View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15426_low_24 (Length: 339)
Name: NF15426_low_24
Description: NF15426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15426_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 81 - 323
Target Start/End: Original strand, 47364146 - 47364396
Alignment:
| Q |
81 |
atggataaatccattgtgaatgctctaatagaaggggtccatgagatgctcttttaaaatgaaaacaaagtgagtctgtttctttcatgctcctgaagac |
180 |
Q |
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| T |
47364146 |
atggataaatccattgtgaatgctctaatagaaggggtccatgagatgctcttttaaaatgaaaacaaagtgagtctgtttctttcatgctcctgaagac |
47364245 |
T |
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| Q |
181 |
ccgcactttgaaaagaaaaagctcatcatgaagtatatcttg--------atatatgcacattgtagtaactaaaaatctaaagttcaacattcttgggt |
272 |
Q |
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| T |
47364246 |
ccgcactttgaaaagaaaaagctcataatgtagtatatcttgatatatatatatatgcacattgtagtaactaaaaatctaaagttcaacattcttgggt |
47364345 |
T |
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| Q |
273 |
gtcactgtatctgtcagatactacgtacactaaagaatgtttgttgatttc |
323 |
Q |
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| T |
47364346 |
gtcactgtatctgtcagatactacgtacactaaagaatgtttgttgatttc |
47364396 |
T |
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