View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15426_low_32 (Length: 297)
Name: NF15426_low_32
Description: NF15426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15426_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 32 - 285
Target Start/End: Original strand, 24527472 - 24527725
Alignment:
| Q |
32 |
agaatgtataaagtacacttaatatgagtgtgtgcgcaacccaatgcaagagaaaaaacaattgacaacaaatgtgttaaatggatgatataatttcgtc |
131 |
Q |
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| T |
24527472 |
agaatgtataaagtacacttaatattagtgtgtgcgcaacccaatgcgagagaaaaaacaattgactacaaatgtgttaaatggatgatataatttcgtc |
24527571 |
T |
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| Q |
132 |
attagacgtgttaatcaaacacaagtgattgtataaattacactcgggatgagtatgtgtatgtgcaagcaactcgatatgagagaaaaaacaattcaac |
231 |
Q |
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|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
24527572 |
atcagacgtgttaatcaaaaacaagtgattgtataaattacactcgggatgagtatgtgtatgtgcaagcaactcgatatgagagaaaaaacaatccaac |
24527671 |
T |
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| Q |
232 |
ataagagaaactattataaaaatgagaaccatctttgtgtgcgacgtgtctgtg |
285 |
Q |
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|||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |
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| T |
24527672 |
ataagagaaactattataaaaatgagaatcatctttgcatgcgatgtgtctgtg |
24527725 |
T |
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