View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15428_high_14 (Length: 472)
Name: NF15428_high_14
Description: NF15428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15428_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 13 - 456
Target Start/End: Complemental strand, 8058310 - 8057867
Alignment:
| Q |
13 |
caaaggcaaagtaactaattaacatggtcatattctactaaactcatggcaaaaatatatgtagagactagagtttgaattccggattctccaccgattc |
112 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||| |||| |
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| T |
8058310 |
caaaggcaaagtaactaattaacatggtcatattctactaaacccatggcaaaaatatatgtagagactaaagttcgaattccggattcttcactaattc |
8058211 |
T |
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| Q |
113 |
accttaaagtgaaagttagtcactaaactacttgataaggaaaaaccacaagaatctaaatatatagacatgttccattacaagacctaaagaaaccaca |
212 |
Q |
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|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |
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| T |
8058210 |
accttaaagtgaaatctagtcactaaactacttgataagaaaaaaccacaagaatctaaatatattgacatgttccattacaagacctaaagaaacctca |
8058111 |
T |
|
| Q |
213 |
aaccaacttaatagattaaaaagtgcaaccactgcttagcctttctctgatctggaatttgtcaaacatcaacgttctttcttcttcctctccccatttt |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8058110 |
aaccaacttaatagattaaaaagtgcaaccactgcttagtctttctctgatctggaatttgtcaaacatcaacgttctttcttcttcctctccccatttt |
8058011 |
T |
|
| Q |
313 |
caataacattcagcaaaactttggcaccgtgtttctcccacacaggttttccattcatgtctttcatttgaagctcaagattattcacgtagaacccatc |
412 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8058010 |
caataacattcagcaaaactttggtaccgtgtttctcccacacagattttccattcatgtctttcatttgaagctcaagattattcacgtagaacccatc |
8057911 |
T |
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| Q |
413 |
atctccacctttccgatggcacgcgaccttcaccttacacttca |
456 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
8057910 |
atctccacctttccgatggcacgtgaccttcaccttacacttca |
8057867 |
T |
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