View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15426_low_31 (Length: 301)

Name: NF15426_low_31
Description: NF15426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15426_low_31
NF15426_low_31
[»] chr6 (31 HSPs)
chr6 (103-280)||(13246269-13246446)
chr6 (32-91)||(21031976-21032035)
chr6 (35-89)||(10039675-10039729)
chr6 (32-89)||(3403986-3404044)
chr6 (32-85)||(3825530-3825583)
chr6 (32-89)||(13579648-13579705)
chr6 (32-92)||(18241850-18241911)
chr6 (1-88)||(30388062-30388149)
chr6 (35-88)||(3403717-3403771)
chr6 (32-88)||(11656779-11656836)
chr6 (34-90)||(33655114-33655170)
chr6 (39-90)||(31598732-31598783)
chr6 (35-89)||(33829636-33829691)
chr6 (33-75)||(30388360-30388402)
chr6 (36-90)||(31598274-31598328)
chr6 (35-88)||(33828990-33829044)
chr6 (32-93)||(23250587-23250648)
chr6 (32-88)||(33971994-33972050)
chr6 (40-89)||(21032285-21032335)
chr6 (32-83)||(2762611-2762664)
chr6 (32-83)||(10039840-10039893)
chr6 (32-89)||(23250889-23250946)
chr6 (35-92)||(29074372-29074429)
chr6 (35-92)||(29079136-29079193)
chr6 (35-92)||(29106945-29107002)
chr6 (32-83)||(12714436-12714488)
chr6 (32-69)||(18242153-18242190)
chr6 (35-88)||(22684358-22684411)
chr6 (35-88)||(22754657-22754710)
chr6 (35-90)||(7654548-7654604)
chr6 (33-83)||(11656608-11656660)
[»] chr3 (41 HSPs)
chr3 (34-93)||(47871121-47871180)
chr3 (32-88)||(10293906-10293963)
chr3 (32-88)||(18875188-18875245)
chr3 (33-88)||(17372298-17372354)
chr3 (32-91)||(20968715-20968775)
chr3 (35-85)||(14015964-14016014)
chr3 (36-89)||(18874881-18874935)
chr3 (35-88)||(20969019-20969073)
chr3 (36-89)||(45060872-45060926)
chr3 (35-88)||(9027033-9027086)
chr3 (39-88)||(42627550-42627599)
chr3 (35-88)||(42672978-42673031)
chr3 (35-90)||(40848519-40848574)
chr3 (35-89)||(47870822-47870877)
chr3 (35-88)||(3353128-3353181)
chr3 (36-89)||(8315083-8315136)
chr3 (35-88)||(24485460-24485513)
chr3 (35-88)||(42673296-42673349)
chr3 (35-87)||(17372594-17372645)
chr3 (41-88)||(45060596-45060644)
chr3 (42-81)||(26540876-26540915)
chr3 (35-89)||(40848961-40849016)
chr3 (35-89)||(48159896-48159951)
chr3 (32-85)||(1101087-1101141)
chr3 (36-89)||(1101182-1101236)
chr3 (35-85)||(1928434-1928484)
chr3 (35-88)||(3644783-3644837)
chr3 (35-85)||(9026739-9026789)
chr3 (36-88)||(1927772-1927825)
chr3 (36-84)||(4947263-4947312)
chr3 (36-88)||(8314013-8314066)
chr3 (32-88)||(10293608-10293665)
chr3 (38-90)||(17441066-17441119)
chr3 (35-88)||(21896511-21896564)
chr3 (32-85)||(26540694-26540747)
chr3 (37-81)||(3353553-3353597)
chr3 (37-83)||(18875017-18875065)
chr3 (36-87)||(22429159-22429211)
chr3 (35-91)||(26007179-26007235)
chr3 (35-90)||(53687886-53687942)
chr3 (36-91)||(53766580-53766636)
[»] chr1 (44 HSPs)
chr1 (32-91)||(13589656-13589715)
chr1 (32-86)||(17518599-17518653)
chr1 (1-91)||(22149400-22149489)
chr1 (32-89)||(41083208-41083265)
chr1 (32-90)||(47955304-47955363)
chr1 (35-92)||(8108993-8109051)
chr1 (32-89)||(17518302-17518359)
chr1 (35-91)||(49284406-49284463)
chr1 (37-91)||(22149701-22149756)
chr1 (34-88)||(20371352-20371406)
chr1 (32-89)||(31848189-31848247)
chr1 (32-89)||(47955605-47955663)
chr1 (35-88)||(48190771-48190825)
chr1 (35-104)||(48191355-48191425)
chr1 (39-88)||(1176717-1176766)
chr1 (33-85)||(8108724-8108777)
chr1 (35-88)||(27172116-27172169)
chr1 (36-88)||(20480613-20480665)
chr1 (35-90)||(20480166-20480221)
chr1 (35-92)||(39692000-39692058)
chr1 (37-87)||(46056904-46056953)
chr1 (33-85)||(1177016-1177069)
chr1 (32-88)||(41082909-41082966)
chr1 (35-88)||(50615621-50615674)
chr1 (35-88)||(50623449-50623502)
chr1 (40-92)||(19007731-19007783)
chr1 (35-89)||(32163043-32163098)
chr1 (35-89)||(44911024-44911079)
chr1 (37-99)||(50429645-50429708)
chr1 (39-89)||(999529-999579)
chr1 (32-85)||(1176839-1176893)
chr1 (35-88)||(6002237-6002291)
chr1 (35-88)||(9347126-9347180)
chr1 (35-89)||(9347551-9347605)
chr1 (35-88)||(48105116-48105170)
chr1 (39-91)||(31847892-31847945)
chr1 (52-85)||(46057210-46057243)
chr1 (35-92)||(47498495-47498552)
chr1 (39-88)||(49317752-49317801)
chr1 (39-88)||(49318170-49318219)
chr1 (35-90)||(4692433-4692489)
chr1 (37-92)||(13918869-13918925)
chr1 (35-90)||(48313792-48313848)
chr1 (35-86)||(50526472-50526524)
[»] chr4 (54 HSPs)
chr4 (32-89)||(3930477-3930534)
chr4 (1-92)||(35393742-35393833)
chr4 (32-92)||(13198903-13198964)
chr4 (32-90)||(18077199-18077258)
chr4 (1-87)||(8488448-8488534)
chr4 (32-89)||(16555514-16555572)
chr4 (35-88)||(16555817-16555871)
chr4 (32-87)||(22681576-22681631)
chr4 (35-89)||(50678778-50678833)
chr4 (35-89)||(56505692-56505747)
chr4 (35-89)||(11241661-11241715)
chr4 (35-92)||(24775783-24775841)
chr4 (35-92)||(36095813-36095871)
chr4 (32-84)||(49178813-49178866)
chr4 (32-88)||(3930179-3930235)
chr4 (32-88)||(27304718-27304773)
chr4 (35-89)||(5205987-5206042)
chr4 (37-103)||(22681881-22681948)
chr4 (35-90)||(26207359-26207414)
chr4 (35-85)||(36096475-36096526)
chr4 (35-94)||(169007-169068)
chr4 (34-90)||(8182171-8182229)
chr4 (35-88)||(50679424-50679478)
chr4 (32-87)||(8181992-8182049)
chr4 (32-88)||(11241389-11241446)
chr4 (32-83)||(27304890-27304943)
chr4 (35-94)||(293217-293277)
chr4 (35-90)||(28196773-28196829)
chr4 (35-90)||(43051252-43051308)
chr4 (32-87)||(7603146-7603200)
chr4 (35-89)||(9023243-9023298)
chr4 (35-89)||(28196345-28196400)
chr4 (35-90)||(48405960-48406015)
chr4 (36-75)||(54509116-54509155)
chr4 (35-88)||(4239366-4239420)
chr4 (38-88)||(7603422-7603472)
chr4 (32-85)||(13198606-13198660)
chr4 (35-89)||(23539840-23539893)
chr4 (35-92)||(32703221-32703279)
chr4 (35-88)||(32703650-32703704)
chr4 (32-83)||(5206132-5206185)
chr4 (36-88)||(5206231-5206283)
chr4 (35-87)||(11529169-11529222)
chr4 (35-87)||(25161879-25161932)
chr4 (35-91)||(26207746-26207803)
chr4 (36-69)||(39415244-39415277)
chr4 (37-85)||(47219203-47219252)
chr4 (35-90)||(9023680-9023736)
chr4 (38-89)||(9380744-9380796)
chr4 (37-83)||(16555695-16555743)
chr4 (39-90)||(39415528-39415580)
chr4 (35-90)||(43050605-43050661)
chr4 (36-99)||(45828983-45829047)
chr4 (36-91)||(54508812-54508868)
[»] scaffold0319 (2 HSPs)
scaffold0319 (32-88)||(6694-6750)
scaffold0319 (32-90)||(6392-6451)
[»] chr2 (45 HSPs)
chr2 (32-99)||(11883612-11883680)
chr2 (32-88)||(11883923-11883980)
chr2 (32-92)||(40469726-40469787)
chr2 (32-91)||(20347461-20347521)
chr2 (35-90)||(24832329-24832385)
chr2 (32-92)||(26737478-26737537)
chr2 (37-88)||(6171156-6171207)
chr2 (32-86)||(18055050-18055103)
chr2 (32-89)||(30190922-30190980)
chr2 (33-91)||(32673141-32673199)
chr2 (35-90)||(18296693-18296749)
chr2 (35-89)||(2639482-2639537)
chr2 (35-89)||(26841586-26841641)
chr2 (37-88)||(40221313-40221364)
chr2 (1-88)||(43495571-43495658)
chr2 (35-96)||(2638812-2638874)
chr2 (35-88)||(26737781-26737835)
chr2 (32-89)||(17346032-17346089)
chr2 (32-88)||(30191222-30191279)
chr2 (32-88)||(40469427-40469484)
chr2 (32-92)||(43495305-43495366)
chr2 (35-90)||(6171456-6171512)
chr2 (37-92)||(6495723-6495779)
chr2 (35-90)||(7980003-7980058)
chr2 (35-89)||(20347162-20347217)
chr2 (32-85)||(15920781-15920835)
chr2 (35-88)||(26842238-26842292)
chr2 (32-85)||(43495481-43495535)
chr2 (32-85)||(17345736-17345788)
chr2 (35-87)||(18296077-18296130)
chr2 (37-100)||(6325349-6325413)
chr2 (35-90)||(37720202-37720258)
chr2 (35-89)||(5378660-5378715)
chr2 (35-85)||(7591204-7591255)
chr2 (35-89)||(41790912-41790967)
chr2 (35-88)||(17850978-17851032)
chr2 (179-280)||(7309116-7309217)
chr2 (35-91)||(8851582-8851639)
chr2 (33-86)||(15321394-15321446)
chr2 (36-83)||(26737657-26737706)
chr2 (36-87)||(6495468-6495519)
chr2 (35-90)||(8851146-8851202)
chr2 (35-87)||(16911269-16911321)
chr2 (35-87)||(18750126-18750178)
chr2 (37-83)||(40469607-40469655)
[»] scaffold0110 (2 HSPs)
scaffold0110 (32-89)||(45804-45861)
scaffold0110 (32-90)||(45535-45593)
[»] chr5 (45 HSPs)
chr5 (1-93)||(18433282-18433375)
chr5 (35-89)||(22428933-22428987)
chr5 (35-89)||(22429196-22429250)
chr5 (35-90)||(26020448-26020504)
chr5 (35-91)||(41383167-41383223)
chr5 (1-88)||(34577130-34577217)
chr5 (35-88)||(18433015-18433069)
chr5 (32-89)||(25175148-25175206)
chr5 (36-88)||(23011079-23011131)
chr5 (34-89)||(25116060-25116116)
chr5 (1-85)||(34576870-34576954)
chr5 (35-88)||(18817611-18817665)
chr5 (33-89)||(25115756-25115813)
chr5 (33-89)||(25174848-25174905)
chr5 (36-88)||(9665828-9665879)
chr5 (35-87)||(22729440-22729492)
chr5 (37-85)||(31569910-31569958)
chr5 (35-91)||(37610199-37610255)
chr5 (35-91)||(37780317-37780373)
chr5 (39-89)||(16466746-16466797)
chr5 (35-89)||(18816951-18817006)
chr5 (35-85)||(9665560-9665609)
chr5 (33-89)||(5187828-5187885)
chr5 (43-88)||(12441320-12441364)
chr5 (36-85)||(23011383-23011432)
chr5 (36-85)||(41382896-41382945)
chr5 (35-92)||(43463752-43463809)
chr5 (37-89)||(43464194-43464246)
chr5 (35-85)||(11351427-11351478)
chr5 (35-89)||(12498566-12498621)
chr5 (35-89)||(12498928-12498983)
chr5 (32-82)||(16726084-16726135)
chr5 (35-93)||(19514963-19515022)
chr5 (35-89)||(26571164-26571219)
chr5 (37-95)||(34147512-34147571)
chr5 (37-88)||(37610620-37610671)
chr5 (35-92)||(5187547-5187605)
chr5 (38-88)||(22729008-22729058)
chr5 (32-89)||(33324835-33324893)
chr5 (36-91)||(9869557-9869611)
chr5 (35-96)||(10098941-10099002)
chr5 (35-91)||(11350805-11350861)
chr5 (58-91)||(22629465-22629498)
chr5 (42-86)||(2817582-2817626)
chr5 (37-88)||(37780744-37780796)
[»] scaffold0192 (1 HSPs)
scaffold0192 (32-90)||(25366-25425)
[»] scaffold0009 (1 HSPs)
scaffold0009 (32-91)||(205684-205743)
[»] scaffold0001 (4 HSPs)
scaffold0001 (32-88)||(438930-438987)
scaffold0001 (32-89)||(439196-439254)
scaffold0001 (32-92)||(183660-183720)
scaffold0001 (36-85)||(183367-183416)
[»] chr8 (48 HSPs)
chr8 (32-88)||(16929239-16929296)
chr8 (35-90)||(13936721-13936776)
chr8 (32-90)||(43246173-43246232)
chr8 (32-89)||(15155882-15155940)
chr8 (32-89)||(16928941-16928999)
chr8 (32-92)||(12281120-12281181)
chr8 (32-88)||(12281423-12281480)
chr8 (1-90)||(18020054-18020142)
chr8 (32-88)||(37752413-37752470)
chr8 (32-88)||(41662400-41662457)
chr8 (32-88)||(43245871-43245928)
chr8 (33-81)||(7127660-7127708)
chr8 (35-90)||(9823361-9823417)
chr8 (32-88)||(34313765-34313820)
chr8 (32-88)||(43162234-43162290)
chr8 (35-86)||(74688-74739)
chr8 (32-86)||(765736-765791)
chr8 (32-91)||(23123514-23123572)
chr8 (32-90)||(41662105-41662164)
chr8 (35-88)||(37752084-37752138)
chr8 (35-88)||(39724048-39724102)
chr8 (37-89)||(13026634-13026687)
chr8 (32-88)||(15156182-15156239)
chr8 (32-84)||(43162536-43162588)
chr8 (35-85)||(13027281-13027332)
chr8 (51-89)||(767722-767760)
chr8 (35-88)||(22851390-22851444)
chr8 (36-88)||(3463946-3463999)
chr8 (32-67)||(74981-75016)
chr8 (39-90)||(6092775-6092825)
chr8 (36-90)||(7127923-7127978)
chr8 (35-89)||(34498555-34498610)
chr8 (37-91)||(41662518-41662573)
chr8 (35-89)||(3463641-3463694)
chr8 (35-83)||(7127827-7127877)
chr8 (58-92)||(9465603-9465637)
chr8 (35-88)||(9822748-9822802)
chr8 (38-88)||(11007563-11007613)
chr8 (35-88)||(23123338-23123392)
chr8 (39-89)||(33747983-33748033)
chr8 (32-86)||(37670253-37670306)
chr8 (36-70)||(43598756-43598790)
chr8 (32-69)||(9465871-9465908)
chr8 (32-83)||(18019915-18019968)
chr8 (37-85)||(22786843-22786892)
chr8 (35-91)||(24473768-24473825)
chr8 (33-81)||(9930837-9930885)
chr8 (35-86)||(25438794-25438846)
[»] chr7 (51 HSPs)
chr7 (32-92)||(9412019-9412080)
chr7 (1-88)||(3687622-3687710)
chr7 (32-87)||(8953886-8953941)
chr7 (32-89)||(9412322-9412380)
chr7 (36-89)||(6908212-6908265)
chr7 (32-88)||(13772898-13772955)
chr7 (36-88)||(23686421-23686473)
chr7 (36-88)||(35079960-35080012)
chr7 (35-90)||(44600135-44600191)
chr7 (32-88)||(3687353-3687411)
chr7 (35-89)||(13772640-13772695)
chr7 (35-88)||(44599489-44599543)
chr7 (36-85)||(6908485-6908534)
chr7 (41-89)||(23686723-23686772)
chr7 (35-91)||(13744233-13744289)
chr7 (35-89)||(13863312-13863367)
chr7 (41-88)||(27096047-27096094)
chr7 (41-88)||(27182209-27182256)
chr7 (35-88)||(5349733-5349784)
chr7 (38-87)||(5735253-5735303)
chr7 (32-86)||(33628397-33628451)
chr7 (35-92)||(18925322-18925378)
chr7 (32-85)||(27096339-27096392)
chr7 (32-85)||(27181911-27181964)
chr7 (35-88)||(48359320-48359373)
chr7 (43-90)||(13863964-13864012)
chr7 (37-89)||(18864404-18864456)
chr7 (37-88)||(18925062-18925114)
chr7 (35-99)||(36527373-36527437)
chr7 (35-90)||(37972396-37972452)
chr7 (35-89)||(8643766-8643821)
chr7 (35-89)||(10533033-10533088)
chr7 (32-86)||(29291808-29291863)
chr7 (35-89)||(33628660-33628715)
chr7 (35-89)||(37889259-37889314)
chr7 (34-85)||(42419028-42419079)
chr7 (35-88)||(9035293-9035347)
chr7 (35-96)||(15566984-15567046)
chr7 (35-92)||(20419324-20419382)
chr7 (35-85)||(22740591-22740641)
chr7 (35-88)||(37888833-37888887)
chr7 (35-88)||(3204669-3204721)
chr7 (32-88)||(29292038-29292095)
chr7 (39-99)||(29292911-29292972)
chr7 (34-67)||(34235977-34236010)
chr7 (32-84)||(38191387-38191440)
chr7 (35-90)||(3205093-3205149)
chr7 (34-89)||(9034866-9034922)
chr7 (35-90)||(17156965-17157021)
chr7 (35-90)||(22740154-22740210)
chr7 (35-75)||(35080223-35080263)
[»] scaffold0376 (2 HSPs)
scaffold0376 (32-88)||(7597-7653)
scaffold0376 (35-90)||(7453-7508)
[»] scaffold0015 (2 HSPs)
scaffold0015 (32-88)||(17153-17209)
scaffold0015 (32-99)||(16842-16908)
[»] scaffold0802 (2 HSPs)
scaffold0802 (32-88)||(1118-1175)
scaffold0802 (32-88)||(1417-1474)
[»] scaffold0002 (1 HSPs)
scaffold0002 (32-88)||(411923-411979)
[»] scaffold0069 (1 HSPs)
scaffold0069 (34-88)||(50506-50560)
[»] scaffold1221 (2 HSPs)
scaffold1221 (32-85)||(1781-1834)
scaffold1221 (35-88)||(1511-1564)
[»] scaffold0328 (2 HSPs)
scaffold0328 (35-94)||(6795-6855)
scaffold0328 (35-88)||(6152-6206)
[»] scaffold0535 (1 HSPs)
scaffold0535 (39-91)||(10009-10062)
[»] scaffold0460 (1 HSPs)
scaffold0460 (35-88)||(763-816)
[»] scaffold0176 (1 HSPs)
scaffold0176 (35-96)||(19613-19674)
[»] scaffold0041 (1 HSPs)
scaffold0041 (35-90)||(38695-38751)
[»] scaffold0598 (1 HSPs)
scaffold0598 (36-87)||(6877-6927)
[»] scaffold0017 (1 HSPs)
scaffold0017 (35-88)||(185274-185328)
[»] scaffold0029 (1 HSPs)
scaffold0029 (34-90)||(9903-9960)
[»] scaffold0035 (1 HSPs)
scaffold0035 (32-87)||(72967-73023)


Alignment Details
Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 103 - 280
Target Start/End: Complemental strand, 13246446 - 13246269
Alignment:
Q  103 agggtatataaaatgtttatatagaacgatagtgtgtcatattccaaccctaatattccaaaaaaccaaaaccttaacaatggcggtgatgacccggagg 202  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  13246446 aggggatataaaatgtttatatagaaccatagtgtgtcaaattccaaccctaatattccaagaaaccgaaaccttaacaatggcggtgatgacccggagg 13246347  T
Q  203 caacgacgcatgatggcgggagcgacggcggagtcaccgttcacggtactcccaaaggaactgatgattgacatcctt 280  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246346 caacgacgcatgatggcgggagcgacggcagagtcaccgttcacggtactcccaaaggaactgatgattgacatcctt 13246269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 21032035 - 21031976
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  21032035 gagggggtgcaaaatcgcacaattagcaaaagttagggggaaaagtgcaattaagccttt 21031976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 10039729 - 10039675
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 10039675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 3403986 - 3404044
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  3403986 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 3404044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 3825583 - 3825530
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  3825583 gagggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 13579648 - 13579705
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  13579648 gagggggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagcct 13579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 18241911 - 18241850
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcctttt 92  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  18241911 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctttt 18241850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30388149 - 30388062
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||||| |||||        ||| || ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  30388149 aaagatggggtgcaaaatcgctcaaaaaaaagagaggctgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 3403771 - 3403717
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 11656779 - 11656836
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagg-gggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  11656779 gagggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 33655114 - 33655170
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||| || |||||||||||||||| ||||| |||||||||||||||||    
T  33655114 gggggtgcaaaattgcacaattagcaaaagataaggggacaagtgcaattaagcctt 33655170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 31598732 - 31598783
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  31598732 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaaacctt 31598783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 33829636 - 33829691
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  33829636 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 33829691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 30388360 - 30388402
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagatagggggaaaa 75  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  30388360 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaa 30388402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 31598274 - 31598328
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    |||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagatagagggaaaaatacaattaagcctt 31598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 33829044 - 33828990
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  33829044 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 23250648 - 23250587
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttta 93  Q
    |||||||||||| ||| | |||||  ||||||||||||| ||||||||||||||||||||||    
T  23250648 gagggggtgcaagatctcacaattgacaaaagataggggaaaaagtgcaattaagcctttta 23250587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 33972050 - 33971994
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||  |||||| ||||||||||||| |||| ||||||||||||    
T  33972050 gagggggtgcaaaatcgtacaattaacaaaagataggggaaaaactgcaattaagcc 33971994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 21032285 - 21032335
Alignment:
Q  40 gcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  21032285 gcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 2762664 - 2762611
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagc-aaaagataggggg-aaaagtgcaatt 83  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  2762664 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 10039840 - 10039893
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagc-aaaagataggggg-aaaagtgcaatt 83  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  10039840 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 23250889 - 23250946
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||| |||| |||| |||||||||||||||||||  ||||||||||| ||||||    
T  23250889 gagggggtacaaattcgcacaattagcaaaagatagggcaaaaagtgcaatcaagcct 23250946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 29074372 - 29074429
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| ||||| |||||  |||||||| |||| |||||||||||||||    
T  29074372 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctttt 29074429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 29079136 - 29079193
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| ||||| |||||  |||||||| |||| |||||||||||||||    
T  29079136 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctttt 29079193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 29106945 - 29107002
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| ||||| |||||  |||||||| |||| |||||||||||||||    
T  29106945 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctttt 29107002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 12714488 - 12714436
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaatt 83  Q
    |||||| ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  12714488 gaggggctgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 18242153 - 18242190
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggg 69  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  18242153 gagggggtgcaaaatcgcacaattggcaaaagataggg 18242190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 22684358 - 22684411
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||| | ||||| |||||  ||| |||||||||||||||||||||    
T  22684358 ggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagcc 22684411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 22754710 - 22754657
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||| | ||||| |||||  ||| |||||||||||||||||||||    
T  22754710 ggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagcc 22754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 7654548 - 7654604
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| |||||  ||||  ||||||| ||||||||||||||||||||    
T  7654548 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 7654604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 11656660 - 11656608
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaa-gataggggg-aaaagtgcaatt 83  Q
    ||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||    
T  11656660 agggggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaatt 11656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 47871121 - 47871180
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttta 93  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47871121 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcctttta 47871180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 10293906 - 10293963
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  10293906 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 18875188 - 18875245
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  18875188 gagggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 17372354 - 17372298
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagatagggggaaaa-gtgcaattaagcc 88  Q
    ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  17372354 agggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 20968775 - 20968715
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagccttt 91  Q
    |||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||    
T  20968775 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaagccttt 20968715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 14015964 - 14016014
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  14015964 ggggtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaa 14016014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 18874935 - 18874881
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcct 89  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcct 18874881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 20969019 - 20969073
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 45060872 - 45060926
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcct 45060926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 9027033 - 9027086
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||| ||||| || |||||||||||||||||||||||||||| |||||||||    
T  9027033 ggggtgtaaaattgcacaattagcaaaagatagggggaaaagtgaaattaagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 42627550 - 42627599
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  42627550 tgcaaaatcacacaattagcaaaagatagagggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 42673031 - 42672978
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||||||||||||||||||||||    
T  42673031 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 40848574 - 40848519
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    |||||| |||||||| ||||| |||||  |||||||||||||||||||||||||||    
T  40848574 ggggtgtaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctt 40848519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 47870877 - 47870822
Alignment:
Q  35 ggggtgcaaaat-cgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||| |||  ||||||||||||||||||| ||||||||||||||||||    
T  47870877 ggggtgcaaaattcgcataattagcaaaagataggggaaaaagtgcaattaagcct 47870822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 3353181 - 3353128
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||  ||||  |||||||||||||||||||||||||    
T  3353181 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 8315083 - 8315136
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||||| |||||  ||||| |||||||| |||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatataggggggaaagtgcaattaagcct 8315136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 24485460 - 24485513
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||| ||||||||||||||||||    
T  24485460 ggggtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaagcc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 42673296 - 42673349
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||  ||||  |||||||||||||||||||||||||    
T  42673296 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 17372594 - 17372645
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    ||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||    
T  17372594 ggggtgcaaaatcgcacaattagtaaaatata-ggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 45060644 - 45060596
Alignment:
Q  41 caaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcc 88  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||    
T  45060644 caaaatcgcataattagcaaaagatagtggggaaaagtgcaattaagcc 45060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 26540876 - 26540915
Alignment:
Q  42 aaaatcgcgcaattagcaaaagatagggggaaaagtgcaa 81  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  26540876 aaaatcgcacaattagcaaaagatagggggaaaggtgcaa 26540915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 40848961 - 40849016
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  |||| ||||||||||||||||||||||    
T  40848961 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcct 40849016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 48159951 - 48159896
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||||||||||||||    
T  48159951 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 48159896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 1101087 - 1101141
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaa-gatagggggaaaagtgcaattaa 85  Q
    |||||||||||||||||| |||||  ||||| |||||||| ||||||||||||||    
T  1101087 gagggggtgcaaaatcgcacaattgacaaaaagataggggcaaaagtgcaattaa 1101141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 1101182 - 1101236
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    ||||| |||||||| |||  ||||||||||| |||||||||||||||||||||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagcct 1101236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 1928434 - 1928484
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    ||||||||||||||| ||||| ||||||||||||| | ||| |||||||||    
T  1928434 ggggtgcaaaatcgcacaattggcaaaagatagggaggaaaatgcaattaa 1928484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 3644783 - 3644837
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||| ||||| || |||||||||| ||||||||||||    
T  3644783 ggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 9026789 - 9026739
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||||||||| || |||||| ||||||||||| |||||| |||||||||    
T  9026789 ggggtgcaaaattgcacaattaacaaaagataggaggaaaaatgcaattaa 9026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 1927825 - 1927772
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||  |||| ||||||||||| ||||||| |||||||||||||    
T  1927825 gggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 4947312 - 4947263
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaatta 84  Q
    |||||||||||||| |||||| ||||| ||||||| ||||||||||||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 8314066 - 8314013
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    |||||||||||||| |||||  ||||| ||||||| ||||||||||||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 10293665 - 10293608
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||  |||||||||||||  |||| ||||||||||||    
T  10293665 gagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaagcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 17441066 - 17441119
Alignment:
Q  38 gtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcctt 90  Q
    |||||||||||| |||||| |||||||||| | |||||| ||||||||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaagcctt 17441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 21896511 - 21896564
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||  ||||| ||||||| |||| ||||||||||||    
T  21896511 ggggtgcaaaatcgcacaattgacaaaatataggggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 26540747 - 26540694
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    ||||||||||||||| || |||||  ||||| ||||||| ||||||||||||||    
T  26540747 gagggggtgcaaaattgcacaattgacaaaaaataggggcaaaagtgcaattaa 26540694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 3353553 - 3353597
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaa 81  Q
    ||||||||||||| ||||| |||||  ||||||||||||||||||    
T  3353553 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaa 3353597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  37 ggtgcaaaatcgcgcaattagc-aaaagataggggg-aaaagtgcaatt 83  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 22429211 - 22429159
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagc 87  Q
    ||||||||| |||| ||||| |||||| ||||||| |||||||||||||||||    
T  22429211 gggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 26007235 - 26007179
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||||| |||||  ||||  |||||||| ||| |||||||||||||||    
T  26007235 ggggtgcaaaatcgcacaattgacaaactataggggggaaaatgcaattaagccttt 26007179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 53687942 - 53687886
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctt 90  Q
    ||||||||||||||| |||||  ||||  |||||||| |||||||||||||||||||    
T  53687942 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 53687886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 53766580 - 53766636
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttt 91  Q
    ||||||||||| || ||||| |||||  ||||||| |||||||||||||||||||||    
T  53766580 gggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagccttt 53766636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 13589656 - 13589715
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13589656 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccttt 13589715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 17518599 - 17518653
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaag 86  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  17518599 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 22149489 - 22149400
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||||||| |||||        |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  22149489 aaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattaccaaa-gatagggggaaaagtgcaattaagccttt 22149400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 41083208 - 41083265
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  41083208 gagggggtgcaaaatcgcacaactaacaaaagatagggggaaaagtgcaattaagcct 41083265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 47955363 - 47955304
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcctt 90  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  47955363 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 47955304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 8108993 - 8109051
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctttt 8109051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 17518359 - 17518302
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||    
T  17518359 gagggggtgcaaaatcgcacaattaacaaaagataaggggaaaggtgcaattaagcct 17518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 49284463 - 49284406
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttt 91  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  49284463 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccttt 49284406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 22149701 - 22149756
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaaaccttt 22149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 20371352 - 20371406
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||| ||||| |||||  |||||||||||||||||||||||||    
T  20371352 gggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 31848189 - 31848247
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    |||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||    
T  31848189 gagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagcct 31848247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 47955605 - 47955663
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||    
T  47955605 gagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcct 47955663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 48190825 - 48190771
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 48191355 - 48191425
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttttatatttttagag 104  Q
    ||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||| || | |||||||||    
T  48191355 ggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcctattttttttttagag 48191425  T

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Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 1176766 - 1176717
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 8108777 - 8108724
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaa 85  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  8108777 agggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaa 8108724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 27172169 - 27172116
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||||||||||||||||||||||    
T  27172169 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 20480613 - 20480665
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||| ||||| |||||  |||||||||||||||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 20480221 - 20480166
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| |||||  ||||  |||||||||||||||||||||||||||    
T  20480221 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcctt 20480166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 39692000 - 39692058
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| |||||  ||||| ||||||| ||||||||||||||||||||||    
T  39692000 ggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcctttt 39692058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 46056953 - 46056904
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  46056953 ggtgcaaaatcgcaaaattagcaaaagataggggg-aaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 1177016 - 1177069
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaa 85  Q
    |||||||||||||| || |||||||| |||||||||| ||||||||||||||||    
T  1177016 agggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaa 1177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 41082966 - 41082909
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    |||||| ||||||||||| ||||| ||||||||||||||| |||||| ||||||||||    
T  41082966 gaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaagcc 41082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 50615621 - 50615674
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||  ||||  |||||||||||||||||||||||||    
T  50615621 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 50623449 - 50623502
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||  ||||  |||||||||||||||||||||||||    
T  50623449 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 19007783 - 19007731
Alignment:
Q  40 gcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    |||||||||| ||||| |||||  |||||||| ||||||||||||||||||||    
T  19007783 gcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcctttt 19007731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 32163043 - 32163098
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||||||||||||    
T  32163043 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 32163098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 44911079 - 44911024
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||| ||| ||||| |||||||||||||||||    
T  44911079 ggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcct 44911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 50429708 - 50429645
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagccttttatatttt 99  Q
    ||||||||||||| |||||||||||  |||  |||||||||| |||||||||||||||| ||||    
T  50429708 ggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagccttttatgtttt 50429645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 999529 - 999579
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||||| ||||| ||||   ||||||||||||||||||||||||||    
T  999529 tgcaaaatcgcacaattggcaatctatagggggaaaagtgcaattaagcct 999579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 1176893 - 1176839
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaa 85  Q
    ||||||||||||||| || |||||  |||||||||||||| ||||||||||||||    
T  1176893 gagggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 6002291 - 6002237
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||| | |||||  ||||||||||||| ||||||||||||||||||    
T  6002291 ggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 9347180 - 9347126
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||||||||||||    
T  9347180 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 9347551 - 9347605
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||| || ||||| |||||  |||||||| |||||||||||||||||    
T  9347551 ggggtgcaaaattgcacaattggcaaactataggggggaaagtgcaattaagcct 9347605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 48105116 - 48105170
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||    
T  48105116 ggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 31847945 - 31847892
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagccttt 91  Q
    |||||||| || ||||||||||||||| |||||| ||||||||||||| |||||    
T  31847945 tgcaaaattgcacaattagcaaaagataagggggtaaagtgcaattaaaccttt 31847892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 46057210 - 46057243
Alignment:
Q  52 aattagcaaaagatagggggaaaagtgcaattaa 85  Q
    ||||||||||||||||||| ||||||||||||||    
T  46057210 aattagcaaaagataggggaaaaagtgcaattaa 46057243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 47498495 - 47498552
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||| ||| |||||  ||||  |||||||||||||||||||||||| ||||    
T  47498495 ggggtgcaaaaccgcacaattgacaaactatagggggaaaagtgcaattaagcttttt 47498552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 49317801 - 49317752
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||| || ||||| |||||  |||||||||||||||||||||||||    
T  49317801 tgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 49318170 - 49318219
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||| ||||| |||||  |||||||| ||||||||||||||||    
T  49318170 tgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 49318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 4692433 - 4692489
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctt 90  Q
    |||||||||||| || ||||| |||||  |||||||| |||||||||||||||||||    
T  4692433 ggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcctt 4692489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 13918869 - 13918925
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||| ||||| |||||  |||||| |||||||||||||||||| ||||    
T  13918869 ggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcttttt 13918925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 48313792 - 48313848
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcctt 90  Q
    |||||||||||| || ||||||||||||||| | ||| |||||| ||||||||||||    
T  48313792 ggggtgcaaaattgcacaattagcaaaagataatgggaaaaagtacaattaagcctt 48313848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 50526472 - 50526524
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaag 86  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  50526472 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 3930477 - 3930534
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3930477 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 3930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35393742 - 35393833
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||||| |||||        ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  35393742 aaagatggggtgcaaaatcgctcataaaaaagagggggtgcaaattcgcacaattagcaaaagatagggtgaaaagtgcaattaagcctttt 35393833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 13198903 - 13198964
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcctttt 92  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  13198903 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctttt 13198964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 18077199 - 18077258
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  18077199 gagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcctt 18077258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8488448 - 8488534
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    ||||||||||||||||| |||||        |||||||||||||||||| ||||||| |||||||| || |||||||||||||||||    
T  8488448 aaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattagaaaaagataaggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 16555572 - 16555514
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  16555572 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcct 16555514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 16555817 - 16555871
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  16555817 ggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 22681631 - 22681576
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    |||||||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  22681631 gagggggtgcaaaatcgcacaattgacaaaagataggggggaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 50678833 - 50678778
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  50678833 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 50678778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 56505747 - 56505692
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  56505747 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 56505692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 11241661 - 11241715
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||    
T  11241661 ggggtgcaaaatcccacaattggcaaaagatagggggaaaagtacaattaagcct 11241715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 24775783 - 24775841
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagg-gggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||||||||||||||||    
T  24775783 ggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcctttt 24775841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 36095871 - 36095813
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||    
T  36095871 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctttt 36095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 49178813 - 49178866
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaatta 84  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  49178813 gagggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 3930235 - 3930179
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||||||  |||||  |||||||||||| |||||||||||||||||    
T  3930235 gagggggtgcaaaatcgcataattaataaaagataggggaaaaagtgcaattaagcc 3930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 27304773 - 27304718
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||    
T  27304773 gagggggtgcaaaatcgcacaattagcagaagata-ggggaaaagggcaattaagcc 27304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 5206042 - 5205987
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcct 89  Q
    |||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||    
T  5206042 ggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagcct 5205987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 22681881 - 22681948
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagg-gggaaaagtgcaattaagccttttatatttttaga 103  Q
    |||||||||| || |||||| ||||||||||| ||||||||||||||||||||| ||  |||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcctatttaatttttaga 22681948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 26207414 - 26207359
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||||||||||||||    
T  26207414 ggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcctt 26207359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 36096475 - 36096526
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaa 85  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  36096475 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 169068 - 169007
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggga--aaagtgcaattaagccttttat 94  Q
    ||||||||||||||| ||||| |||||  |||||||||  ||||||||||||||||||||||    
T  169068 ggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagccttttat 169007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 8182171 - 8182229
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagc-aaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||||    
T  8182171 gggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaagcctt 8182229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 50679424 - 50679478
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||  ||||| |||||||||||||| ||||||||||||||||||    
T  50679424 ggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 8182049 - 8181992
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaa-gataggggg-aaaagtgcaattaagc 87  Q
    |||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||    
T  8182049 gagggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 11241446 - 11241389
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcc 88  Q
    |||||| ||||||||||| |||||| |||||||| ||| |||||||||||||||||||    
T  11241446 gaggggatgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 27304890 - 27304943
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagc-aaaagataggggg-aaaagtgcaatt 83  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  27304890 gagggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 293217 - 293277
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaa-gtgcaattaagccttttat 94  Q
    ||||||||||||||| |||||  ||||  |||||||||||| |||||||||||||||||||    
T  293217 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagccttttat 293277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 28196773 - 28196829
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||  ||||||| ||||||||||||||||||||    
T  28196773 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctt 28196829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 43051252 - 43051308
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||||||    
T  43051252 ggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcctt 43051308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 7603200 - 7603146
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    ||||||||||||||| || ||||||  |||||||| ||||||||||||||||||||    
T  7603200 gagggggtgcaaaattgcacaattaaaaaaagata-ggggaaaagtgcaattaagc 7603146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 9023298 - 9023243
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||||||||||||    
T  9023298 ggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcct 9023243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 28196400 - 28196345
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||||||||||||||    
T  28196400 ggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 28196345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 48406015 - 48405960
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    |||||||||||| ||  |||| |||||  |||||||||||||||||||||||||||    
T  48406015 ggggtgcaaaattgcataattggcaaactatagggggaaaagtgcaattaagcctt 48405960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 54509116 - 54509155
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaa 75  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  54509116 gggtgcaaaatcgcacaattagcaaaaaatagggggaaaa 54509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 4239366 - 4239420
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||||||||||||    
T  4239366 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 7603422 - 7603472
Alignment:
Q  38 gtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||| |||||   |||||||||||| |||||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagataggggaaaaagtgcaattaagcc 7603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 13198660 - 13198606
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaa 85  Q
    |||||||||||||||||| ||||| ||||||||| | || |||||||||||||||    
T  13198660 gagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 23539893 - 23539840
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||||||||||||    
T  23539893 ggggtgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaagcct 23539840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 32703279 - 32703221
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctttt 92  Q
    |||||||| |||||| ||||| |||||  |||||||| |||||||||||||||||||||    
T  32703279 ggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcctttt 32703221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 32703650 - 32703704
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  ||||||| ||||||||||||||||||    
T  32703650 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 5206132 - 5206185
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagc-aaaagatagggggaa-aagtgcaatt 83  Q
    ||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  5206132 gagggagtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaatt 5206185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 5206231 - 5206283
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||||||||| ||||||  |||||||| ||||||||||||||||||||||    
T  5206231 gggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcc 5206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 11529222 - 11529169
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagc 87  Q
    ||||||||||||| | ||||| ||||||| ||||| ||||||||||||||||||    
T  11529222 ggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 25161932 - 25161879
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagc 87  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||||||||||||    
T  25161932 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 26207746 - 26207803
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||||| ||||| |||||  ||| ||||||||| |||||||||||||||    
T  26207746 ggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagccttt 26207803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 39415277 - 39415244
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagataggg 69  Q
    |||||||||||||| |||||||||||||||||||    
T  39415277 gggtgcaaaatcgcacaattagcaaaagataggg 39415244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 47219203 - 47219252
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaa 85  Q
    ||||||||||||| ||||||||||||||||| || ||||| |||||||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaa 47219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 9023680 - 9023736
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| |||||  ||||  ||||||| ||||||||||||||||||||    
T  9023680 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 9023736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 9380744 - 9380796
Alignment:
Q  38 gtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    |||||||||||| ||||| |||||  ||||||| |||||||||||||||||||    
T  9380744 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 9380796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  37 ggtgcaaaatcgcgcaattagc-aaaagat-agggggaaaagtgcaatt 83  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 39415528 - 39415580
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcctt 90  Q
    |||||||| || ||||||||||||||||| ||| ||||||||| |||||||||    
T  39415528 tgcaaaattgcacaattagcaaaagatagagggaaaaagtgcagttaagcctt 39415580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 43050661 - 43050605
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| | |||||||||||  ||||||||||||||| ||||    
T  43050661 ggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaaacctt 43050605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 45829047 - 45828983
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttttatatttt 99  Q
    |||| ||||||||| ||||| | |||||||||| | ||||||| |||||||||||||||| ||||    
T  45829047 gggtacaaaatcgcacaattggtaaaagataggagtgaaaagtacaattaagccttttatttttt 45828983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 54508868 - 54508812
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaa-gtgcaattaagccttt 91  Q
    |||||||||||| | ||||| ||||||||| || |||||| ||||||||||||||||    
T  54508868 gggtgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaattaagccttt 54508812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 6694 - 6750
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6694 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 6451 - 6392
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcctt 90  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  6451 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 6392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 11883680 - 11883612
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagccttttatatttt 99  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  11883680 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccttttatttttt 11883612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 11883923 - 11883980
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  11883923 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 40469726 - 40469787
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctttt 92  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  40469726 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaaacctttt 40469787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 20347461 - 20347521
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagccttt 91  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  20347461 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccttt 20347521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 24832385 - 24832329
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  24832385 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 24832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 26737537 - 26737478
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  26737537 gagggggtgcaaaatcgcacaattagcaaaagata-ggagaaaagtgcaattaagcctttt 26737478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 6171207 - 6171156
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 18055103 - 18055050
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaag 86  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18055103 gagggggtgcaaaatcgcacaattagcaaaag-tagggggaaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 30190980 - 30190922
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  30190980 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 30190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 32673141 - 32673199
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||    
T  32673141 agggggtgcaaaatcgcacaattggcaaaagataggggaaaaagtgcaattaaaccttt 32673199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 18296693 - 18296749
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 18296749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 2639482 - 2639537
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  2639482 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 2639537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 26841641 - 26841586
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  26841641 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 26841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 40221364 - 40221313
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagatagggggaaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43495571 - 43495658
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||||| |||||        |||||| ||||||||||| |||||||||||| ||||| || ||||||||||||||||    
T  43495571 aaagatggggtgcaaaatcgctcaaaaaaaagaggggatgcaaaatcgcacaattagcaaaatataggtgggaaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 2638874 - 2638812
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttttatat 96  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||| ||||    
T  2638874 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctttgatat 2638812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 26737781 - 26737835
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||||||    
T  26737781 ggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 17346032 - 17346089
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||| ||||||||||||| ||||||||||||||||  || ||||||||||||||||||    
T  17346032 gaggaggtgcaaaatcgcacaattagcaaaagataaaggaaaaagtgcaattaagcct 17346089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 30191222 - 30191279
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||    
T  30191222 gagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcc 30191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 40469484 - 40469427
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagg-gggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||    
T  40469484 gagggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 43495366 - 43495305
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagg-gggaaaagtgcaattaagcctttt 92  Q
    |||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  43495366 gaggggatgaaaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaagcctttt 43495305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 6171456 - 6171512
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcctt 6171512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 6495723 - 6495779
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||| |||||  |||||||||||| |||||||||||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcctttt 6495779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 7980003 - 7980058
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| |||||||||||  |||| || |||||||||||||||||||    
T  7980003 ggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaagcctt 7980058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 20347217 - 20347162
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcct 20347162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 15920835 - 15920781
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagg-gggaaaagtgcaattaa 85  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  15920835 gagggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaa 15920781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 26842238 - 26842292
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||    
T  26842238 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 43495481 - 43495535
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaa-gatagggggaaaagtgcaattaa 85  Q
    |||||||||||||||||| |||||  ||||| |||||||||||||||||||||||    
T  43495481 gagggggtgcaaaatcgcacaattgacaaaaagatagggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 17345788 - 17345736
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    ||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||    
T  17345788 gagggggtgcaaaattgcataattagcaaaagata-ggggaaaagtgcaattaa 17345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 18296130 - 18296077
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagc 87  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||    
T  18296130 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 6325349 - 6325413
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagccttttatattttt 100  Q
    ||||||||||||| ||||| |||||  ||| |||||||||||||||||||| ||||||| |||||    
T  6325349 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagtcttttattttttt 6325413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 37720258 - 37720202
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||||||||||||||    
T  37720258 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctt 37720202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 5378715 - 5378660
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||||||||||||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 5378660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 7591255 - 7591204
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaa 85  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||| |||||||    
T  7591255 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 41790912 - 41790967
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    |||| |||||||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  41790912 ggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcct 41790967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 17851032 - 17850978
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||||||||||||    
T  17851032 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 7309217 - 7309116
Alignment:
Q  179 acaatggcggtgatgacccggaggcaacgacgcatgatggcgggagcgacggcggagtcaccgttcacggtactcccaaaggaactgatgattgacatcc 278  Q
    |||||||||||| | || ||||| ||||| ||||||||||  | ||| |||||||||||||||  | | ||||||||  ||||  |||||||||| ||||    
T  7309217 acaatggcggtggttacgcggagccaacggcgcatgatggaagaagcaacggcggagtcaccgagctccgtactcccggaggatttgatgattgaaatcc 7309118  T
Q  279 tt 280  Q
    ||    
T  7309117 tt 7309116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 8851582 - 8851639
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttt 91  Q
    ||||||||||||||| |||||  ||||  ||||||| |||||||||||||||||||||    
T  8851582 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccttt 8851639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 15321446 - 15321394
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaag 86  Q
    ||||| |||||||| || |||||| ||||||||| |||||||||||||||||||    
T  15321446 aggggatgcaaaattgcacaattaacaaaagata-ggggaaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  36 gggtgcaaaatcgcgcaattagc-aaaagataggggg-aaaagtgcaatt 83  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 6495519 - 6495468
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagc 87  Q
    |||||||||||||| |||||| |||| ||||||| ||||||||||||||||||    
T  6495519 gggtgcaaaatcgcacaattaacaaa-gatagggaggaaaagtgcaattaagc 6495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 8851202 - 8851146
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||  ||| ||||||||||||||||||| ||||    
T  8851202 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacctt 8851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 16911269 - 16911321
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    ||||||||||||||| ||||| |||||  |||||||  |||||||||||||||    
T  16911269 ggggtgcaaaatcgcacaattggcaaactataggggcgaaagtgcaattaagc 16911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 18750126 - 18750178
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    ||||||||||||||| |||||  ||||  ||||||||| ||||||||||||||    
T  18750126 ggggtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaa-gat-agggggaaaagtgcaatt 83  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 45804 - 45861
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  45804 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaagcct 45861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 45593 - 45535
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  45593 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 45535  T

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Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18433282 - 18433375
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcctttta 93  Q
    ||||||||||||||||| |||||        |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  18433282 aaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctttta 18433375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 22428987 - 22428933
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  22428987 ggggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagcct 22428933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 22429196 - 22429250
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  22429196 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagcct 22429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 26020504 - 26020448
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  26020504 ggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcctt 26020448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 41383167 - 41383223
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaatagggggaaaagttcaattaagccttt 41383223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34577130 - 34577217
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||||| |||||        || ||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  34577130 aaagatggggtgcaaaatcgctcaaaaaaaagatggggtgcaaaatcacacaattagcaaaagataggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 18433069 - 18433015
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  18433069 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 25175148 - 25175206
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  25175148 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 25175206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 23011131 - 23011079
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 25116060 - 25116116
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  25116060 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 25116116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34576954 - 34576870
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    ||||||||||||||||| |||||        || |||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  34576954 aaagatggggtgcaaaatcgctcaaaaaaaagatggggtgtaaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 18817611 - 18817665
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  18817611 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 25115813 - 25115756
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||    
T  25115813 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcct 25115756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 25174905 - 25174848
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||    
T  25174905 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcct 25174848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 9665828 - 9665879
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||| || |||||||||||||||||||||||||||| |||||||||    
T  9665828 gggtgcaaaat-gcacaattagcaaaagatagggggaaaagtggaattaagcc 9665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 22729440 - 22729492
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    ||||||||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  22729440 ggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 31569958 - 31569910
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 37610255 - 37610199
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||| | ||||| |||||  ||||||||||||||||||||||||||||    
T  37610255 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagccttt 37610199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 37780373 - 37780317
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||| | ||||| |||||  ||||||||||||||||||||||||||||    
T  37780373 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagccttt 37780317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 16466746 - 16466797
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcct 16466797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 18817006 - 18816951
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||    
T  18817006 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 18816951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 9665609 - 9665560
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  9665609 ggggtgcaaaattgcacaattagcaaaagata-ggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 5187828 - 5187885
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcct 89  Q
    |||||||||||||| || |||||| |||||||| ||||| ||||||||||||||||||    
T  5187828 agggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcct 5187885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 12441320 - 12441364
Alignment:
Q  43 aaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagata-ggggaaaagtgcaattaagcc 12441364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 23011383 - 23011432
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||||||||||| |||||| ||||||||| ||| ||||||||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagataagggaaaaagtgcaattaa 23011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 41382945 - 41382896
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||||||||||| |||||| |||||||||||||| ||| |||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaatgcaattaa 41382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 43463809 - 43463752
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| ||||| |||||  ||| |||||||||||||||||| ||||||    
T  43463809 ggggtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaaacctttt 43463752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 43464194 - 43464246
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||||||| |||||  ||||  ||||||||||||||||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 43464246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 11351427 - 11351478
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagg-gggaaaagtgcaattaa 85  Q
    ||||||||||||||| ||||| |||||||||||| | |||||||||||||||    
T  11351427 ggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaa 11351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 12498621 - 12498566
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||||||||||||||    
T  12498621 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 12498566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 12498928 - 12498983
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||||||||||||    
T  12498928 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 12498983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 16726135 - 16726084
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaat 82  Q
    |||| ||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  16726135 gaggaggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 19514963 - 19515022
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctttta 93  Q
    ||||||||||||||| |||||  ||||  ||||||| |||||||||||||||||||||||    
T  19514963 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctttta 19515022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 26571164 - 26571219
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||||||||||||    
T  26571164 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 26571219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 34147512 - 34147571
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaa-gtgcaattaagccttttata 95  Q
    ||||||||||||| |||||  ||||  |||||||||||| ||||||||||||||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagccttttata 34147571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 37610620 - 37610671
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||| |||||||||||  |||||||| ||||| ||||||||||    
T  37610620 ggtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaagcc 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 5187605 - 5187547
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaa-agtgcaattaagcctttt 92  Q
    ||||||||||||||| | |||||||||| ||||||| ||| ||| ||||||||||||||    
T  5187605 ggggtgcaaaatcgcacgattagcaaaaaataggggaaaagagtacaattaagcctttt 5187547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 22729058 - 22729008
Alignment:
Q  38 gtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||| |||||  ||||  |||||||||||||||||||||||||    
T  22729058 gtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 33324835 - 33324893
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    |||||||||||||||| | |||||  |||||||||||||  ||||||||||||||||||    
T  33324835 gagggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagcct 33324893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 9869611 - 9869557
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagccttt 91  Q
    |||||||||||||| |||||||||||  |||||| |||||||||||||||| |||||    
T  9869611 gggtgcaaaatcgcacaattagcaaa--atagggaggaaaagtgcaattaaaccttt 9869557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 10098941 - 10099002
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttttatat 96  Q
    ||||||||||||||| |||||  ||||  ||||| |||||||||||||||| ||| ||||||    
T  10098941 ggggtgcaaaatcgcacaattgacaaactataggaggaaaagtgcaattaaacctattatat 10099002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 11350861 - 11350805
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttt 91  Q
    |||||||||||| || ||||| |||||||||||||| ||||| |||||||||||||||    
T  11350861 ggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagccttt 11350805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 22629498 - 22629465
Alignment:
Q  58 caaaagatagggggaaaagtgcaattaagccttt 91  Q
    |||||||||||||||||||||||| |||||||||    
T  22629498 caaaagatagggggaaaagtgcaactaagccttt 22629465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 2817582 - 2817626
Alignment:
Q  42 aaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaag 86  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||    
T  2817582 aaaatcgcacaattcgcaaactatagggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 37780744 - 37780796
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    ||||||||||||| |||||||||||  ||| ||||||||||| ||||||||||    
T  37780744 ggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 25366 - 25425
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcctt 90  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  25366 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 25425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 205743 - 205684
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  205743 gagggggtgcaaaatcgcacaattagcaaaagatagggagaaaaatgcaattaagccttt 205684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 438987 - 438930
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  438987 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 439196 - 439254
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcct 89  Q
    |||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  439196 gaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagcct 439254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 183660 - 183720
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctttt 92  Q
    ||||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  183660 gagggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgcaattaagcctttt 183720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 183416 - 183367
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||||||||||  |||||  ||||||||||||||||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagatagggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 16929239 - 16929296
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  16929239 gagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 13936776 - 13936721
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  13936776 ggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcctt 13936721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 43246173 - 43246232
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcctt 90  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  43246173 gagggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcctt 43246232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 15155940 - 15155882
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  15155940 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 15155882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 16928999 - 16928941
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||    
T  16928999 gagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagcct 16928941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 12281181 - 12281120
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcctttt 92  Q
    |||| ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  12281181 gaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctttt 12281120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 12281423 - 12281480
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  12281423 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18020054 - 18020142
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||||||||||||||| |||||        |||||||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||    
T  18020054 aaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagata-gggtaaaagtgcaattaagcctt 18020142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 37752413 - 37752470
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  37752413 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 41662400 - 41662457
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  41662400 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 43245928 - 43245871
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  43245928 gagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 7127708 - 7127660
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaa 81  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7127708 aggggatgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 9823361 - 9823417
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  9823361 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 9823417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 34313820 - 34313765
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  34313820 gagggggtgcaaaatcgcacaattaacaaaagata-ggggaaaagtgcaattaagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 43162290 - 43162234
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||| ||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  43162290 gaggaggtgcaaaatcgcacaattaacaaaatatagggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 74739 - 74688
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaag 86  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  74739 ggggtgcaaaatcgcacaattagcaaaagatggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 765791 - 765736
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaag 86  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  765791 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 23123514 - 23123572
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    |||||||||||||||||| |||||||||||||||| |||| |||||||||||||| ||||    
T  23123514 gagggggtgcaaaatcgcacaattagcaaaagataagggg-aaagtgcaattaagtcttt 23123572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 41662164 - 41662105
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaa-gtgcaattaagcctt 90  Q
    |||||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||    
T  41662164 gagggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagcctt 41662105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 37752138 - 37752084
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 39724048 - 39724102
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  39724048 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 13026687 - 13026634
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13026634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 15156182 - 15156239
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  15156182 gagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 43162536 - 43162588
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaatta 84  Q
    |||||||||||||||||| | |||  |||||||||||||||||||||||||||    
T  43162536 gagggggtgcaaaatcgcacgattgacaaaagatagggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 13027281 - 13027332
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaa 85  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  13027281 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 767722 - 767760
Alignment:
Q  51 caattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  767722 caattaacaaaagatagggggaaaagtgcaattaagcct 767760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 22851444 - 22851390
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||  ||||||||||||| ||||||||||||||||||    
T  22851444 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 3463946 - 3463999
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||| ||||| |||||||||||| ||| ||||||||||||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 74981 - 75016
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag 67  Q
    |||||||||||||||||| |||||||||||||||||    
T  74981 gagggggtgcaaaatcgcacaattagcaaaagatag 75016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 6092825 - 6092775
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    ||||||||||| |||||  |||||||||||||||||| ||||||||||||||    
T  6092825 tgcaaaatcgcacaattgacaaaagatagggggaaaa-tgcaattaagcctt 6092775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 7127923 - 7127978
Alignment:
Q  36 gggtgcaaaatcgcgcaa-ttagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    |||||||||||||| ||| ||||||||||||||||  |||||||||||||| ||||    
T  7127923 gggtgcaaaatcgcacaaattagcaaaagatagggaaaaaagtgcaattaaacctt 7127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 34498555 - 34498610
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||||||||||||    
T  34498555 ggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcct 34498610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 41662573 - 41662518
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||| ||||| |||||  ||| |||||||||||||||||||||||||    
T  41662573 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagccttt 41662518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 3463694 - 3463641
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||| || |||||| |||||||||||||||||| || ||||||||||    
T  3463694 ggggtgcaaaattgcacaattaacaaaagatagggggaaaa-tgtaattaagcct 3463641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 7127827 - 7127877
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagc-aaaagataggggg-aaaagtgcaatt 83  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  7127827 ggggtgcaaaatcacgcaattagcaaaaagatagggggtaaaagtgcaatt 7127877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 9465637 - 9465603
Alignment:
Q  58 caaaagatagggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  9465637 caaaagataggaggaaaagtgcaattaagcctttt 9465603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 9822802 - 9822748
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||   |||||||||||| ||||||||||||||||||    
T  9822802 ggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 11007613 - 11007563
Alignment:
Q  38 gtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||| |||||||||||||||||  |||||| || |||||||||    
T  11007613 gtgcaaaatcgcacaattagcaaaagatagcaggaaaaatgtaattaagcc 11007563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 23123392 - 23123338
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagg-gggaaaagtgcaattaagcc 88  Q
    |||||| |||||||| |||||  ||||||||||| ||||||||||||||||||||    
T  23123392 ggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 33748033 - 33747983
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||| | |||||||||||||||| ||  ||||||||||||||||||    
T  33748033 tgcaaaatcacacaattagcaaaagatatggaaaaaagtgcaattaagcct 33747983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 37670253 - 37670306
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaag 86  Q
    ||||||||||||||| || |||||| |||| ||||||| ||||||||||||||||    
T  37670253 gagggggtgcaaaattgcacaattaacaaa-gatagggagaaaagtgcaattaag 37670306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 43598756 - 43598790
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggg 70  Q
    |||||||||||||| ||||||||||||||||||||    
T  43598756 gggtgcaaaatcgcacaattagcaaaagatagggg 43598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 9465871 - 9465908
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggg 69  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  9465871 gagggggtgcaaaatcgcacaattaacaaaagataggg 9465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 18019968 - 18019915
Alignment:
Q  32 gagggggtgcaaaatcgcgcaatta-gcaaaagataggggg-aaaagtgcaatt 83  Q
    |||||||||||||||||| |||||| | ||||||||||||| ||||||||||||    
T  18019968 gagggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 22786892 - 22786843
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaa 85  Q
    ||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaa 22786843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 24473768 - 24473825
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttt 91  Q
    ||||||||||||||| ||||| |||||  ||||||  |||||||||||||||||||||    
T  24473768 ggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagccttt 24473825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 9930837 - 9930885
Alignment:
Q  33 agggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaa 81  Q
    |||| |||||||||||| |||||| ||||||||| |||| |||||||||    
T  9930837 agggagtgcaaaatcgcacaattaacaaaagataagggggaaagtgcaa 9930885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 25438846 - 25438794
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaag 86  Q
    ||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||    
T  25438846 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 9412080 - 9412019
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagcctttt 92  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  9412080 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcctttt 9412019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3687622 - 3687710
Alignment:
Q  1 aaagatggggtgcaaaaccgctcnnnnnnnngagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||||| |||||        |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  3687622 aaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 8953886 - 8953941
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||    
T  8953886 gagggggtgcaaaattgcacaattaacaaaagatagggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 9412322 - 9412380
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcct 89  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  9412322 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 9412380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 6908265 - 6908212
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggggaaaagtgcaattaagcct 6908212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 13772898 - 13772955
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagata-gggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  13772898 gagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 23686473 - 23686421
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagatagggggaaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 35080012 - 35079960
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagatagggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 44600135 - 44600191
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  44600135 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 44600191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 3687411 - 3687353
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag--ggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||    
T  3687411 gagggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 13772695 - 13772640
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcct 89  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcct 13772640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 44599543 - 44599489
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  44599543 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 23686723 - 23686772
Alignment:
Q  41 caaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcct 89  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcct 23686772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 13744233 - 13744289
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttt 91  Q
    ||||||||||||||| |||||  ||||  ||||||||||||||||||||||||||||    
T  13744233 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccttt 13744289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 13863367 - 13863312
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||    
T  13863367 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 13863312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 27096094 - 27096047
Alignment:
Q  41 caaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  27096094 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 27096047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 27182209 - 27182256
Alignment:
Q  41 caaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  27182209 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 27182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 5349733 - 5349784
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||| |||||||||||||  ||||||||||||||||    
T  5349733 ggggtgcaaaatcgcacaattaacaaaagatagggg--aaagtgcaattaagcc 5349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 5735303 - 5735253
Alignment:
Q  38 gtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagc 87  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 33628451 - 33628397
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaag 86  Q
    |||||| |||||||| || |||||||||||||||| || ||||||||||||||||    
T  33628451 gaggggatgcaaaattgcacaattagcaaaagataaggagaaaagtgcaattaag 33628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 18925322 - 18925378
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| |||||||||||| ||| | |||||||||||||||||| ||||    
T  18925322 ggggtgcaaaatcgcacaattagcaaaatata-gaggaaaagtgcaattaagcttttt 18925378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 27096339 - 27096392
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||| ||||||||| | |||||  ||||||||||||||||||||||||||||    
T  27096339 gaggggatgcaaaatcacacaattgacaaaagatagggggaaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 27181964 - 27181911
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||| ||||||||| | |||||  ||||||||||||||||||||||||||||    
T  27181964 gaggggatgcaaaatcacacaattgacaaaagatagggggaaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 48359373 - 48359320
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| |||||  ||||  |||||||||||||||||||||||||    
T  48359373 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 13863964 - 13864012
Alignment:
Q  43 aaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  13863964 aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 13864012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 18864404 - 18864456
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcct 89  Q
    ||||||||||||| ||||| |||||  |||||||||||||| |||||||||||    
T  18864404 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaagcct 18864456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 18925114 - 18925062
Alignment:
Q  37 ggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcc 88  Q
    |||||||||| || |||||||||||||||||||  ||||||||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 36527437 - 36527373
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttttatatttt 99  Q
    ||||||||||||||| |||||  ||||  ||||||| |||||||||||||| |||||||| ||||    
T  36527437 ggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaaaccttttatctttt 36527373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 37972396 - 37972452
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||  ||||||| ||||||||||||||||||||    
T  37972396 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctt 37972452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 8643766 - 8643821
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| | |||||||||||  |||||||||||||||||||    
T  8643766 ggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagcct 8643821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 10533088 - 10533033
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||||||||||||||    
T  10533088 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 10533033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 29291863 - 29291808
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaag 86  Q
    ||||||||||||||||||  ||||| |||||||||||| | |||||||||||||||    
T  29291863 gagggggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 33628660 - 33628715
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||||| ||||||||| ||| |||||||||||| |||||    
T  33628660 ggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagcct 33628715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 37889259 - 37889314
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcct 89  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||||||||||||    
T  37889259 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37889314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 42419028 - 42419079
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||||||||||| ||| ||||| |||||  ||||||||||||||||||||||    
T  42419028 gggggtgcaaaaacgcacaattggcaaactatagggggaaaagtgcaattaa 42419079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 9035293 - 9035347
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  ||||||| ||||||||||||||||||    
T  9035293 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 15567046 - 15566984
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagccttttatat 96  Q
    ||||||||||||||| ||||||||||||  | ||| | |||| ||||||||||||||||||||    
T  15567046 ggggtgcaaaatcgcacaattagcaaaaagtggggagcaaaaatgcaattaagccttttatat 15566984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 20419324 - 20419382
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctttt 92  Q
    ||||||||||||||| |||||  ||||  ||||||| ||||||||||||||||||||||    
T  20419324 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctttt 20419382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 22740591 - 22740641
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    ||||||||||||||| |||||  ||||  ||||||||||||||||||||||    
T  22740591 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 37888887 - 37888833
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||||||||||||    
T  37888887 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 3204721 - 3204669
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||||||||||||    
T  3204721 ggggtgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaagcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 29292038 - 29292095
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcc 88  Q
    ||||||||| |||||||| ||||||||||||| ||| ||  |||||||||||||||||    
T  29292038 gagggggtggaaaatcgcacaattagcaaaagttagaggaaaaaagtgcaattaagcc 29292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 29292972 - 29292911
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagccttttatatttt 99  Q
    ||||||||||| ||||| |||||  |||||||| ||||||||||||||||||| ||| ||||    
T  29292972 tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccttctatttttt 29292911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 34235977 - 34236010
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagatag 67  Q
    |||||||||||||||| |||||||||||||||||    
T  34235977 gggggtgcaaaatcgcacaattagcaaaagatag 34236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 38191440 - 38191387
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaa-gatagggggaaaagtgcaatta 84  Q
    |||| ||||||||||||| ||||| |||||| |||||||| |||||||||||||    
T  38191440 gaggaggtgcaaaatcgcacaattggcaaaaagataggggaaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 3205093 - 3205149
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagcctt 90  Q
    ||||||||||||||| |||||  ||||  ||||||| ||||||||||||||||||||    
T  3205093 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 3205149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 9034922 - 9034866
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcct 89  Q
    ||||||||| |||||| ||||| |||||  |||||||| ||||||||||||||||||    
T  9034922 gggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 9034866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 17157021 - 17156965
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctt 90  Q
    ||||||||||||||| |||||  ||||  |||||||| |||||||||||||||||||    
T  17157021 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 17156965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 22740210 - 22740154
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctt 90  Q
    ||||||||||||||| |||||  ||||  |||||||| |||||||||||||||||||    
T  22740210 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 22740154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 35080223 - 35080263
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaa 75  Q
    ||||||||||||||| |||||| ||||||||| ||||||||    
T  35080223 ggggtgcaaaatcgcacaattaacaaaagataaggggaaaa 35080263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 7597 - 7653
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  7597 gagggggtacaaaatcgcacaattagcaaaagataggggaaaaagtgcaattaagcc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 7508 - 7453
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcctt 90  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  7508 ggggtgcaaaatcgcataattagcaaaagataggggaaaaagtgcaattaagcctt 7453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 17153 - 17209
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||| |||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  17153 gaggcggtgcaaaattgcacaattagcaaaagatagggggaaaagtgcaattaagcc 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 16908 - 16842
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttttatatttt 99  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||  |||||||||    
T  16908 gagggggtgcataatcgcacaattagcaaaagataggggaaaaag-gcaattaagccaattatatttt 16842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 1175 - 1118
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  1175 gagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 1417 - 1474
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcc 88  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  1417 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 411979 - 411923
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||    
T  411979 gagggggtgcaaaatcgcacaattgacaaaagatagggggtaaagtgcaattaagcc 411923  T

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Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 50506 - 50560
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    |||||||||||||||| ||||| |||||  |||||||||||||||||||||||||    
T  50506 gggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 50560  T

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Target: scaffold1221 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 1781 - 1834
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaa 85  Q
    |||| ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  1781 gaggaggtgcaaaatcgcacaataaacaaaagatagggggaaaagtgcaattaa 1834  T

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Target: scaffold1221; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 1564 - 1511
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||| | ||||| ||||||||||| || |||||||||||||||||    
T  1564 ggggtgcaaaatcacacaattggcaaaagatagaggaaaaagtgcaattaagcc 1511  T

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Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 6795 - 6855
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggg-gaaaagtgcaattaagccttttat 94  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||    
T  6795 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccctttat 6855  T

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Target: scaffold0328; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 6206 - 6152
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatag-ggggaaaagtgcaattaagcc 88  Q
    |||||| |||||||| ||||||||||||||||| || ||||||||||||||||||    
T  6206 ggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

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Target: scaffold0535 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 10062 - 10009
Alignment:
Q  39 tgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagccttt 91  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagccttt 10009  T

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Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 763 - 816
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||||||||||    
T  763 ggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaagcc 816  T

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Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 19674 - 19613
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagccttttatat 96  Q
    ||||||||||||||| ||||| |||||  ||| |||||||| ||||||||||||||| ||||    
T  19674 ggggtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaagcctttaatat 19613  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 38695 - 38751
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctt 90  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||||||||||||||    
T  38695 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcctt 38751  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 6877 - 6927
Alignment:
Q  36 gggtgcaaaatcgcgcaattagcaaaagatagggggaaaagtgcaattaagc 87  Q
    ||||||||||| || ||||| ||||||||||||||| |||||||||||||||    
T  6877 gggtgcaaaat-gcacaattggcaaaagataggggggaaagtgcaattaagc 6927  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 185274 - 185328
Alignment:
Q  35 ggggtgcaaaatcgcgcaattagcaaaagataggg-ggaaaagtgcaattaagcc 88  Q
    ||||||||||||||| ||||| |||||  |||||| |||||||||||||||||||    
T  185274 ggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 9960 - 9903
Alignment:
Q  34 gggggtgcaaaatcgcgcaattagcaaaagataggggg-aaaagtgcaattaagcctt 90  Q
    ||||||| |||||||| ||||| |||||  |||||||| |||||||||||||||||||    
T  9960 gggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcctt 9903  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 73023 - 72967
Alignment:
Q  32 gagggggtgcaaaatcgcgcaattagcaaaagat-agggggaaaagtgcaattaagc 87  Q
    |||| |||||||||| || ||||||||||||||| | |||||||| |||||||||||    
T  73023 gaggcggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaattaagc 72967  T

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