaaacaatag 233  Q
    ||||||||||||||    
T  9405353 taacaaaacaatag 9405366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 400
Target Start/End: Original strand, 7777683 - 7777767
Alignment:
Q  316 tttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    ||||||||||   ||||||||||  |||||||| ||||||||  | ||| ||||||| ||||||||| |||||||||||||||||    
T  7777683 tttatgaatgtgtaataatgtgtgcaagggtctttatttatagcatatggttacttagggtttaagataagaaaactgagctttt 7777767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 315802 - 315728
Alignment:
Q  163 gggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    ||||||||||| |||||| ||||||  |||||||||||| |||| ||||| ||||||||||||| |||||| ||||    
T  315802 gggttcatcgtggaaccctaatcaag-aggtttagttgctcatggcaacatacatcataacaaagcaatagaaaaa 315728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 7816019 - 7815898
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||||||||||| | || || ||||||||  ||||| ||| | |||| | ||||||  |||||||||||| |||| ||||| |||||| || ||||    
T  7816019 aaaaacttcattaataaattcgaacaaataagaaggggtttatcttggaacgctaatcaag-aggtttagttgctcatggcaacatacatcacaagaaaa 7815921  T
Q  228 caataggaaaaatataccctagag 251  Q
    ||||| |||||| |||||||||||    
T  7815920 caata-gaaaaacataccctagag 7815898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 22334702 - 22334796
Alignment:
Q  144 gaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaa 239  Q
    |||||||| ||| ||||  ||||||||||| |||||  ||||||| |||||| |||| ||||||||||| ||||| | |||||| |||||||||||    
T  22334702 gaatccaacaaagaagaaggggttcatcgtggaaccataatcaaagaggttttgttgtacatgacaacatacatctttacaaaa-aataggaaaaa 22334796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 448
Target Start/End: Complemental strand, 9070942 - 9070814
Alignment:
Q  320 tgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaa 419  Q
    |||||||| ||||||  ||  |||||||||||||||||  ||| ||||||||| | ||||||||||||||  || ||||||  ||||  |  ||||||      
T  9070942 tgaatgaataataataagtgcaagggtctctatttatagaaaaggattacttaggttttaagagaagaaatttgtgctttttgcaccaatccagcttgcc 9070843  T
Q  420 aaacaagttgcaggcaatttatgcccaca 448  Q
    ||| ||| |||||||||||| ||||||||    
T  9070842 aaataagctgcaggcaatttctgcccaca 9070814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 20040216 - 20040327
Alignment:
Q  118 ataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacat 217  Q
    |||||| ||| ||||||| |||| | ||||| || ||||||||  |||||||| || |||||| ||||||  ||||||| |||| ||||  |||| ||||    
T  20040216 ataactgaatgaaaactttattagttgaatctaacaaataagaaggggttcatagttgaaccctaatcaag-aggtttatttgctcatggaaacatacat 20040314  T
Q  218 cataacaaaacaa 230  Q
    |||||||||||||    
T  20040315 cataacaaaacaa 20040327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 21544291 - 21544367
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgc 201  Q
    ||||||||||| | |||| |||||||| ||||||||  ||||||||| | |||||| ||||||| | ||||||||||    
T  21544291 aataaaaactttagtaatggaatccaacaaataagaaggggttcatcatggaaccctaatcaaagaagtttagttgc 21544367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 20446861 - 20446807
Alignment:
Q  192 gtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccct 247  Q
    |||||||||| |||| ||||| ||||||||||||||||||| |||||| |||||||    
T  20446861 gtttagttgctcatggcaacatacatcataacaaaacaata-gaaaaacataccct 20446807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 254
Target Start/End: Complemental strand, 7493990 - 7493866
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||||||||||| | | ||| ||||||||  |||||| ||||  |  || ||||||  |||||||||||  |||| ||||| ||||||||| | ||    
T  7493990 aaaaacttcattaataaatttcaacaaataagaaggggttcgtcgtgtattcctaatcaag-aggtttagttggtcatggcaacatacatcataaaataa 7493892  T
Q  228 caataggaaaaatataccctagagaga 254  Q
    ||||| |||||| ||||||||||||||    
T  7493891 caata-gaaaaacataccctagagaga 7493866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 11467482 - 11467605
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacatcataacaaa 226  Q
    |||||||| |||||| |||||||| ||||||||   ||| ||| || |||||  |||||| | || ||||||||||||| |||| | ||||||| |||||    
T  11467482 aaaaacttgattaattgaatccaacaaataagaagaggtccattgtggaaccttaatcaagagagatttagttgcacataacaaaatacatcattacaaa 11467581  T
Q  227 acaataggaaaaatataccctagaga 252  Q
    ||||||   |||| ||||||||||||    
T  11467582 acaata--taaaacataccctagaga 11467605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 18467213 - 18467104
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacatcataacaaaacaatagga 235  Q
    |||||| ||||||||  |||||||  ||||| ||||| |||||  |||||| | ||||||| |||| ||||  |||| ||||||| ||||||||||| ||    
T  18467213 attaattgaatccaactaataagaaggggtttatcgttgaaccataatcaagagaggtttaattgcgcatggtaacatacatcattacaaaacaata-ga 18467115  T
Q  236 aaaatataccc 246  Q
    |||||||||||    
T  18467114 aaaatataccc 18467104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 10670133 - 10670206
Alignment:
Q  320 tgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactg 393  Q
    |||||||||||||||| ||  |||||||||||||||||  ||||||||   || |||||| ||||||| |||||    
T  10670133 tgaatgaaaaataatgagtgcaagggtctctatttatagaaaatgattgggtagggtttaggagaagataactg 10670206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 21536942 - 21537055
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||| ||||| | |||| |||||||  ||||||||  | ||||||  | |||||| ||||||||| |||||||||| |||| ||||  | ||||    
T  21536942 aactgaataagaactttagtaatggaatccatcaaataagaaggagttcataatggaaccctaatcaaataagtttagttgctcatggcaactgatatca 21537041  T
Q  220 taacaaaacaatag 233  Q
    | ||||||||||||    
T  21537042 ttacaaaacaatag 21537055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 3400315 - 3400267
Alignment:
Q  345 gtctctatttatattaaatgattacttaaggtttaagagaagaaaactg 393  Q
    |||||||||||||  | |||| |||||| ||||||||||||||||||||    
T  3400315 gtctctatttatagcatatgactacttagggtttaagagaagaaaactg 3400267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 7326379 - 7326487
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacatc 218  Q
    |||| |||| |||||| ||||||  ||||||| |||||||     ||||||||| |||||| ||| || | |||||||||| |||||| |||||||||||    
T  7326379 aactaaatagaaactttattaattaaatccaacaaataagtacatgttcatcgtggaaccctaataaagagaggtttagttacacatggcaacaaacatc 7326478  T
Q  219 ataacaaaa 227  Q
    || ||||||    
T  7326479 attacaaaa 7326487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 9760815 - 9760743
Alignment:
Q  126 ataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagt 198  Q
    |||||||||| ||||| ||||||||| ||||||||  |||||||||||  | ||| | ||||| |||||||||    
T  9760815 ataaaaactttattaaaagaatccaacaaataagaaggggttcatcgtgaagccctactcaaagaggtttagt 9760743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 34 - 254
Target Start/End: Complemental strand, 9504721 - 9504501
Alignment:
Q  34 attttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataacttaataaaaa 132  Q
    ||||| |||||||  || || |||||||||||||||  | |||||| | | |||| ||| |||||| || ||||||| |||||  |||||| ||||||||    
T  9504721 attttaaagattaccgacacggattctcaattgaaaaagcattaagtacatgcaaaaacaaattaaatcggacacaa-gaaaaacataactgaataaaaa 9504623  T
Q  133 cttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaata 232  Q
    |||  ||||| |||||||| ||||||||  || |||||| |||||||  ||||||| ||||||||||| ||||| ||||||||||||||||||||||||     
T  9504622 ctttgttaatggaatccaacaaataagaagggattcatcttagaaccataatcaaagaggtttagttgtacatggcaacaaacatcataacaaaacaatg 9504523  T
Q  233 ggaaaaatataccctagagaga 254  Q
    | ||||| ||||||||||||||    
T  9504522 gaaaaaacataccctagagaga 9504501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 34 - 254
Target Start/End: Complemental strand, 9516087 - 9515867
Alignment:
Q  34 attttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataacttaataaaaa 132  Q
    ||||| |||||||  || || |||||||||||||||  | |||||| | | |||| ||| |||||| || ||||||| |||||  |||||| ||||||||    
T  9516087 attttaaagattaccgacacggattctcaattgaaaaagcattaagtacatgcaaaaacaaattaaatcggacacaa-gaaaaacataactgaataaaaa 9515989  T
Q  133 cttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaata 232  Q
    |||  ||||| |||||||| ||||||||  || |||||| |||||||  ||||||| ||||||||||| ||||| ||||||||||||||||||||||||     
T  9515988 ctttgttaatggaatccaacaaataagaagggattcatcttagaaccataatcaaagaggtttagttgtacatggcaacaaacatcataacaaaacaatg 9515889  T
Q  233 ggaaaaatataccctagagaga 254  Q
    | ||||| ||||||||||||||    
T  9515888 gaaaaaacataccctagagaga 9515867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 128 - 426
Target Start/End: Original strand, 21844226 - 21844527
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||| |||||||| |||||||| || ||||||| | |||||| ||||||| ||||||||||| ||||| ||||| ||||||| ||||||    
T  21844226 aaaaactttattaattgaatccaacaaataagaatgagttcatcttggaaccctaatcaaagaggtttagttgtacatggcaacatacatcattacaaaa 21844325  T
Q  228 caataggaaaaatataccctagagagagtcaagatgaggttg-gaatc--ctgccttggaactctgatgctttacc----ccttgaactgctagctttat 320  Q
    |||   |||||| | |||||| |||||  | ||| |||  ||  ||||  |||||||| | ||||||||||| |||    |||||||| ||||||||  |    
T  21844326 caa---gaaaaacaaaccctaaagaga-acgagaggagcatgtaaatcctctgccttgaagctctgatgcttgacccatgccttgaaccgctagcttact 21844421  T
Q  321 gaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaa 420  Q
    |||| || || | |||||  | |||| |||||||||||| ||| |||||||| |||||||||||||||||||| | |||| |||||| | || |||||||    
T  21844422 gaataaataaaagtgtgtgcaggggtttctatttatattgaattattacttagggtttaagagaagaaaactgtgttttttccaccgatctaacttgaaa 21844521  T
Q  421 aacaag 426  Q
    ||||||    
T  21844522 aacaag 21844527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 128 - 426
Target Start/End: Original strand, 21842597 - 21842900
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||| |||||||| |||||||| || ||||||| | |||||| ||||||| ||||||||||| ||||| ||||| ||||||| ||||||    
T  21842597 aaaaactttattaattgaatccaacaaataagaatgagttcatcttggaaccctaatcaaagaggtttagttgtacatggcaacatacatcattacaaaa 21842696  T
Q  228 caataggaaaaatataccctagagagagtcaagatgaggttg-gaatc--ctgccttggaactctgatgctttacc----ccttgaactgctagctttat 320  Q
    |||||  ||||  |||||||| |||||  | ||| |||  ||  ||||  |||||||| | ||||||||||| | |    ||||||||  |||||||| |    
T  21842697 caata-taaaagcataccctaaagaga-acgagaggagcatgtaaatcatctgccttgaagctctgatgcttgaaccatgccttgaacctctagctttct 21842794  T
Q  321 gaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaa 420  Q
    |||| || || | ||| |  |||||| ||| |||||||| ||| |||||||| |||||||||||||||||||| | |||| |||||| | || |||||||    
T  21842795 gaataaataaaagtgtatgcaagggtttctgtttatattgaattattacttagggtttaagagaagaaaactgtgttttttccaccgatctaacttgaaa 21842894  T
Q  421 aacaag 426  Q
    ||||||    
T  21842895 aacaag 21842900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 25474724 - 25474596
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||||||| ||||||| ||||||| | | ||| ||||||||  ||||||||||| |||||  ||||||  |||||||||||| |||| ||||| ||||||    
T  25474724 aacttaatgaaaactttattaataaatttcaacaaataagaaggggttcatcgtggaaccataatcaag-aggtttagttgctcatggcaacagacatca 25474626  T
Q  220 taacaaaacaataggaaaaatataccctaga 250  Q
    ||||||||||||| |||||| ||||||||||    
T  25474625 taacaaaacaata-gaaaaagataccctaga 25474596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 25460641 - 25460508
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||||||| |||||||||||| || ||||||||  |  ||||||||  ||| | |||||||||||||||||||| ||||| ||  || ||||    
T  25460641 aactaaataaaaactttattaatagaatctaacaaataagaacgtattcatcgtgaaactctaatcaaataggtttagttgcgcatgaaaatcaaaatca 25460542  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    | ||||||||||| |||||| |||| |||||||||    
T  25460541 ttacaaaacaata-gaaaaacatacactagagaga 25460508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 14921488 - 14921615
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||||||| ||||||||||||||| ||||||||   |||||||||  |||||| |||| || |||||| ||||| |||| ||||  ||||||| |||    
T  14921488 aataaaaactttattaatagaatccaacaaataaga-aaggttcatcgaggaaccctaatcgaagaggttttgttgctcatggcaaccgacatcattaca 14921586  T
Q  225 aaacaataggaaaaatataccctagagaga 254  Q
    |||||||  |||||| ||||||||||||||    
T  14921587 aaacaat-tgaaaaacataccctagagaga 14921615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 407
Target Start/End: Original strand, 21503878 - 21504264
Alignment:
Q  25 tacggatcgattttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataact 123  Q
    |||||||| ||||||||||||| | |||  |||||||| ||||||    |||||||  |  |||| || |||||| || ||||||| |||||  ||||||    
T  21503878 tacggatcaattttcaagattactaatatagattctcagttgaaacatcattaagatcagacaagtacaaattaaatcggacacaa-gaaaagcataact 21503976  T
Q  124 taataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataac 223  Q
     ||||||| ||| |||||| |||||||  ||||||||  ||||||||| | ||| ||  |||||| |||||||||||| || ||||||||||||||| |     
T  21503977 aaataaaa-ctttattaattgaatccatcaaataagaaagggttcatcttggaatcctgatcaaaaaggtttagttgctcacgacaacaaacatcattat 21504075  T
Q  224 aaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atc--ctgccttggaactctgatgctttacc----ccttgaactgctagct 316  Q
    |||| |||| |||||| ||||  ||||| ||  ||| | |||| || | |||  || |||||||||| |||||||| |||    ||||||||   |||||    
T  21504076 aaaataata-gaaaaacatactttagagtga-acaataggaggatgaagatcatctaccttggaactttgatgcttgaccttttccttgaaccattagct 21504173  T
Q  317 ttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccg 407  Q
    || | |||||| || | |||||  |||||| ||||||||||    ||||||||||  | ||||||||||||||||||||||||| ||||||    
T  21504174 ttctaaatgaataaaagtgtgtgtaagggtatctatttataacctatgattacttcggatttaagagaagaaaactgagctttttccaccg 21504264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 250
Target Start/End: Original strand, 18532942 - 18533061
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaac 228  Q
    ||||||| ||||||| | | ||| ||||||||  ||||| ||||| |||||| ||| ||| |||||||||||| |||| ||| | |||||||||||||||    
T  18532942 aaaactttattaataaatttcaacaaataagaaggggtttatcgtggaaccctaat-aaagaggtttagttgctcatggcaatagacatcataacaaaac 18533040  T
Q  229 aataggaaaaatataccctaga 250  Q
    || | |||||||||||||||||    
T  18533041 aa-aagaaaaatataccctaga 18533061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 20518659 - 20518766
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||||||| |||||| || |||||||| |||||  |||||||||||||||||| ||||||  |||||||||||| ||||   || |||||||| |||    
T  20518659 aataaaaactttattaattgattccaaaaa-taagaaggggttcatcgtagaaccctaatcaaggaggtttagttgctcatggacaccaacatcattaca 20518757  T
Q  225 aaacaatag 233  Q
    ||| |||||    
T  20518758 aaataatag 20518766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 35708468 - 35708374
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaata 232  Q
    ||||||| | ||||| |||||||| || ||||||||| |||||  ||||||  |||||||||||| |||| ||||| |||||||||||||||||||    
T  35708468 attaataaattccaacaaataagaatgagttcatcgtggaaccttaatcaag-aggtttagttgctcatggcaacatacatcataacaaaacaata 35708374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 17884028 - 17884087
Alignment:
Q  190 aggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctaga 250  Q
    ||||||||||||||||| |||| |||||||| ||||||||||| |||||| ||||||||||    
T  17884028 aggtttagttgcacatggcaaccaacatcattacaaaacaata-gaaaaacataccctaga 17884087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 30999420 - 30999357
Alignment:
Q  190 aggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    |||||||||| | |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  30999420 aggtttagtttctcatggcaacaaacatcataagaaaacaata-gaaaaacataccctagagaga 30999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 1733778 - 1733712
Alignment:
Q  163 gggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaa 230  Q
    |||||||||||  ||||| ||||||  |||||||||||| |||||||||| |||||||||||||||||    
T  1733778 gggttcatcgtgaaaccctaatcaag-aggtttagttgctcatgacaacatacatcataacaaaacaa 1733712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 27416622 - 27416767
Alignment:
Q  87 aagaacgaattaa-tcagacacaaagaaaatgataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatc 185  Q
    ||||||||||||| || ||||||| |||||| |||||| |||| |||||| || ||| |||||||| |||||| |  ||||||||  | |||||| ||||    
T  27416622 aagaacgaattaaatcggacacaa-gaaaatcataactcaatagaaactttataaattgaatccaacaaataataaggggttcatattggaaccctaatc 27416720  T
Q  186 aaataggtttagttgcacatgacaacaaacatcataacaaaacaatag 233  Q
    ||  |||||||||  |||| | |||||||||| ||| |||||||||||    
T  27416721 aag-aggtttagtgtcacacggcaacaaacattataccaaaacaatag 27416767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 18819353 - 18819272
Alignment:
Q  167 tcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctag 249  Q
    ||||||| |||||| ||||||| |||| ||||||| |||||||||   |||||| ||||||||||| |||||| |||||||||    
T  18819353 tcatcgtggaaccctaatcaaagaggtctagttgctcatgacaaccgtcatcattacaaaacaata-gaaaaacataccctag 18819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 24188712 - 24188596
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaa 236  Q
    ||||||||||||||| ||||||||  | ||||||| | |||||  ||||||| |||||||||||| |||| ||||  || ||||  ||||| |||| |||    
T  24188712 attaatagaatccaacaaataagaaggagttcatcatggaaccttaatcaaacaggtttagttgctcatggcaaccgacgtcatctcaaaataata-gaa 24188614  T
Q  237 aaatataccctagagaga 254  Q
    ||| | ||||||||||||    
T  24188613 aaacacaccctagagaga 24188596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 41256774 - 41256882
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaac 228  Q
    ||||||| ||||||| | ||||| ||||||||  ||||||||||| |||||| |||| || ||||||| |||| ||  |||||| | ||||||| |||||    
T  41256774 aaaactttattaataaattccaacaaataagaaagggttcatcgtggaaccctaatc-aagaggtttaattgctcacaacaacatatatcataagaaaac 41256872  T
Q  229 aataggaaaa 238  Q
    ||||| ||||    
T  41256873 aatagaaaaa 41256882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 21847865 - 21847986
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaat-aggtttagttgcacatgacaacaaacatcataacaaa 226  Q
    |||||||| ||||||  || ||||||||||| |   |||||||| | |||||| |||||||  ||||||||||||| | | |||| |||||||| |||||    
T  21847865 aaaaactttattaattaaacccaaaaaataataagtggttcatcttggaaccctaatcaaaagaggtttagttgcataaggcaaccaacatcatcacaaa 21847964  T
Q  227 acaataggaaaaatataccctaga 250  Q
    |||||||  |||| ||||||||||    
T  21847965 acaatag--aaaacataccctaga 21847986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 23909064 - 23909158
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||| ||||||| | ||||| ||||||||  || |||||||| ||||||  |||||  |||||||||||| |||| ||||| |||||||||||    
T  23909064 aaaactttattaataaattccaacaaataagaagggattcatcgtggaaccctgatcaag-aggtttagttgctcatggcaacatacatcataaca 23909158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 400
Target Start/End: Complemental strand, 15829610 - 15829536
Alignment:
Q  326 aaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    ||||||||||| |  ||| ||||||||||||||  ||| |||| ||| ||||||||||||||||| || ||||||    
T  15829610 aaaaataatgtctgcaagcgtctctatttatatccaataattagttatggtttaagagaagaaaattgggctttt 15829536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 27917437 - 27917555
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||||||||| | |||||| |||||||| ||||| ||  | | ||| ||| ||| || ||||||| | |||||||||| |||| ||||  ||||||    
T  27917437 aactaaataaaaacattattaatggaatccaacaaataggaaggtgatcaacgttgaaacctaatcaaagaagtttagttgctcatggcaaccgacatca 27917536  T
Q  220 taacaaaacaataggaaaa 238  Q
    | |||||||||||| ||||    
T  27917537 ttacaaaacaatagaaaaa 27917555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 16593180 - 16593288
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaac 228  Q
    ||||||| |||| || | ||||| ||||||||  |||| |||||| |||||  || |||  |||||||||||| |||  |||||||||||| ||||||||    
T  16593180 aaaactttattattaaattccaataaataagaaggggtacatcgtggaaccttaaccaag-aggtttagttgctcattgcaacaaacatcaaaacaaaac 16593278  T
Q  229 aataggaaaa 238  Q
    ||||| ||||    
T  16593279 aatagaaaaa 16593288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 19948946 - 19949017
Alignment:
Q  153 aaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaa 225  Q
    ||||||||  || |||||||| |||||| ||||||  |||||||||||| |||| |||||||||||| |||||    
T  19948946 aaataagaaaggattcatcgtggaaccctaatcaag-aggtttagttgctcatggcaacaaacatcacaacaa 19949017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 34 - 394
Target Start/End: Complemental strand, 32240069 - 32239708
Alignment:
Q  34 attttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataacttaataaaaa 132  Q
    ||||||||||||| |||||| ||||||||||| |||  | |||||| | |  |||||||||||||| ||  |||||| |||||  ||||   |||| |||    
T  32240069 attttcaagattactgatacggattctcaattaaaaaagcattaagcatagacaagaacgaattaactcgaacacaa-gaaaaacataatcgaatataaa 32239971  T
Q  133 cttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaata 232  Q
    ||| |||||| |||||||| ||||||||   |||||||| || ||||| ||||||  |||||||||||| ||  |||||| ||||||||||||| |||||    
T  32239970 ctttattaattgaatccaacaaataagaagaggttcatcttaaaaccctaatcaag-aggtttagttgctcacaacaacagacatcataacaaatcaata 32239872  T
Q  233 ggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttacc----ccttgaactgctagctttatgaatgaaa 328  Q
    | ||||| || | ||||| |||  ||||| |||| || |||| |||||| ||||||| ||| || |||    | |||||| ||||||||| ||||| ||     
T  32239871 g-aaaaacatgctctagaaagaa-caagaggaggatgaaatcttgcctttgaactctaatgtttgacctttgcattgaaccgctagctttctgaataaat 32239774  T
Q  329 aataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactga 394  Q
    ||||||||||  ||||||||| |||||||    ||||||||||| |||| ||||||||||||||||    
T  32239773 aataatgtgtgcaagggtctcaatttatagcctatgattacttatggttcaagagaagaaaactga 32239708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 400
Target Start/End: Original strand, 15213170 - 15213431
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaa 236  Q
    |||||| |||||||| | ||||||  || |||||| |||||||  ||||||  | |||||||||| ||||  ||||||||||||||||||| ||| | ||    
T  15213170 attaattgaatccaacagataagaagggattcatcttagaaccataatcaag-atgtttagttgctcatggaaacaaacatcataacaaaataattg-aa 15213267  T
Q  237 aaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccc----cttgaactgctagctttatgaatgaaaaata 332  Q
    ||| |||||||||| |||  || || |||| ||| ||   |||||| ||||||||||| | ||||    ||||||| ||||||||| |||||||||||||    
T  15213268 aaacataccctagaaagaa-catgaggaggatgggat---gccttgaaactctgatgcatgacccttgccttgaaccgctagctttctgaatgaaaaata 15213363  T
Q  333 atgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    |||| |   ||||||||||||||||  | ||||||||||| |||| ||||||||||||||||||||||    
T  15213364 atgtatcctagggtctctatttatagcatatgattacttatggttgaagagaagaaaactgagctttt 15213431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 167 - 426
Target Start/End: Original strand, 16051739 - 16052004
Alignment:
Q  167 tcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagagagtcaagatgagg 266  Q
    ||||| || ||||| ||| ||| |||||||||| |||||| |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||| ||||||    
T  16051739 tcatcttaaaaccctaattaaagaggtttagtttcacatggcaacaaacatcataacaaaacaatagaaaaaacatatcctagagaga-acaaaatgagg 16051837  T
Q  267 ttgga-atc--ctgccttggaactctgatgctttacc----ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatatt 359  Q
     | || |||  || |||| ||||||| ||| || |||    |||||||| | ||||||| | |||||| || |||||||  |||||| ||| ||||||      
T  16051838 atagagatcctctaccttagaactctaatggttgaccctttccttgaaccgttagctttcttaatgaataagaatgtgtgcaagggtgtctgtttataac 16051937  T
Q  360 aaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaacaag 426  Q
    | |||||||  || ||||||||||||||||||| || |||| |||||| |  |||||||||||||||    
T  16051938 atatgattaaatagggtttaagagaagaaaactaagttttttccaccgatccagcttgaaaaacaag 16052004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 426
Target Start/End: Complemental strand, 24121071 - 24120669
Alignment:
Q  25 tacggatcgattttcaagattattgatactgattctcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaaagaaaatgataact 123  Q
    |||||||| ||||| || ||||| ||||| |||||||||||||||    |||||||| | ||||| || |||||| || ||||||| |||| ||||||||    
T  24121071 tacggatcaatttttaa-attatcgatacagattctcaattgaaaaaacattaagaacatgcaagtacaaattaaatctgacacaa-gaaattgataact 24120974  T
Q  124 taataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataac 223  Q
     ||| |||| || |||||| |||||||| ||||||||  | ||||||| | ||||||  |||||| |||||||||||  |||| ||||| ||||||| |     
T  24120973 gaatgaaaattttattaatggaatccaacaaataagaaggagttcatcttggaaccctgatcaaagaggtttagttg--catggcaacatacatcattaa 24120876  T
Q  224 aaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atc--ctgccttggaactctgatgctttaccc----cttgaactgctagct 316  Q
     |||||||   ||||| ||||| ||||||||  ||||| |||| | || |||  ||||||||||||||||||||||  |||    ||| ||| | |||||    
T  24120875 caaacaat--taaaaaaataccgtagagaga-acaagaggaggatagagatcctctgccttggaactctgatgcttggcccttggcttaaaccggtagct 24120779  T
Q  317 ttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagctt 416  Q
    || ||||| |  || | |||||  || ||||||||||||||  | |||||||||||  |||||||||||||||| || |||||  ||||||   ||||||    
T  24120778 ttctgaatcattaaaagtgtgtgcaatggtctctatttatagcatatgattacttagtgtttaagagaagaaaattgggctttatccaccgacctagctt 24120679  T
Q  417 gaaaaacaag 426  Q
     |||||||||    
T  24120678 taaaaacaag 24120669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 23893595 - 23893494
Alignment:
Q  345 gtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttg-aaaaacaagttgcaggcaatttatgc 443  Q
    |||||||||||||| |||| ||||||||  |||||||||||||||||| || |||| ||||| |||| ||||| ||||||||||||||| |||||| |||    
T  23893595 gtctctatttatataaaataattacttagagtttaagagaagaaaactcagttttttccacccttttggcttgaaaaaacaagttgcagacaatttttgc 23893496  T
Q  444 cc 445  Q
    ||    
T  23893495 cc 23893494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 6887645 - 6887728
Alignment:
Q  167 tcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctaga 250  Q
    ||||||| |||||| ||||||| ||||||||||||||||| ||||  ||||||| |||||||||||||||||| ||||| ||||    
T  6887645 tcatcgtggaaccctaatcaaagaggtttagttgcacatggcaaccgacatcattacaaaacaataggaaaaacataccttaga 6887728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 29046699 - 29046824
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| ||||||| ||||||| | ||||| ||||||||  ||||||||||| |||||| ||||||| || ||||||| | |||| ||||||||||||    
T  29046699 aactgaatgaaaactttattaataaattccaacaaataagaaggggttcatcgtggaaccctaatcaaa-agatttagtttctcatggcaacaaacatca 29046797  T
Q  220 taacaaaacaataggaaaaatataccct 247  Q
    |||||||| |||| | ||||||||||||    
T  29046798 taacaaaataata-gtaaaatataccct 29046824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 30850471 - 30850580
Alignment:
Q  144 gaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatata 243  Q
    ||||| |||||||||||  | ||||||| |  ||||  ||||||| |||||||||||||||||||||| |||| ||| ||||||||||| |||||| |||    
T  30850471 gaatcaaaaaaataagaaggagttcatcttgaaaccttaatcaaagaggtttagttgcacatgacaactaacaacattacaaaacaata-gaaaaacata 30850569  T
Q  244 ccctagagaga 254  Q
    |||||||||||    
T  30850570 ccctagagaga 30850580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 5154476 - 5154365
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaa 236  Q
    |||||| |||||||| |||||| |  ||||||||||| |||||  |||||||||||||||||||| |||||||||  |||||||  ||||||||   |||    
T  5154476 attaattgaatccaacaaataataaggggttcatcgtggaaccttaatcaaataggtttagttgctcatgacaaccgacatcattgcaaaacaa---gaa 5154380  T
Q  237 aaatataccctagag 251  Q
    ||||||||| |||||    
T  5154379 aaatataccgtagag 5154365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 13305091 - 13304987
Alignment:
Q  148 ccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccct 247  Q
    |||| ||||||||  ||||||||||||||| || ||||||  ||||||||||||  ||| ||||  ||||||||| |||||||||| |||||||||||||    
T  13305091 ccaacaaataagaaggggttcatcgtagaaacctaatcaag-aggtttagttgcttatggcaaccgacatcataagaaaacaatag-aaaaatataccct 13304994  T
Q  248 agagaga 254  Q
    |||||||    
T  13304993 agagaga 13304987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 12957224 - 12957096
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    |||| |||||| ||||||  ||||||| ||||||||  |  |||||  ||||| || ||||||| |||||||||||||||||  || |||||||||||||    
T  12957224 aatacaaactttattaatgaaatccaacaaataagaaggcattcattttagaatcctaatcaaagaggtttagttgcacatggtaataaacatcataaca 12957125  T
Q  225 aaacaataggaaaaatataccctagagaga 254  Q
    ||||| || |||||| |||||||| |||||    
T  12957124 aaacatta-gaaaaacataccctatagaga 12957096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 248
Target Start/End: Original strand, 13583010 - 13583133
Alignment:
Q  124 taataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataac 223  Q
    ||||||||||||  ||||  |||||||| | ||||||  || ||||| || |||||| ||| ||| || ||||||| | |||||||||||||||||| ||    
T  13583010 taataaaaactttgttaactgaatccaacatataagaagggtttcattgtggaaccctaatgaaagagatttagttactcatgacaacaaacatcattac 13583109  T
Q  224 aaaacaataggaaaaatatacccta 248  Q
    |||||||| ||||||| ||||||||    
T  13583110 aaaacaat-ggaaaaacatacccta 13583133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 11308234 - 11308343
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||||  |||||| ||||||||  ||||||||| | |||||    ||||| ||||||| |||| |||||||||||||||||||||||||    
T  11308234 aaaaactttattaataatatccaacaaataagaaggggttcatcttggaacctttttcaaa-aggtttatttgctcatgacaacaaacatcataacaaaa 11308332  T
Q  228 caataggaaaa 238  Q
     ||||| ||||    
T  11308333 taatagaaaaa 11308343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 18771648 - 18771520
Alignment:
Q  125 aataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataaca 224  Q
    ||||||| ||| ||||| ||||||||| ||||||||  || |||||||| ||| || ||||||| ||| ||||||   |||| ||||  ||||||| |||    
T  18771648 aataaaagctttattaaaagaatccaacaaataagaagggcttcatcgtggaatcctaatcaaagaggattagtttatcatggcaaccgacatcattaca 18771549  T
Q  225 aaacaataggaaaaatataccctagagaga 254  Q
    |||||||| |||||| |||| |||||||||    
T  18771548 aaacaata-gaaaaagatactctagagaga 18771520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 5569790 - 5569841
Alignment:
Q  341 aagggtctctatttatattaaatgattacttaaggtttaagagaagaaaact 392  Q
    |||||||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  5569790 aagggtctctatttataacaaatgattacttagggtttaagagaaaaaaact 5569841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 11438119 - 11437987
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| |||||| |||| ||||||||||||||| ||||||||  |||||||||||  || || ||||||| | | |||||||||||||  || | ||||||    
T  11438119 aactgaataaatactttattaatagaatccaacaaataagaaggggttcatcgt-taaacctaatcaaagatgcttagttgcacatggaaatatacatca 11438021  T
Q  220 taacaaaacaataggaaaaatataccctagagaga 254  Q
    | |||| ||||||  ||||| |||||||| |||||    
T  11438020 ttacaagacaata-aaaaaacataccctacagaga 11437987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 254
Target Start/End: Original strand, 28900727 - 28900850
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||||  || ||| ||||||||  ||||||||||| ||||| || ||||  |||||||||||| ||   ||||| ||||||||||||||    
T  28900727 aaaaactttattaataatattcaacaaataagaaggggttcatcgtggaaccgaa-tcaag-aggtttagttgctcagtgcaacagacatcataacaaaa 28900824  T
Q  228 caataggaaaaatataccctagagaga 254  Q
    ||||| |||||| ||| ||||||||||    
T  28900825 caata-gaaaaacatatcctagagaga 28900850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 24094864 - 24094764
Alignment:
Q  132 acttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaat 231  Q
    |||| |||||| |||||||| ||||||||  || || ||| |||||||  ||||||  |||||||||||| ||||  ||||||||| |||||||||||||    
T  24094864 actttattaattgaatccaacaaataagaagggattaatcttagaaccgtaatcaag-aggtttagttgctcatggaaacaaacatgataacaaaacaat 24094766  T
Q  232 ag 233  Q
    ||    
T  24094765 ag 24094764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 254
Target Start/End: Original strand, 24927258 - 24927382
Alignment:
Q  130 aaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatc-aaataggtttagttgcacatgacaacaaacatcataacaaaac 228  Q
    |||||| |||||| ||||||||||||||||| |  ||||||| ||||||||||||| | | ||||| |||||| |||  |||    |||||| |||||||    
T  24927258 aaactttattaattgaatccaaaaaataagaataagttcatcttagaacccaaatcgagagaggttcagttgctcatagcaaatggcatcattacaaaac 24927357  T
Q  229 aataggaaaaatataccctagagaga 254  Q
    |||| |||||| |||||||| |||||    
T  24927358 aata-gaaaaacataccctaaagaga 24927382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 24927475 - 24927519
Alignment:
Q  341 aagggtctctatttatattaaatgattacttaaggtttaagagaa 385  Q
    |||||||||||||||||||| ||||||||||| || |||||||||    
T  24927475 aagggtctctatttatattagatgattacttaggggttaagagaa 24927519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 27084973 - 27085077
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||| || ||||| |||||| |  |||||||||||  | ||| ||||||| |||||||||||| |||||||||  ||||| | | ||||    
T  27084973 aaaaactttattaattgagtccaacaaataaaaaagggttcatcgtgaagccctaatcaaagaggtttagttgctcatgacaaccgacatcgttaaaaaa 27085072  T
Q  228 caata 232  Q
    |||||    
T  27085073 caata 27085077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 249
Target Start/End: Complemental strand, 28075204 - 28075082
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacatcataacaaa 226  Q
    |||||||| |||||| |||||||| ||||||||  | ||||||||| |||||| |||||  | || ||||||| |||||| |||   | ||||| |||||    
T  28075204 aaaaactttattaattgaatccaataaataagaaggagttcatcgtggaaccctaatcatgagagatttagttccacatggcaagtgatatcattacaaa 28075105  T
Q  227 acaataggaaaaatataccctag 249  Q
    ||||||  ||||| |||||||||    
T  28075104 acaatataaaaaacataccctag 28075082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 30544407 - 30544341
Alignment:
Q  166 ttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaata 232  Q
    |||||| | |||||| ||||||||||||| |||||| |||| |||| | |||||| |||||||||||    
T  30544407 ttcatcatggaaccctaatcaaataggttcagttgctcatggcaaccaccatcattacaaaacaata 30544341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 27118198 - 27118246
Alignment:
Q  163 gggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaac 211  Q
    |||||||||||||||||| | ||||| || ||||||||| |||||||||    
T  27118198 gggttcatcgtagaaccctactcaaagagatttagttgctcatgacaac 27118246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 28290779 - 28290851
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaaca 212  Q
    |||||| |||||||| ||||||| | |||||||||||| ||||| ||| |||  ||||||||||||||| ||||||    
T  28290779 attaattgaatccaacaaataag-tagggttcatcgtataaccctaataaaa--ggtttagttgcacatcacaaca 28290851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 296
Target Start/End: Complemental strand, 26188474 - 26188296
Alignment:
Q  118 ataacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacat 217  Q
    |||||| ||||||||||| |||||| | |||||| ||||||||  | ||||||| |||||||| ||||||| ||||||||||| ||||||||||| ||||    
T  26188474 ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacatgacaacatacat 26188375  T
Q  218 cataacaaaacaataggaaaaatataccctagagagagtcaagatgaggttgga-atc--ctgccttggaactctgatgctt 296  Q
    | ||||||||||||||  |||| |||||||| |||||  ||||| |||| || | |||  ||||||||||||||||||||||    
T  26188374 cgtaacaaaacaatag--aaaacataccctatagaga-acaagaggaggatgaagatcctctgccttggaactctgatgctt 26188296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 129 - 425
Target Start/End: Original strand, 12110732 - 12111029
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaa-a 227  Q
    ||||||| | ||||||||||||| ||||||| | ||||||||| | ||||||  || ||| |||||||||| | | || ||||||||||||||||| | |    
T  12110732 aaaactttaataatagaatccaacaaataagttggggttcatcttggaaccctgat-aaagaggtttagttactcgtggcaacaaacatcataacacata 12110830  T
Q  228 caataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttaccc----cttgaactgctagctttatgaa 323  Q
     ||||| |||||||  ||||| |||||  ||||| ||||  | |||| |||| |  ||||||||||||| || |    ||||||| |  | |||| ||||    
T  12110831 aaatagaaaaaata--ccctatagagaa-caagaagaggaagcaatcttgccatccaactctgatgcttaacactttccttgaaccgtcaactttttgaa 12110927  T
Q  324 tgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaac 423  Q
    |||||||||||| ||  ||| || |||||||||||||||||||| |||| ||||||||||||||||| ||||  |||  ||||| | |||||||| ||||    
T  12110928 tgaaaaataatgagtgcaagcgtatctatttatattaaatgatttcttagggtttaagagaagaaaattgagaattttgcaccgatctagcttgagaaac 12111027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 29438143 - 29438012
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| |||||||| || ||||| ||||||||| ||||||||  |||||||| || |||||| ||||||| |||||||||||| ||||  |||  ||||||    
T  29438143 aactgaataaaaaatttattaaaagaatccaacaaataagaaagggttcattgtggaaccctaatcaaagaggtttagttgctcatggaaaccgacatca 29438044  T
Q  220 taacaaaacaataggaaaaatataccctagaga 252  Q
    | ||||||||||| |||||| ||||||||||||    
T  29438043 ttacaaaacaata-gaaaaacataccctagaga 29438012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 9782494 - 9782622
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| ||||||| ||||||| | ||||| ||||||||  ||||||||||| |||||| |||| || |||||||||||| ||||  |||| ||||||    
T  9782494 aactgaatgaaaactttattaataaattccaacaaataagaaggggttcatcgtggaaccctaatc-aagaggtttagttgctcatgcaaacatacatca 9782592  T
Q  220 taacaaaacaataggaaaaatataccctaga 250  Q
    ||||||||||||| || ||||||||||||||    
T  9782593 taacaaaacaata-gacaaatataccctaga 9782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 10577172 - 10577047
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatgacaacaaacatcataacaaa 226  Q
    ||||||||||| ||| |||||||| ||||||||   |||||||| | |||||| | |||| | ||||||||||| ||||| ||||||||||||| |||||    
T  10577172 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 10577073  T
Q  227 acaataggaaaaatataccctagagag 253  Q
    ||||||  ||||| |||||||||||||    
T  10577072 acaata-taaaaacataccctagagag 10577047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 31859313 - 31859402
Alignment:
Q  144 gaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaatag 233  Q
    ||||||||||||||| |  ||||| ||||| |||||  ||||||| |||||||||||||||||||||| || ||||| ||||||||||||    
T  31859313 gaatccaaaaaataataaggggtttatcgtggaaccttaatcaaagaggtttagttgcacatgacaaccaatatcattacaaaacaatag 31859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 320 - 400
Target Start/End: Complemental strand, 15192747 - 15192667
Alignment:
Q  320 tgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagctttt 400  Q
    |||||||| ||||||| ||| |||  ||||||||||||  |||||||||||||  ||||||||||||||||||||||||||    
T  15192747 tgaatgaataataatgggtacaagaatctctatttatagaaaatgattacttagagtttaagagaagaaaactgagctttt 15192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 9288637 - 9288538
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||| |||||||| |||||| |  |||||||| ||||||||  ||||||| ||||||||||||| |||  |||||||||||| ||||||    
T  9288637 aaaaactttattaattgaatccaacaaataataaggggttcattgtagaaccataatcaaagaggtttagttgcatatgtgaacaaacatcattacaaaa 9288538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 12806423 - 12806484
Alignment:
Q  192 gtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  12806423 gtttagttgctcatgacaataaacatcataacaaaacaata-gaaaaatatatcctagagaga 12806484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 47024215 - 47024278
Alignment:
Q  190 aggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    |||||| || || |||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  47024215 aggtttcgtagctcatgacaacaaacatcataacaaaacaata-gaaaaatataccttagagaga 47024278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 252
Target Start/End: Complemental strand, 19602480 - 19602366
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaa 236  Q
    |||||||| |||||| |||| |||  ||||||||| | |||||| ||||||| | |||||||||| |||| ||||  ||||||| ||||||||||| |||    
T  19602480 attaatagtatccaacaaatgagaaggggttcatcatggaaccctaatcaaagaagtttagttgctcatggcaaccgacatcattacaaaacaata-gaa 19602382  T
Q  237 aaatataccctagaga 252  Q
    ||| ||||||| ||||    
T  19602381 aaacataccctcgaga 19602366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 1695310 - 1695430
Alignment:
Q  132 acttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaat 231  Q
    |||| |||||||  || ||| ||||||||  ||||||||| | |||||| ||||||  |||||||||||  |||||||||||||||| | ||||||||||    
T  1695310 actttattaataatattcaacaaataagaaggggttcatcatggaaccctaatcaag-aggtttagttggtcatgacaacaaacatcgtgacaaaacaat 1695408  T
Q  232 aggaaaaatataccctagagaga 254  Q
    | |||||| ||||||| ||||||    
T  1695409 a-gaaaaacataccctcgagaga 1695430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 5676888 - 5676794
Alignment:
Q  144 gaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaa 238  Q
    ||||||||||||||| |   ||||| || |||||||| ||||||| ||||| ||||||||||  ||||| ||||||| |||||||||||| ||||    
T  5676888 gaatccaaaaaataataagaggttcttcttagaaccctaatcaaagaggttcagttgcacatagcaacatacatcattacaaaacaatagaaaaa 5676794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 39134190 - 39134300
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||| |||||| | ||||||||   ||||||||||  |||   ||||||| ||||||| |||||||||||| |||||||||| | ||||    
T  39134190 aaaaactttattaattgaatcctacaaataagaaatggttcatcgtgaaactttaatcaaagaggtttatttgcacatgacatcaaacatcattataaaa 39134289  T
Q  228 caataggaaaa 238  Q
    |||||| ||||    
T  39134290 caatagaaaaa 39134300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 390
Target Start/End: Original strand, 17024322 - 17024593
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| ||||||| |||||||  ||| |||||||||||  ||||||||| | |||||| ||| ||| |||||||||||| ||||  |||||||||||    
T  17024322 aactgaatgaaaactttattaataatatcaaaaaaataagaaagggttcatcatggaaccctaat-aaagaggtttagttgctcatggaaacaaacatca 17024420  T
Q  220 taacaaaacaataggaaaaatataccctagagagagtcaagatgaggttggaatcctgccttggaactctgatgctttacc----ccttgaactgctagc 315  Q
    ||| ||| | ||| |||||| ||  ||||||||||  |||||  | |  | |||| ||||||||| ||| ||||||| |||    |||||||| |  |      
T  17024421 taataaagctata-gaaaaacatttcctagagaga-acaagagaaagaagaaatcttgccttggagctccgatgcttgacccttgccttgaaccgtcaat 17024518  T
Q  316 tttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaa 390  Q
     || |||||||| ||||||| ||  ||||||||||||||||| | ||||||||  || |||||||||||| ||||    
T  17024519 gttctgaatgaataataatgagtgtaagggtctctatttatagtgaatgattaggtagggtttaagagaataaaa 17024593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 21047873 - 21047796
Alignment:
Q  155 ataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaata 232  Q
    |||||| || ||||||| |  ||||| ||||||| ||||||||||||||||| |||| |||||||| |||||||||||    
T  21047873 ataagaatgagttcatcttgaaaccctaatcaaagaggtttagttgcacatggcaaccaacatcattacaaaacaata 21047796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 439
Target Start/End: Original strand, 34863884 - 34863976
Alignment:
Q  347 ctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaacaagttgcaggcaattt 439  Q
    |||||||||||  ||||||||||| | |||||||||| ||||||||||| ||||  || || |  ||||||||||||||| |||| |||||||    
T  34863884 ctctatttatagcaaatgattactcagggtttaagagtagaaaactgagttttttgcatcgatccagcttgaaaaacaagctgcatgcaattt 34863976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 5676709 - 5676646
Alignment:
Q  362 atgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaacaa 425  Q
    ||||||||||| ||||||||||||||||||||  ||||| |||||| || | ||||||||||||    
T  5676709 atgattacttagggtttaagagaagaaaactggactttttccaccgcttcaacttgaaaaacaa 5676646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 20985007 - 20985121
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatca 219  Q
    |||| ||| ||||||| ||||| |||| |||| ||||||||  || |||||| | |||||| ||||||||||||| |||| | ||| |||||   |||||    
T  20985007 aactgaatgaaaactttattaaaagaacccaacaaataagaagggattcatcatggaaccctaatcaaataggttcagttactcataacaaccggcatca 20985106  T
Q  220 taacaaaacaatagg 234  Q
    | |||||||||||||    
T  20985107 ttacaaaacaatagg 20985121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 254
Target Start/End: Complemental strand, 33519744 - 33519619
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||| ||||  || ||||||||  ||||||| |||  ||||| ||||||| |||||||||| || ||| ||||  ||||||| | || |    
T  33519744 aaaaactttattaattgaatttaacaaataagaaggggttcaacgtgaaaccctaatcaaagaggtttagttacatatggcaaccgacatcattataaga 33519645  T
Q  228 caataggaaaaatataccctagagaga 254  Q
    |||||| |||||||||||| |||||||    
T  33519644 caatag-aaaaatatacccaagagaga 33519619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 238
Target Start/End: Complemental strand, 4733407 - 4733306
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaa 236  Q
    |||||| |||||||| ||||||||     |||||||| | |||| ||||||| ||||||||||||||||| |||||||  | || |||||||||||| ||    
T  4733407 attaattgaatccaacaaataagaagtaattcatcgtgggaccctaatcaaagaggtttagttgcacatggcaacaaagcttattacaaaacaatagaaa 4733308  T
Q  237 aa 238  Q
    ||    
T  4733307 aa 4733306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 7023630 - 7023707
Alignment:
Q  130 aaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaa-ataggtttagttgcacatg 206  Q
    |||||| |||||| |||||||| |||||||| |||||||||| | |||||  |||||| | |||||||||||||||||    
T  7023630 aaactttattaattgaatccaacaaataagaatgggttcatcatggaaccataatcaagagaggtttagttgcacatg 7023707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 390
Target Start/End: Complemental strand, 21077796 - 21077716
Alignment:
Q  310 gctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaa 390  Q
    ||||||||| |||||||| || |  ||| | ||||||||||||||||| || || |||||||| || ||||||||||||||    
T  21077796 gctagctttttgaatgaataagatagtggacaagggtctctatttatagtagatcattacttaggggttaagagaagaaaa 21077716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 384
Target Start/End: Complemental strand, 19602310 - 19602227
Alignment:
Q  301 ccttgaactgctagctttatgaatgaaaaataatgtgtaaaagggtctctatttatattaaatgattacttaaggtttaagaga 384  Q
    ||||| || ||||||||| ||||||||||| |  ||||| ||||||||||||||||| |  ||||||||||  || ||||||||    
T  19602310 ccttgtaccgctagctttctgaatgaaaaaaagagtgtacaagggtctctatttataatgcatgattacttcggggttaagaga 19602227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 24577045 - 24576924
Alignment:
Q  129 aaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaac 228  Q
    |||||| |||||||||||||||| |||||||   ||||| ||||| |||||| | | ||| ||||||| |||| |||||||||  |  |||| ||||||     
T  24577045 aaaactacattaatagaatccaacaaataag---gggtttatcgtggaaccctagttaaagaggtttaattgctcatgacaaccgatgtcattacaaaat 24576949  T
Q  229 aataggaaaaatataccctagagaga 254  Q
    |||| || ||| ||||||||||||||    
T  24576948 aata-gagaaacataccctagagaga 24576924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 51885347 - 51885214
Alignment:
Q  120 aacttaat-aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatc 218  Q
    |||||||| |||||||| |||| || | ||||| ||||||||  ||||||||||| ||| || |||| || |||||||||||  |||||||||   ||||    
T  51885347 aacttaatgaaaaactttattattaaattccaataaataagaaggggttcatcgtggaaacctaatc-aagaggtttagttgttcatgacaactggcatc 51885249  T
Q  219 ataacaaaacaataggaaaaatataccctagagaga 254  Q
    |||| ||||||| | |||||| |||||||| |||||    
T  51885248 ataagaaaacaa-aagaaaaacataccctacagaga 51885214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 15192891 - 15192815
Alignment:
Q  176 aacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    ||||| ||||||| |||||||||| | | |||||||| ||||||||||||||||||| |||||| | ||||| ||||||    
T  15192891 aaccctaatcaaa-aggtttagtttctcttgacaacatacatcataacaaaacaata-gaaaaacacaccctggagaga 15192815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 18444907 - 18444816
Alignment:
Q  137 attaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaa 230  Q
    |||||| |||||||||||||||||  || |||||||| |||||| ||||||| | ||||| |||| |||| | || |||||||| |||||||||    
T  18444907 attaattgaatccaaaaaataaga-aggtttcatcgtggaaccctaatcaaagatgtttatttgctcatggc-accaacatcattacaaaacaa 18444816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 394
Target Start/End: Original strand, 25314884 - 25314912
Alignment:
Q  366 ttacttaaggtttaagagaagaaaactga 394  Q
    |||||||||||||||||||||||||||||    
T  25314884 ttacttaaggtttaagagaagaaaactga 25314912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 445
Target Start/End: Original strand, 47024368 - 47024472
Alignment:
Q  341 aagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccaccgttttagcttgaaaaacaagttgcaggcaattta 440  Q
    |||||||||||||||||  |||| |||| ||| ||| || ||||||||| ||   |||||  ||||| |  || ||| |||||||| |||||||||||||    
T  47024368 aagggtctctatttatagaaaataattaattagggtgtaggagaagaaatctagacttttcgcaccgatccagtttggaaaacaagctgcaggcaattta 47024467  T
Q  441 tgccc 445  Q
    |||||    
T  47024468 tgccc 47024472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 406
Target Start/End: Original strand, 11178 - 11445
Alignment:
Q  144 gaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatata 243  Q
    ||||||||||||||||| | ||||| || |||||||| ||||||| |||||||| ||||||||  |||| ||||| | ||||||||||| |||||| |||    
T  11178 gaatccaaaaaataagaataggttcttcttagaaccctaatcaaagaggtttaggtgcacatggaaacatacatcgttacaaaacaata-gaaaaacata 11276  T
Q  244 ccctagagagagtcaagatgaggttgga-atc--ctgccttggaactctgatgctttacc----ccttgaactgctagctttatgaatgaaaaataatgt 336  Q
    | |||||||||  ||||| |||| |||| |||  || |||||||||| |||||||| |||    ||||| |  | ||||||| |||||||| || ||| |    
T  11277 cactagagaga-acaagaggaggatggatatcctctaccttggaactttgatgcttgacccttgccttgtaacgttagctttctgaatgaataaaaatat 11375  T
Q  337 gtaaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaactgagcttttaccacc 406  Q
    ||  |||||||||||||||||  | || |||||||| | |||||||||| |||||||  ||||| |||||    
T  11376 gtgcaagggtctctatttatagcatattattacttaggatttaagagaaaaaaactggacttttcccacc 11445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 146 - 390
Target Start/End: Original strand, 8150 - 8399
Alignment:
Q  146 atccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatatacc 245  Q
    |||||||||||||||   ||||| || | |||||| |||||||||||||||||||||||||  |||| ||||  | ||||||||||| |||||| ||||     
T  8150 atccaaaaaataagaagaggttcttcttcgaaccctaatcaaataggtttagttgcacatggaaacatacattgttacaaaacaata-gaaaaacataca 8248  T
Q  246 ctagagagagtcaagatgaggttgga-atc--ctgccttggaactctgatgctttacc----ccttgaactgctagctttatgaatgaaaaataatgtgt 338  Q
    |||||||||  ||||| |||| |||| |||  || ||||||||||||||||||| |||    | ||| |    ||||||| |||||||| || ||||| |    
T  8249 ctagagaga-acaagaggaggatggatatcctctaccttggaactctgatgcttgacccttgcgttgtaacattagctttctgaatgaataaaaatgtct 8347  T
Q  339 aaaagggtctctatttatattaaatgattacttaaggtttaagagaagaaaa 390  Q
      |||||||||||||||||  | || |||||||| |||| ||||||||||||    
T  8348 gcaagggtctctatttatagcatattattacttagggttaaagagaagaaaa 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 33144 - 33271
Alignment:
Q  126 ataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaa 225  Q
    |||||||||| ||||| ||||||||| ||||||||  || |||||| | |||||| ||||||| ||| ||||||   |||| ||||  ||||||| ||||    
T  33144 ataaaaactttattaaaagaatccaacaaataagaagggcttcatcatggaaccctaatcaaagaggattagtttatcatggcaaccgacatcattacaa 33243  T
Q  226 aacaataggaaaaatataccctagagaga 254  Q
    ||||||| |||||| |||| |||||||||    
T  33244 aacaata-gaaaaagatactctagagaga 33271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 5201 - 5262
Alignment:
Q  192 gtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagagaga 254  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||| ||| ||||||||||    
T  5201 gtttagttgctcatgacaacatacatcataacaaaacaata-gaaaaacatatcctagagaga 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 11059 - 11193
Alignment:
Q  120 aacttaataaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaata--ggtttagttgcacatgacaacaaacat 217  Q
    |||| ||||||||||| ||||||  |||| || |||| |||  ||||||||||| |||||| ||| ||| |  |||||||||||||||| ||||| | ||    
T  11059 aactgaataaaaacttgattaattaaatctaacaaatgagaa-gggttcatcgtggaaccctaataaaaaaaaggtttagttgcacatggcaacataaat 11157  T
Q  218 cataacaaaacaataggaaaaatataccctagagaga 254  Q
     || ||||||||||| |||||||||||| ||||||||    
T  11158 tatcacaaaacaata-gaaaaatataccttagagaga 11193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 254
Target Start/End: Original strand, 22021 - 22145
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    |||||||| |||||||  |||||| ||||||||| ||||||||| | |||||   |||||  |||||||||||  |||| ||||| | ||||||||||||    
T  22021 aaaaactttattaataatatccaacaaataagatggggttcatcatggaaccatgatcaag-aggtttagttgttcatggcaacataaatcataacaaaa 22119  T
Q  228 caataggaaaaatataccctagagaga 254  Q
    |||||  ||| ||||||||| ||||||    
T  22120 caata-aaaatatataccctggagaga 22145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 8344 - 8245
Alignment:
Q  153 aaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaacaataggaaaaatataccctagaga 252  Q
    ||||||||  ||||||||| | |||||| ||| ||  |||||||||||| |||  |||||||||||||||  |||||||| |||||| ||||||||||||    
T  8344 aaataagaaggggttcatcttggaaccctaattaag-aggtttagttgctcatagcaacaaacatcataatgaaacaata-gaaaaaaataccctagaga 8247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 2424 - 2546
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    ||||| || ||||||| | ||||| ||||||||  |||||||| || |||||| ||||||  |||||||||||| |||| ||||| | ||||||| ||||    
T  2424 aaaaattttattaataaattccaacaaataagaaggggttcattgtggaaccctaatcaag-aggtttagttgctcatggcaacatatatcataagaaaa 2522  T
Q  228 caataggaaaaatataccctagaga 252  Q
     |||| |||||  ||||||||||||    
T  2523 taata-gaaaatcataccctagaga 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 2589 - 2711
Alignment:
Q  128 aaaaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaa 227  Q
    ||||| || ||||||| | ||||| ||||||||  |||||||| || |||||| ||||||  |||||||||||| |||| ||||| | ||||||| ||||    
T  2589 aaaaattttattaataaattccaacaaataagaaggggttcattgtggaaccctaatcaag-aggtttagttgctcatggcaacatatatcataagaaaa 2687  T
Q  228 caataggaaaaatataccctagaga 252  Q
     |||| |||||  ||||||||||||    
T  2688 taata-gaaaatcataccctagaga 2711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0624 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 4607 - 4714
Alignment:
Q  130 aaacttcattaatagaatccaaaaaataagattgggttcatcgtagaacccaaatcaaataggtttagttgcacatgacaacaaacatcataacaaaaca 229  Q
    |||||| ||||||| ||| ||| ||||||||   |||||||| ||||||| || ||||| |||||||||||  | ||  |||||||||||| ||||||||    
T  4607 aaactttattaataaaattcaacaaataagaaatggttcatcttagaacctaa-tcaaaaaggtttagttgttcgtggtaacaaacatcattacaaaaca 4705  T
Q  230 ataggaaaa 238  Q
    |||| ||||    
T  4706 atagaaaaa 4714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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