View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15427_low_4 (Length: 385)
Name: NF15427_low_4
Description: NF15427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15427_low_4 |
 | |
|
| [»] scaffold0400 (2 HSPs) |
| | |
|
| [»] scaffold0365 (2 HSPs) |
| | |
|
| [»] scaffold0289 (3 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 350; Significance: 0; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 18 - 375
Target Start/End: Original strand, 14522186 - 14522543
Alignment:
| Q |
18 |
cacttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14522186 |
cacttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattc |
14522285 |
T |
|
| Q |
118 |
tcatacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaa |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14522286 |
tcatacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcaacaaa |
14522385 |
T |
|
| Q |
218 |
attggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaa |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14522386 |
attggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaa |
14522485 |
T |
|
| Q |
318 |
gtttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14522486 |
gtttccacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
14522543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 15011549 - 15011193
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| || |||| |
|
|
| T |
15011549 |
acttgacctgtaggcagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgattatgttct |
15011450 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| |||| |||||| |||||||||||||||||| ||||| || |
|
|
| T |
15011449 |
catacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtacaggcttgtattcttttgtgcttgaagttcgacacaa |
15011350 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaag |
318 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| || |
|
|
| T |
15011349 |
aaggtatgagatcccataaacaattaatgctaacagtagagggcctagagtgagggatagaactagcaccaaaattttgttagtcttatgataatgaaat |
15011250 |
T |
|
| Q |
319 |
tttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
|| | ||| ||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
15011249 |
ttgccaccagatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15011193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 375
Target Start/End: Original strand, 14532308 - 14532664
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| || ||| |
|
|
| T |
14532308 |
acttgacctgtaggcaactctgctttgtaaacacttccatgccctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatggtct |
14532407 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||||| |
|
|
| T |
14532408 |
cgtacaccatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgcgtggttgtcttcttttgtgcttgaagtttgacaaaa |
14532507 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaag |
318 |
Q |
| |
|
||||||||||||| ||| |||| ||||| ||||||| || ||||||||||||| |||||||||||||||||| ||| |||| ||||||||||| ||| |
|
|
| T |
14532508 |
aaggtatgagatcccgtaagcaaaaaatgccaacaatagagtacctagagtgaggggtaaaactagcaccaaaatattgctagtcttatgactatgaaag |
14532607 |
T |
|
| Q |
319 |
tttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
|| | |||||||||||||||| | ||||||||||||||||||| |||||||||||| |
|
|
| T |
14532608 |
ttgccacctgatgttgagcaacacactaggccagagacattaccacacaagcctttg |
14532664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 15002656 - 15002300
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| || |||| |
|
|
| T |
15002656 |
acttgacctgtaggcagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgattatgttct |
15002557 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
| |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||| | || |||||| |||||||||||||||||| |||||||| |
|
|
| T |
15002556 |
cgtacaccatttttccatcaaagctccatatttcaaatagattttcaattttcaattcttgtgcaggcttgtattcttttgtgcttgaagttcgacaaaa |
15002457 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaag |
318 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
15002456 |
aaggtatgagatcccataaacaatcaatgctaacaatagagggccgagagtgagggatagaactagcaccaaaattttgttagtattatgactatgaaag |
15002357 |
T |
|
| Q |
319 |
tttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
| | ||| |||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
15002356 |
gtgccacccgatgttgagcaaggctctaggccagaaacattaccacacaagcctttg |
15002300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 15037568 - 15037213
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||| || |||| |
|
|
| T |
15037568 |
acttgacctgtgggcaactctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttcagtggcttcgataatgttct |
15037469 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| | | |||||| |||||||||||||||||| |||| ||| |
|
|
| T |
15037468 |
catacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtgctggcttgtgttcttttgtgcttgaagttcgac-aaa |
15037370 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaag |
318 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
15037369 |
gaggtatgagatcccataaacaatcaatgctaacaatagagggccgagagtgagggatagaactagcaccaaaattttgttagtattatgactatgaaag |
15037270 |
T |
|
| Q |
319 |
tttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
| | ||| ||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
15037269 |
gtgccacccgatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15037213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 371
Target Start/End: Complemental strand, 15017664 - 15017312
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||| || |||| |
|
|
| T |
15017664 |
acttgacctgaaggcaactctgctttgtaaacacttgcatgtcctccaaccccaatgagatgtttgttgtcaaaatcttccgtggcttcgattatgttct |
15017565 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| | || |||||| ||||| |||||||||||| |||||||| |
|
|
| T |
15017564 |
catacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgtattcttctgtgcttgaagttcgacaaaa |
15017465 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaag |
318 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || ||| ||||||||||| |||| |||||||||| |||||||||| || |||||| |||| || |
|
|
| T |
15017464 |
aaagtatgagatcccataaacaattaatgctaacagtagaggacctagagtgagtgatagaactagcacccaaattttgtttgtcttatgattatgaaac |
15017365 |
T |
|
| Q |
319 |
tttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcc |
371 |
Q |
| |
|
|| | ||| ||| |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
15017364 |
ttgccaccagatattgagcaaggctctaggccagagatattaccacacaagcc |
15017312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 15033001 - 15032651
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||| | ||||| ||||| |||||||||||| ||||||||||| || |||| |
|
|
| T |
15033001 |
acttgacctgtgggcaactctgctttgtaaacacttccatgtcctccaaccccaaggagatgcttgtcgtcaaaatcttcagtggcttcgattatgttct |
15032902 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
| ||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||||| | || |||||| |||||||| ||||||| | ||||| || |
|
|
| T |
15032901 |
cgtacaccattttgccatcaaagctccatatttcaaacagattttcaatttgaaattcttgtgcaggcttgtattcttttgcgcttgaaattcgacacaa |
15032802 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaag |
318 |
Q |
| |
|
||||||||||| |||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| || |
|
|
| T |
15032801 |
aaggtatgagatc------acaattaatgctaacagtagagggcctagagtgagggatagaactagcaccaaaattttgttagtcttatgattatgaaat |
15032708 |
T |
|
| Q |
319 |
tttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
|| | ||| ||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
15032707 |
ttgccaccagatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15032651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 25 - 309
Target Start/End: Complemental strand, 14504525 - 14504241
Alignment:
| Q |
25 |
cctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattctcataca |
124 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| | ||||| ||||||| |
|
|
| T |
14504525 |
cctgtaggcaactctgctttgtaaacacttccatgtcctccaaccccgatgagatgtttgttgtcaaactcttctgtggcttctacaatattttcataca |
14504426 |
T |
|
| Q |
125 |
ccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaattggta |
224 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||| || |||||||| || |||| |||||||||| | ||||| ||| | | | || |
|
|
| T |
14504425 |
ccatttttccatcaaaactccatattgaaaatagattttcagtgtgtgattcttctgcaaccttggattcttttgtgttcgaagttcgaaatagataata |
14504326 |
T |
|
| Q |
225 |
tgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatga |
309 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||| ||||||||||| || ||||| || |||||| |||||||||| |||||| |
|
|
| T |
14504325 |
ggagatcccataaccaaataatgctaacaaaaaaatgcctagagtgatgggtaaaattaccaccaattttttgttagtcttatga |
14504241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 309
Target Start/End: Complemental strand, 14468352 - 14468062
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||||| | || || | |
|
|
| T |
14468352 |
acttgacctgtaggcaactctgctttgtaaacacttccatgtcctccaaccccaatgagatgcttgttgtcaaactcttctgtggcttcaacaatgtttt |
14468253 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
||||||| |||||||||||||| |||||||||| ||||||||||||||| || |||||||| || |||| ||||||| || | ||||| ||| | | |
|
|
| T |
14468252 |
catacacaatttttccatcaaaactccatattgaaaatagattttcagtgtgtgattcttctgcaaccttggattcttttctgttcgaagttcgaaatag |
14468153 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatga |
309 |
Q |
| |
|
| || |||||||||||| |||||||||||||||| ||| ||||||||||| || ||||| || |||||| |||||||||| |||||| |
|
|
| T |
14468152 |
ataataggagatcccataaccaaataatgctaacaaaaaaatgcctagagtgatgggtaaaattaccaccaattttttgttagtcttatga |
14468062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 14483294 - 14483065
Alignment:
| Q |
25 |
cctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattctcataca |
124 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||| || ||||| |||| |
|
|
| T |
14483294 |
cctgtaggcaactctgctttgtaaacacttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttttgtggcttcgataatgttctcgtaca |
14483195 |
T |
|
| Q |
125 |
ccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaattggta |
224 |
Q |
| |
|
||||||||| |||||| |||||||||| |||||||||||||| || |||||||| || |||| ||||||| || ||||||| ||| | | | || |
|
|
| T |
14483194 |
ccatttttcaatcaaaactccatattgaaaatagattttcagggtgtgattcttctgcaaccttggattcttttttgtttgaagttcgaaatagataata |
14483095 |
T |
|
| Q |
225 |
tgagatcccataaacaaataatgctaacaa |
254 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |
|
|
| T |
14483094 |
tgagataccataaacaaataatgctaacaa |
14483065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 15041137 - 15041025
Alignment:
| Q |
18 |
cacttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagat---tcttgttgtcaaaatcttctgtggcttcgatgata |
114 |
Q |
| |
|
||||||||| || |||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
15041137 |
cacttgaccagtaggcaactctgctttgtaatcacttccatgtactccaaccccaatgagattgatcttgctgtcaaaatcttcagtggcttcgatgata |
15041038 |
T |
|
| Q |
115 |
ttctcatacacca |
127 |
Q |
| |
|
||||||||||||| |
|
|
| T |
15041037 |
ttctcatacacca |
15041025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 375
Target Start/End: Complemental strand, 15041029 - 15040937
Alignment:
| Q |
285 |
caccaaaattttgttagttttatga--ctatggaagtttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
|||||||||| ||||||| |||||| ||||| ||||| | ||| |||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
15041029 |
caccaaaattgtgttagtattatgagactatgaaagttgccaccagatgttgagcaatgctctaggccagagacattaccacacaagcctttg |
15040937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 13337 - 12972
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| || |||| |
|
|
| T |
13337 |
acttgacctgaaggcaactctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgattatgttct |
13238 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||| | |||||| ||||||| | ||||||||| | | || |
|
|
| T |
13237 |
catataccatttttccatcaaagctccatgttgcaaagagattttcagtttgaaattcttctgtaggcttgtattctttttttcttgaagtgtggtagaa |
13138 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgac-------- |
310 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| || || |||||||||| ||||||||| |||||||||||||||| ||||||| |
|
|
| T |
13137 |
aaggtatgagaacccataaacaaataatgctaacaatagagttccaagagtgaggggtaaaactagatccaaaattttgttagtcttatgactatgaaag |
13038 |
T |
|
| Q |
311 |
-tatggaagtttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
13037 |
ttatgaaagtttccacctgatgttgagcaaggctctagaccagagacattaccacacaagcctttg |
12972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 7037 - 6684
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||| ||||| || ||||||||||||||||||||||| ||| |||| | ||| ||||||| |||||||||||| ||||| || ||||| | || |||| |
|
|
| T |
7037 |
acttgtcctgtggggaactctgctttgtaaacacttccgtgtcctcctatcccaatgagatgcttgttgtcaaactcttcagttgcttcaacaatgttct |
6938 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||| |||||||||||||||||| ||||| || |
|
|
| T |
6937 |
catacaccaattttccatcaaagctccatattgcaaatagattttcagtttgaaattctcctgcagtcttgtattcttttgtgcttgaagttcgacataa |
6838 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaag |
318 |
Q |
| |
|
|| |||||| ||||||| |||||||||| |||||| || ||||||||||| || |||||| | ||||||||| | ||||| ||||||||||| ||| |
|
|
| T |
6837 |
aaggcatgagaggccataaagaaataatgctgacaatagagtgcctagagtgatgggtaaaacaaccaccaaaatgtgtttagtcttatgactatgaaag |
6738 |
T |
|
| Q |
319 |
tttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
|| | |||| |||||||||||||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
6737 |
ttaccacctaatgttgagcaaggctctaagccagag---ttaccacacaagcctttg |
6684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 13980 - 13615
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| || |||| |
|
|
| T |
13980 |
acttgacctgaaggcaactctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgattatgttct |
13881 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||| | |||||| ||||||| | ||||||||| | | || |
|
|
| T |
13880 |
catataccatttttccatcaaagctccatgttgcaaagagattttcagtttgaaattcttctgtaggcttgtattctttttttcttgaagtgtggtagaa |
13781 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgac-------- |
310 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| || || |||||||||| ||||||||| |||||||||||||||| ||||||| |
|
|
| T |
13780 |
aaggtatgagaacccataaacaaataatgctaacaatagagttccaagagtgaggggtaaaactagatccaaaattttgttagtcttatgactatgaaag |
13681 |
T |
|
| Q |
311 |
-tatggaagtttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
13680 |
ttatgaaagtttccacctgatgttgagcaaggctctagaccagagacattaccacacaagcctttg |
13615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 7681 - 7328
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||| ||||| || ||||||||||||||||||||||| ||| |||| | ||| ||||||| |||||||||||| ||||| || ||||| | || |||| |
|
|
| T |
7681 |
acttgtcctgtggggaactctgctttgtaaacacttccgtgtcctcctatcccaatgagatgcttgttgtcaaactcttcagttgcttcaacaatgttct |
7582 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagtgcgacaaaa |
218 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||| |||||||||||||||||| ||||| || |
|
|
| T |
7581 |
catacaccaattttccatcaaagctccatattgcaaatagattttcagtttgaaattctcctgcagtcttgtattcttttgtgcttgaagttcgacataa |
7482 |
T |
|
| Q |
219 |
ttggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagttttatgactatggaag |
318 |
Q |
| |
|
|| |||||| ||||||| |||||||||| |||||| || ||||||||||| || |||||| | ||||||||| | ||||| ||||||||||| ||| |
|
|
| T |
7481 |
aaggcatgagaggccataaagaaataatgctgacaatagagtgcctagagtgatgggtaaaacaaccaccaaaatgtgtttagtcttatgactatgaaag |
7382 |
T |
|
| Q |
319 |
tttctacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
375 |
Q |
| |
|
|| | |||| |||||||||||||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
7381 |
ttaccacctaatgttgagcaaggctctaagccagag---ttaccacacaagcctttg |
7328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 99; Significance: 9e-49; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 31 - 209
Target Start/End: Complemental strand, 17027426 - 17027248
Alignment:
| Q |
31 |
ggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattctcatacaccattt |
130 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||| ||||||| |||||||||||| ||||| ||||||||||| || |||||||||||||||| |
|
|
| T |
17027426 |
ggcaactctgcttggtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaactcttcggtggcttcgataatgttctcatacaccattt |
17027327 |
T |
|
| Q |
131 |
ttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagt |
209 |
Q |
| |
|
|||||||||||||||||| || ||||||||| ||||||||||||| |||| |||||| ||||||||| ||||||| |
|
|
| T |
17027326 |
ttccatcaaagctccatactgcaaatagattatcagtttgaaattattctgtcggcttgtattcttttgtcattgaagt |
17027248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 31 - 209
Target Start/End: Complemental strand, 17557918 - 17557740
Alignment:
| Q |
31 |
ggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattctcatacaccattt |
130 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||| ||||||| |||||||||||| ||||| ||||||||||| || |||||||||||||||| |
|
|
| T |
17557918 |
ggcaactctgcttggtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaactcttcggtggcttcgataatgttctcatacaccattt |
17557819 |
T |
|
| Q |
131 |
ttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgcttgaagt |
209 |
Q |
| |
|
|||||||||||||||||| || ||||||||| ||||||||||||| |||| |||||| ||||||||| ||||||| |
|
|
| T |
17557818 |
ttccatcaaagctccatactgcaaatagattatcagtttgaaattattctgtcggcttgtattcttttgtcattgaagt |
17557740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 5131 - 5275
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || |||| | || ||||||| ||||| ||||| |||||||||||||| || || |||| |
|
|
| T |
5131 |
acttgacctgagggcaactctgctttgtaaacacttccttgcgctcctagtccaatgagatgcttgtcatcaaactcttctgtggcttcaataatgttct |
5230 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
||||||||||||| |||||||| |||||||| ||||||| ||||| |
|
|
| T |
5231 |
catacaccattttcccatcaaaactccatatagtaaatacatttt |
5275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 13964 - 14108
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || |||| | || ||||||| ||||| ||||| |||||||||||||| || || |||| |
|
|
| T |
13964 |
acttgacctgagggcaactctgctttgtaaacacttccttgcgctcctagtccaatgagatgcttgtcatcaaactcttctgtggcttcaataatgttct |
14063 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
||||||||||||| |||||||| |||||||| ||||||| ||||| |
|
|
| T |
14064 |
catacaccattttcccatcaaaactccatatagtaaatacatttt |
14108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 17769 - 17817
Alignment:
| Q |
115 |
ttctcatacaccatttttccatcaaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||| ||||| |
|
|
| T |
17769 |
ttctcatacaccattttcccatcaaaactccatattgtaaatacatttt |
17817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 17849077 - 17848933
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| |||| | ||||||||||||||||| || |||| || |||||||||| || | |||||||||||||||||||| || ||| ||| |
|
|
| T |
17849077 |
acttgacctgtgtccaacacggctttgtaaacacttccctgccctcctactccgatgagatgtttatcatcaaaatcttctgtggcttcaataatactct |
17848978 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
17848977 |
catacaccatttttccatcaaaactccatatggtaaatagatttt |
17848933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 17825679 - 17825805
Alignment:
| Q |
37 |
tctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattctcatacaccatttttccat |
136 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||| || | |||||||| |||||||||| || |||||||||||||||||||| ||| |
|
|
| T |
17825679 |
tctgctttgtaaacacttccatgccctccaactccgatgagatgtttatcatcaaaatcgtctgtggcttgaataatattctcatacaccattttgtcat |
17825778 |
T |
|
| Q |
137 |
caaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
|||| |||||||| ||||||||||||| |
|
|
| T |
17825779 |
caaaactccatatggtaaatagatttt |
17825805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 15664805 - 15664949
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||| || |||| | || ||||||| ||||| ||||| ||||| || ||||| || || |||| |
|
|
| T |
15664805 |
acttgacctgtgggcaactttgctttgtaaacacttccttgcgctcctgctccaatgagatgcttgtcatcaaactcttccgttgcttcaataatgttct |
15664904 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||| ||||| |
|
|
| T |
15664905 |
catacaccattttcccatcaaaactccatattgtaaatacatttt |
15664949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 14606453 - 14606309
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| |||||| ||||||||| ||||||||||| ||||||| || ||||||| || | |||||||||||||||||||| | || |||| |
|
|
| T |
14606453 |
acttgacctgtgtgcaactttgctttgtagacacttccatgccctccaactccaatgagatgtttttcatcaaaatcttctgtggcttccaaaatgttct |
14606354 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
|||||| | ||||||||||||| |||||||||||| || ||||| |
|
|
| T |
14606353 |
catacaaaaattttccatcaaagttccatattgtaagtacatttt |
14606309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 15676639 - 15676783
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
|||||||||| |||| |||||||||||||| |||| || |||| || || ||||||| ||||| ||||| |||| ||||||||| || || |||| |
|
|
| T |
15676639 |
acttgacctgaatgcaaatctgctttgtaaacttttccttgcgctcctactccaatgagatgcttgtcatcaaactcttatgtggcttcaattatgttct |
15676738 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||| ||||| |
|
|
| T |
15676739 |
catacaccattttcccatcaaaactccatattgtaaatacatttt |
15676783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 16025630 - 16025486
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| |||||| ||||||||| ||||||||||| ||||||| || ||||||| || | |||||||||||||||||||| | || |||| |
|
|
| T |
16025630 |
acttgacctgtgtgcaactttgctttgtagacacttccatgccctccaactccaatgagatgtttttcatcaaaatcttctgtggcttccaaaatgttct |
16025531 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaatagatttt |
163 |
Q |
| |
|
|||||| | ||||||||||||| |||||||||||| || ||||| |
|
|
| T |
16025530 |
catacaaaaattttccatcaaagttccatattgtaagtacatttt |
16025486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 16173106 - 16172970
Alignment:
| Q |
19 |
acttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattct |
118 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||| || ||||||| || || |||| |||| |||||||||| ||||||||| | ||| |||| |
|
|
| T |
16173106 |
acttgacctgtgtgtaactctgctttgtaaacacttccttgccctccaactccaataagatatttgtcatcaaaatcttgtgtggcttccaagatgttct |
16173007 |
T |
|
| Q |
119 |
catacaccatttttccatcaaagctccatattgtaaa |
155 |
Q |
| |
|
| || |||||||||||||| || ||||||||||||| |
|
|
| T |
16173006 |
cgtagaccatttttccatcgaaattccatattgtaaa |
16172970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 164
Target Start/End: Complemental strand, 16103425 - 16103293
Alignment:
| Q |
32 |
gcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaatcttctgtggcttcgatgatattctcatacaccatttt |
131 |
Q |
| |
|
|||||| ||||||||| ||||||||||| | ||||| || || |||| || | |||||||||||||||||||| | || || ||| |||| ||||| |
|
|
| T |
16103425 |
gcaactttgctttgtagacacttccatgccccccaacaccaattagatgtttctcatcaaaatcttctgtggcttccacaatgttttcaaacacaatttt |
16103326 |
T |
|
| Q |
132 |
tccatcaaagctccatattgtaaatagattttc |
164 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||| |
|
|
| T |
16103325 |
tccatcaaagttccatattgtaaatacattttc |
16103293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 16025316 - 16025269
Alignment:
| Q |
327 |
tgatgttgagcaaggctctaggccagagacattaccgcacaagccttt |
374 |
Q |
| |
|
|||||||| ||| ||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
16025316 |
tgatgttgggcagggctctaagccagagacattaccacacaagccttt |
16025269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 37027247 - 37027186
Alignment:
| Q |
88 |
tcaaaatcttctgtggcttcgatgatattctcatacaccatttttccatcaaagctccatat |
149 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||| | |||||||| |
|
|
| T |
37027247 |
tcaaaatcctctgtggcttcaatgatattttcataaaccatttttccatcataactccatat |
37027186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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