View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15426_high_16 (Length: 410)
Name: NF15426_high_16
Description: NF15426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15426_high_16 |
 |  |
|
| [»] scaffold0516 (1 HSPs) |
 |  |  |
|
| [»] scaffold0182 (1 HSPs) |
 |  |  |
|
| [»] scaffold0316 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 161 - 395
Target Start/End: Complemental strand, 35870472 - 35870238
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
35870472 |
atgaataattttaaaatgtaacctctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagttttcgc |
35870373 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35870372 |
aactgatggaaaatgaaagatagatagtaaggaatgactagtaaagaatcaagaagaaaagatagccacatggcataagtatgagagattagttagaaag |
35870273 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |
|
|
| T |
35870272 |
gggggcattggtaaggtgacacatagaaaaaatgt |
35870238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 161 - 394
Target Start/End: Complemental strand, 48266393 - 48266163
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
48266393 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagt-aagtaaatggagagtttttgc |
48266295 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
48266294 |
aactgatggaaaatgaaagatagatagtaaggaatgactagtaaagaatcaagaagaaaagatagccacatgacataagtat--gagattagttagaaag |
48266197 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacataggaaaaatg |
394 |
Q |
| |
|
|||||||| | |||||||||||||| |||||||| |
|
|
| T |
48266196 |
gggggcatagataaggtgacacataagaaaaatg |
48266163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 161 - 363
Target Start/End: Complemental strand, 26215414 - 26215211
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
26215414 |
atgaataattttaaaatgtaacccctcgctattaataaaatggattataacacattcattgtgtaacttccatgaagtgaagtaaatggagagtttttcc |
26215315 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaaga-tagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaa |
359 |
Q |
| |
|
|| |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
26215314 |
aattgatggaaaatgaaagattagatagtaaggaatggctagcaaagaatcaagaacaaaagagagccacatggcataagtatgagagattagttacaaa |
26215215 |
T |
 |
| Q |
360 |
aggg |
363 |
Q |
| |
|
|||| |
|
|
| T |
26215214 |
aggg |
26215211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 52349852 - 52349726
Alignment:
| Q |
164 |
aataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgtaac |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
52349852 |
aataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgtaac |
52349753 |
T |
 |
| Q |
264 |
tgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
52349752 |
tgatggaaaatgaaagatagatagtaa |
52349726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 35871294 - 35871149
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
35871294 |
atcatcaaaacatgattttgactctccaatttcacgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
35871195 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
35871194 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
35871149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 48267196 - 48267051
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
48267196 |
atcatcaaaacatgattttgactctccaatttcacgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
48267097 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
48267096 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
48267051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 52350685 - 52350540
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
52350685 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
52350586 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
52350585 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
52350540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 5884423 - 5884478
Alignment:
| Q |
204 |
attataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttg |
259 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
5884423 |
attataatgcattcattgtacaacttgcatgaagtgaagtaaatgcagtgcttttg |
5884478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 54945777 - 54945832
Alignment:
| Q |
204 |
attataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttg |
259 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
54945777 |
attataatgcattcattgtacaacttgcatgaagtgaagtaaatgcagtgcttttg |
54945832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 10176713 - 10176750
Alignment:
| Q |
358 |
aaagggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10176713 |
aaagggggcattggtaaggtgacacataggaaaaatgt |
10176750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 54945229 - 54945333
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||||| |||| | || ||||||| |||||||||| | | |||||||| || | | ||||| ||||||||||| |||||||||| |||| |
|
|
| T |
54945229 |
atcatcaaaacatgactttgtctctctaatttcagaaagatcaagagcgttccattagagttttgagtagatatgtgcttctacgattagttaccgaggc |
54945328 |
T |
 |
| Q |
111 |
cttga |
115 |
Q |
| |
|
|||| |
|
|
| T |
54945329 |
attga |
54945333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 161 - 393
Target Start/End: Original strand, 47233835 - 47234066
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
47233835 |
atgaataattttaaaatgtaaccccttaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatgaagtgtttttgc |
47233934 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
47233935 |
aactgatggaaaatgaaagatagatagtaaggaatgactagtaaagaatcaagaacaaaagatagccacatgacataagtatgagagattagttag-aaa |
47234033 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacataggaaaaat |
393 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
47234034 |
gggggcattggtaaagtgacacataggaaaaat |
47234066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 161 - 360
Target Start/End: Complemental strand, 44393797 - 44393597
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||| |
|
|
| T |
44393797 |
atgaataattttaaaatgaaacccctcactattaataaaatggattataatacattcattgtgtaacttccatgaagtgaagtaaatagagagtttttcc |
44393698 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaaga-tagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaa |
359 |
Q |
| |
|
|| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||| | | |||||||| ||| |
|
|
| T |
44393697 |
aattgatgggaaatgaaagattagatagtaagaaatgactagtaaagaatcaagaacaaaagagagccacatgacataagtataaaaaattagttacaaa |
44393598 |
T |
 |
| Q |
360 |
a |
360 |
Q |
| |
|
| |
|
|
| T |
44393597 |
a |
44393597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 25419588 - 25419717
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
25419588 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgt |
25419687 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
25419688 |
aactgatggaaaatgaaagatagatagtaa |
25419717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 39066883 - 39067012
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39066883 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgt |
39066982 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
39066983 |
aactgatggaaaatgaaagatagatagtaa |
39067012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 5768077 - 5768206
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5768077 |
atgaataattttaaaatgtaacccctcaatattaataaaattgattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgt |
5768176 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
5768177 |
aactgatggaaaatgaaagatagatagtaa |
5768206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 25418758 - 25418903
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
25418758 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
25418857 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
25418858 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
25418903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 47233012 - 47233156
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||||||||||| | ||||||| ||||||| |||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
47233012 |
atcatcaaaacatgattttgactctccaatt-cacgaaggtcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
47233110 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||| ||| ||||||| |||||||||||| |
|
|
| T |
47233111 |
cttgaatagatgtgtgcttccacaattagttacctaggatacttga |
47233156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 47932975 - 47933030
Alignment:
| Q |
204 |
attataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttg |
259 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
47932975 |
attataatgcattcattgtacaacttgcatgaagtgaagtaaatgcagtgcttttg |
47933030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 47932427 - 47932531
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||||| |||| | || ||||||| |||||||||| | | |||||||| || | | ||||| ||||||||||| |||||||||| |||| |
|
|
| T |
47932427 |
atcatcaaaacatgactttgtctctctaatttcagaaagatcaagagcgttccattagagttttgagtagatatgtgcttctacgattagttaccgaggc |
47932526 |
T |
 |
| Q |
111 |
cttga |
115 |
Q |
| |
|
|||| |
|
|
| T |
47932527 |
attga |
47932531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 44394515 - 44394471
Alignment:
| Q |
112 |
ttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
44394515 |
ttgaatagatgtgtacttctacaattagttatctaggatacttga |
44394471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 161 - 395
Target Start/End: Original strand, 8150504 - 8150738
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
8150504 |
atgaataattttaaaatgtaacccctcaatattaataaaattgattataatgcattcattgtgtaactcgcataaagtgaagtaaatggagtgtttttgc |
8150603 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
8150604 |
aactgatgggaaatgaaagatagatagtaagaaatggctagtaaagaatcaagaacaaaagtgagtcacatggcataagtatgagagattagttagaaag |
8150703 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||| |
|
|
| T |
8150704 |
gggggcattggtaaggtgacacatatgcaaaatgt |
8150738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 161 - 387
Target Start/End: Complemental strand, 10186483 - 10186257
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||| |
|
|
| T |
10186483 |
atgaacaattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcaagaagtgaggtaaatgaaatgtttttgc |
10186384 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||||||| |||| |||||||||||| |
|
|
| T |
10186383 |
aactgataggaaatgaaagatagatagtaaggaatgactagtaaagaatcaagaacaaaagagagtcacttggcataagtaagagatattagttagaaag |
10186284 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacatagg |
387 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
10186283 |
gggggcattggtaaggtgacacatagg |
10186257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 161 - 387
Target Start/End: Complemental strand, 4138453 - 4138220
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| |
|
|
| T |
4138453 |
atgaacaattttaaaacgtaacccctcaatattaataaaatagattataatgcattcattgtgtaacttgcaagaagtgaagtaaatgaaatgtttttgc |
4138354 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagat-------agatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagt |
353 |
Q |
| |
|
||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
4138353 |
aacggataggaaatgaaagatgaaagatagatagtagagaatggctagtaaagaatcaagaacaaaagagagccacttggcataagtatgagagattagt |
4138254 |
T |
 |
| Q |
354 |
tagaaaagggggcattggtaaggtgacacatagg |
387 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
4138253 |
tagaaaggggggcattggtaaggtgacacatagg |
4138220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 161 - 360
Target Start/End: Complemental strand, 20172087 - 20171887
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||| |
|
|
| T |
20172087 |
atgaataattttaaaatgaaacccctcactattaataaaatggattataatacattcattgtgtaacttccatgaagtgaagtaaatagagagtttttcc |
20171988 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaaga-tagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaa |
359 |
Q |
| |
|
|| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||| | | |||||||| ||| |
|
|
| T |
20171987 |
aattgatgggaaatgaaagattagatagtaagaaatgactagtaaagaatcaagaacaaaagagagccacatgacataagtataaaaaattagttacaaa |
20171888 |
T |
 |
| Q |
360 |
a |
360 |
Q |
| |
|
| |
|
|
| T |
20171887 |
a |
20171887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 28843874 - 28843729
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28843874 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
28843775 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
28843774 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
28843729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 918180 - 918322
Alignment:
| Q |
14 |
atcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggcctt |
113 |
Q |
| |
|
|||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
918180 |
atcaaaacatgattttgactctccaattttacgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggcctt |
918279 |
T |
 |
| Q |
114 |
gaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||| | |||||||| ||||||| |||||||||||| |
|
|
| T |
918280 |
gaatagatgcgtacttctacaattagttacctaggatacttga |
918322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 215 - 363
Target Start/End: Original strand, 11428184 - 11428333
Alignment:
| Q |
215 |
ttcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgtaactgatgggaaatgaaagat-agatagtaaggaatggctagtaaagaatcaag |
313 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11428184 |
ttcattgtgtaacttccatgaagtgaagtaaatggatagtttttccaattgatggaaaatgaaagattagatagtaaggaatggctagtaaagaatcaag |
11428283 |
T |
 |
| Q |
314 |
aacaaaagatagccacatggcataagtatgagagattagttagaaaaggg |
363 |
Q |
| |
|
||||||||| ||||||| ||||||||||||| | |||||||| ||||||| |
|
|
| T |
11428284 |
aacaaaagagagccacaaggcataagtatgaaaaattagttacaaaaggg |
11428333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 10187265 - 10187167
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
||||||||||||||||||||| | | ||||||||||||||| ||||||| ||||||||||| | || ||||||||||||||||||||| ||||||||| |
|
|
| T |
10187265 |
atcatcaaaacatgattttgactcttcaatttcacgaagatttagaacattccattagaattttgaaaagatgtgtgcttctacaattatttacctagg |
10187167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 4139195 - 4139097
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
||||||||||||||||||||| | | ||||||||||||||| ||||||| | ||||||||| | || ||||||||||||||||||||| ||||||||| |
|
|
| T |
4139195 |
atcatcaaaacatgattttgactcttcaatttcacgaagatatagaacattcaattagaattttgaaaagatgtgtgcttctacaattatttacctagg |
4139097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 918968 - 919018
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataat |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
918968 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataat |
919018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 11427459 - 11427492
Alignment:
| Q |
76 |
aatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
11427459 |
aatagatgtgtacttctacaattagttacctagg |
11427492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 395
Target Start/End: Original strand, 14597489 - 14597534
Alignment:
| Q |
350 |
tagttagaaaagggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||| ||||| ||||||| |
|
|
| T |
14597489 |
tagttagaaaggggggaattggtaaggtgacatataggcaaaatgt |
14597534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 20172804 - 20172760
Alignment:
| Q |
112 |
ttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
20172804 |
ttgaatagatgtgtacttctacaattagttatctaggatacttga |
20172760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 23)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 161 - 395
Target Start/End: Original strand, 53830518 - 53830756
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
53830518 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatagagtgtttttgc |
53830617 |
T |
 |
| Q |
261 |
aactgatgggaaatgaa----agatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttag |
356 |
Q |
| |
|
||| ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53830618 |
aaccgatggaaaatgaaagatagatagatagtaaggaacggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttaa |
53830717 |
T |
 |
| Q |
357 |
aaaagggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
53830718 |
aaaggggggcatcggtaaggtgacacataggaaaaatgt |
53830756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 161 - 387
Target Start/End: Complemental strand, 21803025 - 21802799
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| |
|
|
| T |
21803025 |
atgaacaattttaaaacgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcaagaagtgaagtaaatgaaatgtttttgc |
21802926 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21802925 |
aactgataggaaatgaaagatagatagtaatgaatggctagtaaagaatcaagaacaaaagagagccacttggcataagtatgagagattagttagaaag |
21802826 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacatagg |
387 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
21802825 |
gggggcattggtaaggtgacacatagg |
21802799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 161 - 395
Target Start/End: Original strand, 34737812 - 34738046
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34737812 |
atgaataattttaaaatgtaacccctcattgttaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtagatggagtgtttttgc |
34737911 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
34737912 |
aactgatggaaaatgaaagatagattgtacggaatggctagtaaagaatcaagaacaaaagagatccacatggcataagtatgagagattagttagaaag |
34738011 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
|| |||||||||||||||||||||| | ||||||| |
|
|
| T |
34738012 |
ggaggcattggtaaggtgacacatatgcaaaatgt |
34738046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 161 - 395
Target Start/End: Original strand, 21632782 - 21633017
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgttttt-g |
259 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||||| | ||||||| | |
|
|
| T |
21632782 |
atgaacaattttaaaacataacccctcaatattaataaaatggatcataatgcattcatcgtgtaacttgcaagaagtgaagtaaatgaaatgttttttg |
21632881 |
T |
 |
| Q |
260 |
taactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaa |
359 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21632882 |
caactgatagaaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagagcgccacttggcataagtatgagagattagttagaaa |
21632981 |
T |
 |
| Q |
360 |
agggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
21632982 |
ggggggtattggtaaggtgacacataggcaaaatgt |
21633017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 161 - 360
Target Start/End: Complemental strand, 5430842 - 5430639
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatatta---atgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttt |
257 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
5430842 |
atgaataattttaaaatgtaacccctcactattattaataaaatggattataatacattcattgtgtaacttccatgaagtgaagtaaatggagagtttt |
5430743 |
T |
 |
| Q |
258 |
tgtaactgatgggaaatgaaagat-agatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttag |
356 |
Q |
| |
|
| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |
|
|
| T |
5430742 |
tccaattgatgggaaatgaaagattagatagtaaggaatggctagtaaagaatcaagaacaaaagagagccacatggcataagtatgaaaaattagttac |
5430643 |
T |
 |
| Q |
357 |
aaaa |
360 |
Q |
| |
|
|||| |
|
|
| T |
5430642 |
aaaa |
5430639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 164 - 342
Target Start/End: Original strand, 2500660 - 2500838
Alignment:
| Q |
164 |
aataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgtaac |
263 |
Q |
| |
|
|||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||| |
|
|
| T |
2500660 |
aataattttaaaatgtaaccgcacaatattaataaaatggattataatgcattcattgtgcaacttgcatgaagtgaagtaaatggtgtatttttgcaac |
2500759 |
T |
 |
| Q |
264 |
tgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtat |
342 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2500760 |
ggatgggaaatgaaagataaatagtaaggaatgattagtagggaatcaagaacaaaagagagccacatggcataagtat |
2500838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 2505014 - 2505143
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2505014 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgt |
2505113 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
2505114 |
aactgatggaaaatgaaagatagatagtaa |
2505143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 34737014 - 34737145
Alignment:
| Q |
25 |
attttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggccttgaatagatgtg |
124 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34737014 |
attttgaatctccaatttcacgaagatcaaaaacataccattagaattttgaatagatgtgtgcttctacaattagttacctaggccttgaatagatgtg |
34737113 |
T |
 |
| Q |
125 |
cgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
34737114 |
tgcttctacaattagttatataggatacttga |
34737145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 46092432 - 46092306
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
46092432 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggcaagtttttgt |
46092333 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatag |
287 |
Q |
| |
|
||| ||||| ||||||||||||||||| |
|
|
| T |
46092332 |
aaccgatggaaaatgaaagatagatag |
46092306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 46134957 - 46134831
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
46134957 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggcaagtttttgt |
46134858 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatag |
287 |
Q |
| |
|
||| ||||| ||||||||||||||||| |
|
|
| T |
46134857 |
aaccgatggaaaatgaaagatagatag |
46134831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 2504183 - 2504328
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2504183 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
2504282 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
2504283 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
2504328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 161 - 322
Target Start/End: Complemental strand, 20036412 - 20036251
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtg-tttttg |
259 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||| || |||| ||||| |
|
|
| T |
20036412 |
atgattaattttaaaatgtaactgctcaatattaataaaatgaattataatgcattcattatgcaacttgcatgaagtgaagtaactgaagtgtttttta |
20036313 |
T |
 |
| Q |
260 |
taactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaaga |
322 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||| |
|
|
| T |
20036312 |
catctgatgggaaatgaaagatagatagtaatgaatgactagtaaagaat-aagaacaaaaga |
20036251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 46093257 - 46093116
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||| |||| | |||||||| |||||||||||||||||||||||||| |
|
|
| T |
46093257 |
atcatcaaaacatgattttgactctccaatttcatgaagatcaagaacattccattaaaattttgaatagatgagtgcttctacaattagttacctaggc |
46093158 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatac |
152 |
Q |
| |
|
|||||||||||||| | ||||||| ||||||| |||||||| |
|
|
| T |
46093157 |
cttgaatagatgtgtgtttctacaattagttacctaggatac |
46093116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 2499943 - 2500045
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
2499943 |
atcatcaaaacatgattttgtttctccaatttcacgaagatcaagaacattccattagaattttgaatagatgtctgcttctacaattagttacctaggc |
2500042 |
T |
 |
| Q |
111 |
ctt |
113 |
Q |
| |
|
||| |
|
|
| T |
2500043 |
ctt |
2500045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 53829732 - 53829830
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
53829732 |
atcatcgaaacatgattttgaatctccaatttcacgaagatcaagaacattcctttagaattttgaatagatgtgtgcttctacaattagttacctagg |
53829830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 20037200 - 20037079
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
20037200 |
atcatcaaaacatgattttg--tctccaatttcacgaagatcaagaaagttccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
20037103 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctaca |
134 |
Q |
| |
|
|||||||| ||| ||||||||| |
|
|
| T |
20037102 |
attgaataggcgtgtgcttctaca |
20037079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 21803810 - 21803712
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
||||||||||||||||||||| | | |||||||||||||||| ||||||| ||||||||||| | || ||||||||||||||||||||| |||| |||| |
|
|
| T |
21803810 |
atcatcaaaacatgattttgactcttcaatttcacgaagatctagaacattccattagaattttgaaaagatgtgtgcttctacaattatttacgtagg |
21803712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 21631997 - 21632095
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
||||||||||||||||||||| | | ||||||||||||||||||| |||| ||||||||||| | || | | ||||||||||||||||| ||||||||| |
|
|
| T |
21631997 |
atcatcaaaacatgattttgactcttcaatttcacgaagatcaagcacattccattagaattttgaaaaaaagtgtgcttctacaattatttacctagg |
21632095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 27256640 - 27256595
Alignment:
| Q |
350 |
tagttagaaaagggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27256640 |
tagttagaaaggggggcattggtaaggtgacacataggaaaaatgt |
27256595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 43943520 - 43943465
Alignment:
| Q |
204 |
attataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttg |
259 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
43943520 |
attataatgcattcattgtacaacttgcatgaagtgaagtaaatgcagtgcttttg |
43943465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 51868360 - 51868315
Alignment:
| Q |
350 |
tagttagaaaagggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| | ||||||| |
|
|
| T |
51868360 |
tagttagaaaggggggcattggtaaggtgacacataagcaaaatgt |
51868315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 5431561 - 5431528
Alignment:
| Q |
76 |
aatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
5431561 |
aatagatgtgtacttctacaattagttacctagg |
5431528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 53829794 - 53829838
Alignment:
| Q |
112 |
ttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
53829794 |
ttgaatagatgtgtgcttctacaattagttacctaggatacttga |
53829838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 161 - 395
Target Start/End: Original strand, 21605080 - 21605313
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21605080 |
atgaataattttaaaatttaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatgaagtgtttttgc |
21605179 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
| | |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
21605180 |
agccaatggaaaatgaaagatagatagtaaggaatgactaataaagaatcaagaacaaaagatagccacatgacataagtatgagagattagttag-aaa |
21605278 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21605279 |
gggggtattggtaaggtgacacataggaaaaatgt |
21605313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 161 - 395
Target Start/End: Original strand, 37302001 - 37302235
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37302001 |
atgaataattttaaaatgtaaccctccattattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgc |
37302100 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
|| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||| |
|
|
| T |
37302101 |
aaatgatgggaaatgaaagatagattgtacggaatggctagtaaagaatcaagaacaaaagagatccacatggcataagtataagagattagttagaaag |
37302200 |
T |
 |
| Q |
361 |
gggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
| | |||||||||||||||||||| | ||||||| |
|
|
| T |
37302201 |
gaagtcattggtaaggtgacacatatgcaaaatgt |
37302235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 37301100 - 37301247
Alignment:
| Q |
9 |
acatcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctag |
108 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
37301100 |
acatcatcaaaacatgattttgaatctccaatttcacgaagatcaagaacataccattagaattttgaatagatgtgtgcttctacaattagttacctag |
37301199 |
T |
 |
| Q |
109 |
gccttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||| ||||||||| |
|
|
| T |
37301200 |
gccttgaatagatgtgtgcttctacaattagttatataagatacttga |
37301247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 161 - 290
Target Start/End: Complemental strand, 36991172 - 36991043
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
36991172 |
atgaataattttaaaatgtaacccctcaatattaataaaatagattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgt |
36991073 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
36991072 |
aactgatggaaaatgaaagatagatagtaa |
36991043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 21604317 - 21604464
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatca--agaacataccattagaattctaaatagatgtgtgcttctacaattagttacctag |
108 |
Q |
| |
|
||||||||||||||||||||| | || |||||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
21604317 |
atcatcaaaacatgattttgactctctaatttcacgaagatcataagaacatttcattagaattttgaatagatgtgtgcttctacaattagttacctag |
21604416 |
T |
 |
| Q |
109 |
gccttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
21604417 |
accttgaatagatgtgtgcttctacaattagttacctaggatacttga |
21604464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 36992000 - 36991859
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||| |||| | |||||||| ||||||||||||||| |||||||| | |
|
|
| T |
36992000 |
atcatcaaaacatgattttgactctccaatttcatgaagatcaagaacattccattaaaattttgaatagatgagtgcttctacaattatttacctagac |
36991901 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatac |
152 |
Q |
| |
|
|||||||||||||| | ||||||| ||||||| |||||||| |
|
|
| T |
36991900 |
cttgaatagatgtgtgtttctacaattagttacctaggatac |
36991859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 178; Significance: 7e-96; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 161 - 395
Target Start/End: Original strand, 41646721 - 41646953
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
41646721 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattaaaatacattcattgtgtaacttgcatgaaatgaagtaaatggagtgtttttgc |
41646820 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
41646821 |
aaccgatggaaaatgaaagata---agtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttaaaaag |
41646917 |
T |
 |
| Q |
361 |
ggggg-cattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |
|
|
| T |
41646918 |
gggggacattggtaaggtgacacataggaaaaatgt |
41646953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 7574104 - 7574233
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7574104 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgt |
7574203 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
7574204 |
aactgatggaaaatgaaagatagatagtaa |
7574233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 16668699 - 16668828
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
16668699 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattatgtaacttgcatgaagtgaagtaaatggagagtttttgt |
16668798 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
16668799 |
aactgatggaaaatgaaagatagatagtaa |
16668828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 7573274 - 7573419
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7573274 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
7573373 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
7573374 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
7573419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 16667869 - 16668014
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16667869 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
16667968 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
16667969 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
16668014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 41645890 - 41646035
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||||||||||| | |||||||||| |||||||||||||| ||||||||||| | |||||||| ||||||||||||||||||||||||| |
|
|
| T |
41645890 |
atcatcaaaacatgattttgactctccaatttcagaaagatcaagaacattccattagaattttgaatagatggatgcttctacaattagttacctaggc |
41645989 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||| || ||||||||| |
|
|
| T |
41645990 |
cttgaatagatgcgtgcttctacaattagttacctatgatacttga |
41646035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 43565067 - 43564925
Alignment:
| Q |
14 |
atcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggcctt |
113 |
Q |
| |
|
|||||||||||||||||| | |||||||| | |||||| |||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
43565067 |
atcaaaacatgattttgactgtccaattttatgaagatgaagaacattccattagaattttgaatagatatgtgcttctacaattagttacctaggactt |
43564968 |
T |
 |
| Q |
114 |
gaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||||| ||||||||| ||||||| || ||||||||| |
|
|
| T |
43564967 |
gaatagatgtgtgcttctacaattagttacctatgatacttga |
43564925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 29456275 - 29456134
Alignment:
| Q |
14 |
atcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggcctt |
113 |
Q |
| |
|
|||||||||||||||||| | |||| ||| |||||||| |||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
29456275 |
atcaaaacatgattttgactctccatttt-acgaagatgaagaacattccattagaattttgaatagatatgtgcttctacaattagttacctaggactt |
29456177 |
T |
 |
| Q |
114 |
gaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||||| ||||||||| ||||||| || ||||||||| |
|
|
| T |
29456176 |
gaatagatgtgtgcttctacaattagttacctaagatacttga |
29456134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 43564288 - 43564238
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataat |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
43564288 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataat |
43564238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 29455498 - 29455448
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataat |
211 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
29455498 |
atgaataattttaaaatgtaacccctcgatattaataaaatggattataat |
29455448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 395
Target Start/End: Original strand, 37904075 - 37904122
Alignment:
| Q |
348 |
attagttagaaaagggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
|||||||||| | |||||||||||| |||||||||||||||||||||| |
|
|
| T |
37904075 |
attagttagagaggggggcattggtgaggtgacacataggaaaaatgt |
37904122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 5968165 - 5968209
Alignment:
| Q |
112 |
ttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||||||||||| ||||||||| |||||||| |||||||||||| |
|
|
| T |
5968165 |
ttgaatagatgtgtgcttctacaattagttatctaggatacttga |
5968209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 5968168 - 5968201
Alignment:
| Q |
76 |
aatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
5968168 |
aatagatgtgtgcttctacaattagttatctagg |
5968201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0516 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0516
Description:
Target: scaffold0516; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 161 - 395
Target Start/End: Complemental strand, 3376 - 3141
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
3376 |
atgaataattttaaaatgtaaccgcttaatattaataaaatggattataattcaatcattgtgcaacttgcatgaagtgaagtaaatgaagtgtttttgc |
3277 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
3276 |
aactgatgggaaatgaaagataaatagtaaagaatggctagtaaagaatcaagaacaaaagagagccacatgacataagtatgagagattagttacaaaa |
3177 |
T |
 |
| Q |
361 |
ggg-ggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
||| | | ||||| | |||||||||| | ||||||| |
|
|
| T |
3176 |
gggagacgttggtgaagtgacacataagtaaaatgt |
3141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 161 - 359
Target Start/End: Original strand, 22912541 - 22912739
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||| |||||| |||| ||||||||||||||||||||||| || |
|
|
| T |
22912541 |
atgaataattttaaaatgtaactcctca-tattaataaaatggtttataatgcattcattttgtaacatgcaagaagtgaagtaaatggagtgtttctgc |
22912639 |
T |
 |
| Q |
261 |
aac-tgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaa |
359 |
Q |
| |
|
||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22912640 |
aacctgatgggaaatgaaagataaataataaggaatggctagtaaagaatcaagaacaaaagagagccacatggcataagtatgagagattagttagaaa |
22912739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 161 - 290
Target Start/End: Complemental strand, 13786358 - 13786229
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13786358 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgt |
13786259 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
13786258 |
aactgatggaaaatgaaagatagatagtaa |
13786229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 161 - 363
Target Start/End: Original strand, 23726038 - 23726239
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| |
|
|
| T |
23726038 |
atgaataattt-aaaatgtaaccgtttaatattaataaaatggattataattcattcattgtgcaacttgcatgaaatgaagtaaatgaagtgtttttgc |
23726136 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaaggaatggctagtaaagaatcaagaacaaaagatagccacatggcataagtatgagagattagttagaaaa |
360 |
Q |
| |
|
||| |||| |||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||| |
|
|
| T |
23726137 |
aacagatgaaaaatgaaagatagatagtaaagaatgaccagtaaagaatcaagaacaaaagagagccatataacataagtatgagagattagttacaaaa |
23726236 |
T |
 |
| Q |
361 |
ggg |
363 |
Q |
| |
|
||| |
|
|
| T |
23726237 |
ggg |
23726239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 25807785 - 25807914
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
25807785 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggaaagtttttgt |
25807884 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
|| |||||| |||||||||||||||||||| |
|
|
| T |
25807885 |
aattgatggaaaatgaaagatagatagtaa |
25807914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 13787188 - 13787043
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
13787188 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
13787089 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
13787088 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
13787043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 25806954 - 25807099
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
25806954 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
25807053 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
25807054 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
25807099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 22911841 - 22911983
Alignment:
| Q |
14 |
atcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggcctt |
113 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
22911841 |
atcaaaacatgattttgactctccaatttcacgaagatcaagaacattccattagaattttgaatagatgcatgcttctacaatttgttacctaggcctt |
22911940 |
T |
 |
| Q |
114 |
gaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
||||| ||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
22911941 |
gaataaatgtgtgcttctacaattagttacctaggatacttga |
22911983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 39624392 - 39624248
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
|||||||||||||||||||| | |||||||| ||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||| ||||| |
|
|
| T |
39624392 |
atcatcaaaacatgattttgtctctccaattttacgaagatcaagaacatgccattaaaattttgaatagatgtgtgcttctacaattagttatgtaggc |
39624293 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttg |
155 |
Q |
| |
|
|||||||| ||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
39624292 |
cttgaatatatgtgtgcttctacaattagttacctaggatacttg |
39624248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 118; Significance: 4e-60; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 13433466 - 13433595
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatattaatgaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13433466 |
atgaataattttaaaatgtaacccctcaatattaataaaatggattataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagagtttttgt |
13433565 |
T |
 |
| Q |
261 |
aactgatgggaaatgaaagatagatagtaa |
290 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
13433566 |
aactgatggaaaatgaaagatagatagtaa |
13433595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 13432636 - 13432781
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
13432636 |
atcatcaaaacataattttgactctccaatttcatgaagatcaagaacattccattagaattttgaatagatgtgtgcttctacaattagttacctaggc |
13432735 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttga |
156 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
13432736 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttga |
13432781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 18883503 - 18883359
Alignment:
| Q |
11 |
atcatcaaaacatgattttgaatatccaatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctaggc |
110 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||| ||||| |
|
|
| T |
18883503 |
atcatcaaaacatgattttgtctctccaatttcacgaagatcaagaacatgccattaaaattttgaatagatgtgtgcttctacaattagttatgtaggc |
18883404 |
T |
 |
| Q |
111 |
cttgaatagatgtgcgcttctacatttagttatataggatacttg |
155 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
18883403 |
cttgaatagatgtgtgcttctacaattagttacctaggatacttg |
18883359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 16857290 - 16857235
Alignment:
| Q |
204 |
attataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttg |
259 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
16857290 |
attataatgcattcattgtacaacttgcatgaagtgaagtaaatgcagtgcttttg |
16857235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 16711405 - 16711440
Alignment:
| Q |
74 |
taaatagatgtgtgcttctacaattagttacctagg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
16711405 |
taaatagatgtgtgcttctacaattagttacctagg |
16711440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 26615320 - 26615377
Alignment:
| Q |
204 |
attataatgcattcattgtgtaac--ttgcatgaagtgaagtaaatggagtgtttttg |
259 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
26615320 |
attataatgcattcattgtacaacaattgcatgaagtgaagtaaatgaagtgtttttg |
26615377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 26720593 - 26720663
Alignment:
| Q |
38 |
aatttcacgaagatcaagaacataccattagaattctaaatagatgtgtgcttctacaattagttacctag |
108 |
Q |
| |
|
||||||| |||||||||| ||| |||||||| || | ||||||||||||||||||||||||||||||| |
|
|
| T |
26720593 |
aatttcagaaagatcaagagcattccattagagttttgtgtagatgtgtgcttctacaattagttacctag |
26720663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 26721248 - 26721305
Alignment:
| Q |
204 |
attataatgcattcattgtgtaac--ttgcatgaagtgaagtaaatggagtgtttttg |
259 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
26721248 |
attataatgcattcattgtacaacaattgcatgaagtgaagtaaatgaagtgtttttg |
26721305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 16712122 - 16712155
Alignment:
| Q |
161 |
atgaataattttaaaatgtaacccctcaatatta |
194 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
16712122 |
atgaataattttaaaatgtaacccctcactatta |
16712155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 10171 - 10226
Alignment:
| Q |
204 |
attataatgcattcattgtgtaacttgcatgaagtgaagtaaatggagtgtttttg |
259 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
10171 |
attataatgcattcattgcacaacttgcatgaagtgaagtaaatgcagtgcttttg |
10226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0316 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0316
Description:
Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 395
Target Start/End: Original strand, 5480 - 5522
Alignment:
| Q |
353 |
ttagaaaagggggcattggtaaggtgacacataggaaaaatgt |
395 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
5480 |
ttagaaaggggaacattggtaaggtgacacataggaaaaatgt |
5522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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