View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15426_high_37 (Length: 240)
Name: NF15426_high_37
Description: NF15426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15426_high_37 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 52245154 - 52245358
Alignment:
| Q |
17 |
cacagattcagctgcaaaaatagtcatgagaaacaaaaacctaggtctagaggaatttagattcctccttaaaaccatggttagttcaggaatcggtgag |
116 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52245154 |
cacagattcagctgctaaaatagtcatgagaaacaaaaacctaggtctagaggaatttagattcctccttaaaaccatggttagttcaggaatcggtgag |
52245253 |
T |
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| Q |
117 |
aacacatactgtccaagaaacgttcttgaaggaagagaaacatgtccaactctcaaagacacatatgaagagatagatgaaatcatgtttgatacacttg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52245254 |
aacacatactgtccaagaaacgttcttgaaggaagagaaacatgtccaactctcaaagacacatatgaagagatagatgaaatcatgtttgatacacttg |
52245353 |
T |
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| Q |
217 |
acaac |
221 |
Q |
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||||| |
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| T |
52245354 |
acaac |
52245358 |
T |
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