View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15426_high_20 (Length: 334)
Name: NF15426_high_20
Description: NF15426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15426_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 18 - 325
Target Start/End: Complemental strand, 6063519 - 6063212
Alignment:
| Q |
18 |
agtgttagtcaattcattcatttaataataagttagattattgctttggctaataaaaaacagacaacaaacatttatattatgaaggtaaatgtaaagg |
117 |
Q |
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| T |
6063519 |
agtgttagtcaattcattcatgtaataataagttagattattgctttggctaataaaaaacagacaacaaacatttatgttatgaaggtaaatgtaaagg |
6063420 |
T |
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| Q |
118 |
atacatttttcttatgttgcaaactttctaaattgtaaagtaggtggttacatttcttttccacatctttgtcttttagttggtgctaatttgagaaagt |
217 |
Q |
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| T |
6063419 |
atacatttttcttatgttgcaaactttctaaattgtaaagtagttggttacatttcttttccacatctttgtcttttagttggtgctaatttgagaaagt |
6063320 |
T |
|
| Q |
218 |
ttccatagccagtgattgatgctttttattttagtgtagagtatagactatcctccaaagtaagctaagataattgcaacgtactactaatgtttagagt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6063319 |
ttccatagccagtgattgatgctttttattttagtgtagagtatagactatcctccaaagtaagctaagataattgcaacgtactactaatgtttagagt |
6063220 |
T |
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| Q |
318 |
agaataat |
325 |
Q |
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||| |||| |
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| T |
6063219 |
agagtaat |
6063212 |
T |
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