View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15426_high_22 (Length: 323)
Name: NF15426_high_22
Description: NF15426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15426_high_22 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 10 - 323
Target Start/End: Original strand, 43665673 - 43665982
Alignment:
| Q |
10 |
gcagagaaaaggtaaaactaaaacaaattctgaaaagtttgaacactatacacatccaatcattcatgaccagtaaccactacattgattatggttgatc |
109 |
Q |
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| T |
43665673 |
gcagagaaaaggtaaaactaaaacaaattctgaaaagtttgaacactatacacatccaatcattcatgaccagtaaccactacattgattatggttgatc |
43665772 |
T |
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| Q |
110 |
tggaagatgactcagtctaaactagaactacttaaaagacattctacaaactctaaaggaaagtgctaatttcagcttcaaagaagaaagcagtgctgat |
209 |
Q |
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| T |
43665773 |
tggaagatgactcagtctaaactagaactacttaaaagacattctacaaactctaaagtaaagtgctaatttcagcttcaaagaagaaagcagtgctgat |
43665872 |
T |
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| Q |
210 |
taaattaattagctaacctccctataattacgcaccaaaccttcaggttccagtggtgctatagttacaattgtttcgggcaccggaaacaacataggtt |
309 |
Q |
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| T |
43665873 |
ta----aattagctaacctccctataattacgcaccaaaccttcaggttccagtggtgctatagttacaattgtttcgggcaccggaaacaacataggtt |
43665968 |
T |
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| Q |
310 |
gtggttgggatgaa |
323 |
Q |
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| T |
43665969 |
gtggttgggatgaa |
43665982 |
T |
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