View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15428_high_10 (Length: 551)
Name: NF15428_high_10
Description: NF15428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15428_high_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 427; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 19 - 551
Target Start/End: Complemental strand, 7905801 - 7905271
Alignment:
| Q |
19 |
gttatctccctcatattgtagcttcactcttgccatctcatcagacattgaaccttcttcttttaaacaggcccaaagtgatccacgttggcaacttgct |
118 |
Q |
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| T |
7905801 |
gttatctccctcatattgtagcttcactcttgccatctcatcagacattgaaccttcttcttttaaacaggcccaaagtgatccacgttggcaacttgct |
7905702 |
T |
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| Q |
119 |
atgtctcctgagctttagtgctttggaagcaactggaacatggatatttgtagatcctccccccaatatttctcccattggaagcaaatgggtcttcaag |
218 |
Q |
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| T |
7905701 |
atgtcccctgagc-ttagtgctttggaagcaactggaacatggatatttgtagatcctccccccaatatttctcccattggaagcaaatggatcttc-ag |
7905604 |
T |
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| Q |
219 |
attaaacggcatgccaatggttctattgagcgctatagagcacgtcttgtagccaagggttacaatcaaatcgaaggcgtggannnnnnnnnngcactct |
318 |
Q |
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| T |
7905603 |
attaaacggtatgccaatggttctattgagcgctataatgcatgtcttgtagccaagggttacaatcaaatcgaaggcgtggattttttttttacactct |
7905504 |
T |
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| Q |
319 |
ctctggtggaaaaactgtcaactgtttgattgttgcttgttgttgcttctataaaacgatggcatctccaccaattagacgttaacaacgccttcttgca |
418 |
Q |
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| T |
7905503 |
ctctggtggcaaaactgtcaattgtttgattgttgcttgctgttacttctattaaacgatggcatctccaccaattagacgctaacaacaccttcttgca |
7905404 |
T |
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| Q |
419 |
cggtgatcttcaagaggatgtctacatgcaccctcctcaaggtgtttctcctcctaggcctgggcaggtttgtaagctgctcaagtccttatacggcctc |
518 |
Q |
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| T |
7905403 |
cggtgatcttcaagaggatgtctacatgcaccctcctcaaggtgtttctcctcctaggcctgggcaggtttgtaagctgctcaagtccttatacggcctc |
7905304 |
T |
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| Q |
519 |
aaacatgccagccggcgttggtttgaaaagctt |
551 |
Q |
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| T |
7905303 |
aaacaagccagccggcgttggtttgaaaagctt |
7905271 |
T |
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