View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15428_high_16 (Length: 418)

Name: NF15428_high_16
Description: NF15428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15428_high_16
NF15428_high_16
[»] chr7 (81 HSPs)
chr7 (15-399)||(4482033-4482417)
chr7 (15-274)||(17948050-17948309)
chr7 (15-274)||(9640942-9641201)
chr7 (21-274)||(48345478-48345730)
chr7 (20-274)||(31499135-31499392)
chr7 (15-274)||(9323082-9323341)
chr7 (53-277)||(9609131-9609356)
chr7 (53-277)||(9836703-9836928)
chr7 (53-274)||(16915539-16915763)
chr7 (21-274)||(14278935-14279186)
chr7 (21-275)||(5617345-5617599)
chr7 (15-277)||(39294177-39294439)
chr7 (80-274)||(21677588-21677779)
chr7 (104-279)||(9058734-9058908)
chr7 (78-274)||(28388355-28388548)
chr7 (21-274)||(34243172-34243423)
chr7 (110-276)||(20587739-20587905)
chr7 (18-274)||(14938598-14938855)
chr7 (18-274)||(15366191-15366448)
chr7 (69-276)||(18081378-18081583)
chr7 (135-274)||(28717935-28718074)
chr7 (274-399)||(6912176-6912301)
chr7 (274-399)||(47574154-47574279)
chr7 (98-274)||(16381803-16381977)
chr7 (53-264)||(16930024-16930236)
chr7 (53-264)||(16935407-16935619)
chr7 (274-399)||(19034489-19034615)
chr7 (274-399)||(20720021-20720147)
chr7 (274-399)||(33230795-33230921)
chr7 (274-399)||(34282938-34283064)
chr7 (274-399)||(3794815-3794940)
chr7 (274-398)||(20764683-20764808)
chr7 (274-399)||(27735882-27736007)
chr7 (274-399)||(47164392-47164517)
chr7 (274-397)||(29490261-29490385)
chr7 (111-274)||(33555565-33555728)
chr7 (274-399)||(9148666-9148791)
chr7 (274-399)||(33030113-33030238)
chr7 (23-274)||(4444176-4444425)
chr7 (274-399)||(23767272-23767397)
chr7 (274-399)||(42686874-42686999)
chr7 (63-266)||(17922881-17923087)
chr7 (51-274)||(4436775-4437000)
chr7 (274-399)||(8926724-8926849)
chr7 (274-399)||(9227054-9227179)
chr7 (65-274)||(10862992-10863203)
chr7 (274-399)||(19520479-19520604)
chr7 (274-399)||(39649773-39649898)
chr7 (276-399)||(5962006-5962129)
chr7 (305-399)||(23300542-23300636)
chr7 (274-399)||(47173792-47173917)
chr7 (274-399)||(33639508-33639633)
chr7 (274-398)||(17481652-17481775)
chr7 (274-398)||(17571439-17571562)
chr7 (133-274)||(3194163-3194303)
chr7 (87-274)||(18921163-18921337)
chr7 (274-399)||(14308235-14308360)
chr7 (274-399)||(31898612-31898737)
chr7 (274-398)||(17477206-17477329)
chr7 (274-398)||(17575885-17576008)
chr7 (59-270)||(12245586-12245796)
chr7 (274-399)||(17170364-17170489)
chr7 (274-399)||(42917155-42917280)
chr7 (274-399)||(48528582-48528707)
chr7 (210-274)||(12182130-12182194)
chr7 (53-274)||(17230167-17230391)
chr7 (209-274)||(14303063-14303128)
chr7 (174-274)||(18366200-18366299)
chr7 (58-188)||(17926799-17926929)
chr7 (209-275)||(19380851-19380917)
chr7 (142-273)||(15953758-15953890)
chr7 (211-275)||(16205940-16206004)
chr7 (140-274)||(16651365-16651500)
chr7 (140-274)||(17625725-17625860)
chr7 (210-277)||(3135053-3135120)
chr7 (135-274)||(15980657-15980795)
chr7 (209-274)||(16370581-16370646)
chr7 (135-186)||(13460346-13460397)
chr7 (212-274)||(25122070-25122132)
chr7 (209-274)||(15305335-15305400)
chr7 (51-115)||(33557949-33558013)
[»] chr8 (73 HSPs)
chr8 (15-245)||(7468220-7468448)
chr8 (15-274)||(20707678-20707937)
chr8 (15-274)||(22499329-22499588)
chr8 (15-274)||(33170141-33170400)
chr8 (15-272)||(18043176-18043433)
chr8 (15-264)||(23118865-23119114)
chr8 (15-274)||(23216547-23216804)
chr8 (15-274)||(24265885-24266144)
chr8 (15-274)||(17264388-17264646)
chr8 (15-274)||(24554599-24554859)
chr8 (21-275)||(15931212-15931467)
chr8 (21-274)||(29295769-29296021)
chr8 (21-275)||(5851389-5851643)
chr8 (21-274)||(26009321-26009574)
chr8 (149-278)||(27233352-27233481)
chr8 (17-274)||(17499747-17500004)
chr8 (104-276)||(18263518-18263689)
chr8 (15-234)||(45561730-45561952)
chr8 (87-275)||(37655741-37655930)
chr8 (274-399)||(6301291-6301416)
chr8 (274-399)||(23967205-23967330)
chr8 (274-399)||(37029015-37029140)
chr8 (274-399)||(42061479-42061604)
chr8 (167-274)||(21234204-21234311)
chr8 (274-399)||(20663761-20663887)
chr8 (274-399)||(30549124-30549250)
chr8 (274-399)||(19247158-19247283)
chr8 (274-399)||(19320342-19320467)
chr8 (274-398)||(44213878-44214003)
chr8 (51-276)||(25607787-25608011)
chr8 (274-399)||(33425075-33425200)
chr8 (274-399)||(41906904-41907029)
chr8 (282-399)||(44939627-44939744)
chr8 (142-274)||(19334161-19334293)
chr8 (274-400)||(41155684-41155810)
chr8 (274-399)||(14079647-14079772)
chr8 (274-399)||(41627947-41628072)
chr8 (274-399)||(42811767-42811892)
chr8 (274-399)||(44383757-44383882)
chr8 (274-397)||(22357264-22357387)
chr8 (87-274)||(22725532-22725718)
chr8 (140-274)||(24236922-24237055)
chr8 (274-399)||(36602885-36603010)
chr8 (274-399)||(39203687-39203812)
chr8 (274-399)||(19396182-19396306)
chr8 (286-399)||(38961232-38961345)
chr8 (286-399)||(38991577-38991690)
chr8 (274-378)||(27629721-27629825)
chr8 (63-264)||(23229364-23229564)
chr8 (142-272)||(11599965-11600095)
chr8 (70-274)||(22883680-22883881)
chr8 (274-399)||(41976514-41976639)
chr8 (53-274)||(18770197-18770418)
chr8 (274-399)||(30825497-30825621)
chr8 (59-274)||(11541895-11542111)
chr8 (111-224)||(22317441-22317554)
chr8 (274-399)||(45294869-45294994)
chr8 (137-274)||(17731678-17731817)
chr8 (67-274)||(23833156-23833367)
chr8 (63-262)||(16000085-16000281)
chr8 (295-399)||(6478309-6478413)
chr8 (331-397)||(22345604-22345670)
chr8 (53-264)||(17283135-17283349)
chr8 (359-399)||(12759604-12759644)
chr8 (137-274)||(22738117-22738255)
chr8 (53-160)||(33613038-33613144)
chr8 (209-275)||(18120615-18120681)
chr8 (168-225)||(31196769-31196829)
chr8 (274-324)||(44598823-44598873)
chr8 (63-184)||(22311036-22311157)
chr8 (210-274)||(21192947-21193011)
chr8 (137-274)||(21695472-21695610)
chr8 (274-323)||(12759551-12759600)
[»] chr3 (90 HSPs)
chr3 (14-277)||(43429561-43429824)
chr3 (15-272)||(41659507-41659765)
chr3 (15-274)||(17320602-17320860)
chr3 (15-274)||(21168728-21168988)
chr3 (15-223)||(6817657-6817866)
chr3 (55-264)||(4164308-4164518)
chr3 (15-274)||(15551920-15552180)
chr3 (15-247)||(33371389-33371620)
chr3 (21-274)||(12950459-12950712)
chr3 (63-274)||(22637222-22637430)
chr3 (53-231)||(4147754-4147935)
chr3 (15-274)||(18967967-18968226)
chr3 (53-274)||(6230720-6230942)
chr3 (53-274)||(34557759-34557980)
chr3 (135-274)||(31416361-31416499)
chr3 (15-274)||(5230636-5230896)
chr3 (274-399)||(52841352-52841477)
chr3 (274-398)||(28164916-28165040)
chr3 (274-399)||(917981-918107)
chr3 (274-399)||(5253071-5253196)
chr3 (274-399)||(11951804-11951929)
chr3 (274-399)||(11952107-11952232)
chr3 (15-276)||(17760828-17761086)
chr3 (15-276)||(19062148-19062406)
chr3 (274-399)||(22477008-22477133)
chr3 (135-275)||(14182534-14182674)
chr3 (117-276)||(14819952-14820110)
chr3 (274-399)||(8242006-8242131)
chr3 (274-399)||(39797159-39797284)
chr3 (63-275)||(8602194-8602406)
chr3 (280-399)||(11598793-11598912)
chr3 (53-276)||(12019812-12020036)
chr3 (274-399)||(9879742-9879867)
chr3 (274-399)||(11326471-11326596)
chr3 (274-399)||(36168280-36168405)
chr3 (274-399)||(48975985-48976110)
chr3 (274-399)||(50772065-50772190)
chr3 (63-252)||(10902393-10902580)
chr3 (274-399)||(21700388-21700513)
chr3 (274-399)||(35436282-35436407)
chr3 (274-399)||(54512259-54512384)
chr3 (274-399)||(55295608-55295733)
chr3 (284-399)||(50740674-50740789)
chr3 (274-399)||(44073545-44073671)
chr3 (274-399)||(2845612-2845737)
chr3 (274-399)||(23192762-23192887)
chr3 (274-399)||(31369846-31369971)
chr3 (274-399)||(52854271-52854396)
chr3 (274-399)||(54793783-54793908)
chr3 (53-272)||(17202531-17202751)
chr3 (166-274)||(38378344-38378452)
chr3 (53-274)||(18009175-18009396)
chr3 (274-399)||(16495194-16495319)
chr3 (274-399)||(19894187-19894312)
chr3 (110-274)||(15548398-15548564)
chr3 (274-399)||(6104944-6105069)
chr3 (53-274)||(11884288-11884509)
chr3 (142-275)||(15988419-15988551)
chr3 (135-274)||(17390892-17391034)
chr3 (274-399)||(35088664-35088789)
chr3 (69-274)||(37918959-37919163)
chr3 (141-274)||(55513848-55513981)
chr3 (208-275)||(38815677-38815744)
chr3 (277-395)||(51247676-51247794)
chr3 (274-399)||(11382474-11382599)
chr3 (274-399)||(49112375-49112500)
chr3 (167-278)||(325284-325396)
chr3 (55-275)||(8687760-8687978)
chr3 (55-275)||(9039629-9039847)
chr3 (209-275)||(11517669-11517735)
chr3 (140-274)||(25769107-25769242)
chr3 (142-275)||(13330742-13330874)
chr3 (109-264)||(14061373-14061529)
chr3 (211-272)||(14967728-14967789)
chr3 (204-274)||(7254095-7254165)
chr3 (137-274)||(12490970-12491107)
chr3 (53-182)||(38813469-38813596)
chr3 (135-187)||(25106480-25106532)
chr3 (142-274)||(39653731-39653865)
chr3 (211-274)||(293777-293840)
chr3 (274-324)||(12168838-12168888)
chr3 (274-399)||(37616950-37617075)
chr3 (137-277)||(14286893-14287035)
chr3 (104-274)||(15874084-15874256)
chr3 (67-226)||(15515544-15515705)
chr3 (274-324)||(16340973-16341023)
chr3 (208-274)||(25607605-25607670)
chr3 (274-316)||(54648528-54648570)
chr3 (209-258)||(20418676-20418725)
chr3 (213-274)||(24902105-24902166)
[»] chr5 (67 HSPs)
chr5 (15-275)||(23236433-23236693)
chr5 (53-274)||(24082005-24082226)
chr5 (15-274)||(5623441-5623701)
chr5 (15-274)||(29911937-29912197)
chr5 (15-274)||(3420855-3421115)
chr5 (15-274)||(19871804-19872062)
chr5 (67-264)||(24228017-24228213)
chr5 (15-274)||(26561810-26562069)
chr5 (53-274)||(6454594-6454817)
chr5 (274-399)||(37463650-37463776)
chr5 (70-274)||(16837814-16838017)
chr5 (104-274)||(5453441-5453613)
chr5 (274-399)||(1852744-1852869)
chr5 (274-399)||(3211024-3211149)
chr5 (274-399)||(3397968-3398093)
chr5 (274-399)||(12589107-12589232)
chr5 (282-399)||(19394764-19394881)
chr5 (63-226)||(21614949-21615113)
chr5 (274-399)||(33611967-33612092)
chr5 (15-274)||(14345694-14345952)
chr5 (167-275)||(22879786-22879894)
chr5 (274-399)||(31296358-31296484)
chr5 (274-399)||(289875-290000)
chr5 (53-275)||(21228439-21228662)
chr5 (274-393)||(19447398-19447517)
chr5 (274-399)||(2194432-2194557)
chr5 (18-198)||(11963561-11963742)
chr5 (274-399)||(20996771-20996896)
chr5 (274-399)||(26321902-26322027)
chr5 (274-398)||(7284944-7285068)
chr5 (274-399)||(3027727-3027852)
chr5 (274-399)||(3151430-3151555)
chr5 (274-399)||(20349208-20349332)
chr5 (274-399)||(27065169-27065294)
chr5 (274-399)||(30141841-30141966)
chr5 (68-274)||(19860213-19860421)
chr5 (69-272)||(23411879-23412081)
chr5 (274-399)||(4881552-4881677)
chr5 (278-399)||(21029379-21029500)
chr5 (137-272)||(28887783-28887919)
chr5 (274-399)||(34716928-34717053)
chr5 (208-275)||(11963146-11963213)
chr5 (68-277)||(37190190-37190401)
chr5 (274-399)||(41690614-41690739)
chr5 (274-398)||(30688582-30688706)
chr5 (135-276)||(11765856-11765996)
chr5 (274-399)||(25697339-25697464)
chr5 (208-272)||(33628770-33628834)
chr5 (63-182)||(20456635-20456754)
chr5 (208-275)||(37985730-37985797)
chr5 (67-274)||(13793026-13793236)
chr5 (198-274)||(32968393-32968469)
chr5 (141-274)||(37483140-37483274)
chr5 (211-274)||(18533106-18533168)
chr5 (138-274)||(430687-430824)
chr5 (274-399)||(22606008-22606133)
chr5 (274-399)||(36385526-36385651)
chr5 (137-275)||(23491804-23491943)
chr5 (142-236)||(3671349-3671443)
chr5 (274-324)||(34375302-34375352)
chr5 (211-274)||(22056071-22056133)
chr5 (137-225)||(23452807-23452895)
chr5 (137-225)||(23460051-23460139)
chr5 (137-225)||(23464312-23464400)
chr5 (212-274)||(18226382-18226444)
chr5 (208-274)||(32948965-32949031)
chr5 (53-93)||(22881471-22881511)
[»] chr1 (59 HSPs)
chr1 (15-275)||(40555264-40555524)
chr1 (15-264)||(5770220-5770469)
chr1 (53-275)||(29217046-29217267)
chr1 (15-276)||(21193049-21193310)
chr1 (15-274)||(41213683-41213941)
chr1 (53-274)||(46143668-46143890)
chr1 (15-275)||(5472417-5472681)
chr1 (18-274)||(50001972-50002229)
chr1 (15-237)||(33383849-33384071)
chr1 (15-274)||(52397550-52397809)
chr1 (53-274)||(37236018-37236241)
chr1 (77-274)||(18164101-18164294)
chr1 (15-274)||(21041682-21041941)
chr1 (53-274)||(20957093-20957312)
chr1 (274-399)||(50560362-50560487)
chr1 (53-232)||(9293461-9293641)
chr1 (274-399)||(18111027-18111152)
chr1 (274-399)||(29841503-29841628)
chr1 (274-399)||(43255369-43255494)
chr1 (274-399)||(50395783-50395908)
chr1 (75-275)||(78576-78776)
chr1 (53-274)||(17606816-17607038)
chr1 (274-399)||(42681699-42681824)
chr1 (15-264)||(40438355-40438589)
chr1 (63-274)||(22837679-22837893)
chr1 (274-399)||(18813528-18813653)
chr1 (274-394)||(15314570-15314690)
chr1 (274-399)||(10762863-10762988)
chr1 (274-399)||(28566533-28566658)
chr1 (274-399)||(34686896-34687021)
chr1 (274-399)||(34691434-34691559)
chr1 (274-395)||(38846044-38846165)
chr1 (142-274)||(12891478-12891609)
chr1 (135-274)||(20191653-20191792)
chr1 (274-399)||(10695005-10695130)
chr1 (274-399)||(12713787-12713911)
chr1 (53-275)||(17021446-17021669)
chr1 (274-399)||(51966538-51966662)
chr1 (280-399)||(41830865-41830984)
chr1 (274-399)||(13663218-13663343)
chr1 (110-274)||(22148521-22148683)
chr1 (143-274)||(25090964-25091095)
chr1 (274-399)||(31618998-31619123)
chr1 (274-399)||(52309143-52309268)
chr1 (274-399)||(52522384-52522509)
chr1 (63-274)||(38035628-38035839)
chr1 (274-399)||(4891438-4891563)
chr1 (274-399)||(29186924-29187049)
chr1 (274-399)||(33361047-33361172)
chr1 (142-263)||(19601094-19601215)
chr1 (132-274)||(27672677-27672821)
chr1 (274-399)||(41963746-41963869)
chr1 (209-274)||(21223612-21223677)
chr1 (274-391)||(26432514-26432631)
chr1 (135-274)||(36358450-36358590)
chr1 (274-399)||(48339633-48339758)
chr1 (274-320)||(20764200-20764246)
chr1 (68-119)||(25092904-25092955)
chr1 (209-274)||(16243629-16243694)
[»] chr6 (65 HSPs)
chr6 (51-274)||(15006691-15006913)
chr6 (15-275)||(12311029-12311288)
chr6 (18-274)||(34964822-34965078)
chr6 (77-276)||(19670424-19670621)
chr6 (53-274)||(29603465-29603686)
chr6 (15-276)||(29162939-29163201)
chr6 (53-275)||(22846012-22846232)
chr6 (21-275)||(25649144-25649395)
chr6 (135-274)||(31469657-31469795)
chr6 (53-274)||(22595723-22595944)
chr6 (15-274)||(33540257-33540515)
chr6 (135-274)||(19852190-19852329)
chr6 (15-197)||(22468132-22468314)
chr6 (274-399)||(33978257-33978383)
chr6 (274-399)||(13457549-13457674)
chr6 (274-399)||(249196-249322)
chr6 (130-274)||(17085688-17085832)
chr6 (274-399)||(1074100-1074225)
chr6 (274-399)||(17938807-17938932)
chr6 (274-399)||(18599823-18599948)
chr6 (274-399)||(25532550-25532675)
chr6 (274-399)||(12580633-12580757)
chr6 (276-399)||(22374689-22374812)
chr6 (282-399)||(11946306-11946423)
chr6 (274-399)||(7222029-7222154)
chr6 (130-276)||(6092417-6092563)
chr6 (137-274)||(7830056-7830194)
chr6 (135-274)||(16373877-16374016)
chr6 (280-394)||(33322295-33322409)
chr6 (274-399)||(1080428-1080553)
chr6 (275-396)||(34320378-34320499)
chr6 (280-399)||(2520454-2520573)
chr6 (274-399)||(34855240-34855365)
chr6 (133-274)||(941175-941315)
chr6 (274-393)||(7219707-7219826)
chr6 (135-274)||(17858513-17858651)
chr6 (110-274)||(16889923-16890091)
chr6 (137-274)||(22364380-22364518)
chr6 (274-399)||(1219862-1219987)
chr6 (274-399)||(4423669-4423794)
chr6 (274-399)||(9979885-9980010)
chr6 (274-399)||(11517233-11517358)
chr6 (274-399)||(14888774-14888899)
chr6 (26-102)||(19852327-19852404)
chr6 (274-399)||(24445265-24445390)
chr6 (208-276)||(17375929-17375997)
chr6 (110-274)||(17791275-17791445)
chr6 (104-275)||(21621016-21621188)
chr6 (340-399)||(15275009-15275068)
chr6 (209-276)||(25782577-25782644)
chr6 (142-278)||(25917575-25917711)
chr6 (208-274)||(14150468-14150534)
chr6 (135-272)||(23218873-23219010)
chr6 (135-274)||(25369583-25369723)
chr6 (137-274)||(21927385-21927524)
chr6 (182-274)||(23025029-23025120)
chr6 (135-274)||(16131147-16131286)
chr6 (186-274)||(15081047-15081136)
chr6 (197-237)||(9192155-9192195)
chr6 (109-225)||(21411514-21411631)
chr6 (274-324)||(15274893-15274943)
chr6 (282-324)||(30043752-30043794)
chr6 (209-261)||(4174893-4174945)
chr6 (209-261)||(4230522-4230574)
chr6 (275-399)||(11269890-11270013)
[»] chr4 (77 HSPs)
chr4 (15-274)||(47470357-47470618)
chr4 (15-274)||(13596044-13596303)
chr4 (15-274)||(19557223-19557480)
chr4 (58-274)||(18241254-18241471)
chr4 (15-274)||(50224180-50224440)
chr4 (15-274)||(10239465-10239724)
chr4 (33-274)||(41258424-41258663)
chr4 (77-274)||(13449102-13449296)
chr4 (91-274)||(5407062-5407243)
chr4 (53-274)||(18274701-18274923)
chr4 (15-264)||(41919273-41919521)
chr4 (274-399)||(15520168-15520293)
chr4 (280-399)||(35712954-35713073)
chr4 (274-399)||(10260167-10260293)
chr4 (274-399)||(19590165-19590291)
chr4 (274-399)||(21564162-21564288)
chr4 (274-399)||(24078236-24078362)
chr4 (274-399)||(26925106-26925232)
chr4 (274-399)||(43331683-43331809)
chr4 (274-399)||(741122-741247)
chr4 (34-264)||(7966641-7966875)
chr4 (274-399)||(40621466-40621591)
chr4 (104-274)||(42706675-42706846)
chr4 (274-399)||(51451750-51451876)
chr4 (274-399)||(17698326-17698451)
chr4 (274-399)||(35496356-35496481)
chr4 (274-399)||(39745690-39745815)
chr4 (143-274)||(12729297-12729428)
chr4 (274-399)||(13627372-13627497)
chr4 (274-399)||(19832230-19832355)
chr4 (274-399)||(34057408-34057533)
chr4 (274-399)||(53341730-53341855)
chr4 (15-274)||(19624060-19624317)
chr4 (274-399)||(1943816-1943941)
chr4 (135-274)||(14569296-14569433)
chr4 (274-394)||(17739360-17739480)
chr4 (53-274)||(12246299-12246519)
chr4 (274-399)||(14830355-14830480)
chr4 (274-399)||(23478228-23478353)
chr4 (274-399)||(28135899-28136024)
chr4 (274-387)||(33503843-33503956)
chr4 (274-399)||(47720903-47721028)
chr4 (274-399)||(55999541-55999666)
chr4 (53-274)||(7187989-7188212)
chr4 (53-274)||(14867269-14867491)
chr4 (137-270)||(41168061-41168195)
chr4 (274-399)||(5274588-5274713)
chr4 (274-399)||(7644953-7645078)
chr4 (137-276)||(13814990-13815130)
chr4 (274-399)||(39715343-39715468)
chr4 (274-399)||(54332486-54332611)
chr4 (142-274)||(54366200-54366332)
chr4 (167-274)||(38762670-38762777)
chr4 (69-274)||(12136362-12136567)
chr4 (15-127)||(15216265-15216378)
chr4 (350-399)||(28121053-28121102)
chr4 (274-399)||(52800363-52800488)
chr4 (63-274)||(5373189-5373399)
chr4 (274-394)||(36856421-36856541)
chr4 (207-274)||(12370653-12370720)
chr4 (137-274)||(15853428-15853566)
chr4 (141-274)||(24236830-24236964)
chr4 (53-182)||(34198231-34198359)
chr4 (139-274)||(15116449-15116585)
chr4 (202-275)||(17214051-17214124)
chr4 (274-399)||(33489753-33489878)
chr4 (168-277)||(19824648-19824759)
chr4 (274-393)||(43017964-43018083)
chr4 (274-320)||(28121103-28121149)
chr4 (274-324)||(28972413-28972463)
chr4 (208-274)||(31113600-31113665)
chr4 (69-261)||(19083018-19083211)
chr4 (209-274)||(12350870-12350935)
chr4 (219-272)||(13047565-13047618)
chr4 (213-274)||(17378413-17378473)
chr4 (209-274)||(33240218-33240282)
chr4 (210-274)||(12338883-12338947)
[»] scaffold0003 (1 HSPs)
scaffold0003 (53-277)||(99034-99258)
[»] scaffold0004 (2 HSPs)
scaffold0004 (15-279)||(84309-84573)
scaffold0004 (15-237)||(25479-25702)
[»] chr2 (63 HSPs)
chr2 (15-274)||(24271938-24272198)
chr2 (15-274)||(6092343-6092601)
chr2 (20-275)||(30995012-30995265)
chr2 (67-274)||(43640240-43640446)
chr2 (53-274)||(19435982-19436203)
chr2 (15-127)||(25132255-25132368)
chr2 (274-399)||(6343542-6343667)
chr2 (274-399)||(9917523-9917648)
chr2 (274-399)||(14324026-14324151)
chr2 (274-398)||(1993755-1993879)
chr2 (21-275)||(32738355-32738609)
chr2 (274-399)||(3710230-3710356)
chr2 (274-399)||(11867060-11867186)
chr2 (274-399)||(35358453-35358579)
chr2 (274-399)||(28501619-28501744)
chr2 (274-399)||(4810885-4811010)
chr2 (274-399)||(18093543-18093668)
chr2 (274-399)||(10048815-10048940)
chr2 (274-398)||(14752509-14752633)
chr2 (274-398)||(30567686-30567810)
chr2 (276-399)||(11446987-11447110)
chr2 (104-265)||(22137924-22138085)
chr2 (53-274)||(19647975-19648196)
chr2 (274-399)||(9544438-9544563)
chr2 (282-399)||(33664615-33664732)
chr2 (274-399)||(36633906-36634031)
chr2 (274-399)||(42884727-42884852)
chr2 (274-399)||(16883272-16883397)
chr2 (274-399)||(17040962-17041087)
chr2 (274-399)||(21097035-21097160)
chr2 (53-274)||(25303476-25303699)
chr2 (53-274)||(5328-5549)
chr2 (274-376)||(19168454-19168556)
chr2 (274-399)||(45205854-45205980)
chr2 (274-399)||(4291466-4291591)
chr2 (274-399)||(7361346-7361471)
chr2 (64-275)||(24296642-24296852)
chr2 (282-399)||(26820964-26821081)
chr2 (167-274)||(19655404-19655512)
chr2 (328-399)||(1515821-1515892)
chr2 (137-274)||(23823642-23823779)
chr2 (137-274)||(23825586-23825723)
chr2 (166-274)||(9783040-9783149)
chr2 (210-274)||(20021763-20021827)
chr2 (209-277)||(24381658-24381726)
chr2 (67-275)||(40642407-40642613)
chr2 (192-277)||(25593125-25593210)
chr2 (209-274)||(34875919-34875984)
chr2 (141-274)||(24839315-24839449)
chr2 (213-276)||(19110521-19110584)
chr2 (137-225)||(24089571-24089660)
chr2 (274-324)||(26826864-26826914)
chr2 (274-324)||(33906609-33906659)
chr2 (211-272)||(19643763-19643824)
chr2 (63-237)||(18533282-18533459)
chr2 (137-184)||(32390-32437)
chr2 (109-274)||(7319295-7319459)
chr2 (357-399)||(16725180-16725222)
chr2 (137-225)||(22582145-22582234)
chr2 (208-274)||(24343615-24343680)
chr2 (212-274)||(25255567-25255629)
chr2 (135-274)||(20270820-20270963)
chr2 (137-274)||(28969774-28969913)
[»] scaffold0327 (1 HSPs)
scaffold0327 (53-276)||(6948-7170)
[»] scaffold0442 (2 HSPs)
scaffold0442 (15-275)||(1992-2255)
scaffold0442 (51-275)||(14160-14392)
[»] scaffold0107 (1 HSPs)
scaffold0107 (21-274)||(11327-11580)
[»] scaffold0148 (1 HSPs)
scaffold0148 (110-274)||(35814-35977)
[»] scaffold0480 (1 HSPs)
scaffold0480 (77-274)||(11086-11283)
[»] scaffold0174 (2 HSPs)
scaffold0174 (15-274)||(464-725)
scaffold0174 (209-274)||(22779-22844)
[»] scaffold0031 (1 HSPs)
scaffold0031 (21-274)||(99222-99474)
[»] scaffold0387 (1 HSPs)
scaffold0387 (53-278)||(3086-3313)
[»] scaffold0193 (1 HSPs)
scaffold0193 (15-274)||(2833-3092)
[»] scaffold0133 (1 HSPs)
scaffold0133 (77-274)||(3771-3965)
[»] scaffold0561 (1 HSPs)
scaffold0561 (63-274)||(4814-5025)
[»] scaffold0010 (2 HSPs)
scaffold0010 (21-275)||(28993-29247)
scaffold0010 (274-399)||(119342-119466)
[»] scaffold0115 (1 HSPs)
scaffold0115 (69-275)||(19230-19435)
[»] scaffold0236 (1 HSPs)
scaffold0236 (53-274)||(25430-25652)
[»] scaffold0219 (2 HSPs)
scaffold0219 (135-274)||(26160-26300)
scaffold0219 (53-164)||(26030-26142)
[»] scaffold0001 (1 HSPs)
scaffold0001 (137-275)||(141401-141538)
[»] scaffold0020 (1 HSPs)
scaffold0020 (141-274)||(103876-104008)
[»] scaffold0165 (1 HSPs)
scaffold0165 (77-274)||(20036-20230)
[»] scaffold0006 (3 HSPs)
scaffold0006 (130-274)||(199482-199626)
scaffold0006 (274-399)||(65459-65584)
scaffold0006 (274-399)||(152983-153108)
[»] scaffold0151 (1 HSPs)
scaffold0151 (35-274)||(31686-31928)
[»] scaffold0080 (1 HSPs)
scaffold0080 (56-274)||(25676-25897)
[»] scaffold0021 (2 HSPs)
scaffold0021 (15-214)||(19838-20037)
scaffold0021 (15-214)||(29414-29613)
[»] scaffold0028 (2 HSPs)
scaffold0028 (66-277)||(77620-77833)
scaffold0028 (167-274)||(70474-70583)
[»] scaffold0045 (1 HSPs)
scaffold0045 (274-399)||(13675-13800)
[»] scaffold0009 (2 HSPs)
scaffold0009 (63-275)||(99013-99226)
scaffold0009 (53-226)||(66481-66654)
[»] scaffold0047 (3 HSPs)
scaffold0047 (21-276)||(2148-2403)
scaffold0047 (63-274)||(73356-73567)
scaffold0047 (274-399)||(27189-27314)
[»] scaffold0090 (1 HSPs)
scaffold0090 (21-275)||(7174-7425)
[»] scaffold0079 (1 HSPs)
scaffold0079 (274-399)||(11158-11283)
[»] scaffold0032 (5 HSPs)
scaffold0032 (35-274)||(106655-106893)
scaffold0032 (88-274)||(101893-102079)
scaffold0032 (274-399)||(5084-5209)
scaffold0032 (274-399)||(11533-11658)
scaffold0032 (208-274)||(122165-122231)
[»] scaffold0175 (1 HSPs)
scaffold0175 (50-276)||(7238-7463)
[»] scaffold0005 (2 HSPs)
scaffold0005 (274-399)||(9229-9354)
scaffold0005 (135-274)||(247943-248080)
[»] scaffold0786 (1 HSPs)
scaffold0786 (104-265)||(4646-4807)
[»] scaffold0390 (2 HSPs)
scaffold0390 (104-265)||(3179-3340)
scaffold0390 (133-265)||(16163-16296)
[»] scaffold0051 (1 HSPs)
scaffold0051 (274-399)||(49369-49494)
[»] scaffold1949 (1 HSPs)
scaffold1949 (167-274)||(1091-1199)
[»] scaffold0025 (3 HSPs)
scaffold0025 (53-226)||(51250-51424)
scaffold0025 (208-274)||(7607-7672)
scaffold0025 (141-274)||(2377-2510)
[»] scaffold0725 (1 HSPs)
scaffold0725 (64-274)||(6976-7186)
[»] scaffold0017 (1 HSPs)
scaffold0017 (63-274)||(10175-10385)
[»] scaffold0088 (1 HSPs)
scaffold0088 (63-272)||(45653-45862)
[»] scaffold0521 (1 HSPs)
scaffold0521 (116-275)||(6463-6623)
[»] scaffold0253 (2 HSPs)
scaffold0253 (171-274)||(9600-9704)
scaffold0253 (171-274)||(19025-19129)
[»] scaffold0138 (2 HSPs)
scaffold0138 (110-274)||(24546-24712)
scaffold0138 (15-128)||(18667-18779)
[»] scaffold0456 (1 HSPs)
scaffold0456 (116-274)||(12778-12938)
[»] scaffold0013 (1 HSPs)
scaffold0013 (67-274)||(33367-33574)
[»] scaffold1068 (2 HSPs)
scaffold1068 (198-274)||(1210-1286)
scaffold1068 (53-122)||(1293-1362)
[»] scaffold0503 (1 HSPs)
scaffold0503 (110-264)||(9259-9420)
[»] scaffold0216 (1 HSPs)
scaffold0216 (63-264)||(23181-23382)
[»] scaffold0057 (2 HSPs)
scaffold0057 (274-399)||(19204-19329)
scaffold0057 (208-272)||(3854-3917)
[»] scaffold0385 (1 HSPs)
scaffold0385 (210-274)||(12684-12748)
[»] scaffold0409 (2 HSPs)
scaffold0409 (208-274)||(3035-3101)
scaffold0409 (208-274)||(11290-11356)
[»] scaffold0086 (1 HSPs)
scaffold0086 (210-274)||(34364-34428)
[»] scaffold0069 (1 HSPs)
scaffold0069 (303-399)||(13134-13230)
[»] scaffold0357 (2 HSPs)
scaffold0357 (213-272)||(5649-5708)
scaffold0357 (53-185)||(5708-5840)
[»] scaffold0329 (1 HSPs)
scaffold0329 (209-275)||(1011-1077)
[»] scaffold0557 (1 HSPs)
scaffold0557 (211-275)||(438-502)
[»] scaffold0601 (1 HSPs)
scaffold0601 (208-275)||(3593-3660)
[»] scaffold0258 (1 HSPs)
scaffold0258 (209-272)||(8197-8260)
[»] scaffold0112 (1 HSPs)
scaffold0112 (211-274)||(4784-4847)
[»] scaffold0049 (1 HSPs)
scaffold0049 (69-264)||(34976-35173)
[»] scaffold0022 (2 HSPs)
scaffold0022 (135-276)||(107478-107620)
scaffold0022 (15-82)||(129961-130029)
[»] scaffold0231 (1 HSPs)
scaffold0231 (135-274)||(15997-16137)
[»] scaffold0205 (1 HSPs)
scaffold0205 (63-187)||(4448-4574)
[»] scaffold0161 (1 HSPs)
scaffold0161 (211-273)||(25281-25343)
[»] scaffold0092 (1 HSPs)
scaffold0092 (186-274)||(1227-1316)
[»] scaffold0035 (1 HSPs)
scaffold0035 (197-261)||(64665-64729)
[»] scaffold0589 (1 HSPs)
scaffold0589 (137-274)||(5675-5813)
[»] scaffold0331 (1 HSPs)
scaffold0331 (63-227)||(11291-11454)
[»] scaffold0177 (1 HSPs)
scaffold0177 (166-274)||(21332-21442)
[»] scaffold0347 (1 HSPs)
scaffold0347 (211-258)||(3256-3303)
[»] scaffold0066 (2 HSPs)
scaffold0066 (212-275)||(43795-43858)
scaffold0066 (212-274)||(51966-52028)
[»] scaffold1884 (1 HSPs)
scaffold1884 (274-324)||(1114-1164)
[»] scaffold0242 (1 HSPs)
scaffold0242 (274-324)||(4357-4407)


Alignment Details
Target: chr7 (Bit Score: 361; Significance: 0; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 15 - 399
Target Start/End: Complemental strand, 4482417 - 4482033
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4482417 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 4482318  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtcta 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4482317 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtcta 4482218  T
Q  215 tttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacacatactgcatcactattggaaaaacagctaaattcaatcc 314  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  4482217 ttttttgaatatttatattattcgtgtgttttaccgctttaatagaaataaggcgttacacatactgcatcactatttggaaaacagctaaattcaatcc 4482118  T
Q  315 taaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagctatagatgcacatgc 399  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4482117 taaccagtttagatgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagctatagatgcacatgc 4482033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 17948050 - 17948309
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | || ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  17948050 gattattctagattgtttattctggatttatttatgttgttgagatttgcccatttgtcgggatttggagaatttttatgatgatgtattttgatctcat 17948149  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| ||||| | || |||| ||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  17948150 gtcatgtatacttttgaggtgtatgatttatatccgctgcaactgttgagaatttttatatatgcatgttg-tttggattttgttgatgatgtagcgtct 17948248  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||||  ||||||||    
T  17948249 atttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagtgcgttaca 17948309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 9641201 - 9640942
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | |||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||    
T  9641201 gattattctagattgtttattctggatttatttatgttgtggagatttgcccatttatcgggatttggagaatttttatgatgttgtattttgatctcat 9641102  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||  ||||  |  | |||| | |||||||| |||||||||||||| |||||||| |||| |||||||| ||||||||||||||| || |||||     
T  9641101 ggcatgtagactttggagatgtatgatctatatccgatgcaactgttgaaaatttttatatatgcctgttgttt-ggattttgttgatgacgtagcgtcg 9641003  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| ||||  |||||||| |||||||| ||||||| |||||||||    
T  9641002 atttcttgaatatttatatgattcgcgtgttttatcgctttaaaagaaatagggcgttaca 9640942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 21 - 274
Target Start/End: Complemental strand, 48345730 - 48345478
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcat 118  Q
    |||||||| | | |||||||||||||  ||||| |||||||| |||||||||||||| |||||||||||||| | || ||||| || ||| ||||| |||    
T  48345730 tctagattatctgttttggatttatt--catgttggagatttacccatttgtcgggacttggagaacttttaagttgatgtatttttgatatcatgacat 48345633  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgtt-gatgatgtggcgtctattt 217  Q
    ||||||||| || |||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| ||||  || ||||||||||    
T  48345632 gtatgctttgaa-gtatatggtttatatccgctgcgactgttgagattttt-atacatgcatgttgttttggattttgtttgatggcgtagcgtctattt 48345535  T
Q  218 cttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||| | |||||||  ||||||||| |||||||||||||||| |||||||||    
T  48345534 cttgaatatatgtattatttgtgtgttttatcgctttaatagaaatagggcgttaca 48345478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 20 - 274
Target Start/End: Complemental strand, 31499392 - 31499135
Alignment:
Q  20 ttctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcat 118  Q
    ||||||||||||  |||||||||||||||  | |||||||||| |||| |||||||||||| ||||| ||||||| || | ||| ||||| ||||| |||    
T  31499392 ttctagattgttcgttttggatttatttatgttgtggagatttacccaattgtcgggattttgagaatttttatgttgatatattttgatatcatgacat 31499293  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctatt 216  Q
    | || ||||| | || |||| |||||||||||||| |||||| | | |||||||||||||||||| ||||||||||||  |||||||| || ||||||||    
T  31499292 gcatacttttgaggtgtatgatttatatccgctgcgactgttaagaatttttatacatgcatgttattttggattttgaattgatgatatgacgtctatt 31499193  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||  |||||||| ||||||||||||| || |||||||||    
T  31499192 tcttgaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 31499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 9323082 - 9323341
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||| |||||| ||||||||||||  | |||||||||| |||||||||||||||||| | || ||||||| || ||||| ||||| ||||    
T  9323082 gattattctagattttttattgtggatttatttatgttgtggagattttcccatttgtcgggatttgaataatttttatgttgatgtattttgatctcat 9323181  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||| | || |||||||||||||||||||||||||||| | |||||||| |||  |  || ||| | | |||||||||| || ||||||    
T  9323182 ggcatgtatacttttgaggtgtatggtttatatccgctgcaactgttgataatttttatatatgtctcatgattttgttattgttgatgacgtagcgtct 9323281  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||| | |||||||  |||||||| |||||||||| ||||| |||||||||    
T  9323282 atttcttgaatattca-attattcgcgtgttttatcgctttaataaaaatagggcgttaca 9323341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 9609356 - 9609131
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg-atttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| ||||||||| |||||||||||||||| || ||||| ||  || |||||||||||||||||| || ||||||||||||||||||||    
T  9609356 tggagatttacccacttgtcgggacttggagaacttttatgttgatgtattttttatatcatggcatgtatgctttgaa-gtatatggtttatatccgct 9609258  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| || ||| ||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||| |   |||||| ||||||||| |    
T  9609257 gcgactgttgagatattt-atacatgcatgttgaatttggattttgtttgatgatgtcgcgtctatttcttgaatatatgctttattcgtgtgttttatc 9609159  T
Q  250 gctttaatagaaataaggcgttacacat 277  Q
    ||||||||||||||| | ||||||||||    
T  9609158 gctttaatagaaataggtcgttacacat 9609131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 9836928 - 9836703
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg-atttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| ||||||||| |||||||||||||||| || ||||| ||  || |||||||||||||||||| || ||||||||||||||||||||    
T  9836928 tggagatttacccacttgtcgggacttggagaacttttatgttgatgtattttttatatcatggcatgtatgctttgaa-gtatatggtttatatccgct 9836830  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| || ||| ||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||| |   |||||| ||||||||| |    
T  9836829 gcgactgttgagatattt-atacatgcatgttgaatttggattttgtttgatgatgtcgcgtctatttcttgaatatatgctttattcgtgtgttttatc 9836731  T
Q  250 gctttaatagaaataaggcgttacacat 277  Q
    ||||||||||||||| | ||||||||||    
T  9836730 gctttaatagaaataggtcgttacacat 9836703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 16915763 - 16915539
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg-atttcatggcatgtatgcttttaaagtatatggtttatat--ccg 149  Q
    ||||| ||| ||||||| |||||| ||||||||| |||||| || ||||| ||  || |||||||||||||| |||| |||||||||||||||||  |||    
T  16915763 tggaggtttacccatttatcgggacttggagaacatttatgttgatgtattttttatatcatggcatgtatg-ttttgaagtatatggtttatatatccg 16915665  T
Q  150 ctgcaactgttgaaattttttatacatgcatgttgttttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||  ||||| || ||||||||||||||||||| | ||||||||   ||||||||    
T  16915664 ctgcgactgttgagtttttttatacatgcatgttgttttggattttgtaagatgacgtagcgtctatttcttgaatatatgtattattcgcatgttttac 16915565  T
Q  249 cgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||| |||||||||    
T  16915564 cgctttaatagaaatagggcgttaca 16915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 14278935 - 14279186
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg-atttcatggcat 118  Q
    |||||||| | |||||||||||||||  ||||| |||||||| |||||||||||||| |||||||||||| ||| || ||||| ||  || |||||||||    
T  14278935 tctagattatctattttggatttatt--catgttggagatttacccatttgtcgggacttggagaacttt-atgttgatgtattttttatatcatggcat 14279031  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttga-tgatgtggcgtctattt 217  Q
    ||||| ||| || |||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||||||||||| | ||| || ||||||||||    
T  14279032 gtatggtttgaa-gtatatggtttatatccgctgcgactgttgagatttttg-tacatgcatgttgttttggattttgtttaatgacgtagcgtctattt 14279129  T
Q  218 cttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||| | ||||||||  |||||||| | |||||||||||||| | |||||||    
T  14279130 cttgaatatatgtattattcgcgtgttttatcactttaatagaaataggacgttaca 14279186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 5617599 - 5617345
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcat 118  Q
    |||||||| | | |||||||||||||  ||||| |||||||| |||||||||||||| |||||||||||||||| || ||||| || ||| ||||| |||    
T  5617599 tctagattatctgttttggatttatt--catgttggagatttacccatttgtcgggacttggagaacttttatgttgatgtatttttgatatcatgacat 5617502  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatt 216  Q
    ||||||||  || |||| ||||||||||||| ||| |||||||| |||||| || |||||||||||  |||| |||||||| |||||||| |||||||||    
T  5617501 gtatgcttcgaa-gtatttggtttatatccgttgcgactgttgagattttt-atgcatgcatgttgaatttgaattttgtttgatgatgtagcgtctatt 5617404  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||| ||||||||||    
T  5617403 tcttgaatatatgtattattagcgtgttttaccgctttaatagaaatagggcgttacac 5617345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 39294177 - 39294439
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttg-cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||| || |  ||||||||||||  | | |||||||  ||||| |||||| | ||| |||| || ||||||| ||||| ||||| ||||    
T  39294177 gattattctagattggttttgctggatttatttat-tattgagattttacccatatgtcggtacttgaagaatttatatgatgatgtattttgatctcat 39294275  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||  |  | |||| |||||||||||||| |||||||| | |||||||| |||||||||| ||||  |||| |||  || || ||||||    
T  39294276 ggcatgtatactttggatatgtatgatttatatccgctgcgactgttgagaatttttatatatgcatgttgatttgatttttattgtagacgtagcgtct 39294375  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacacat 277  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||    
T  39294376 atttcttgaatatttatattattcgtgtgttttatcgctttattagaaatagggcgttacacat 39294439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 274
Target Start/End: Original strand, 21677588 - 21677779
Alignment:
Q  80 ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgca 179  Q
    |||||| || ||||||| ||||| ||||| ||||||||||||| |||| |  || |||||||||||||||||||||||||||| | || ||||| ||||     
T  21677588 ggagaatttctatgatgatgtat-ttgatctcatggcatgtatactttgag-gtgtatggtttatatccgctgcaactgttgagaattcttatatatgcc 21677685  T
Q  180 tgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    || | ||| ||||||||||||||  |||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  21677686 tgatattt-ggattttgttgatggcgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 21677779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 279
Target Start/End: Original strand, 9058734 - 9058908
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatg 202  Q
    ||||| |||||||||||||| |||| |||||||||||||||||||| ||| |||||||| | |||| ||||||||||||||||||||||||||| ||| |    
T  9058734 ttgatatcatggcatgtatg-ttttgaagtatatggtttatatccgatgcgactgttgagaatttt-atacatgcatgttgttttggattttgtatgaag 9058831  T
Q  203 atgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacacatac 279  Q
    | || ||||||||||||| ||||| ||||||||||  |||||| | |||||||||||||||| ||||||||| ||||    
T  9058832 acgtagcgtctatttcttaaatatatatattattcgcgtgtttgatcgctttaatagaaatagggcgttacagatac 9058908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 78 - 274
Target Start/End: Complemental strand, 28388548 - 28388355
Alignment:
Q  78 ttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatg 177  Q
    |||||||| |||||||||| ||||| | ||| ||||||||||||| || || | || |||| |||||||||||||||||| |||| | |||||||| |||    
T  28388548 ttggagaa-ttttatgatgatgtat-tcgatctcatggcatgtatactcttgaggtgtatgatttatatccgctgcaactattgagaatttttatagatg 28388451  T
Q  178 catgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||| || |||||||||||||||| || ||||||||||||||||||||| |||||||||||  |||||||| |||||||||||||||| | |||||||    
T  28388450 catattattttggattttgttgaggacgtggcgtctatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaataggacgttaca 28388355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 34243172 - 34243423
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcat 118  Q
    |||||||| | | |||||||||||||  ||||| |||||||| |||||||||||||| |||||||||||  ||| || ||||| || ||| |||||||||    
T  34243172 tctagattatctgttttggatttatt--catgttggagatttacccatttgtcgggacttggagaactt--atgttgatgtatttttgatatcatggcat 34243267  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatt 216  Q
    || | |||| || |||||||||||||||| ||||| |||||||| |||||| ||||||||||||||  ||||||||||||| ||||| || |||||||||    
T  34243268 gtgtactttgaa-gtatatggtttatatctgctgcgactgttgagattttt-atacatgcatgttgaatttggattttgtttgatgacgtagcgtctatt 34243365  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||| |||| | ||||||||  |||||||| |||||||||||||||| || ||||||    
T  34243366 tcttgcatatatgtattattcgcgtgttttatcgctttaatagaaatagggtgttaca 34243423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 110 - 276
Target Start/End: Original strand, 20587739 - 20587905
Alignment:
Q  110 tcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggc 209  Q
    |||||| |||||| ||||| | || |||||||||||| || |||  ||||||| | ||||||||||||||||||||||||||||||||||| || |||      
T  20587739 tcatggtatgtatacttttgaggtgtatggtttatattcgttgcgtctgttgagaatttttatacatgcatgttgttttggattttgttgaagacgtgat 20587838  T
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||||||||||||||||| |||||||||  |||||||| |||||||||||||||| |||||| ||||    
T  20587839 gtctatttcttgaatattcatattattcgcgtgttttatcgctttaatagaaatagggcgttccaca 20587905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 14938855 - 14938598
Alignment:
Q  18 tattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggc 116  Q
    ||||||||||| | | || ||||||||||||  ||| ||||||||||||| |||| ||||||  ||||| ||||||  ||   ||| || || |||||||    
T  14938855 tattctagattatctgttgtggatttatttatgtgttggagatttgcccacttgttgggattcagagaatttttatattgagatatttttatatcatggc 14938756  T
Q  117 atgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatt 216  Q
    |||||| ||||| |  | |||| | | ||| |||||| |||||||  | |||||||||||||||||||||||| ||||||||||||| ||| |  |||||    
T  14938755 atgtatacttttgagatgtatgatctttattcgctgcgactgttgggaatttttatacatgcatgttgttttgaattttgttgatgacgtgactactatt 14938656  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| ||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  14938655 tcttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 14938598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 15366448 - 15366191
Alignment:
Q  18 tattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggc 116  Q
    ||||||||||| | | || ||||||||||||  ||| ||||||||||||| |||| ||||||  ||||| ||||||  ||   ||| || || |||||||    
T  15366448 tattctagattatctgttgtggatttatttatgtgttggagatttgcccacttgttgggattcagagaatttttatattgagatatttttatatcatggc 15366349  T
Q  117 atgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatt 216  Q
    |||||| ||||| |  | |||| | | ||| |||||| |||||||  | |||||||||||||||||||||||| ||||||||||||| ||| |  |||||    
T  15366348 atgtatacttttgagatgtatgatctttattcgctgcgactgttgggaatttttatacatgcatgttgttttgaattttgttgatgacgtgactactatt 15366249  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| ||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  15366248 tcttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 15366191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 18081378 - 18081583
Alignment:
Q  69 tgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatttt 168  Q
    ||||||||||||||||| || ||||||||||||| ||||| ||||||||||||  | |   |  | |||| | |||||||||||||||| |||| | |||    
T  18081378 tgtcgggatttggagaatttatatgatgttgtattttgatctcatggcatgtagacctaggagatgtatgatctatatccgctgcaactattgagaattt 18081477  T
Q  169 ttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggc 268  Q
    | ||| || |||||||||| ||||||||||||||| || | ||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||| |    
T  18081478 t-atatatacatgttgttt-ggattttgttgatgacgtagagtcaatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaataagac 18081575  T
Q  269 gttacaca 276  Q
    ||||||||    
T  18081576 gttacaca 18081583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 28718074 - 28717935
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||||||||||||| |||| |||||||| | |||||||| ||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||| |    
T  28718074 tatggtttatatccactgcgactgttgagaatttttataaatgcatgttgttttggattttgtcgataacatggcgtctatttcttgaatatttatatca 28717975  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  |||||||| |||||||||| ||||| |||||||||    
T  28717974 ttcgcgtgttttatcgctttaataaaaatatggcgttaca 28717935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 6912301 - 6912176
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  6912301 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 6912202  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  6912201 atggtgctagctatagatgcacatgc 6912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 47574279 - 47574154
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  47574279 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 47574180  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  47574179 atggtgctagctatagatgcacatgc 47574154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 274
Target Start/End: Complemental strand, 16381977 - 16381803
Alignment:
Q  98 tgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt 197  Q
    ||||| ||||| ||||||||||||| |||| || || |||||||||||||| |||||||||||||||  |||| || |||| |||||||| |||||||||    
T  16381977 tgtattttgatctcatggcatgtatactttgaa-gtgtatggtttatatccactgcaactgttgaaaaattttctatatgcctgttgttt-ggattttgt 16381880  T
Q  198 tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| | ||| | |||||||||| ||||||||||||||||  |||||||| |||||||||||||||| || ||||||    
T  16381879 tgataacgtgacatctatttcttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggtgttaca 16381803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 53 - 264
Target Start/End: Original strand, 16930024 - 16930236
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| ||||||| |||||| |||||||||||||||| || ||||| || ||| |||||||||||||||||| || ||||||||||||||| ||||    
T  16930024 tggagatttacccatttttcgggacttggagaacttttatgttgatgtatttttgatatcatggcatgtatgctttgaa-gtatatggtttatatacgct 16930122  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| | |||| || |||||||| ||  |||| |||||||| ||||| || ||||||||||||||||||| |   ||||||| | |||||| |    
T  16930123 gcgactgttgagagtttt-atgcatgcatgatgaatttgaattttgtttgatgacgtagcgtctatttcttgaatatatgctttattcacgagttttatc 16930221  T
Q  250 gctttaatagaaata 264  Q
    |||||||||||||||    
T  16930222 gctttaatagaaata 16930236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 53 - 264
Target Start/End: Original strand, 16935407 - 16935619
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| ||||||| |||||| |||||||||||||||| || ||||| || ||| |||||||||||||||||| || ||||||||||||||| ||||    
T  16935407 tggagatttacccatttttcgggacttggagaacttttatgttgatgtatttttgatatcatggcatgtatgctttgaa-gtatatggtttatatacgct 16935505  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| | |||| || |||||||| ||  |||| |||||||| ||||| || ||||||||||||||||||| |   ||||||| | |||||| |    
T  16935506 gcgactgttgagagtttt-atgcatgcatgatgaatttgaattttgtttgatgacgtagcgtctatttcttgaatatatgctttattcacgagttttatc 16935604  T
Q  250 gctttaatagaaata 264  Q
    |||||||||||||||    
T  16935605 gctttaatagaaata 16935619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 19034615 - 19034489
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  19034615 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 19034516  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  19034515 aatggtgttagctatagatgcacatgc 19034489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 20720021 - 20720147
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  20720021 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 20720120  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  20720121 aatggtgttagctatagatgcacatgc 20720147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 33230921 - 33230795
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  33230921 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 33230822  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||||||||| |||||||||||||    
T  33230821 aatggtgctagctgtagatgcacatgc 33230795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 34283064 - 34282938
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  34283064 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 34282965  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  34282964 aatggtgttagctatagatgcacatgc 34282938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 3794815 - 3794940
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | | ||||||| |||||| |||||||||||||||||    
T  3794815 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagatttgcaccaaatgttcgaagacatcaatgtcaa 3794914  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  3794915 atggtgctagctatagatgcacatgc 3794940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 20764683 - 20764808
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  20764683 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 20764782  T
Q  373 aatggtgctagctatagatgcacatg 398  Q
    ||||||| ||||||||||||||||||    
T  20764783 aatggtgttagctatagatgcacatg 20764808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 27736007 - 27735882
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| ||||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||| ||||||    
T  27736007 acatattgcatcactatttgaaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcattgtcaa 27735908  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  27735907 atggtgctagctataaatgcacatgc 27735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 47164517 - 47164392
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||| ||   || |||||| | ||||||||| ||||||||||||||||||||| ||    
T  47164517 acatactgcatcactatttgaaaaacaactaaactcaatcctaaccaggttgaatggtattatgagagttgcaccaaatgtttgaagacatcaatgttaa 47164418  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  47164417 atggtgctagctataaatgcacatgc 47164392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 274 - 397
Target Start/End: Original strand, 29490261 - 29490385
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  29490261 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 29490360  T
Q  373 aatggtgctagctatagatgcacat 397  Q
    ||||||| |||||||||||||||||    
T  29490361 aatggtgttagctatagatgcacat 29490385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 111 - 274
Target Start/End: Complemental strand, 33555728 - 33555565
Alignment:
Q  111 catggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtgg 208  Q
    |||||||||||| ||||| | || ||||||||||| ||||||| |||||||| | |||||||| |||| ||||||||| |||||||  | ||||| ||||    
T  33555728 catggcatgtatacttttgaggtgtatggtttatacccgctgcgactgttgagagtttttatatatgcctgttgtttt-gattttgaatcgatgacgtgg 33555630  T
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     ||||||||||||||||||||||||||||  || ||||| ||| ||||||||||||||||||||||    
T  33555629 tgtctatttcttgaatatttatattattcgcgttttttatcgc-ttaatagaaataaggcgttaca 33555565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 9148666 - 9148791
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||| ||||||    
T  9148666 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcattgtcaa 9148765  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||||||||||||||    
T  9148766 atggtgttagctatagatgcacatgc 9148791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 33030113 - 33030238
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  33030113 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 33030212  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| ||||||||| ||||||||||    
T  33030213 atggtactagctatatatgcacatgc 33030238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 4444425 - 4444176
Alignment:
Q  23 tagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtat 122  Q
    ||||| |||||| ||||||||||||    |||||||||| ||| || ||||||||||| |||| ||| |||||||||| |  |||| | |||||||||||    
T  4444425 tagatagtttatcttggatttattt----gtggagatttacccctt-gtcgggatttgaagaattttcatgatgttgttttatgatattatggcatgtat 4444331  T
Q  123 gcttttaaagtatatggtttatatccgctgcaactgttgaaattt----tttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttc 218  Q
      || | | || ||| ||||||||| |||||||||||||| | ||    |||||| |||| || ||||| | ||||||||| ||| || |||||||||||    
T  4444330 atttgtgaggtgtatcgtttatatctgctgcaactgttgagaattattatttatatatgcttgctgttt-gaattttgttgttgacgtagcgtctatttc 4444232  T
Q  219 ttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||  |||||| | | |||||||||||||| |||||||||    
T  4444231 ttgaatatttatattattcgcgtgtttaatctctttaatagaaatagggcgttaca 4444176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 23767397 - 23767272
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  23767397 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 23767298  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  23767297 atggtgctagctatatatgcacatgc 23767272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 42686874 - 42686999
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||||||||| ||| ||||||  |  |||||| | ||||||||| |||||| ||||||||||| |||||    
T  42686874 acatactgcatcactatttggaaaacaactaaattcaatccaaacaagtttagattgtattatgagagttgcaccaaatgttcgaagacatcaacgtcaa 42686973  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  42686974 atggtgctagctatatatgcacatgc 42686999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 17923087 - 17922881
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| |||| |||||||||||| || ||||||| ||||| ||||| ||||| ||||||| ||||  |  | |||| |||||||||||||| ||||||||    
T  17923087 cccatatgtcaggatttggagaatttatatgatgatgtattttgatctcatgacatgtatactttagagatgtatgatttatatccgctgcgactgttga 17922988  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatga---tgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatag 259  Q
    || ||||||||||||||||||||||||| |||| |||| ||     |  |||||||||||||||||  ||  ||||||| |||||||| ||||||||| |    
T  17922987 aaatttttatacatgcatgttgttttggtttttattgaagacataataacgtctatttcttgaataaatactttattcacgtgttttatcgctttaattg 17922888  T
Q  260 aaataag 266  Q
    | |||||    
T  17922887 agataag 17922881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 51 - 274
Target Start/End: Complemental strand, 4437000 - 4436775
Alignment:
Q  51 tgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgc 150  Q
    ||||||||||| ||| ||||||||||||||||||| ||| |||||||| | |  |||| | |||||||||||  || | | || ||||||||||||| |     
T  4437000 tgtggagatttaccc-tttgtcgggatttggagaattttcatgatgttattttatgatcttatggcatgtatatttgtgaggtgtatggtttatatctgt 4436902  T
Q  151 tgcaactgttgaaattt----tttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgtttt 246  Q
    |||||||||||| | ||    |||||| |||| |||||||| | ||||||||| ||| || |||||||||||||||||||||||| |||||  ||||||     
T  4436901 tgcaactgttgagaattattatttatatatgcttgttgttt-gaattttgttgttgacgtagcgtctatttcttgaatatttatactattcgcgtgttta 4436803  T
Q  247 accgctttaatagaaataaggcgttaca 274  Q
    | |||||||||| ||||| || ||||||    
T  4436802 atcgctttaataaaaatagggtgttaca 4436775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 8926849 - 8926724
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  8926849 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 8926750  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||||||||||    
T  8926749 atggtgctggctataaatgcacatgc 8926724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 9227179 - 9227054
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||| | |||||||||||| ||||||||||   |  |||||| | ||||||| | |||||| |||||||||||||||||    
T  9227179 acatactgcatcactatttggaaaataactaaattcaatcataaccagtttggatagtattatgagagttgcatcaaatgttcgaagacatcaatgtcaa 9227080  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||| ||||    
T  9227079 atggtgctagctatagatgcatatgc 9227054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 274
Target Start/End: Original strand, 10862992 - 10863203
Alignment:
Q  65 catttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatat-ggtttatatccgctgcaactgttga 162  Q
    |||||||||||| |||||| | ||| |||||  ||||| || ||| |||||||||||||||||  || |||| | |||||||||||||||||||||||||    
T  10862992 catttgtcgggacttggaggattttcatgattatgtatttttgatatcatggcatgtatgcttcgaa-gtattttggtttatatccgctgcaactgttga 10863090  T
Q  163 aattttttatacatgcatgttgttttgg-attttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaataga 260  Q
     | ||||||| |||||||||||  |||| ||||||| |||||| || ||||||||||||||||||  |   ||||||  | |||||||| ||||||||||    
T  10863091 ga-tttttatgcatgcatgttgaattggaattttgtatgatgacgtagcgtctatttcttgaataaattccttattcgcgagttttaccactttaataga 10863189  T
Q  261 aataaggcgttaca 274  Q
    ||||||||||||||    
T  10863190 aataaggcgttaca 10863203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 19520479 - 19520604
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| || ||||| ||||||||    
T  19520479 acatactgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgaaagttgcaccaaatgttcgatgacataaatgtcaa 19520578  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  19520579 atggtgctagctatatatgcacatgc 19520604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 39649898 - 39649773
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||||| |||||| | ||| ||||||||||||||| ||||||||||   | ||||||| | |||| |||| |||||| |||||||||| ||||||    
T  39649898 acatattgcatgactatttggaaagcagctaaattcaatcttaaccagtttggataatattatgagagtttcaccaaatgttcgaagacatcattgtcaa 39649799  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  39649798 atggtgctagctatagatgcacatgc 39649773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 399
Target Start/End: Original strand, 5962006 - 5962129
Alignment:
Q  276 atactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaat 375  Q
    |||||||||||||||| | |||| | |||||||||||||||||||||||   |  |||||| | ||||||||  |||||| |||| ||||||||||||||    
T  5962006 atactgcatcactatttggaaaataactaaattcaatcctaaccagtttggattgtattatgaaagttgcactaaatgttcgaagccatcaatgtcaaat 5962105  T
Q  376 ggtgctagctatagatgcacatgc 399  Q
    ||||||||||||| ||||||||||    
T  5962106 ggtgctagctatatatgcacatgc 5962129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 305 - 399
Target Start/End: Complemental strand, 23300636 - 23300542
Alignment:
Q  305 aattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagctatagatgcacatgc 399  Q
    ||||||||| |||||||||||  ||||||||| | ||||||||  |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  23300636 aattcaatcataaccagtttagatgatattatgagagttgcactaaatgttggaagacatcaatgtcaaatggtgctagctataaatgcacatgc 23300542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 47173792 - 47173917
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttg-aagacatcaatgtca 372  Q
    ||||| |||||||||||| |  ||||| ||||||||||||||||||| |||   ||||||||| | ||||||||| |||||| | |||||||||||||||    
T  47173792 acatagtgcatcactatttggtaaacaactaaattcaatcctaaccaatttggatgatattatgagagttgcaccaaatgttcgaaagacatcaatgtca 47173891  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    || ||||||||||||||||||||||||    
T  47173892 aa-ggtgctagctatagatgcacatgc 47173917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 33639633 - 33639508
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| ||||| || ||||||||||||||||| |||||   ||  ||||| | ||||||| | |||  | |||||||||||||||||    
T  33639633 acatattgcatcactatttgaaaagcaactaaattcaatcctaactagtttggatggcattatgagagttgcatcaaataatcgaagacatcaatgtcaa 33639534  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  33639533 atggtgctagctatagatgcacatgc 33639508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 17481652 - 17481775
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||| || |||||| |||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  17481652 acatactgcatcactatttggaaaacaactaaattaaa-cctaactagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 17481750  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    ||||||||||||||| |||||||||    
T  17481751 atggtgctagctatatatgcacatg 17481775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 398
Target Start/End: Complemental strand, 17571562 - 17571439
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||| || |||||| |||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  17571562 acatactgcatcactatttggaaaacaactaaattaaa-cctaactagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 17571464  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    ||||||||||||||| |||||||||    
T  17571463 atggtgctagctatatatgcacatg 17571439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 274
Target Start/End: Original strand, 3194163 - 3194303
Alignment:
Q  133 tatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggat-tttgttgatgatgtggcgtctatttcttgaatatttata 231  Q
    |||||| |||||||| | ||| |||||||| | |||||||| |||||||||||||  ||| ||||||||  | || |||||||||| |||||||||| ||    
T  3194163 tatatgatttatatctggtgcgactgttgagaatttttataaatgcatgttgttt--gatatttgttgaaaacgtagcgtctattttttgaatatttgta 3194260  T
Q  232 ttattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||  |||||||| |||||||||||||||| |||||||||    
T  3194261 ttattcgcgtgttttatcgctttaatagaaatagggcgttaca 3194303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 274
Target Start/End: Original strand, 18921163 - 18921337
Alignment:
Q  87 ttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgtt 186  Q
    ||||||| || ||||| ||||| ||||| |||||||  |||| | || ||||||||||||||||||| |||||||| | |||||||||||||||||||||    
T  18921163 ttttatgttgatgtat-ttgatctcatgacatgtataattttgaggtgtatggtttatatccgctgcgactgttgagaatttttatacatgcatgttgtt 18921261  T
Q  187 ttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     |            ||  |||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||| | |||||||    
T  18921262 gt------------tggcgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaataaaaataggacgttaca 18921337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 14308235 - 14308360
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| ||||| |||||||||||    
T  14308235 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagatatcaatgtcaa 14308334  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| || |||||||    
T  14308335 atggtgctggctatatatacacatgc 14308360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 31898737 - 31898612
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| ||||||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  31898737 acatattgcatcaccatttggaaagcagctaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 31898638  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  31898637 atggtgctagctatagatgcacatgc 31898612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 17477206 - 17477329
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||| || |||||| |||||   |  |||||| | ||||| ||| |||||| |||||||||||||||||    
T  17477206 acatactgcatcactatttggaaaacaactaaattaaa-cctaactagtttggattgtattatgagagttgtaccaaatgttcgaagacatcaatgtcaa 17477304  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    ||||||||||||||| |||||||||    
T  17477305 atggtgctagctatatatgcacatg 17477329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 274 - 398
Target Start/End: Complemental strand, 17576008 - 17575885
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||| || |||||| |||||   |  |||||| | ||||| ||| |||||| |||||||||||||||||    
T  17576008 acatactgcatcactatttggaaaacaactaaattaaa-cctaactagtttggattgtattatgagagttgtaccaaatgttcgaagacatcaatgtcaa 17575910  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    ||||||||||||||| |||||||||    
T  17575909 atggtgctagctatatatgcacatg 17575885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 270
Target Start/End: Complemental strand, 12245796 - 12245586
Alignment:
Q  59 tttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactg 158  Q
    ||||||||| ||||||||||||||||  || ||||||| ||||| ||||| | ||| |||||||  |||  |  | |||| |||||||||||||| ||||    
T  12245796 tttgcccatatgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatattttggagatgtatgatttatatccgctgcgactg 12245697  T
Q  159 ttgaaattttttatacatgcatgttgttttggat-tttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaat 257  Q
    |||| |  ||||||| |||||||||||||  ||| |||||||| || ||  ||||||||| |||||||  | | ||||||  ||||||||  ||||||||    
T  12245696 ttgagaaattttatatatgcatgttgttt--gatatttgttgaagacgtaacgtctatttattgaataaatgttttattcgcgtgttttattgctttaat 12245599  T
Q  258 agaaataaggcgt 270  Q
    ||||||| |||||    
T  12245598 agaaatagggcgt 12245586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 17170364 - 17170489
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  17170364 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 17170463  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  17170464 atggtgctagctatagatgcacatgc 17170489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 42917155 - 42917280
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||  |||  |||||   ||||||||| | ||||||||| |||||| |||||||| ||||||||    
T  42917155 acatattgcatcactatttggaaagcaactaaattcaattataattagtttggatgatattatgagagttgcaccaaatgttcgaagacattaatgtcaa 42917254  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||| ||||||| ||||||||    
T  42917255 atggtgctacctatagacgcacatgc 42917280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 48528707 - 48528582
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||| ||||| ||||   | ||||||  | |||| |||| |||||| ||||||||||  |||||    
T  48528707 acatattgcatcactatttggaaagcaactaaattcaatcttaacctgtttggataatattacgagagtttcaccaaatgttcgaagacatcatcgtcaa 48528608  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  48528607 atggtgctagctatagatgcacatgc 48528582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 12182194 - 12182130
Alignment:
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| | |||||||    
T  12182194 gtctatttcttgaatatttgtattattcgtgtgttttatcgctttaatagaaataggacgttaca 12182130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 17230167 - 17230391
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg-atttcatggcatgtatgcttttaaagtatatggtttatatc--cg 149  Q
    ||||| ||| ||| |||| ||||| ||||||||| |||||| || ||||| ||  || ||||| ||||||| | ||  |||||| ||||||||||   ||    
T  17230167 tggagtttttcccttttgccgggacttggagaacatttatgttgatgtattttttatatcatgacatgtat-cgttcgaagtatttggtttatatattcg 17230265  T
Q  150 ctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgtttta 247  Q
    |||| |||||||| |||||| || |||||||| ||  |||| ||||||| |||||| || ||||||||||||||||||| |   ||||||   |||||||    
T  17230266 ctgcgactgttgagattttt-atgcatgcatgatgaatttgaattttgtatgatgacgtagcgtctatttcttgaatatatgctttattcgcatgtttta 17230364  T
Q  248 ccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||| |||||||||    
T  17230365 ccgctttaatagaaatatggcgttaca 17230391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 14303063 - 14303128
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||||||| || |||||||||    
T  14303063 cgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgttaca 14303128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 18366200 - 18366299
Alignment:
Q  174 catgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttac 273  Q
    ||||||||||||||  | |||| |||| || ||| |||||||||||||||||||| ||||||||  |||||||| |||||| |||||| || ||||||||    
T  18366200 catgcatgttgtttgag-ttttattgaagacgtgacgtctatttcttgaatatttgtattattcgcgtgttttatcgctttgatagaagtagggcgttac 18366298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 17926929 - 17926799
Alignment:
Q  58 atttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaact 157  Q
    |||| ||||| ||||||||||  ||||| || ||||||  ||||| ||||| ||||| ||| ||| ||||  |  | |||| | |||||| ||||| |||    
T  17926929 atttacccatatgtcgggattcagagaatttatatgataatgtattttgatctcatgacatatatactttagagatgtatgatgtatatctgctgcgact 17926830  T
Q  158 gttgaaattttttatacatgcatgttgtttt 188  Q
    |||||||||||||||||||||||||| ||||    
T  17926829 gttgaaattttttatacatgcatgttttttt 17926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 19380917 - 19380851
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||||||||||| ||||||||   ||||||| ||||||||||||| || ||||||||||    
T  19380917 cgtctatttcttgaatatttgtattattcgcatgttttatcgctttaatagaagtagggcgttacac 19380851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 15953758 - 15953890
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttgga-ttttgt-tgatgatgtggcgtctatttcttgaatatttatattattcat 239  Q
    |||||||||||| |||||||| |||||| || |||| |||| |  || || |||||| |||||| || ||||||||||||||||||| |   |||||| |    
T  15953758 tatatccgctgcgactgttgagattttt-atgcatggatgtcgaattagaattttgtatgatgacgtagcgtctatttcttgaatatatgctttattcgt 15953856  T
Q  240 gtgttttaccgctttaatagaaataaggcgttac 273  Q
    | |||||| ||||||||||||||||||| |||||    
T  15953857 gagttttatcgctttaatagaaataaggtgttac 15953890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 16206004 - 16205940
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||||||||| ||||||||| |||||||| ||||| ||||||| || |||| |||||    
T  16206004 tctatttcttgaatatttgtattattcacgtgttttatcgcttcaatagaagtagggcggtacac 16205940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 274
Target Start/End: Original strand, 16651365 - 16651500
Alignment:
Q  140 tttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttg-ttgatgatgtggcgtctatttcttgaatatttatattattc 237  Q
    |||||||||||||| |||||||| | ||||||| |||||||||||  |||| |||||| ||||||| || | ||||||||||||||||  ||| ||||||    
T  16651365 tttatatccgctgcgactgttgaga-tttttatgcatgcatgttgaatttgaattttgtttgatgacgtagggtctatttcttgaataaatattttattc 16651463  T
Q  238 atgtgttttaccgctttaatagaaataaggcgttaca 274  Q
      |||||||| |  ||||||| ||||| || ||||||    
T  16651464 gcgtgttttatcattttaatataaatagggtgttaca 16651500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 274
Target Start/End: Original strand, 17625725 - 17625860
Alignment:
Q  140 tttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttg-ttgatgatgtggcgtctatttcttgaatatttatattattc 237  Q
    |||||||||||||| |||||||| | ||||||| |||||||||||  |||| |||||| ||||||| || | ||||||||||||||||  ||| ||||||    
T  17625725 tttatatccgctgcgactgttgaga-tttttatgcatgcatgttgaatttgaattttgtttgatgacgtagggtctatttcttgaataaatattttattc 17625823  T
Q  238 atgtgttttaccgctttaatagaaataaggcgttaca 274  Q
      |||||||| |  ||||||| ||||| || ||||||    
T  17625824 gcgtgttttatcattttaatataaatagggtgttaca 17625860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 3135120 - 3135053
Alignment:
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacacat 277  Q
    |||||||||||||||| || ||||||||  |||||||| |||||||||| || || ||||||||||||    
T  3135120 gtctatttcttgaataattgtattattcgcgtgttttatcgctttaataaaagtagggcgttacacat 3135053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 15980657 - 15980795
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| |||||||||||||| |||||||| |  ||||||| ||||||||| ||   | ||||||| | || || ||||||||||||||||||  |   |||    
T  15980657 tatgatttatatccgctgcgactgttgagaaattttatatatgcatgtttttgatg-ttttgttcaagacgtagcgtctatttcttgaataaatgcttta 15980755  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  |||| ||| |||||||||||||||| |||||||||    
T  15980756 ttcgcgtgtattatcgctttaatagaaatagggcgttaca 15980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 16370581 - 16370646
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||  || ||||||||| || ||||| ||||||||||| |||| |||||||||    
T  16370581 cgtctatttcttgaatgattgtattattcacgtattttatcgctttaataggaatagggcgttaca 16370646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 13460397 - 13460346
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgtt 186  Q
    |||| |||||||||||||| |||||||| | |||||||| ||||||||||||    
T  13460397 tatgatttatatccgctgcgactgttgagaatttttataaatgcatgttgtt 13460346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 25122132 - 25122070
Alignment:
Q  212 ctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||  |||||||||  |||||||  | ||||||||||||| |||||||||    
T  25122132 ctatttcttgaatattattattattcacatgttttattgatttaatagaaatagggcgttaca 25122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 15305400 - 15305335
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||| |||||||||   ||||||  |||||||| ||||||||||||| || |||||||||    
T  15305400 cgtctatttcatgaatatttgatttattcgcgtgttttatcgctttaatagaagtagggcgttaca 15305335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 33558013 - 33557949
Alignment:
Q  51 tgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatgg 115  Q
    ||||||||||| ||||  ||||||||||||||||| ||||||| || | ||| ||||| ||||||    
T  33558013 tgtggagatttacccaaatgtcgggatttggagaatttttatgttgatatattttgatctcatgg 33557949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 4e-88; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 7468448 - 7468220
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7468448 gattattctagattgtttattttggatttatttacattgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 7468349  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||| |||| | |||||||||||||||||||||||||| | |||||||  |||  ||||| |||||||||||||||||| ||||||| |    
T  7468348 ggcatgtattcttttgaagtgtgtggtttatatccgctgcaactgttgagaatttttat--atgtctgttg-tttggattttgttgatgacgtggcgtat 7468252  T
Q  214 atttcttgaatatttatattattcatgtgttt 245  Q
    ||||||||||||||||||||||||||||||||    
T  7468251 atttcttgaatatttatattattcatgtgttt 7468220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 20707937 - 20707678
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||||||||| |||||||||||||  | |||||||| | |||||||||||||||||| |||| |||||||||||||||| ||||| | ||    
T  20707937 gattattctagattgtttatcttggatttatttatgttgtggagatctacccatttgtcgggatttgaagaatttttatgatgttgtattttgatcttat 20707838  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| ||||| | || |||||||| |||| |||||||||||||| | |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20707837 gtcatgtatacttttgaggtgtatggtttctatctgctgcaactgttgagaatttttatatatgcatgttgttt-ggattttgttgatgatgtggcgtct 20707739  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||| |||||||||    
T  20707738 atttcttgaatatttgtattattcacgtgttttatcgctttaatagaaatagggcgttaca 20707678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 22499329 - 22499588
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||    
T  22499329 gattattctagattgtttattctggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttttatgatattgtattttgatctcat 22499428  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||  ||||  |  | |||| | ||||||||||||||||||||| | |||||||| |||| |||||||| ||||||||||||||| || ||||||    
T  22499429 ggcatgtagactttggagatgtatgatctatatccgctgcaactgttgagaatttttatatatgcctgttgttt-ggattttgttgatgacgtagcgtct 22499527  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||    
T  22499528 atttcttgaatatttatattattcacgtgttttatcgctttaatagaaatagggcgttaca 22499588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 33170400 - 33170141
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | ||||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  33170400 gattattctagattgtttattctggatttatttatgttgtggagatttgtccatttgtcgggatttggagaa-ttttatgatgatgtattttgatctcat 33170302  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| ||||| | || |||| |||||||| ||||||||| |||| |||||||||| |||| || || ||| | | |||||||||| |||||||||    
T  33170301 gacatgtatacttttgaggtgtatgatttatatctgctgcaactattgagattttttatatatgcctgatgatttcgttattgttgatgacgtggcgtct 33170202  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||  |||||||| |||||||||| ||||| |||||||||    
T  33170201 atttcttgaatatttatattattcgcgtgttttatcgctttaataaaaatagggcgttaca 33170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 18043176 - 18043433
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||||||| || ||||||||||||  | |||||||||||| |||||||||||||||||||||  ||||||||| ||||| ||||  ||||    
T  18043176 gattattctagattgtttgttctggatttatttatgttgtggagatttgctcatttgtcgggatttggagaatctttatgatgatgtattttgacctcat 18043275  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||| | || |||| ||||||||  ||||||||||||| | |||||||| |||| ||||| |||||| |||||||||||||||||||||    
T  18043276 ggcatgtatacttttgaggtgtatgatttatatcttctgcaactgttgagaatttttatatatgcctgttg-tttggaatttgttgatgatgtggcgtct 18043374  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||||||||  |||||||    
T  18043375 atttcttgaatatttgtattattcgcgtgttttatcgctttaatagaaattgggcgtta 18043433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 15 - 264
Target Start/End: Original strand, 23118865 - 23119114
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||    
T  23118865 gattattctagattgtttattctggatttatttatgttgtggagatttgcccatttgtcgggatttggataatttttatgatgttgtattttgatctcat 23118964  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| |||| |  || |||| |||||||||||||| |||||||| | |||||||| |||||| ||| ||||| |||||||||| |  | ||||||    
T  23118965 ggcatgtatactttgag-gtgtatgatttatatccgctgcgactgttgagaatttttatatatgcatattgatttggtttttgttgatcacatagcgtct 23119063  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
     |||||||||||||| ||||||||  |||||||| ||||||||||||||||    
T  23119064 gtttcttgaatatttttattattcgcgtgttttatcgctttaatagaaata 23119114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 23216804 - 23216547
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | ||  |||||||||||||||||||||  ||||||| |||||||||| ||||| ||||| ||||    
T  23216804 gattattctagattgtttattctggatttatttatgttgtatagatttgcccatttgtcgggaaatggagaatttttatgatgatgtattttgatctcat 23216705  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| | ||| | || ||||||||||||| |||||||||||||| | |||||||| |||||||||| |||||| |||||||| || ||  |||||    
T  23216704 ggcatgtatac-tttgaggtgtatggtttatatcagctgcaactgttgagaatttttatatatgcatgttg-tttgga-tttgttgaagacgtaacgtct 23216608  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||  |||||||| || ||||||||||||| | |||||||    
T  23216607 atttcttgaatatttatattattcgcgtgttttatcgttttaatagaaatatgacgttaca 23216547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 24266144 - 24265885
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||| | | || ||||||||||    | ||||||||| |||| |||||| ||||| |||||| ||| |||||| ||||| ||||  ||||    
T  24266144 gattattctagattatctgttgtggatttattatgttttggagatttacccagttgtcgagatttcggagaattttgatgatgatgtatgttgacatcat 24266045  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
     ||||||||| |||| || ||||| |||||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  24266044 agcatgtatgtttttgaattatattgtttatatccgctgcaactgttgagaatttt-atacatgcatgttgttttgaattttgttgatgacgtggcgtct 24265946  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||  |||||||| | ||| |||| ||||| |||||||||    
T  24265945 atttcttgaatatttatattattcgcgtgttttatcacttaaataaaaatagggcgttaca 24265885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 17264646 - 17264388
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||| ||||| ||||||||||||  | |||||||||||||||||||||||||||||||||| || ||||||| ||||| ||||| ||||    
T  17264646 gattattctagattgattattctggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttatatgatgatgtattttgatctcat 17264547  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga--aattttttatacatgcatgttgttttggattttgttgatgatgtggcgt 211  Q
    ||||||||| ||||  |  | |||| |||||||||||||| ||||||||  | |||| ||| ||||||||    ||||| ||||||||| || || | ||    
T  17264546 ggcatgtatactttggagatgtatgatttatatccgctgcgactgttgaggatttttatatgcatgcatg----tttggtttttgttgaagacgtagtgt 17264451  T
Q  212 ctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||| |||||    
T  17264450 ctatttcttgaatatttattttattcgtgtgttttatcgctttaatagaaatagggcattaca 17264388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 24554599 - 24554859
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||| ||| | ||||||||||  | |||||||||| |||| ||||||| |||  ||||| || ||||||| ||||| ||||| ||||    
T  24554599 gattattctagattgttaattatagatttatttatgttgtggagatttacccaattgtcggaattcagagaatttatatgatgatgtattttgatctcat 24554698  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||  |  | |||| |||||||||||||| |||||||| | |||||||| || |  ||||||| |  |||||||||||| |||||||||    
T  24554699 ggcatgtatactttggagatgtatgatttatatccgctgcgactgttgataatttttatatatacccgttgtttggatttttgttgatgacgtggcgtct 24554798  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| ||| |||||||||    
T  24554799 atttcttgaatatttatattattcgcgtgttttatcgctttaatagagatagggcgttaca 24554859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 15931467 - 15931212
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcat 118  Q
    |||||||| | | |||||||||||||  ||||| |||| ||| |||||||||||||| | |||| ||||||||| || | || | ||||| |||||||||    
T  15931467 tctagattatctgttttggatttatt--catgttggagttttacccatttgtcgggactgggagtacttttatgttgatatacttttgatatcatggcat 15931370  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgtttt-ggattttgt-tgatgatgtggcgtctatt 216  Q
    ||||||||| || |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||||| || |||||||||    
T  15931369 gtatgctttgaa-gtatatggtttatatccgctgcgactgttgagaatttttatacatgcatgttgttttgggattttgtatgatgacgtagcgtctatt 15931271  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||| | ||||||||  ||||||||  ||||||||| ||||| ||||||||||    
T  15931270 tcttgaatatatgtattattcgcgtgttttattgctttaataaaaatagggcgttacac 15931212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 21 - 274
Target Start/End: Complemental strand, 29296021 - 29295769
Alignment:
Q  21 tctagattgtttattttggatttatttacatgtggagatttgcccattt-gtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatg 119  Q
    |||||||| | | ||||||||||||| |  | || |||||| ||||||| ||||| | ||||||||||||||||||  ||||| ||||| ||||| ||||    
T  29296021 tctagattatctgttttggatttattcatgtttgaagatttacccattttgtcggaacttggagaacttttatgattatgtat-ttgatatcatgacatg 29295923  T
Q  120 tatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctattt 217  Q
    ||| |||| || |||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||  ||||||| ||| |||||||||    
T  29295922 tatactttgaa-gtatatggtttatatccgctgcgactgttgagatttt--atacatgcatgttgttttggattttggtttgatgacgtgacgtctattt 29295826  T
Q  218 cttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||| |   |||||| ||||||||| |||||||||||||||| |||||||||    
T  29295825 cttgaatatatgccttattcgtgtgttttatcgctttaatagaaatagggcgttaca 29295769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 5851643 - 5851389
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcat 118  Q
    |||||||| | | |||||||||||||  ||||| ||| |||| |||||||||||| | |||||||||||||||| || |||| | ||||| ||||| |||    
T  5851643 tctagattatctgttttggatttatt--catgttggatatttacccatttgtcggaacttggagaacttttatgttgatgtacttttgatatcatgacat 5851546  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatttttt-atacatgcatgttgttttggattttgtt-gatgatgtggcgtctatt 216  Q
    ||||| ||   |||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||  ||||| || | |||||||    
T  5851545 gtatggttg--aagtatatggtttatatccgctgcgactgttgagatttttttatacatgcatgttgttttggattttgtaagatgacgtagtgtctatt 5851448  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||| | ||||||||  |||||||| |||||||||||||||| || |||||||    
T  5851447 tcttgaatatatgtattattcgcgtgttttatcgctttaatagaaatagggtgttacac 5851389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 274
Target Start/End: Complemental strand, 26009574 - 26009321
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcat 118  Q
    |||||||| | | |||||||||||||  ||||| |||||||| |||||||||||||| |||||||| ||||||| || |||| | ||||| |||||||||    
T  26009574 tctagattatctgttttggatttatt--catgttggagatttacccatttgtcgggacttggagaaattttatgttgatgtagttttgatatcatggcat 26009477  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatt 216  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||  ||||||||||||| ||||| || | |||||||    
T  26009476 gtatg-ttttgaagtatatggtttatatccgctgctactgttgag-ttttttatacacgcatgttgaatttggattttgtttgatgacgtagtgtctatt 26009379  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||| | | ||||||  |||||||| |||||||||| ||||| |||||||||    
T  26009378 tcttgaatatatgttttattcgcgtgttttatcgctttaatataaatagggcgttaca 26009321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 149 - 278
Target Start/End: Original strand, 27233352 - 27233481
Alignment:
Q  149 gctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    ||||| |||||||| | |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  27233352 gctgcgactgttgagaatttttatgtatgcatgttgttttggattttgttgatgatgtgacgtctatttcttgaatatttatattattcgcgtgttttac 27233451  T
Q  249 cgctttaatagaaataaggcgttacacata 278  Q
    |||||||||||||||| |||||||||||||    
T  27233452 cgctttaatagaaatagggcgttacacata 27233481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 274
Target Start/End: Complemental strand, 17500004 - 17499747
Alignment:
Q  17 ttattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatgg 115  Q
    |||||||||||| |||||| || | |||||||| | |||||||||| ||||||||| |||||| |||||| || ||||||| ||||| |||||| |||||    
T  17500004 ttattctagattatttattctg-acttatttacgttgtggagatttacccatttgttgggattcggagaatttatatgatgatgtattttgattgcatgg 17499906  T
Q  116 catgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctat 215  Q
    |||||||  |||  |  | |||| |||||||||||||| |||||||| |  ||||||| || ||||||| ||| | ||||||||| || ||  |||||||    
T  17499905 catgtatattttggagatgtatgatttatatccgctgcgactgttgagaaattttatatattcatgttgatttagtttttgttgaagacgtaacgtctat 17499806  T
Q  216 ttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||| || |||||||||    
T  17499805 ttcttgaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 17499747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 276
Target Start/End: Original strand, 18263518 - 18263689
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatga 203  Q
    ||||| ||||| ||||||| ||||| | || ||||||||||||||||||| |||||||| | |||| ||||||| |||||||||||||||||||||||||    
T  18263518 ttgatatcatgacatgtatacttttgaggtgtatggtttatatccgctgcgactgttgagaatttt-atacatggatgttgttttggattttgttgatga 18263616  T
Q  204 tgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
     ||| |||||||||||||||| ||||||||||||  ||||||||  ||||| ||||||||| |||||||||||    
T  18263617 cgtgacgtctatttcttgaatttttatattattcgcgtgttttattgctttgatagaaatagggcgttacaca 18263689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 45561730 - 45561952
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||| |||||||| | ||||||||||||  | |||||| |||||| |||||||||||||||||||| || ||||||| ||||| ||||| || |    
T  45561730 gattattctaaattgtttactgtggatttatttatgttgtggaggtttgccaatttgtcgggatttggagaatttatatgatgatgtattttgatctctt 45561829  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgt 211  Q
    ||||||||| || || | || |||| |||||||||| ||| |||||||| | |||| ||| | |||||||| ||||| |||||  |||||||||| ||||    
T  45561830 ggcatgtatactcttgaggtgtatgatttatatccgatgcgactgttgataattttaatatacgcatgttgatttggtttttgaattgatgatgtagcgt 45561929  T
Q  212 ctatttcttgaatatttatatta 234  Q
    |||||||||||||||||||||||    
T  45561930 ctatttcttgaatatttatatta 45561952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 37655741 - 37655930
Alignment:
Q  87 ttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgtt 186  Q
    |||||||||  ||||| || || |||||||||||||||||| || |||||||||||||||||||||| |||||||| | |||||||| ||||||||||||    
T  37655741 ttttatgattatgtattttaatatcatggcatgtatgctttgaa-gtatatggtttatatccgctgcgactgttgagaatttttatatatgcatgttgtt 37655839  T
Q  187 ttggattttg--ttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||| |||||  ||||||| || |||||||||| |||||||| |  ||||||| ||||||||| |||||||||||| ||| || |||||||    
T  37655840 ttggtttttgtattgatgacgtagcgtctattttttgaatatatgaattattcgtgtgttttatcgctttaatagagatagggtgttacac 37655930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 6301416 - 6301291
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  6301416 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 6301317  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  6301316 atggtgctagctatagatgcacatgc 6301291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 23967330 - 23967205
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  23967330 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 23967231  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  23967230 atggtgctagctatagatgcacatgc 23967205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 37029015 - 37029140
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  37029015 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 37029114  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  37029115 atggtgctagctatagatgcacatgc 37029140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 42061604 - 42061479
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  42061604 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 42061505  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  42061504 atggtgctagctatagatgcacatgc 42061479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 21234204 - 21234311
Alignment:
Q  167 ttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataag 266  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | |||||||||||||| |    
T  21234204 ttttatacatgcatgttattttggtttttgttgatgatgtggcgtctatttcttgaatatttatattattcgcgtgttttatcactttaatagaaatagg 21234303  T
Q  267 gcgttaca 274  Q
     |||||||    
T  21234304 acgttaca 21234311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 20663887 - 20663761
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  20663887 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 20663788  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  20663787 aatggtgttagctatagatgcacatgc 20663761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 30549250 - 30549124
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  30549250 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 30549151  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  30549150 aatggtgttagctatagatgcacatgc 30549124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 19247158 - 19247283
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| ||| ||||||||||||||||||||    
T  19247158 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatatttgaagacatcaatgtcaa 19247257  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||||||||||||||    
T  19247258 atggtgatagctatagatgcacatgc 19247283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 19320342 - 19320467
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| ||| ||||||||||||||||||||    
T  19320342 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatatttgaagacatcaatgtcaa 19320441  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||||||||||||||    
T  19320442 atggtgatagctatagatgcacatgc 19320467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 398
Target Start/End: Complemental strand, 44214003 - 44213878
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  44214003 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgatagttgcaccaaatgttcgaagacatcaatgtca 44213904  T
Q  373 aatggtgctagctatagatgcacatg 398  Q
    ||||||| ||||||||||||||||||    
T  44213903 aatggtgttagctatagatgcacatg 44213878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 51 - 276
Target Start/End: Complemental strand, 25608011 - 25607787
Alignment:
Q  51 tgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgc 150  Q
    |||| ||||||||||| |||||||||||||||||| |  ||||||| ||||| ||||| ||||||||||||| |||| | | | |||| |||||||||||    
T  25608011 tgtgaagatttgcccaattgtcgggatttggagaattgatatgatgatgtattttgatctcatggcatgtatactttgaga-tgtatgatttatatccgc 25607913  T
Q  151 tgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccg 250  Q
    ||| |||||||| |   |||||| ||||||||||||| |  | ||||||| || || || |||||||||||||||| | | ||||||   ||||||| ||    
T  25607912 tgcgactgttgagaaaatttatatatgcatgttgtttagattgttgttgaagaagtagcatctatttcttgaatatatgttttattcgcatgttttatcg 25607813  T
Q  251 ctttaatagaaataaggcgttacaca 276  Q
    ||||||||||| || || ||||||||    
T  25607812 ctttaatagaagtagggagttacaca 25607787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 33425200 - 33425075
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  33425200 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 33425101  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  33425100 atggtgctagctatatatgcacatgc 33425075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 41906904 - 41907029
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||| ||||||||||   || |||||| | ||||||||| ||| || |||||||||||||||||    
T  41906904 acatactgcatcactatttggaaaacaactaaattcaatcataaccagtttggatggtattatgagagttgcaccaaatattcgaagacatcaatgtcaa 41907003  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||||||||||||||    
T  41907004 atggtgctcgctatagatgcacatgc 41907029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 399
Target Start/End: Original strand, 44939627 - 44939744
Alignment:
Q  282 catcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgct 381  Q
    |||||||||| | |||||| |||||||||||| ||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||||||||||    
T  44939627 catcactatttggaaaacaactaaattcaatcataaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaaatggtgct 44939726  T
Q  382 agctatagatgcacatgc 399  Q
    ||||||||||||||||||    
T  44939727 agctatagatgcacatgc 44939744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 19334161 - 19334293
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgt 241  Q
    ||||||||||||  ||||||| | || ||||| ||||||||||||| |  |||||||||||| ||  |||||||||||||||||||||||||||||  ||    
T  19334161 tatatccgctgcggctgttgagaattcttatatatgcatgttgtttggatttttgttgatgacgtaacgtctatttcttgaatatttatattattcgcgt 19334260  T
Q  242 gttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||| |||||||||||||||| |||||||||    
T  19334261 gttttatcgctttaatagaaatagggcgttaca 19334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 400
Target Start/End: Original strand, 41155684 - 41155810
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||| |||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||| ||||||    
T  41155684 acatattgcttcactatttgtaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcattgtcaa 41155783  T
Q  374 atggtgctagctatagatgcacatgct 400  Q
    ||||||||||||||||||||| |||||    
T  41155784 atggtgctagctatagatgcatatgct 41155810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 14079772 - 14079647
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  14079772 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 14079673  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  14079672 atggtgctagctatatatgcacatgc 14079647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 41627947 - 41628072
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| |  |||||||| |||||| |||||||||||||||||    
T  41627947 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagtgttgcaccaaatgttcgaagacatcaatgtcaa 41628046  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  41628047 atggtgctagctatatatgcacatgc 41628072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 42811892 - 42811767
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||| |||   |  |||||  | ||||||||| |||||| |||||||||||||||||    
T  42811892 acatactgcatcactatttggaaaacaactaaattcaatcctaaccactttggattgtattacgagagttgcaccaaatgttcgaagacatcaatgtcaa 42811793  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  42811792 atggtgctagctatatatgcacatgc 42811767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 44383882 - 44383757
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||  | ||||| || |||||||||||| ||||||||||   ||||||| | | ||||||||| |||||| |||||||||||||||||    
T  44383882 acatattgcatcactgcttgaaaagcaactaaattcaatcataaccagtttggatgatattgtgagagttgcaccaaatgttcgaagacatcaatgtcaa 44383783  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  44383782 atggtgctagctatagatgcacatgc 44383757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 274 - 397
Target Start/End: Complemental strand, 22357387 - 22357264
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||||||||||||| |||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  22357387 acatactgcatcactatttggaaaacaactaaattcaatcctaactagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 22357288  T
Q  374 atggtgctagctatagatgcacat 397  Q
    ||||||||||||||| || |||||    
T  22357287 atggtgctagctatatatacacat 22357264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 274
Target Start/End: Original strand, 22725532 - 22725718
Alignment:
Q  87 ttttatgatgttgtatcttgatttcatggcatgtatgcttttaaag-tatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt 185  Q
    |||||||||| ||||| ||||| | ||| ||||||| |||||  || | |||| |||||||||||||| ||||||||    ||||||| |||||||||||    
T  22725532 ttttatgatgatgtatattgatcttatgacatgtat-cttttggagatgtatgatttatatccgctgcgactgttgaggaattttatatatgcatgttgt 22725630  T
Q  186 tttggat-tttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||  ||| |||||||| ||||| |||||||||||||||||||||  |||||||| |||||||| |||||||||||||||| | |||||||    
T  22725631 tt--gatatttgttgaagatgtagcgtctatttcttgaatatttggattattcacgtgttttatcgctttaatagaaataggacgttaca 22725718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 24237055 - 24236922
Alignment:
Q  140 tttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcat 239  Q
    ||||||||| || | | |||||| | |||||||| |||||||||| ||||| ||||||||| || || |||||||||||||||||| |||||||||||      
T  24237055 tttatatccactacgaatgttgagaatttttatatatgcatgttgatttggtttttgttgaagacgtagcgtctatttcttgaata-ttatattattcgc 24236957  T
Q  240 gtgttttaccgctttaatagaaataaggcgttaca 274  Q
     ||||||| ||||||||||||||||||||||||||    
T  24236956 atgttttatcgctttaatagaaataaggcgttaca 24236922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 36603010 - 36602885
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||| ||| ||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  36603010 acatattgcatcactatttggaaaacaactaaattcaaaccttaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 36602911  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  36602910 atggtgctagctatatatgcacatgc 36602885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 39203687 - 39203812
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||| || |||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  39203687 acatactgcatcactatttggaaaacaactaaattcaatcctaatcaatttggatggtattatgagagttgcaccaaatgttagaagacatcaatgtcaa 39203786  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| ||||||||| |||| |||||    
T  39203787 atggttctagctataaatgcgcatgc 39203812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 19396306 - 19396182
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||| ||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| | |||||||||||| ||    
T  19396306 acatactggatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcg-agacatcaatgtaaa 19396208  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  19396207 atggtgctagctatatatgcacatgc 19396182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 38961232 - 38961345
Alignment:
Q  286 actattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagct 385  Q
    |||||| | |||||| |||||||||||||||| ||||||   |  |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  38961232 actatttggaaaacaactaaattcaatcctaatcagtttggattgtattatgagagttgcaccaaatgtttgaagacatcaatgtcaaatggtgctagct 38961331  T
Q  386 atagatgcacatgc 399  Q
    ||| ||||| ||||    
T  38961332 atatatgcatatgc 38961345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 38991577 - 38991690
Alignment:
Q  286 actattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagct 385  Q
    |||||| | |||||| |||||||||||||||| ||||||   |  |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  38991577 actatttggaaaacaactaaattcaatcctaatcagtttggattgtattatgagagttgcaccaaatgtttgaagacatcaatgtcaaatggtgctagct 38991676  T
Q  386 atagatgcacatgc 399  Q
    ||| ||||| ||||    
T  38991677 atatatgcatatgc 38991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 378
Target Start/End: Original strand, 27629721 - 27629825
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||||||   || |||||| | ||||||||| ||||| |||||||||||| |||||    
T  27629721 acatactgcatcactattggaaaaataactaaattcaatcataaccagtttggatggtattatgagagttgcaccaaatgtctgaagacatcaaagtcaa 27629820  T
Q  374 atggt 378  Q
    |||||    
T  27629821 atggt 27629825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 264
Target Start/End: Original strand, 23229364 - 23229564
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttata-tccgctgcaactgtt 160  Q
    |||||||||||||| | |||||||||| ||| || ||||| || ||| ||| ||||||||||  ||| |||||||||||||||| | || ||| ||||||    
T  23229364 cccatttgtcgggactaggagaacttt-atgttgatgtatttttgatatcacggcatgtatg--tttgaagtatatggtttataattcgttgcgactgtt 23229460  T
Q  161 gaaattttttatacatgcatg-ttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaata 258  Q
    || ||||| ||||  || ||| |||||| | ||||||| |||||| || ||||||||||||||||||||  |||||||| ||||||||| ||||||||||    
T  23229461 gagattttatata--tgtatgattgtttggaattttgtatgatgacgtagcgtctatttcttgaatattattattattcgtgtgttttatcgctttaata 23229558  T
Q  259 gaaata 264  Q
    ||||||    
T  23229559 gaaata 23229564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 11600095 - 11599965
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgt 241  Q
    |||||||||||| |||||||| | |||||||| |||||||||| ||| | ||||||||| || || ||||||||||||||||||| |   ||||||  ||    
T  11600095 tatatccgctgcgactgttgataatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttgaatatatgctttattcgcgt 11599996  T
Q  242 gttttaccgctttaatagaaataaggcgtta 272  Q
    |||||| || ||||||||||||| |||||||    
T  11599995 gttttatcgttttaatagaaatagggcgtta 11599965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 274
Target Start/End: Complemental strand, 22883881 - 22883680
Alignment:
Q  70 gtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttt 169  Q
    |||||||||||||||  || ||||||| ||||| ||||| ||||||||||||| |||  | | | |||| |||||||||| ||| |||||||| |  |||    
T  22883881 gtcgggatttggagactttatatgatgatgtatattgatctcatggcatgtatacttggaga-tgtatgatttatatccgttgcgactgttgagaaattt 22883783  T
Q  170 tatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcg 269  Q
    ||||||||||||||| | |    |||||||| || || ||||||||||||||||| | | | ||||||  |||||||| |||||||||| ||||| ||||    
T  22883782 tatacatgcatgttgatgtta--tttgttgaagacgtagcgtctatttcttgaatttatgttttattcgcgtgttttatcgctttaatataaatagggcg 22883685  T
Q  270 ttaca 274  Q
    |||||    
T  22883684 ttaca 22883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 41976514 - 41976639
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||| ||||||||||     | ||||| | ||||||||| ||| || |||||||||||||||||    
T  41976514 acatattgcatcactatttggaaagcaactaaattcaatcataaccagtttggacaagattatgagagttgcaccaaatattcgaagacatcaatgtcaa 41976613  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||||||||||||||    
T  41976614 atggtgctggctatagatgcacatgc 41976639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 18770197 - 18770418
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttat--atccg 149  Q
    ||||||||| |||||||||||||| |||||| ||||| |||||  ||||| || ||| |||||||||||||||||   |  |||||| |||||  |||||    
T  18770197 tggagattt-cccatttgtcgggacttggaggactttgatgattatgtatatttgatatcatggcatgtatgcttg--atttatatgatttatgtatccg 18770293  T
Q  150 ctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    |||| |||||||| |||| | || |||||||||||| ||||||||||| |||||||||  | |||||||||| ||||  | ||||||||   |||||||     
T  18770294 ctgcgactgttgagatttat-atgcatgcatgttgtgttggattttgtatgatgatgtatcatctatttcttaaataaatgtattattcgcatgttttat 18770392  T
Q  249 cgctttaatagaaataaggcgttaca 274  Q
     ||||||||||||||| | |||||||    
T  18770393 tgctttaatagaaataggtcgttaca 18770418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 30825497 - 30825621
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt-atttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||| |||||||||||| | |||||| |||||||||||| |||||||||| | ||| |||||| | ||||||||| |||||| ||||||||||||| ||    
T  30825497 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttgaattg-tattatgagagttgcaccaaatgttcgaagacatcaatg-ca 30825594  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| | |||||| ||||||||||    
T  30825595 aatggtgttggctatatatgcacatgc 30825621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 274
Target Start/End: Complemental strand, 11542111 - 11541895
Alignment:
Q  59 tttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactg 158  Q
    ||||||||| |||||||| |||||||  ||||||| || ||||  ||||| | ||| ||||||| ||||  |  | |||| |||||||||| | | ||||    
T  11542111 tttgcccatgtgtcgggacttggagat-ttttatgttgatgtaaattgatcttatgacatgtatactttggagatgtatgatttatatccgttacgactg 11542013  T
Q  159 ttga-aattttt-tatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaa 256  Q
    |||| ||||||| |||| |||||||||| ||||| |||| |||  ||||| ||||||||||||| ||||  | | ||||||  |||||||| ||||||||    
T  11542012 ttgagaatttttatatatatgcatgttgatttggtttttattgtagatgtagcgtctatttcttaaataaatgttttattcgcgtgttttatcgctttaa 11541913  T
Q  257 tagaaataaggcgttaca 274  Q
    |||||||| |||||||||    
T  11541912 tagaaatagggcgttaca 11541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 22317554 - 22317441
Alignment:
Q  111 catggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcg 210  Q
    |||||||||||| ||||| | ||||||| |||||||||||||| |||||||| | |||||||| | |||||||| ||||| |||| |||| || ||  ||    
T  22317554 catggcatgtatacttttgaggtatatgatttatatccgctgccactgttgagaatttttatatacgcatgttgatttggtttttattgaagacgtaacg 22317455  T
Q  211 tctatttcttgaat 224  Q
    ||||||||||||||    
T  22317454 tctatttcttgaat 22317441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 45294994 - 45294869
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| ||  ||||||||||||||| ||||||   || |||||| | ||||||| | |||||| ||||| |||||||||||    
T  45294994 acatattgcatcactatttggaaagcaattaaattcaatcctaatcagtttggatggtattatgagagttgcatcaaatgttcgaagatatcaatgtcaa 45294895  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||||||||| ||||    
T  45294894 atggtgttagctatagatgcaaatgc 45294869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 17731678 - 17731817
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||||||| |||||||| ||||||||| ||| |||||||  |||| ||||||| |||||| || || |||||||||||||||  |  ||||    
T  17731678 tggtttatatccgctgcgactgttgagattttttatgcattcatgttgaatttgaattttgtatgatgacgtagcatctatttcttgaataaatgaatta 17731777  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||  |||||||  ||||||||||||||| || ||||||    
T  17731778 ttcacatgttttattgctttaatagaaatagggtgttaca 17731817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 274
Target Start/End: Complemental strand, 23833367 - 23833156
Alignment:
Q  67 tttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtt--tatatccgctgcaactgttgaaa 164  Q
    |||||||||||||||||||| |||||| || ||||| ||| | ||||| ||||||||| ||  ||||||||||||  ||||| |||||| | |||||| |    
T  23833367 tttgtcgggatttggagaacatttatgttgatgtattttgttatcatgacatgtatgc-ttcgaagtatatggtttatatatgcgctgcgaatgttgaga 23833269  T
Q  165 --ttttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaataga 260  Q
      |||||||| |||||||||||  |||||||||||| |||||| || || ||||| |||||||||| |   ||||||  | ||||||  |||||||||||    
T  23833268 ttttttttatgcatgcatgttgaatttggattttgtatgatgacgtagcatctatatcttgaatatat-gcttattcgcgagttttattgctttaataga 23833170  T
Q  261 aataaggcgttaca 274  Q
    |||| |||||||||    
T  23833169 aatagggcgttaca 23833156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 262
Target Start/End: Complemental strand, 16000281 - 16000085
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| |||| |||||| ||||| || ||||||| ||||| ||||| ||||| ||||||| | ||  |  | |||| |||||||||||||| ||||||||    
T  16000281 cccatatgtcaggatttagagaatttatatgatgatgtatattgatctcatgacatgtatacattagagatgtatgatttatatccgctgcgactgttga 16000182  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
    ||  ||||||  |||||||||| | |   ||||||||| ||||| ||||||||||||| ||||| |   |||||| ||| ||||| | ||||||||||||    
T  16000181 aaaattttatgtatgcatgttgatgt---ttttgttgaagatgtagcgtctatttcttaaatatatgctttattcgtgtattttatcactttaatagaaa 16000085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 399
Target Start/End: Complemental strand, 6478413 - 6478309
Alignment:
Q  295 aaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagctatagatgca 394  Q
    |||||| |||||||||||||||| ||||||   |  |||||| | ||||||||| |||||| ||||| |||||||||||||||||  ||||||| |||||    
T  6478413 aaaacaactaaattcaatcctaaacagtttggattgtattatgagagttgcaccaaatgttcgaagaaatcaatgtcaaatggtggcagctatatatgca 6478314  T
Q  395 catgc 399  Q
    |||||    
T  6478313 catgc 6478309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 22345670 - 22345604
Alignment:
Q  331 tattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagctatagatgcacat 397  Q
    |||||| | ||||||||| |||||| |||||||||||||||||||||||||||||||| || |||||    
T  22345670 tattatgagagttgcaccaaatgttcgaagacatcaatgtcaaatggtgctagctatatatacacat 22345604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 264
Target Start/End: Complemental strand, 17283349 - 17283135
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttc-atggcatgtatgcttttaaagtatatggtttatat--ccg 149  Q
    ||||||||| ||| |||||||||| ||||||||| |||||| || ||||| ||  |||  ||| |||||||||||  || |||||||||||||||  |||    
T  17283349 tggagatttacccttttgtcgggacttggagaacatttatgttgatgtatttttgtttgtatgtcatgtatgcttcgaa-gtatatggtttatatatccg 17283251  T
Q  150 ctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgtttta 247  Q
    |||| |||||||| | ||||||| | |||||| ||  |||| ||||||| |||||| || |||||||||| |||||||| |   ||||||  | ||||||    
T  17283250 ctgcgactgttgaga-tttttatgcttgcatgatgaatttgaattttgtatgatgacgtagcgtctatttattgaatatatgctttattcgcgagtttta 17283152  T
Q  248 ccgctttaatagaaata 264  Q
     ||||||||||||||||    
T  17283151 tcgctttaatagaaata 17283135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 12759604 - 12759644
Alignment:
Q  359 agacatcaatgtcaaatggtgctagctatagatgcacatgc 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12759604 agacatcaatgtcaaatggtgctagctatagatgcacatgc 12759644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 22738117 - 22738255
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgtt-ttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||||||| |||||||| |||| | || |||||||||||   ||| ||||||| |||||| || ||||||||||||||||||| | | |||    
T  22738117 tggtttatatccgctgcgactgttgagatttat-atgcatgcatgttgaagttgaattttgtatgatgacgtagcgtctatttcttgaatatatgtttta 22738215  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  | |||||| |||||| ||||||||| ||| |||||    
T  22738216 ttcgcgagttttatcgctttgatagaaatatggcattaca 22738255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 33613038 - 33613144
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctg 152  Q
    |||||||||  |||||||||| || ||||||||||||||||||  ||||| ||||| ||||| ||| ||||| ||| ||||||||  |||| ||||||||    
T  33613038 tggagatttatccatttgtcgagacttggagaacttttatgattatgtattttgatatcatgacatatatgc-tttgaagtatattatttagatccgctg 33613136  T
Q  153 caactgtt 160  Q
    | ||||||    
T  33613137 cgactgtt 33613144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 18120615 - 18120681
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||||||||||| || |||| |||  |||||||| |||||||||||||||| ||||||||||    
T  18120615 cgtctatttcttgaatacttgtattgttcgcgtgttttatcgctttaatagaaatatggcgttacac 18120681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 31196769 - 31196829
Alignment:
Q  168 tttatacatgcatgttgttttggatttt---gttgatgatgtggcgtctatttcttgaata 225  Q
    ||||||||||||||||||||||||||||    ||||||| ||| |||||||||||||||||    
T  31196769 tttatacatgcatgttgttttggatttttggattgatgacgtgacgtctatttcttgaata 31196829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 44598823 - 44598873
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||    
T  44598823 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagttt 44598873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 22311157 - 22311036
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| ||||||||||||||||| ||  |||||| ||||| ||||| ||||| |||| || ||||| | || |||| |||||||| | ||  || |||||    
T  22311157 cccatatgtcgggatttggagaatttacatgatgatgtattttgatctcatgacatgaatacttttgaggtgtatgatttatatcagttgggacggttga 22311058  T
Q  163 aattttttatacatgcatgttg 184  Q
     | |||||||| ||||||||||    
T  22311057 gaatttttatatatgcatgttg 22311036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 21192947 - 21193011
Alignment:
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||  ||  ||||||  ||||||||||||||||||||||||| || ||||||    
T  21192947 gtctatttcttgaataaatactttattcgcgtgttttaccgctttaatagaaatagggtgttaca 21193011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 274
Target Start/End: Complemental strand, 21695610 - 21695472
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||||||||||||| || |||||||| |||| |  | |||||||||||  |||| ||||||| ||||||||| || |||||||||| ||||  | |||||    
T  21695610 tggtttatatccgccgcgactgttgagatttatc-tgcatgcatgttggatttgaattttgtatgatgatgtagcatctatttcttaaataaatgtatta 21695512  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||   |||||||  ||||||||||||||| || ||||||    
T  21695511 ttcgcatgttttaatgctttaatagaaatagggtgttaca 21695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 12759551 - 12759600
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtt 323  Q
    ||||| |||||||||||| | ||| || ||||||||||||||||||||||    
T  12759551 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtt 12759600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 6e-81; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 43429561 - 43429824
Alignment:
Q  14 agattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttca 112  Q
    |||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||| |||    
T  43429561 agattattctagattgtttattctggatttatttatgttgtggagatttgcccatttgttgggatttggagaatttttatgatgatgtattttgatctca 43429660  T
Q  113 tggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtc 212  Q
    |||||||||| ||||| | || |||||||||||||||||||||||||||||| |||||||| |||| ||||| ||| | |||||||||||  ||||||||    
T  43429661 tggcatgtatacttttgaggtgtatggtttatatccgctgcaactgttgaaaatttttatatatgcctgttgattttgtttttgttgatgtcgtggcgtc 43429760  T
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacacat 277  Q
    ||||||||||||| |||||||||||  |||||||| |||||||||||||||| ||||||||||||    
T  43429761 tatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaatagggcgttacacat 43429824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 41659765 - 41659507
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||| |||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  41659765 gattactctagattgtttattttggatttatttatattttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattttgatatcat 41659666  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    |  |||||| ||||| | || ||||||||||||||||||||| |||||| | ||||  |||||||||| | ||||||||||||||||||| |||  ||||    
T  41659665 gaaatgtatacttttgaggtttatggtttatatccgctgcaattgttgagaattttattacatgcatgctattttggattttgttgatgacgtgatgtct 41659566  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    ||||||||||||||||||||||||  |||||||| | |||||||||||||| |||||||    
T  41659565 atttcttgaatatttatattattctcgtgttttatcactttaatagaaatagggcgtta 41659507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 17320602 - 17320860
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||    
T  17320602 gattattctagattgtttattttggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttttatgatgttgtattttggtctcat 17320701  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||  ||||  |  |  ||| | ||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  17320702 ggcatgtagactttagagatgaatgatctatatccgctgcagctg-tgagaatttttatatatgcctgttg-tttggattttgttgatgatgtggcgtct 17320799  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||| ||||||||||||||||||  ||||||||  ||||||||||||||| |||||||||    
T  17320800 atttcctgaatatttatattattcgcgtgttttattgctttaatagaaatagggcgttaca 17320860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 21168728 - 21168988
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||| ||||| ||||||||| ||||||||||||  | | |||||||| ||||||||||||||||||||||| |||||||||| |||||  |||| ||||    
T  21168728 gattactctaggttgtttattgtggatttatttatgttttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattgtgatatcat 21168827  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| || || | || |||| ||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| ||| |||||    
T  21168828 gacatgtatactattgatgtgtatgatttatatccgctgcaactgttgagaatttttatacatacatgttattttggattttgttgatgacgtgacgtct 21168927  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||| |||||||||||  |||| ||||||||||||||||||||  ||||||||    
T  21168928 atttcttgaataattatattattcgcgtgtattaccgctttaatagaaatagagcgttaca 21168988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 6817657 - 6817866
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||||||||||||||||| || ||||||| ||||| ||||| ||||    
T  6817657 gattattctagattgtttattttggatttatttatgttgtgaagatttgcccatttgtcgggatttggagaatttatatgatgatgtattttgatctcat 6817756  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||| | || |||| |||||||||||||| |||||||| | |||||||| |||||||||| ||||| ||||||||||||||| ||||||    
T  6817757 ggcatgtatacttttgaggtgtatgatttatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgatgatgtagcgtct 6817856  T
Q  214 atttcttgaa 223  Q
    ||||||||||    
T  6817857 atttcttgaa 6817866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 55 - 264
Target Start/End: Original strand, 4164308 - 4164518
Alignment:
Q  55 gagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgc 153  Q
    ||||||| |||| |||||||||||| |||||| ||| |||||| ||||| || || ||||||||||||| ||||| || | ||||||||||||||||||     
T  4164308 gagatttacccaattgtcgggattttggagaattttaatgatgatgtattttaatatcatggcatgtatacttttgaattttatggtttatatccgctgt 4164407  T
Q  154 aactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctt 253  Q
    |  |||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||| |||||    
T  4164408 agttgttgagaatttttatacatgcatgttgttttggattttgttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgttttatcgctt 4164507  T
Q  254 taatagaaata 264  Q
    |||||||||||    
T  4164508 taatagaaata 4164518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 15551920 - 15552180
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| | || |||||||  | |||||||||||||||||||||||||||| ||||| || ||||||| ||||| ||||| ||||    
T  15551920 gattattctagattgtttattctagacttatttatgttgtggagatttgcccatttgtcgggatttagagaatttatatgatgatgtatattgatctcat 15552019  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | |||||||  |||  |  | |||| |||||||| ||||| |||||||| | |||||||| |||||||||| ||||| ||||||||| || ||  |||||    
T  15552020 gacatgtatattttggagatgtatgatttatatctgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgaagacgtaacgtct 15552119  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||    
T  15552120 atttcttgaatatttttattattcgtgtgttttaccgctttaatagagatagggcgttaca 15552180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 33371389 - 33371620
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||| |||||||| | | ||||||||||||| |  | ||||||||| || ||||||||||| ||| ||||||||||||||  ||||| ||||| |||||    
T  33371389 gattactctagattatctgttttggatttattcatgtttggagatttaccaatttgtcgggacttgaagaacttttatgattatgtattttgatatcatg 33371488  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtcta 214  Q
     || ||||||||| || |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||| || | || | |||||    
T  33371489 acaggtatgctttgaa-gtatatggtttatatccgctgcgactgttgagaatttttatacatgcatgttgttttggattttgttaattacgtagtgtcta 33371587  T
Q  215 tttcttgaatatttatattattcatgtgtttta 247  Q
    |||||||||||||||||||||||| || |||||    
T  33371588 tttcttgaatatttatattattcacgtatttta 33371620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 274
Target Start/End: Complemental strand, 12950712 - 12950459
Alignment:
Q  21 tctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgt 120  Q
    |||||||| | | ||||||||||||| | || ||||||||| ||||||| ||||||||||||||| || ||||||| ||||| ||||| |||||||||||    
T  12950712 tctagattatctgttttggatttattcatatttggagattt-cccatttatcgggatttggagaatttatatgatgatgtattttgatctcatggcatgt 12950614  T
Q  121 atgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctatttc 218  Q
    || ||||| | |  |||| |||||||||||||| |||||||| | ||||||||||||||||||| ||| | |||||  ||||||| || |||||||||||    
T  12950613 atacttttgaggg-tatgatttatatccgctgcgactgttgagaatttttatacatgcatgttgattttgtttttgaattgatgacgtagcgtctatttc 12950515  T
Q  219 ttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||  |||||||| || ||||||||||||| || ||||||    
T  12950514 ttgaatatttatattattcgcgtgttttatcgttttaatagaaatagggtgttaca 12950459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 63 - 274
Target Start/End: Complemental strand, 22637430 - 22637222
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||| ||||||| |||| |  || ||||||||||||||||||||||||||||    
T  22637430 cccatttgtcgggatttggagaatttttatgatgatgtattttgatctcatgacatgtatactttgag-gtgtatggtttatatccgctgcaactgttga 22637332  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
     |  ||| ||| |||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||  |||||||||||||    
T  22637331 gaaattt-atatatgcctgttgttt-ggattttgttgatgacgtggcgtctatttcttcaatatttatattattcgcgtgttttattgctttaatagaaa 22637234  T
Q  263 taaggcgttaca 274  Q
    || |||||||||    
T  22637233 tatggcgttaca 22637222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 53 - 231
Target Start/End: Original strand, 4147754 - 4147935
Alignment:
Q  53 tggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| |||||||||||| |||||| ||| |||||  ||||| ||||| ||||| ||||||| ||||| || | |||||||||||||||||    
T  4147754 tggagatttacccaattgtcgggatttcggagaattttgatgataatgtattttgatatcatgacatgtatacttttgaattttatggtttatatccgct 4147853  T
Q  152 gcaactgttgaaa--ttttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttata 231  Q
    |||| |||||| |  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4147854 gcaattgttgagaatttttttatacatgcatgttgttttggattttgttgatgacgtggcgtctatttcttgaatatttata 4147935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 18968226 - 18967967
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||| |||||||| ||| || ||||||||||||  ||| ||||||||||||| |||||||||||||||||| ||||||  ||   ||| ||||| ||||    
T  18968226 gattactctagattatttgttgtggatttatttatgtgttggagatttgcccacttgtcgggatttggagaatttttatattgagatattttgatatcat 18968127  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | |||||||  |||| | || |||| |||||||||||||| ||||||| ||||||| |||||||| |||||||||| ||||||||||||| ||| |||||    
T  18968126 gacatgtatattttttaggtgtatgctttatatccgctgcgactgttggaattttt-atacatgcgtgttgttttgaattttgttgatgacgtgacgtct 18968028  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||| |||||   |||| ||| |||||| ||||||||| || ||||||    
T  18968027 atttcttgaatatttatcttatttgcgtgtcttatcgctttgatagaaatagggtgttaca 18967967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 6230720 - 6230942
Alignment:
Q  53 tggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| |||||||||||| |||||| ||| |||||| ||||| ||||| ||||  ||||||| ||| |   || |||||||||||| ||||    
T  6230720 tggagatttacccaattgtcgggattttggagaattttgatgatgatgtattttgatatcattacatgtatacttctgcggtgtatggtttatattcgct 6230819  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgc 251  Q
    || ||||||||   ||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||| ||||||||   ||||||| |||    
T  6230820 gcgactgttgaggatttttatacatgcatgttgttttggatttggttgatgacgcgacgtctatttcttgaatatttgtattattcgcatgttttatcgc 6230919  T
Q  252 tttaatagaaataaggcgttaca 274  Q
    ||||||||||||| |||||||||    
T  6230920 tttaatagaaatagggcgttaca 6230942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 34557980 - 34557759
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||||||||||||| || ||||||||||||| || ||||| || ||  |||||||||||||||||| || |||||||||||||||| | |    
T  34557980 tggagatttacccatttgtcgggactttgagaacttttatgttgatgtatttttgacatcatggcatgtatgctttgaa-gtatatggtttatatctgtt 34557882  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccg 250  Q
    || |||||||| |||||| ||||||||||||||||||||||||| || ||||| ||  |||||||||||||||||| | ||||||||  |||||||| ||    
T  34557881 gcgactgttgagattttt-atacatgcatgttgttttggattttatttgatgacgtatcgtctatttcttgaatatatgtattattcgcgtgttttatcg 34557783  T
Q  251 ctttaatagaaataaggcgttaca 274  Q
     ||||||||||||| | |||||||    
T  34557782 ttttaatagaaataggacgttaca 34557759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 31416361 - 31416499
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||||||||||| ||||||||||||||| | |||||||| |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  31416361 tatggtttatattcgctgcaactgttgagaatttttatatatgcctgttgttt-ggattttgttgatgacgtggcgtctatttcttgaatatttatatta 31416459  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  |||||||| |||||||||||||| | |||||||||    
T  31416460 ttcgcgtgttttatcgctttaatagaaacagggcgttaca 31416499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 5230636 - 5230896
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| |  |||||||||  | |||||||||| ||||||||||||||||||||||  || ||||||| ||||| ||||| | ||    
T  5230636 gattattctagattgtttattctatatttatttatgttgtggagatttacccatttgtcgggatttggagattttatatgatgatgtatattgatcttat 5230735  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | |||||||| |||  |  | |||| ||||||| |||||||||| |||| | |||||||| |||||||||| ||| | ||||||||| || || ||||||    
T  5230736 gacatgtatgttttggagatgtatgatttatatacgctgcaactattgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtct 5230835  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||| |   ||||||  |||||||| | || ||||||||||| |||||||||    
T  5230836 atttcttgaatatatgctttattcgcgtgttttatcactgtaatagaaatagggcgttaca 5230896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 52841477 - 52841352
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | ||||||| |||||||||||||||||||||||| |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  52841477 acatactgcatcactatttggaaaacagttaaattcaatcctaaccagtttatattgtattatgaaagttgcaccaaatgttcgaagacatcaatgtcaa 52841378  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  52841377 atggtgctagctatatatgcacatgc 52841352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 274 - 398
Target Start/End: Complemental strand, 28165040 - 28164916
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  28165040 acatattgcatcactatttgaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 28164941  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    |||||||||||||||||||||||||    
T  28164940 atggtgctagctatagatgcacatg 28164916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 917981 - 918107
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  917981 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 918080  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    |||||||||||||||||||||||||||    
T  918081 aatggtgctagctatagatgcacatgc 918107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 5253196 - 5253071
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  5253196 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 5253097  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  5253096 atggtgctagctatagatgcacatgc 5253071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 11951929 - 11951804
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  11951929 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagttttgatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 11951830  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  11951829 atggtgctagctatagatgcacatgc 11951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 11952232 - 11952107
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  11952232 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagttttgatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 11952133  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  11952132 atggtgctagctatagatgcacatgc 11952107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 17760828 - 17761086
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | || |||||||||| |||||||| ||||||||||| || ||||||| ||||| ||||| | ||    
T  17760828 gattattctagattgtttattatggatttatttatgttgttgagatttgccaatttgtcgagatttggagaatttatatgatgatgtattttgatcttat 17760927  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| ||||    | ||||| | |||||||||||| | |||||| | |||||||| |||||||||  ||| | ||| ||||| || || |||||     
T  17760928 gacatgtatacttt----ggatatgatctatatccgctgcgaatgttgagaatttttatatatgcatgttaattttgttttcgttgaagacgtagcgtcc 17761023  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||||||||||||||  |||||||  |||||||| || ||||||||  ||| |||||||||||    
T  17761024 atttcttgaatatttcgattattcgcgtgttttatcgatttaatagggatagggcgttacaca 17761086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 19062148 - 19062406
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | || |||||||||| |||||||| ||||||||||| || ||||||| ||||| ||||| | ||    
T  19062148 gattattctagattgtttattatggatttatttatgttgttgagatttgccaatttgtcgagatttggagaatttatatgatgatgtattttgatcttat 19062247  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| ||||    | ||||| | |||||||||||| | |||||| | |||||||| |||||||||  ||| | ||| ||||| || || |||||     
T  19062248 gacatgtatacttt----ggatatgatctatatccgctgcgaatgttgagaatttttatatatgcatgttaattttgttttcgttgaagacgtagcgtcc 19062343  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||||||||||||||  |||||||  |||||||| || ||||||||  ||| |||||||||||    
T  19062344 atttcttgaatatttcgattattcgcgtgttttatcgatttaatagggatagggcgttacaca 19062406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 22477008 - 22477133
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  22477008 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 22477107  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  22477108 atggtgctagctatagatgcacatgc 22477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 135 - 275
Target Start/End: Original strand, 14182534 - 14182674
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| |||||||||||||| || ||||||| |||||||| |||||||||| ||||  ||||||||| || || |||||||||||||||||||| ||||||    
T  14182534 tatgatttatatccgctgcgaccgttgaaaatttttatatatgcatgttgatttgatttttgttgaagacgtagcgtctatttcttgaatattcatatta 14182633  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||  |||||||| |||||||||||||||| ||||||||||    
T  14182634 ttcgcgtgttttatcgctttaatagaaatagggcgttacac 14182674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 117 - 276
Target Start/End: Original strand, 14819952 - 14820110
Alignment:
Q  117 atgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatt 216  Q
    |||||||||| | || || ||||||||||||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| ||  | ||||||    
T  14819952 atgtatgcttatgaattaaatggtttatatccgctgcaactgttgagaatttt-atacatgcatgttgttctggactttgttgatgacgtaacttctatt 14820050  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||||||||||||||||||||  |||||||| |||||||||| ||| |  ||||||||||    
T  14820051 tcttgaatatttatattattcgcgtgttttatcgctttaataaaaaaagagcgttacaca 14820110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 8242006 - 8242131
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||||||||||||| |||||   ||||||||| | |||||||||  ||||||||||| |||||||||||    
T  8242006 acatactgcatcactatttggaaaacaactaaattcaatcctaactagtttggatgatattatgaaagttgcaccatatgtttgaagatatcaatgtcaa 8242105  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||| ||||||||||||||    
T  8242106 atggtgctagcaatagatgcacatgc 8242131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 39797284 - 39797159
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||| ||||||||    
T  39797284 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacattaatgtcaa 39797185  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  39797184 atggtgctagctatagatgcacatgc 39797159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 63 - 275
Target Start/End: Complemental strand, 8602406 - 8602194
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| |||||||| |||||||| || ||||||| ||||| ||||| | ||| |||||||  |||  |  | ||||  ||||||||||||| ||||||||    
T  8602406 cccatatgtcgggacttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatgtatgacttatatccgctgcgactgttga 8602307  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
     |  ||||||| ||||||||   ||||| ||||||||| || || |||||||||||||||||||||||||||||   |||||||| ||||||||||||||    
T  8602306 gaaattttatatatgcatgtatgtttggcttttgttgaagacgtagcgtctatttcttgaatatttatattatttgcgtgttttatcgctttaatagaaa 8602207  T
Q  263 taaggcgttacac 275  Q
    ||||| |||||||    
T  8602206 taaggtgttacac 8602194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 280 - 399
Target Start/End: Complemental strand, 11598912 - 11598793
Alignment:
Q  280 tgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtg 379  Q
    ||||| |||||| ||||| || |||||||||||||||| ||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||||||||    
T  11598912 tgcataactatttgaaaagcaactaaattcaatcctaatcagtttggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaaatggtg 11598813  T
Q  380 ctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||    
T  11598812 ctagctatagatgcacatgc 11598793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 53 - 276
Target Start/End: Complemental strand, 12020036 - 12019812
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatct-tgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| ||  |||||||||| ||||||||| |||||| || ||||| | |||| ||||| |||||||||||  || |||| |||||||||| ||||    
T  12020036 tggagatttaccattttgtcgggacttggagaacatttatgttgatgtatttgtgatatcatgacatgtatgcttcgaa-gtatttggtttatattcgct 12019938  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || ||| |||| |||||| || |||||||||||  |||| ||||||| |||||| || ||||||||||||| ||||| | ||||||||  |||||||||     
T  12019937 gcgactattgagattttt-atgcatgcatgttgaatttgaattttgtatgatgacgtagcgtctatttcttaaatatctgtattattcgcgtgttttact 12019839  T
Q  250 gctttaatagaaataaggcgttacaca 276  Q
    ||||||||||||||| |||||||||||    
T  12019838 gctttaatagaaatagggcgttacaca 12019812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 9879867 - 9879742
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||| ||||||||||   || |||||| ||||||||||| ||||||  ||||||| ||||||||    
T  9879867 acatactgcatcactatttggaaaacaactaaattcaatcataaccagtttggatggtattatgacagttgcaccaaatgttctaagacattaatgtcaa 9879768  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||| ||||||||||||||||||||||    
T  9879767 atgatgctagctatagatgcacatgc 9879742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 11326596 - 11326471
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | ||||||  ||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  11326596 acatactgcatcactatttggaaaacaaataaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 11326497  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  11326496 atggtgctagctatatatgcacatgc 11326471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 36168405 - 36168280
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   || |||||| | ||||||| | |||||| |||||||||||||||||    
T  36168405 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggatggtattatgagagttgcatcaaatgttcgaagacatcaatgtcaa 36168306  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  36168305 atggtgctagctatagatgcacatgc 36168280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 48975985 - 48976110
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  48975985 acatattgcatcactatttgaaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 48976084  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||||||||||    
T  48976085 atggtgctggctatatatgcacatgc 48976110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 50772190 - 50772065
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| ||||||||||||||||||||||||    
T  50772190 acatactacatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgtttgaagacatcaatgtcaa 50772091  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||| ||||||||||    
T  50772090 atggtggtagctatatatgcacatgc 50772065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 252
Target Start/End: Complemental strand, 10902580 - 10902393
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| ||||||||||||||||| || ||||||| ||||| ||||| ||||||||||||| ||||| | || |||  |||||||||||||||||||||||    
T  10902580 cccatatgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttgaggtgtataatttatatccgctgcaactgttga 10902481  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgct 252  Q
     | |||||||  |||||||||| ||| | ||||||||| || ||  | |||||||||||||||  | | ||||||  |||||||||||||    
T  10902480 gaatttttat--atgcatgttgatttagtttttgttgaagacgtaccatctatttcttgaataaatgttttattcgcgtgttttaccgct 10902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 21700513 - 21700388
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| | |||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  21700513 acatactgcatcactatttggaaaacaaccaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 21700414  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||| ||||| ||||||||||    
T  21700413 atggtgctaactatatatgcacatgc 21700388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 35436282 - 35436407
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   || |||||| | ||||||| | |||||| |||||||||||||||||    
T  35436282 acatattgcatcactatttgcaaaacaactaaattcaatcataaccagttttgatggtattatgagagttgcatcaaatgttcgaagacatcaatgtcaa 35436381  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
     |||||||||||||||||||||||||    
T  35436382 ctggtgctagctatagatgcacatgc 35436407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 54512259 - 54512384
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | ||||||  |||||||||||||||||||||    |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  54512259 acatactgcatcactatttggaaaacaaataaattcaatcctaaccagttaggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 54512358  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  54512359 atggtgctagctatatatgcacatgc 54512384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 55295733 - 55295608
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| ||||| || |||||||||||||||||||||||   ||||||||| | ||||||| | |||||| |||||||||| ||||||    
T  55295733 acatattgcatcactatttgaaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcatcaaatgttcgaagacatcattgtcaa 55295634  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| || |||||||    
T  55295633 atggtgctagctataaattcacatgc 55295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 50740674 - 50740789
Alignment:
Q  284 tcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctag 383  Q
    |||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||||||||||||||||||||||||||| |||    
T  50740674 tcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgtttgaagacatcaatgtcaaatggtggtag 50740773  T
Q  384 ctatagatgcacatgc 399  Q
    ||||| ||||||||||    
T  50740774 ctatatatgcacatgc 50740789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 44073671 - 44073545
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||| ||||||||||   || |||||| | ||||||| | |||||| |||||||||||| |||    
T  44073671 acatactccatcactatttggaaaaacaactaaattcaatcataaccagtttggatggtattatgagagttgcagcaaatgttcgaagacatcaatatca 44073572  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  44073571 aatggtgttagctatagatgcacatgc 44073545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 2845737 - 2845612
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||    |||||| ||||||| ||| |||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  2845737 acatactgcatcactatattgaaaacaactaaatttaattctaaccagtttggattgtattatgagagttgcaccgaatgttcgaagacatcaatgtcaa 2845638  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  2845637 atggtgctagctatagatgcacatgc 2845612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 23192762 - 23192887
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   |  |||| | | ||||||||| |||||| |||||||||||||||||    
T  23192762 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattttgagagttgcaccaaatgttcgaagacatcaatgtcaa 23192861  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    || |||||||||||| |||| |||||    
T  23192862 attgtgctagctatatatgcccatgc 23192887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 31369971 - 31369846
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  31369971 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 31369872  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||||||||||    
T  31369871 atggtgctggctatatatgcacatgc 31369846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 52854396 - 52854271
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||| ||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||| ||| |||||| |||||||||||||||||    
T  52854396 acatactgcatcgctatttggaaaacaactaaattcaatcctaaccagtttggattgtattataagagttgtaccaaatgttcgaagacatcaatgtcaa 52854297  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| || |||||||    
T  52854296 atggtgctagctatatatccacatgc 52854271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 54793908 - 54793783
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||| ||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  54793908 acatattgcatcactatttggaaagcaactaaattcaatcataaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 54793809  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||| ||||||||||    
T  54793808 atggtgttagctataaatgcacatgc 54793783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 53 - 272
Target Start/End: Complemental strand, 17202751 - 17202531
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatct-tgatttcatggcatgtatgcttttaaagtatatggtttata-tccgc 150  Q
    ||||||||| ||| ||||||| || ||||||||| |||||| || ||||| | |||| ||||| |||||||||||  || |||| ||||||||| ||| |    
T  17202751 tggagatttacccttttgtcgagacttggagaacatttatgttgatgtatttgtgatatcatgacatgtatgcttcgaa-gtatttggtttataatccac 17202653  T
Q  151 tgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    ||| |||||||| |||||  || |||||||||||  |||| ||||||| ||||||||| ||||||||||||||||||| | |||||||   || ||||||    
T  17202652 tgcgactgttgagatttt--atgcatgcatgttgaatttgaattttgtatgatgatgtagcgtctatttcttgaatatatgtattatttgcgtcttttac 17202555  T
Q  249 cgctttaatagaaataaggcgtta 272  Q
    ||||| |||||||||| |||||||    
T  17202554 cgcttaaatagaaatagggcgtta 17202531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 38378344 - 38378452
Alignment:
Q  166 tttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataa 265  Q
    |||||||| || |||||||||| |  |||||||||||||||  |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||     
T  38378344 tttttatatattcatgttgtttggatttttgttgatgatgtaacgtctatttcttaaatatttatattattcgtgtgttttatcgctttaatagaaatag 38378443  T
Q  266 ggcgttaca 274  Q
    || ||||||    
T  38378444 ggtgttaca 38378452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 18009175 - 18009396
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaa--cttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatat--cc 148  Q
    ||||||||| |||||||||||||| |||||| |  ||||||||||  ||||| || || |||||||||||||||||   || | ||||||||||||  ||    
T  18009175 tggagattt-cccatttgtcgggacttggaggattcttttatgattatgtattttaatatcatggcatgtatgcttg--aattttatggtttatatatcc 18009271  T
Q  149 gctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgtttta 247  Q
    ||||| |||||||| |||||  ||||||||||||   |||| ||||||| |||||| || ||||||||||||||||||| |  ||||||| ||| |||||    
T  18009272 gctgcgactgttgagatttt--atacatgcatgtgaatttgaattttgtatgatgacgtagcgtctatttcttgaatatattcattattcgtgtatttta 18009369  T
Q  248 ccgctttaatagaaataaggcgttaca 274  Q
     ||||||||||||| || || ||||||    
T  18009370 tcgctttaatagaagtagggtgttaca 18009396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 16495194 - 16495319
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   || ||| || | ||||||||| |||||| |||||||||||||| ||    
T  16495194 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtatcatgagagttgcaccaaatgttcgaagacatcaatgtaaa 16495293  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||| |||| |||||    
T  16495294 atggtgttagctataaatgcgcatgc 16495319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 19894312 - 19894187
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| ||||| |||| ||||||    
T  19894312 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgaaagttgcaccaaatgttcgaagaaatcattgtcaa 19894213  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||  |||||| ||||||||||||    
T  19894212 atggtcttagctaaagatgcacatgc 19894187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 274
Target Start/End: Complemental strand, 15548564 - 15548398
Alignment:
Q  110 tcatggcatgtatgcttttaaagtatatggtttata-tccgctgcaactgttgaaattttttatacatgcatgttgttttgga-ttttgtt-gatgatgt 206  Q
    ||||| |||| |||||||| || ||||||||||||| |||||||  |||||||| |||| | ||  ||||||||||||||||| ||||||| ||||| ||    
T  15548564 tcatgacatgcatgcttttgaattatatggtttataatccgctgtgactgttgagatttat-atgtatgcatgttgttttggagttttgtttgatgacgt 15548466  T
Q  207 ggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     ||||||||||||||||||| |   ||||||  |||||||| ||| ||||||||||||||||||||||    
T  15548465 agcgtctatttcttgaatatatgccttattcgcgtgttttatcgcattaatagaaataaggcgttaca 15548398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 6105069 - 6104944
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| |||| |||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  6105069 acatattgcatcactatttggaaaacaactaaattcaatcataactagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 6104970  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||| ||||||    
T  6104969 atggtgctggctatatatggacatgc 6104944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 11884288 - 11884509
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcatgtatgct-tttaaagtatatggtttatatccgc 150  Q
    ||||||||| |||||||||||||| |||||||||||| |||||  |||| | ||||| ||||| |||||||    |||||||| |||| ||| ||||| |    
T  11884288 tggagattt-cccatttgtcgggacttggagaactttcatgattatgtacttttgatatcatgacatgtatttaatttaaagtttatgatttgtatccac 11884386  T
Q  151 tgcaactgttgaaattttttatacatgcatgttgttttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    ||| |||||||| |||||  |||||| |||||| |||||||||| ||| || |  ||  | |||||||||||||||| | |||||||   |||||||| |    
T  11884387 tgcgactgttgagatttt--atacatacatgttattttggatttggtttgaagtcgtatcatctatttcttgaatatatttattatttgcgtgttttatc 11884484  T
Q  250 gctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||| |||||||||    
T  11884485 gctttaatagaaatagggcgttaca 11884509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 142 - 275
Target Start/End: Complemental strand, 15988551 - 15988419
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgt 241  Q
    |||||||||||| |||||||| | |||||||| |||||||||| ||||| |||| |||| || || ||||||||||||||||||  | | ||||||  ||    
T  15988551 tatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttattgaagacgtagcgtctatttcttgaataaatgttttattcgcgt 15988452  T
Q  242 gttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||| ||||| ||||||||| |||||||||||    
T  15988451 gttttatcgcttaaatagaaat-aggcgttacac 15988419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 17391034 - 17390892
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaa-attttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatt 233  Q
    |||| |||||||||||||| ||||||||  |   |||||| ||||||||||||| | | |||||||| || || ||||||||||||||||||||||||||    
T  17391034 tatgatttatatccgctgcgactgttgagcaaaatttatatatgcatgttgttt-gaaatttgttgaagacgtagcgtctatttcttgaatatttatatt 17390936  T
Q  234 attcat---gtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| |   |||| ||| ||||||||||||||||||||||||||    
T  17390935 attcgtcgcgtgtattatcgctttaatagaaataaggcgttaca 17390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 35088789 - 35088664
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| || ||| |||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  35088789 acatattgcatcactatttggaaaacaactaaattcaatcttatccattttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 35088690  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
     |||||||||||||| ||||||||||    
T  35088689 ttggtgctagctatatatgcacatgc 35088664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 69 - 274
Target Start/End: Original strand, 37918959 - 37919163
Alignment:
Q  69 tgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatttt 168  Q
    |||||||| |||||||| |||||||||| ||||| ||||| ||||| |||||||  |||  |  | |||| ||| |||||||||| |||||||| | |||    
T  37918959 tgtcgggacttggagaatttttatgatgatgtattttgatctcatgacatgtatattttggagatgtatgatttctatccgctgcgactgttgagaattt 37919058  T
Q  169 ttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggc 268  Q
    ||||| |||||||||| ||||| | || |||  || || ||| | ||||||||||||  |   |||||| ||||||||| |||||||||||||||| |||    
T  37919059 ttatatatgcatgttgatttggttctt-ttgtagacgtagcgacgatttcttgaataaatgatttattcgtgtgttttatcgctttaatagaaatagggc 37919157  T
Q  269 gttaca 274  Q
    ||||||    
T  37919158 gttaca 37919163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 274
Target Start/End: Original strand, 55513848 - 55513981
Alignment:
Q  141 ttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatg 240  Q
    ||||||||||||| |||||||| |  ||||||| ||||||||   |||||  |||||||| ||||| ||||||||||||||||||| |   ||||||  |    
T  55513848 ttatatccgctgcgactgttgagaaattttatatatgcatgtatgtttggcctttgttgaagatgtagcgtctatttcttgaatatctgctttattcgcg 55513947  T
Q  241 tgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||| ||||||||||||||||||| ||||||    
T  55513948 tgttttatcgctttaatagaaataaggtgttaca 55513981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 38815677 - 38815744
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||||||    
T  38815677 gcgtctatttcttgaatattattattattcgtgtgttttatcgctttaatagaaataaggcgttacac 38815744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 277 - 395
Target Start/End: Original strand, 51247676 - 51247794
Alignment:
Q  277 tactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatg 376  Q
    ||||| ||||||||| | |||| | |||||||||||| |||| |||||   |  |||||| | ||||||||| |||||| ||||||||||||||||||||    
T  51247676 tactgtatcactatttggaaaataactaaattcaatcataactagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaaatg 51247775  T
Q  377 gtgctagctatagatgcac 395  Q
    |||||||||||| ||||||    
T  51247776 gtgctagctatatatgcac 51247794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 11382474 - 11382599
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||| |||||||| |||| |||||| || ||||||||||||||||||||   ||| ||||| | || |||||| ||| |  |||| |||||| |||||    
T  11382474 acataccgcatcactcttgggaaaacaactgaattcaatcctaaccagtttgggtgacattatgatagctgcaccaaatatccgaaggcatcaaagtcaa 11382573  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||| ||||||    
T  11382574 atggtgctagctatagatgtacatgc 11382599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 49112375 - 49112500
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||| ||| | |||||| |||||||||||| ||||||||||   |  |||||| | | ||||||| |||||| ||||||||||||| ||     
T  49112375 acatactgcatcaccatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagaattgcaccaaatgttcgaagacatcaatgccag 49112474  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||||||||||    
T  49112475 atggtgctggctatatatgcacatgc 49112500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 325284 - 325396
Alignment:
Q  167 ttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataa 265  Q
    ||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||||| |   ||||||  |  ||||| |||||| |||||||||     
T  325284 ttttatacatgcatgttgttttggattttgtatgatgacgtagtgtctatttcttgaatatatgctttattcgcgaattttatcgctttgatagaaatag 325383  T
Q  266 ggcgttacacata 278  Q
    |||||||||||||    
T  325384 ggcgttacacata 325396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 275
Target Start/End: Complemental strand, 8687978 - 8687760
Alignment:
Q  55 gagatttg-cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgc 153  Q
    |||||||| ||||| ||||||||||||||||  || ||| ||| ||||| |||||||||||||||||||| ||| |   | |||| ||||||||||||||    
T  8687978 gagatttgacccatatgtcgggatttggagattttatatcatgatgtatattgatttcatggcatgtatg-tttgatgatgtatgatttatatccgctgc 8687880  T
Q  154 aactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctt 253  Q
     |||||||| |  ||||||| || ||| |||   ||   |||||||| || ||  |||||||||||||||||| |   |||||| | ||||||| |||||    
T  8687879 gactgttgagaaattttatatatccatattg--atgttatttgttgaagacgtaacgtctatttcttgaatatatgctttattcgtatgttttatcgctt 8687782  T
Q  254 taatagaaataaggcgttacac 275  Q
    |||||||| || ||||||||||    
T  8687781 taatagaagtagggcgttacac 8687760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 275
Target Start/End: Complemental strand, 9039847 - 9039629
Alignment:
Q  55 gagatttg-cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgc 153  Q
    |||||||| ||||| ||||||||||||||||  || ||| ||| ||||| |||||||||||||||||||| ||| |   | |||| ||||||||||||||    
T  9039847 gagatttgacccatatgtcgggatttggagattttatatcatgatgtatattgatttcatggcatgtatg-tttgatgatgtatgatttatatccgctgc 9039749  T
Q  154 aactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctt 253  Q
     |||||||| |  ||||||| || ||| |||   ||   |||||||| || ||  |||||||||||||||||| |   |||||| | ||||||| |||||    
T  9039748 gactgttgagaaattttatatatccatattg--atgttatttgttgaagacgtaacgtctatttcttgaatatatgctttattcgtatgttttatcgctt 9039651  T
Q  254 taatagaaataaggcgttacac 275  Q
    |||||||| || ||||||||||    
T  9039650 taatagaagtagggcgttacac 9039629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 11517669 - 11517735
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||||    
T  11517669 cgtctatttcttgaatatttatattattcgcgtgtattatcgctttaatagaaatatggcgttacac 11517735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 25769242 - 25769107
Alignment:
Q  140 tttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattc 237  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||  |||| ||||||| |||||| || || |||||||||||||||  | ||||||||    
T  25769242 tttatatccgctgcgactgttgaaat-ttttatgcatgcatgttgagtttgaattttgtatgatgacgtagcatctatttcttgaataaatgtattattc 25769144  T
Q  238 atgtgttttaccgctttaatagaaataaggcgttaca 274  Q
       |||||||  ||||||||||||||| || ||||||    
T  25769143 gcatgttttattgctttaatagaaatagggtgttaca 25769107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 275
Target Start/End: Complemental strand, 13330874 - 13330742
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatg 240  Q
    |||||||||| | |||||||| |||||  ||||||||||||   |||| ||||||| |||||| ||  ||||||||| |||||||| | ||||||||  |    
T  13330874 tatatccgctacgactgttgagatttt--atacatgcatgtgaatttgaattttgtatgatgacgtaacgtctattttttgaatatatttattattcgcg 13330777  T
Q  241 tgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||| ||||||||||||| || ||||||||||    
T  13330776 tgttttatcgctttaatagaagtagggcgttacac 13330742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 264
Target Start/End: Original strand, 14061373 - 14061529
Alignment:
Q  109 ttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgtt-gttttggattttgt-tgatgatgt 206  Q
    |||||| |||||||||||  ||  | ||||||||||||||||||| |||||||| | ||||||| ||||||||||   |||| ||||||| |||||| ||    
T  14061373 ttcatgacatgtatgcttcgaagttttatggtttatatccgctgcgactgttgaga-tttttatgcatgcatgttaaatttgaattttgtatgatgacgt 14061471  T
Q  207 ggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
     || |||||||||||||||  | ||||||||   |||||||  |||||||||||||||    
T  14061472 agcatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaata 14061529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14967789 - 14967728
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    |||||||||||||||||| | |||||||||||||||| | ||||||||||| ||||||||||    
T  14967789 tctatttcttgaatatttgttttattcatgtgttttatcactttaatagaagtaaggcgtta 14967728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 7254165 - 7254095
Alignment:
Q  204 tgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||  |||||||||||| ||||| ||||||    
T  7254165 tgtgacgtctatttcttgaataattgtattattcacgtgttttatagctttaatagaagtaaggtgttaca 7254095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 12490970 - 12491107
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattat 235  Q
    ||||||||||||||||| |||||||| |||||| || |||||||||    |||  |||||| ||||||  | ||||||||||||||||||  | ||||||    
T  12490970 tggtttatatccgctgcgactgttgagattttt-atgcatgcatgtgaaattgatttttgtatgatgacatagcgtctatttcttgaataaatgtattat 12491068  T
Q  236 tcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  |||||||  ||||||||||||||| || ||||||    
T  12491069 tcacatgttttattgctttaatagaaatagggtgttaca 12491107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 38813469 - 38813596
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttata--tccgc 150  Q
    ||||||||| |||||||||||| | |||||||||||| |||||  ||||| ||||| ||||| |||||||||||   |  |||||||||||||  |||||    
T  38813469 tggagattt-cccatttgtcggtacttggagaactttcatgattatgtattttgatatcatgacatgtatgcttg--atttatatggtttatatatccgc 38813565  T
Q  151 tgcaactgttgaaattttttatacatgcatgt 182  Q
    ||| ||||||| || ||||||| |||||||||    
T  38813566 tgcgactgttggaa-tttttatgcatgcatgt 38813596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 25106480 - 25106532
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttt 187  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  25106480 tatgatttatatccgctgcgactgttgaaattttttatatatgcacgttgttt 25106532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 274
Target Start/End: Complemental strand, 39653865 - 39653731
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttgga--ttttgt-tgatgatgtggcgtctatttcttgaatatttatattattca 238  Q
    |||||||||||| |||||||| |||||| || |||||||||||  || ||  | |||| ||||||||| ||||||||||||| ||||| |   ||||||     
T  39653865 tatatccgctgcgactgttgagattttt-atgcatgcatgttgaatttgaaatattgtatgatgatgtagcgtctatttcttaaatatatgctttattcg 39653767  T
Q  239 tgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     | |||||| |||||||||||||||| |||||||||    
T  39653766 cgagttttatcgctttaatagaaatagggcgttaca 39653731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 293840 - 293777
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||| || |||||||||  | ||||| |||||||||||||||| |||||||||    
T  293840 tctatttcttgaataattgtattattcacctattttatcgctttaatagaaatagggcgttaca 293777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 12168888 - 12168838
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    |||||||||||||||||| | |||||| |||||||||||| ||||||||||    
T  12168888 acatactgcatcactatttggaaaacaactaaattcaatcataaccagttt 12168838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 37617075 - 37616950
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||||| |||| | ||||||| |||||| |||| |||   || |||||| | ||||||||| ||| |   |||  ||||| |||||    
T  37617075 acatactgcatcactattgggaaaataactaaatttaatcctgaccaatttggatggtattataagagttgcaccaaatatccaaaggaatcaaagtcaa 37616976  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    || || ||||||||||||| ||||||    
T  37616975 atagttctagctatagatgtacatgc 37616950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 277
Target Start/End: Complemental strand, 14287035 - 14286893
Alignment:
Q  137 tggtttatat-ccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatt 233  Q
    |||||||||| ||||||| |||||||| |||| | || |||||||||||  |||| ||||||  |||| | || ||||||||||||||||||  | ||||    
T  14287035 tggtttatattccgctgcgactgttgagatttat-atgcatgcatgttgagtttgaattttgaatgatcacgtagcgtctatttcttgaataaatgtatt 14286937  T
Q  234 attcatgtgttttaccgctttaatagaaataaggcgttacacat 277  Q
    ||||   |||||||  ||||||||||||||| || |||||||||    
T  14286936 attcgcatgttttattgctttaatagaaatagggtgttacacat 14286893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 274
Target Start/End: Complemental strand, 15874256 - 15874084
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttatat--ccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tg 199  Q
    ||||| ||||| |||||||||||| || ||| ||| |||||||  ||| ||| ||| |||| |||||| || |||||||||||  |||| ||||||| ||    
T  15874256 ttgatatcatgtcatgtatgctttgaa-gtaaatgatttatatatccgttgcgactattgagattttt-atgcatgcatgttgaatttgaattttgtatg 15874159  T
Q  200 atgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| || ||||||||||||||||||| |   ||||||  | |||||| |||||||||| ||||| || ||||||    
T  15874158 atgacgtagcgtctatttcttgaatatatgctttattcgcgagttttatcgctttaataaaaatagggtgttaca 15874084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 15515705 - 15515544
Alignment:
Q  67 tttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcatgtatgcttttaaagtatatggtt--tatatccgctgcaactgttgaa 163  Q
    |||||||||| |||||||||||| |||||  |||| | ||||| |||||||||||||||  || || || ||||||  |||||  ||||| ||||||||     
T  15515705 tttgtcgggacttggagaactttcatgattgtgtatttttgatatcatggcatgtatgc--ttgaattacatggtttatatatatgctgcgactgttgag 15515608  T
Q  164 attttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatat 226  Q
    | ||||||| || ||||||||  |||| || |||| ||| ||||| |||||||||||||||||||    
T  15515607 a-tttttatgcaagcatgttgaatttgaatattgtatgacgatgtagcgtctatttcttgaatat 15515544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 16340973 - 16341023
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    ||||| ||| |||||||| | |||||| |||||||||||||||||||||||    
T  16340973 acatattgcgtcactatttggaaaacaactaaattcaatcctaaccagttt 16341023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 25607605 - 25607670
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||| ||||||||   |||||||  ||||||| ||||||| |||||||||    
T  25607605 gcgtctatttcttgaatattt-tattattcgcatgttttattgctttaagagaaatagggcgttaca 25607670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 54648570 - 54648528
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatccta 316  Q
    |||||||||||||||||| | |||||| |||||||||||||||    
T  54648570 acatactgcatcactatttggaaaacaactaaattcaatccta 54648528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 20418725 - 20418676
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaata 258  Q
    |||||||||||||||||||| ||||||||  |||||||  ||||||||||    
T  20418725 cgtctatttcttgaatatttttattattcgcgtgttttgtcgctttaata 20418676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 24902105 - 24902166
Alignment:
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||| ||||||| ||||||||  |||||||| |||||||||||||  | |||||||||    
T  24902105 tatttcttaaatatttgtattattcgcgtgttttatcgctttaatagaagcatggcgttaca 24902166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 4e-79; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 23236433 - 23236693
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||||||||| |||||||||||||  | |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  23236433 gattattctagattgtttatcttggatttatttatgttgtggagatttacccatttgtcgggatttggagaatttttatgatgttgtattttgatctcat 23236532  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||| | || |||| ||||||||||||||||||||||| | |||||||| |||  ||||| |||||||||||||||||| ||| |||||    
T  23236533 ggcatgtatacttttgaggtgtatgatttatatccgctgcaactgttgagaatttttatatatgtctgttg-tttggattttgttgatgacgtgacgtct 23236631  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||| ||||||||||    
T  23236632 atttcttgaatatttatattatttgcgtgttttatcgctttaatagaaatagggcgttacac 23236693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 24082226 - 24082005
Alignment:
Q  53 tggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| |||||||||||| |||||| ||| |||||| ||||| ||||| ||||| ||||||| ||||| || |||||||||||||||||||    
T  24082226 tggagatttacccagttgtcgggattttggagaattttgatgatgatgtattttgatatcatgtcatgtatacttttgaattatatggtttatatccgct 24082127  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgc 251  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||||| || |||    
T  24082126 gcaactgttgagaatttttatacatgcatgttgttttggattttgttgatgacgtggcgtctatttcttgaata-ttatattattcgcgtgttgtatcgc 24082028  T
Q  252 tttaatagaaataaggcgttaca 274  Q
    ||||||||||||| |||||||||    
T  24082027 tttaatagaaatagggcgttaca 24082005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 5623441 - 5623701
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||| ||||| ||||||||| ||||||||||||  | | |||||||| ||||||||||||||||||||||| |||||||||| |||||  |||| ||||    
T  5623441 gattactctaggttgtttattgtggatttatttatgttttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattgtgatatcat 5623540  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| || || | || |||| ||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| ||| |||||    
T  5623541 gacatgtatactattgatgtgtatgatttatatccgctgcaactgttgagaatttttatacatacatgttattttggattttgttgatgacgtgacgtct 5623640  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||| |||||||||||  |||| ||||||||||||||||||||  ||||||||    
T  5623641 atttcttgaataattatattattcgcgtgtattaccgctttaatagaaatagagcgttaca 5623701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 29912197 - 29911937
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||| | | || ||||||||||||  ||| ||||||||||||| |||||||||||||||||| ||||||  ||   | | ||||| ||||    
T  29912197 gattattctagattatctgttgtggatttatttatgtgttggagatttgcccacttgtcgggatttggagaatttttatattgagattttttgatatcat 29912098  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||| |  | |||| ||| |||| ||||| ||||||| || |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  29912097 ggcatgtatacttttgagatgtatgatttttatctgctgcgactgttggaaatttttatacatgcatgttgtttcggattttgttgatgatgtgacgtct 29911998  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||| || ||||||    
T  29911997 atttcttgaatatttatattattcgtgtgttttatcgctttaatagaaatagggtgttaca 29911937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 3420855 - 3421115
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||| ||||||||||||||| ||||||||||||  | | |||||||| | ||||||||||||| |||| ||  ||||| ||| ||||| ||||| ||||    
T  3420855 gattactctagattgtttattgtggatttatttatgttttggagattttctcatttgtcgggatgtggaaaaaatttataatgatgtattttgatatcat 3420954  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| ||||| | || |||| |||||||| ||||| | |||||| | ||||||||||||||| || ||||||||||||||||||| ||| |||||    
T  3420955 gacatgtatacttttgaggtgtatgatttatatctgctgcgattgttgagaatttttatacatgcatcttattttggattttgttgatgacgtgacgtct 3421054  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  3421055 atttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 3421115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 19872062 - 19871804
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||| |||||||||||| ||||||||||  | |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  19872062 gattattctatattgtttatttttgatttatttatgttgtggagatttgctcatttgtcgggatttggagaa-ttttatgatgttgtattttgatctcat 19871964  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||  ||||  |  | |||| | | |||| ||||||||| |||| | |||||||| |||| |||||||| ||||||||||||||| || ||||||    
T  19871963 gacatgtagactttggagatgtatgatctgtatctgctgcaactattgagaatttttatatatgcctgttgttt-ggattttgttgatgacgtagcgtct 19871865  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||||    ||||||| |||||||||||||||| |||||||||    
T  19871864 atttcttgaatatttatattatttgcttgttttatcgctttaatagaaatagggcgttaca 19871804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 24228017 - 24228213
Alignment:
Q  67 tttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatt 166  Q
    |||||||||| |||||||| ||||||||   ||||| ||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||  | |    
T  24228017 tttgtcgggacttggagaatttttatgactatgtattttgatatcatggcatgtatgctttgaa-gtatatggtttatatccgctgcgactgttgggaat 24228115  T
Q  167 ttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| | ||||||||   ||||||| |||||||| |||||||    
T  24228116 ttttatacatgcatgttgttttggattttgttgatgacatagcgtctatttcttgaatatatgtattattcgcatgttttatcgctttaagagaaata 24228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 26561810 - 26562069
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||| ||||||||||||||| || |||||||||  | | ||||| || ||||||||||||||||||||||| |||||||||  || || ||||| ||||    
T  26561810 gattactctagattgtttattgtgaatttatttatgttttggagaattacccatttgtcgggatttggagaaattttatgataatgaattttgatatcat 26561909  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||| ||||| ||||| | |  |||| |||||||||||||| |||||||| | |||| |||||||||||||| ||||| ||||||||| ||  ||  ||||    
T  26561910 ggcttgtatacttttgaggagtatgatttatatccgctgcgactgttgagaatttt-atacatgcatgttgatttggtttttgttgaggacatgatgtct 26562008  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||  |||| |||||||||||| ||||||| |||||||||    
T  26562009 atttcttgaatatttatattattcgggtgtattaccgctttaaaagaaatagggcgttaca 26562069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 6454817 - 6454594
Alignment:
Q  53 tggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    |||| ||||||||| ||||||| |||| |||||| ||| |||||| ||||| ||||  ||||  ||||||||||||| || |||||||||| ||||||||    
T  6454817 tggatatttgcccagttgtcggaattttggagaattttgatgatgatgtatgttgacatcataacatgtatgcttttgaattatatggtttgtatccgct 6454718  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||| | | |||| ||||||||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||||||||||  |||||||| |    
T  6454717 gcgactgttaagaatttt-atacatgcatgttattttggattttgagttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgttttatc 6454619  T
Q  250 gctttaatagaaataaggcgttaca 274  Q
    |||||||||||| || |||||||||    
T  6454618 gctttaatagaagtagggcgttaca 6454594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 37463650 - 37463776
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  37463650 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 37463749  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    |||||||||||||||||||||||||||    
T  37463750 aatggtgctagctatagatgcacatgc 37463776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 274
Target Start/End: Original strand, 16837814 - 16838017
Alignment:
Q  70 gtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttt 169  Q
    |||||||||||||||| || ||||||||||||| || || | ||||||||||  ||||  |  | || | |||||||||||||| ||| |||| | ||||    
T  16837814 gtcgggatttggagaatttatatgatgttgtatttttatcttatggcatgtagactttggagatgtaagatttatatccgctgcgactattgagaatttt 16837913  T
Q  170 tatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcg 269  Q
    |||| |||||||||  ||| | ||||||||| ||  | ||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  16837914 tatatatgcatgttaattttg-ttttgttgaagacctagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaataaggcg 16838012  T
Q  270 ttaca 274  Q
    |||||    
T  16838013 ttaca 16838017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 104 - 274
Target Start/End: Original strand, 5453441 - 5453613
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga-aattttttatacatgcatgttgttttggattttg--ttga 200  Q
    ||||| |||||||||||||||||| ||  |||||||||||||||||||||  ||||||| || ||||||||| ||| |||||||||||||||||  ||||    
T  5453441 ttgatatcatggcatgtatgctttgaat-tatatggtttatatccgctgcggctgttgataagtttttatacttgcgtgttgttttggattttgagttga 5453539  T
Q  201 tgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     || || |||||||||||||||||| || | ||||||  |||||||| |||||||||||||||| || ||||||    
T  5453540 cgacgtagcgtctatttcttgaataattgtcttattctcgtgttttatcgctttaatagaaatatggtgttaca 5453613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 1852869 - 1852744
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | |||||||||  |||||||||||||||||||||||    
T  1852869 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccagatgtttgaagacatcaatgtcaa 1852770  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    || |||||||||||| ||||||||||    
T  1852769 atcgtgctagctatatatgcacatgc 1852744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 3211149 - 3211024
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| |||||||| ||| |||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  3211149 acatactacatcactatttgaaaaacaactagattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 3211050  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| |||| |||||    
T  3211049 atggtgctagctataaatgcgcatgc 3211024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 3398093 - 3397968
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  3398093 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 3397994  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  3397993 atggtgctagctatatatgcacatgc 3397968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 12589232 - 12589107
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||  | |||||||||||||||||||||||   ||||||||| | |||||| || |||||| |||||||||||||||||    
T  12589232 acatattgcatcactatttggaaagtaactaaattcaatcctaaccagtttggatgatattatgagagttgcgccaaatgttcgaagacatcaatgtcaa 12589133  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  12589132 atggtgctagctatagatgcacatgc 12589107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 399
Target Start/End: Original strand, 19394764 - 19394881
Alignment:
Q  282 catcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgct 381  Q
    |||||||||| | |||||| ||||||||||||||||||| |||   || |||||| | ||||||||| |||||| |||||||||||||||||||||||||    
T  19394764 catcactatttggaaaacaactaaattcaatcctaaccattttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaaatggtgct 19394863  T
Q  382 agctatagatgcacatgc 399  Q
    ||||||||||||||||||    
T  19394864 agctatagatgcacatgc 19394881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 21615113 - 21614949
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatat--ccgctgcaactgt 159  Q
    |||||||||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||||||  ||| |||||||||||||||||  |||||||  ||||    
T  21615113 cccatttgtcgggacttggagaacatttatgttaatgtatttttgatatcatggcatgtatg--tttgaagtatatggtttatatatccgctgcggctgt 21615016  T
Q  160 tgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatat 226  Q
    ||| |||||| ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  21615015 tgagattttt-atacatgcatgttgttttggattttgtatgatgacgtagcgtctatttcttgaatat 21614949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 33612092 - 33611967
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  33612092 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 33611993  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  33611992 atggtgctagctatatatgcacatgc 33611967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 14345694 - 14345952
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttg-cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||| || |  ||||||||||||  | | |||||||  ||||| |||||||| ||| |||| || ||||||| ||||| ||||| ||||    
T  14345694 gattattctagattggttttgctggatttatttat-tattgagattttacccatatgtcgggacttgaagaatttatatgatgatgtattttgatctcat 14345792  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| ||||  |  | |||| |||||||| ||||  |||||||| | | |||||| |||  | ||| || |||||||||||| || || ||||||    
T  14345793 gacatgtatactttggagatgtatgatttatatctgctgtgactgttgagaatatttatatatgtctattggtt-ggattttgttgaagacgtagcgtct 14345891  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||||||    
T  14345892 atttcttgaatatttatattattcgtgtgttttatctctttaatagaaatagggcgttaca 14345952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 167 - 275
Target Start/End: Complemental strand, 22879894 - 22879786
Alignment:
Q  167 ttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataag 266  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||||||||||||||| ||||||  |||||||| |||||||||||||||| |    
T  22879894 ttttatacatgcatgttattttggattttgtgaatgacgtggcgtctatttcttgaatatttatgttattcgcgtgttttatcgctttaatagaaatagg 22879795  T
Q  267 gcgttacac 275  Q
    | |||||||    
T  22879794 gtgttacac 22879786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 31296484 - 31296358
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtc-a 372  Q
    ||||||| |||||||||| | |||||| |||||||||||| ||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||| |    
T  31296484 acatacttcatcactatttggaaaacaactaaattcaatcataaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 31296385  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    |||||||||||||||||||||||||||    
T  31296384 aatggtgctagctatagatgcacatgc 31296358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 289875 - 290000
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   || |||||| | ||||||| | |||||| |||||||||||||| ||    
T  289875 acatattgcatcactatttgcaaaacaactaaattcaatcataaccagtttggatggtattatgagagttgcatcaaatgttcgaagacatcaatgtaaa 289974  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  289975 atggtgctagctatagatgcacatgc 290000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 53 - 275
Target Start/End: Original strand, 21228439 - 21228662
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    |||||| || ||| |||||||||| || ||||||||||||| || ||||| || ||| ||||  |||||||||||  || |||| |||||||||||||||    
T  21228439 tggagaattacccttttgtcgggacttagagaacttttatgttgatgtatttttgatatcataacatgtatgcttcgaa-gtatctggtttatatccgct 21228537  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| |||||| || |||||||||||  |||| ||||||| |||||| ||  |||||||||||||||||| | |||||||   ||||||||||    
T  21228538 gcgactgttgagattttt-atgcatgcatgttgaatttgaattttgtatgatgacgtaacgtctatttcttgaatatatgtattatttgcgtgttttacc 21228636  T
Q  250 gctttaatagaaataaggcgttacac 275  Q
    |||||||| |||||| ||| ||||||    
T  21228637 gctttaatcgaaatagggcattacac 21228662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 274 - 393
Target Start/End: Original strand, 19447398 - 19447517
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   |  ||||||   ||||||||| |||||| |||||||||||||||||    
T  19447398 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgtgagttgcaccaaatgttcgaagacatcaatgtcaa 19447497  T
Q  374 atggtgctagctatagatgc 393  Q
    ||||||||||||||| ||||    
T  19447498 atggtgctagctatatatgc 19447517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 2194432 - 2194557
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  2194432 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 2194531  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||||||||||    
T  2194532 atggtgctggctatatatgcacatgc 2194557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 11963742 - 11963561
Alignment:
Q  18 tattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggc 116  Q
    |||||||||||||||||| | |||||||||| || ||||||||||||||||||||| |||||||||||  || ||||||| ||||| ||||| | ||| |    
T  11963742 tattctagattgtttattctagatttatttatattgtggagatttgcccatttgtcaggatttggagattttatatgatgatgtatattgatcttatgac 11963643  T
Q  117 atgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgtt 198  Q
    || |||  |||| |  | |||| |||||||||||||| ||| |||| | |||||||| |||||||||| ||| | |||||||    
T  11963642 atttatatttttgagatgtatgatttatatccgctgcgactattgagaatttttatatatgcatgttgattttgtttttgtt 11963561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 20996896 - 20996771
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||||||| |||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  20996896 acatattgcatcattatttggaaaacaactaaattcaatcttaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 20996797  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  20996796 atggtgctagctatatatgcacatgc 20996771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 26322027 - 26321902
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  26322027 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 26321928  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||| ||||||||||| ||||||||||    
T  26321927 atgatgctagctatatatgcacatgc 26321902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 7284944 - 7285068
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| ||||||||||| |||||    
T  7284944 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaacgtcaa 7285043  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    ||||||||| ||||| |||||||||    
T  7285044 atggtgctaactatatatgcacatg 7285068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 3027727 - 3027852
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||| | ||||||||||| |||||||||||   |  ||||||   | ||||||| |||||| |||||||||||||||||    
T  3027727 acatactgcatcactatttggaaaataactaaattcaattctaaccagtttggattgtattatgcgatttgcaccaaatgttcgaagacatcaatgtcaa 3027826  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  3027827 atggtgctagctatatatgcacatgc 3027852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 3151555 - 3151430
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| ||||||  ||||||||||||||||    
T  3151555 acatactgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttctaagacatcaatgtcaa 3151456  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||| ||||||||||  |||||||||    
T  3151455 atggagctagctatatgtgcacatgc 3151430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 20349208 - 20349332
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | ||||||  ||| ||||||||||||||||||   |  |||||| | ||||||||  |||||| |||||||||||||||||    
T  20349208 acatactgcatcactatttggaaaacaaataa-ttcaatcctaaccagtttggattgtattatgagagttgcactaaatgttcgaagacatcaatgtcaa 20349306  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  20349307 atggtgctagctatatatgcacatgc 20349332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 27065169 - 27065294
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||||||||||||||    ||||| |||||||||||||||||||||||   |  |||||| ||| || |||| |||||| |||||||||||||||||    
T  27065169 acatactgcatcactattttgtaaacaactaaattcaatcctaaccagtttggattgtattatgacaattccaccaaatgttcgaagacatcaatgtcaa 27065268  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||||||| || ||||||||||    
T  27065269 atggtgctagctgtatatgcacatgc 27065294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 30141841 - 30141966
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||||| |||||| | ||| ||||||||||||||| ||||||||||   | ||||||| | |||| |||| ||||||  ||||||||| ||||||    
T  30141841 acatattgcatgactatttggaaagcagctaaattcaatcttaaccagtttggataatattatgagagtttcaccaaatgttcaaagacatcattgtcaa 30141940  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  30141941 atggtgctagctatagatgcacatgc 30141966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 274
Target Start/End: Complemental strand, 19860421 - 19860213
Alignment:
Q  68 ttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatc--cgctgcaactgttgaaa 164  Q
    ||||||||| ||||||||| |||||| || ||||| || ||| || || |||||||| |||| |||||||||| ||||||   || ||| ||| |||| |    
T  19860421 ttgtcgggacttggagaacatttatgttgatgtatttttgatatcttgacatgtatg-ttttgaagtatatggcttatatattcgttgcgactattgaga 19860323  T
Q  165 ttttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaat 263  Q
    ||||| ||||||||||||| ||||||||||||| ||| || || | ||||||||||||||||  |   |||||||||||||| |  ||||||||||||||    
T  19860322 ttttt-atacatgcatgttcttttggattttgtatgaggacgtagtgtctatttcttgaataaatgccttattcatgtgtttaattgctttaatagaaat 19860224  T
Q  264 aaggcgttaca 274  Q
    |||||||||||    
T  19860223 aaggcgttaca 19860213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 272
Target Start/End: Complemental strand, 23412081 - 23411879
Alignment:
Q  69 tgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatttt 168  Q
    |||| |||||||||||| || ||||||| ||||| ||||| ||||||||||||| ||||  |  | |||| ||||||| || ||| ||| |||| | |||    
T  23412081 tgtcaggatttggagaatttatatgatgatgtat-ttgatctcatggcatgtatactttggagatgtatgatttatattcggtgcgactattgagaattt 23411983  T
Q  169 ttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggc 268  Q
    |||||||||||||||| ||||| |||| |||  || ||  |||||||||||||||||  |   ||||||   ||||||| ||||||||||||||||||||    
T  23411982 ttatacatgcatgttgatttggtttttattgtagacgtaacgtctatttcttgaataaatgatttattcgcatgttttatcgctttaatagaaataaggc 23411883  T
Q  269 gtta 272  Q
    ||||    
T  23411882 gtta 23411879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 4881552 - 4881677
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| ||| ||||||| ||||| |||||   |  |||||| | ||||||||| |||||| |||||||||||| ||||    
T  4881552 acatattgcatcactatttggaaaacaactacattcaatactaacaagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatatcaa 4881651  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  4881652 atggtgctagctatatatgcacatgc 4881677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 278 - 399
Target Start/End: Original strand, 21029379 - 21029500
Alignment:
Q  278 actgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatgg 377  Q
    |||||||||||||| | || ||| |||||||||||| ||||||||||   |  |||||| | |||| |||| |||||| |||||| ||||||||||||||    
T  21029379 actgcatcactatttggaacacaactaaattcaatcataaccagtttggattgtattatgagagtttcaccaaatgttcgaagacgtcaatgtcaaatgg 21029478  T
Q  378 tgctagctatagatgcacatgc 399  Q
    ||||||||||| ||||||||||    
T  21029479 tgctagctatatatgcacatgc 21029500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 28887919 - 28887783
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||||| | |||||||| |||||| || ||| |||||||  |||||||||||| |||||| ||  |||||||||||||||||||  |||||    
T  28887919 tggtttatatccgctacgactgttgagattttt-atgcattcatgttgaatttggattttgtatgatgacgtatcgtctatttcttgaatattattatta 28887821  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    |||  |||||||| |||||||||||||||| |||||||    
T  28887820 ttcgcgtgttttatcgctttaatagaaatagggcgtta 28887783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 34716928 - 34717053
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | |||||| |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  34716928 acatattgcatcaccatttggaaaacaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 34717027  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  34717028 atggtgctagctatagatgcacatgc 34717053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 11963213 - 11963146
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||    
T  11963213 gcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacac 11963146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 277
Target Start/End: Original strand, 37190190 - 37190401
Alignment:
Q  68 ttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcatgtatgcttttaaagtatatggtttatatcc--gctgcaactgttgaaa 164  Q
    |||| |||| ||||||||| |||||| || |||| | ||||| |||||||||||||| |||| |||||||||||||||||    ||||| | |||| | |    
T  37190190 ttgttgggacttggagaacatttatgttgatgtacttttgatatcatggcatgtatg-ttttgaagtatatggtttatatatttgctgcgaatgttaaga 37190288  T
Q  165 ttttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaat 263  Q
    ||||| | ||||||||||||||||| ||||||| |||||| || ||||||||||||||||||| |   ||||||  | ||||||  ||| ||||||||||    
T  37190289 ttttt-agacatgcatgttgttttgaattttgtatgatgacgtagcgtctatttcttgaatatatgatttattcgcgagttttattgctgtaatagaaat 37190387  T
Q  264 aaggcgttacacat 277  Q
    || | |||||||||    
T  37190388 aatgtgttacacat 37190401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 41690614 - 41690739
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  41690614 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgaaagtttcaccaaatgttcgaagacatcattgtcaa 41690713  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  41690714 atggtgctagctatagatgcacatgc 41690739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 30688582 - 30688706
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||||||||||||   |||||| |||||||||||| ||||||||||   |  |||||| | || |||||| |||||| ||||||||||||||||     
T  30688582 acatattgcatcactatttagaaaacaactaaattcaatcataaccagtttggattgtattatgagagctgcaccaaatgttcgaagacatcaatgtcag 30688681  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    |||||||| |||||| |||||||||    
T  30688682 atggtgctggctatatatgcacatg 30688706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 276
Target Start/End: Original strand, 11765856 - 11765996
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| |||||||||||||| ||| |||| |  ||||||| ||||||||||||   | ||||||||| || ||  |||||||||||||||||  |   |||    
T  11765856 tatgatttatatccgctgcgactattgagaaattttatatatgcatgttgttggtg-ttttgttgaagacgtaacgtctatttcttgaataaatgattta 11765954  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    ||| ||||||||| |||||||||||||||| |||||||||||    
T  11765955 ttcgtgtgttttatcgctttaatagaaatagggcgttacaca 11765996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 25697464 - 25697339
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||| ||    
T  25697464 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtaaa 25697365  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  25697364 atggtgctagctatagatgcacatgc 25697339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 33628770 - 33628834
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    ||||||||||||||||||| | | |||||||||||||||| |||||||||||||||| |||||||    
T  33628770 gcgtctatttcttgaatatatgttttattcatgtgttttatcgctttaatagaaatagggcgtta 33628834  T

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Target: chr5; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 20456635 - 20456754
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| ||||||||||||||||| || ||||||| ||||| ||||| |||||||||||||  |||  |  | |||| |||||||||||||  ||||||||    
T  20456635 cccatatgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgtgactgttga 20456734  T
Q  163 aattttttatacatgcatgt 182  Q
     | |||||||| ||||||||    
T  20456735 gaatttttatatatgcatgt 20456754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 37985797 - 37985730
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||| || |||||||    
T  37985797 gcgtctatttcttgaatatttgtattattcacgtgtgttatcgctttaatagaaatagggggttacac 37985730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 274
Target Start/End: Complemental strand, 13793236 - 13793026
Alignment:
Q  67 tttgtcgggatttggagaacttttatgatgttgtatcttg-at-ttcatggcatgtatgcttttaaagtatat-ggtttatatccgctgcaactgttgaa 163  Q
    |||||||||| ||||||||| |||||| || ||||| ||  || |||||| |||||||||||  || |||| | ||||||||| |||||| ||||||||     
T  13793236 tttgtcgggacttggagaacatttatgttgatgtattttttatattcatgacatgtatgcttcgaa-gtattttggtttatattcgctgcgactgttgag 13793138  T
Q  164 attttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
    |||| | || |||||||||||  |||| ||||||| |||||| || ||||||||||||||||||| |   ||||||  | ||||||  ||||||||||||    
T  13793137 atttgt-atgcatgcatgttgactttgaattttgtatgatgacgtagcgtctatttcttgaatatatgctttattcgcgagttttatggctttaatagaa 13793039  T
Q  262 ataaggcgttaca 274  Q
    ||| |||||||||    
T  13793038 atagggcgttaca 13793026  T

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Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 32968393 - 32968469
Alignment:
Q  198 tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||| ||||||||||||||| ||| | ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  32968393 tgatgatgtagcgtctatttcttgagtatatgtattattcgcatgttttatcgctttaatagaaataaggtgttaca 32968469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 274
Target Start/End: Original strand, 37483140 - 37483274
Alignment:
Q  141 ttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttg--atgatgtggcgtctatttcttgaatatttatattattca 238  Q
    ||||||||||||| ||||||||    ||||||| ||||||||||||| | |||||| ||  | || || |||| ||||| |||||||||||||||||||     
T  37483140 ttatatccgctgcgactgttgatgaattttatatatgcatgttgttt-gaattttgatgtgaagacgtagcgtttatttattgaatatttatattattcg 37483238  T
Q  239 tgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     |||| ||| ||||| ||||||||||||| ||||||    
T  37483239 cgtgtattatcgcttgaatagaaataaggtgttaca 37483274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 18533106 - 18533168
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||| |||||||||  |||||||  |||||||||||||||||||||||||    
T  18533106 tctatttcttgaatattt-tattattcacatgttttattgctttaatagaaataaggcgttaca 18533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 274
Target Start/End: Complemental strand, 430824 - 430687
Alignment:
Q  138 ggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattat 235  Q
    |||||||||||||||| |||||||| |||| | || |||||||||||  |||| ||||||| |||||| || || |||||||||||||||  | ||||||    
T  430824 ggtttatatccgctgcgactgttgagatttat-atgcatgcatgttgaatttgaattttgtatgatgacgtagcatctatttcttgaataaatgtattat 430726  T
Q  236 tcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||   |||||||  ||||||||||||||| || ||||||    
T  430725 tcgcatgttttattgctttaatagaaatagggtgttaca 430687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 22606133 - 22606008
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||||||||||   |||||||||||||| |||| |||   ||  ||||| | ||||||||| ||| |   |||  ||||| |||||    
T  22606133 acatactgcatcactattggaaaaatgactaaattcaatcctgaccaatttggatggcattataagagttgcaccaaatatccaaaggaatcaaagtcaa 22606034  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| ||||||||||||| ||||||    
T  22606033 atggttctagctatagatgtacatgc 22606008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 36385651 - 36385526
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||||| |||| | ||||||||||| || |||| |||   || |||||| | ||||||||| ||| |   |||  ||||| |||||    
T  36385651 acatactgcatcactattgggaaaataactaaattcaattctgaccaatttggatggtattataagagttgcaccaaatatccaaaggaatcaaagtcaa 36385552  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| ||||||||||||| ||||||    
T  36385551 atggttctagctatagatgtacatgc 36385526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 23491943 - 23491804
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||||||  ||||||||||||||| || ||||||||| |  |||| |||||||| ||||| || || || ||||||||| || ||   |||    
T  23491943 tggtttatatccgctgtgactgttgaaattttt-atgcatgcatgtcgaatttgaattttgtttgatgaagtagcatcaatttcttgagtaattgcctta 23491845  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||  | ||||||||||||||||||||||| || |||||||    
T  23491844 ttcgcgagttttaccgctttaatagaaatagggtgttacac 23491804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 3671443 - 3671349
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattatt 236  Q
    |||||||||||| ||| |||| |||||| || |||||||||| ||||| ||||||| |||||| || || |||||||||||||||  |||||||||    
T  3671443 tatatccgctgcgactattgagattttt-atgcatgcatgttattttgaattttgtatgatgacgtagcatctatttcttgaataaatatattatt 3671349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 34375352 - 34375302
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||    
T  34375352 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagttt 34375302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 22056071 - 22056133
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||| ||||||||   |||||||  ||||||||||||||| |||||||||    
T  22056071 tctatttcttgaatattt-tattattcgcatgttttattgctttaatagaaatagggcgttaca 22056133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 23452895 - 23452807
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaata 225  Q
    ||||||||||||||||| |||||||  | ||| ||| |||||||||||  |||| ||||||| ||||||||| || |||||||||||||||    
T  23452895 tggtttatatccgctgcgactgttg--agtttatatgcatgcatgttgaatttgaattttgtatgatgatgtagcatctatttcttgaata 23452807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 23460139 - 23460051
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaata 225  Q
    ||||||||||||||||| |||||||  | ||| ||| |||||||||||  |||| ||||||| ||||||||| || |||||||||||||||    
T  23460139 tggtttatatccgctgcgactgttg--agtttatatgcatgcatgttgaatttgaattttgtatgatgatgtagcatctatttcttgaata 23460051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 23464400 - 23464312
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaata 225  Q
    ||||||||||||||||| |||||||  | ||| ||| |||||||||||  |||| ||||||| ||||||||| || |||||||||||||||    
T  23464400 tggtttatatccgctgcgactgttg--agtttatatgcatgcatgttgaatttgaattttgtatgatgatgtagcatctatttcttgaata 23464312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 18226382 - 18226444
Alignment:
Q  212 ctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||| || || ||||| ||||||||| ||||||||||||| || | |||||||    
T  18226382 ctatttcttgaataattgtaatattcgtgtgttttatcgctttaatagaagtatgacgttaca 18226444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 32949031 - 32948965
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| |  ||||||| | ||||| |  ||||||||||||||| |||||||||    
T  32949031 gcgtctatttcttgaatatatgaattattcgtatgtttaattgctttaatagaaatagggcgttaca 32948965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 22881511 - 22881471
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatg 93  Q
    ||||||||| |||| |||||||||||||||||| |||||||    
T  22881511 tggagattttcccacttgtcgggatttggagaatttttatg 22881471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 4e-79; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 15 - 275
Target Start/End: Complemental strand, 40555524 - 40555264
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||| |||| |||||||||| ||||| ||||| ||||    
T  40555524 gattattctagattgtttattttggatttatttatgttgtggagatttgcccatttgtcgggatttgaagaa-ttttatgatgatgtattttgatctcat 40555426  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| || || | || |||||||||||||||||||||||||||| | |||||||| |||| ||||| ||| | |||||||||||| |||||||||    
T  40555425 gacatgtatactattgaggtgtatggtttatatccgctgcaactgttgagaatttttatatatgcctgttgattttgtttttgttgatgacgtggcgtct 40555326  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||    
T  40555325 atttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacac 40555264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 15 - 264
Target Start/End: Original strand, 5770220 - 5770469
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||  ||||||||||||  | |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  5770220 gattattctagattgtttatcctggatttatttatgttgtggagatttacccatttgtcgggatttggagaatttttatgatgttgtattttgatctcat 5770319  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||| ||| ||||| | || | |||| ||||||||||||||||||||| | |||||||| | |||||||| ||||| | |||||||||| |||||||||    
T  5770320 ggcatatatacttttgaggtgtctggtctatatccgctgcaactgttgagaatttttatataagcatgttg-tttggttcttgttgatgacgtggcgtct 5770418  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  5770419 atttcttgaatatttatatgattcatgtgttttatcgctttaatagaaata 5770469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 53 - 275
Target Start/End: Complemental strand, 29217267 - 29217046
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctg 152  Q
    ||||||||| |||| ||||||| |||||||||| |||||||||||||||| |||||||| | |||||||||||||| || ||||||||||||||||||||    
T  29217267 tggagatttacccaattgtcggaatttggagaatttttatgatgttgtattttgatttcttagcatgtatgcttttgaattatatggtttatatccgctg 29217168  T
Q  153 caactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgct 252  Q
    |||||||||| |  |||||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||  |||||||| ||||    
T  29217167 caactgttgaga-attttatacatgcatgttgttttggtttttgttgatgacgtagcgtatatttcttgaatatttatattattcgcgtgttttatcgct 29217069  T
Q  253 ttaatagaaataaggcgttacac 275  Q
    |||||||||||| || |||||||    
T  29217068 ttaatagaaatatggtgttacac 29217046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 21193310 - 21193049
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||| |||||||| | | ||||||||| ||| |  | || |||||| |||||||||||||| || |||||||||||||||  ||||| ||||| ||||     
T  21193310 gattactctagattatctgttttggattgattcatgtttgaagatttacccatttgtcgggacttagagaacttttatgattatgtattttgatatcata 21193211  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtct 213  Q
    ||||||||||||| || |||||||||||||||||||||| |||||||| | |||||||||||||||||||||||| ||||||| |||||| || ||||||    
T  21193210 gcatgtatgctttgaa-gtatatggtttatatccgctgcgactgttgagaatttttatacatgcatgttgttttgaattttgtatgatgacgtagcgtct 21193112  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    ||||||||||||| | ||||||||  |||||||| |||||||||||||||| |||||||||||    
T  21193111 atttcttgaatatatgtattattcgcgtgttttatcgctttaatagaaatagggcgttacaca 21193049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 41213683 - 41213941
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatg-tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  |  ||||||||||||||||||||||||||||||||| |||||||||| ||||| || || ||||    
T  41213683 gattattctagattgtttattctggatttatttatgttatggagatttgcccatttgtcgggatttggagaatttttatgatgatgtattttaatctcat 41213782  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
      ||||||| ||||| | || ||||||||||||| |||||||||||||| | |||||||| |||||||||| ||  | |||||||||||| || ||||||    
T  41213783 tacatgtatacttttgaggtgtatggtttatatctgctgcaactgttgagaatttttatatatgcatgttgatt--ggttttgttgatgacgtagcgtct 41213880  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||||   || ||||| |||||||||||||||| ||| |||||    
T  41213881 atttcttgaatatttatattatttgcgtattttatcgctttaatagaaatagggcattaca 41213941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 46143890 - 46143668
Alignment:
Q  53 tggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| |||||||||||| |||||| ||| |||||| ||||| ||||| ||||| ||||||| ||||| | || ||| |||||||||||||    
T  46143890 tggagatttacccaattgtcgggattttggagaattttgatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatcgtttatatccgct 46143791  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgc 251  Q
    || |||||||| | |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||| ||     
T  46143790 gcgactgttgagaatttttatacatggatgttgttttggattttgttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgttttatcga 46143691  T
Q  252 tttaatagaaataaggcgttaca 274  Q
    ||||||| ||||| |||||||||    
T  46143690 tttaatataaatagggcgttaca 46143668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 5472417 - 5472681
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||| |||||||||| | |||||||||||||||  | ||||||||| ||||||||||||||||||||||| || ||||||| ||||| | ||| |||||    
T  5472417 gattactctagattgtctgttttggatttatttatgtttggagatttacccatttgtcgggatttggagaatttatatgatgatgtatttcgatatcatg 5472516  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtc 212  Q
     ||||||| ||||| |  | |||| | | |||||||||| |||||||  | |||||||||||||||||||||||||||||||  ||||||| || |||||    
T  5472517 acatgtatacttttgagatgtatgatctttatccgctgcgactgttgggaatttttatacatgcatgttgttttggattttgaattgatgacgtagcgtc 5472616  T
Q  213 tatttcttga--atatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||||  |||||||||||||||  ||||||||||| ||||||| ||||| ||||||||||    
T  5472617 tatttcttgaatatatttatattattcgcgtgttttaccgatttaatataaatagggcgttacac 5472681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 50001972 - 50002229
Alignment:
Q  18 tattctagattgtttattttggatttatttacatg-tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggc 116  Q
    ||||||||||| ||| || ||||||||||||  || ||||||||| |||| |||||||||||||||||| ||||||  ||   ||| || || |||||||    
T  50001972 tattctagattatttgttgtggatttatttatgtgctggagatttacccacttgtcgggatttggagaatttttatattgagatatttttatatcatggc 50002071  T
Q  117 atgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatt 216  Q
    |||||| | ||| |  | |||| | | |||||||||| |||||||  | |||||||||||||||||||||||||||||||||||||| ||| || |||||    
T  50002072 atgtatacctttgagatgtatgatatttatccgctgcgactgttgggaatttttatacatgcatgttgttttggattttgttgatgacgtgacgactatt 50002171  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  50002172 tcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 50002229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 33384071 - 33383849
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | | ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||    
T  33384071 gattattctagattgtttattctggatttatttatgtttcggagatttgcccatttgtcggaatttggagaatttttatgatgttgtattttgatctcat 33383972  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||  ||||  |  | |||| | ||||||||||||||||||||| | |||||||| |||| ||||| |||||||||| ||||||| ||  |||||    
T  33383971 gacatgtagactttggagatgtatgatctatatccgctgcaactgttgagaatttttatatatgcttgttg-tttggattttcttgatgacgtaacgtct 33383873  T
Q  214 atttcttgaatatttatattattc 237  Q
    ||||||||||||||||||||||||    
T  33383872 atttcttgaatatttatattattc 33383849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 52397809 - 52397550
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||| | | || ||||||||||    | ||||||||| |||| |||||||||||| |||||| ||| |||||| ||||| ||||  ||||    
T  52397809 gattattctagattatctcttgtggatttattatgttttggagatttacccagttgtcgggattttggagaattttgatgatgatgtatgttgacgtcat 52397710  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
      ||||||||||||| || ||||||||||||||| |||||| |||| || | ||||||||||||||||| |||| | ||||||||||||  || ||||||    
T  52397709 aacatgtatgcttttgaattatatggtttatatctgctgcatctgtcgagaatttttatacatgcatgtcgttt-gaattttgttgatggcgtagcgtct 52397611  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| ||||||||||| |||||||  |||||||| ||||||||||||||||||||||||||    
T  52397610 atttattgaatatttagattattcgcgtgttttatcgctttaatagaaataaggcgttaca 52397550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 37236018 - 37236241
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatat--ccg 149  Q
    ||||| ||| |||||||||||||| ||||||||| |||||| || ||||| || ||| ||||| |||||||| |||| |||||||||| ||||||  |||    
T  37236018 tggaggtttacccatttgtcgggacttggagaacatttatgttgatgtatttttgatatcatgacatgtatg-ttttgaagtatatggcttatatatccg 37236116  T
Q  150 ctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    |||| |||||||| |||||| |||||||||||||||||| |||||||| |||||| || ||||||||||||||||||| | ||||||||  |||||||||    
T  37236117 ctgcgactgttgagattttt-atacatgcatgttgttttagattttgtatgatgacgtagcgtctatttcttgaatatatgtattattcgcgtgttttac 37236215  T
Q  249 cgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||| | |||||||||    
T  37236216 cgctttaatagaaacagggcgttaca 37236241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 77 - 274
Target Start/End: Complemental strand, 18164294 - 18164101
Alignment:
Q  77 tttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacat 176  Q
    ||||||||| |||||||||| ||||| | ||| ||||| ||||||| |||| |  || |||| ||||||||||||||||||||||| | |||||||||||    
T  18164294 tttggagaa-ttttatgatgatgtat-tcgatatcatgacatgtatactttgag-gtgtatgatttatatccgctgcaactgttgagaatttttatacat 18164198  T
Q  177 gcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||||||  ||||||||  ||||||||||||||| |||||||||    
T  18164197 gcatgttgttttgcattttgttgaagatgcggcgtctatttcttgaata-ttatattattcgcgtgttttattgctttaatagaaatagggcgttaca 18164101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 21041941 - 21041682
Alignment:
Q  15 gattattctagattgtttattttggatttattta-catgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||| ||||||| | || |||||||   ||||||||||| ||||||||||||||||||||||| || ||||||| ||||| |||||  |||    
T  21041941 gattattctagatcgtttattct-gacttatttatgttgtggagatttacccatttgtcgggatttggagaatttatatgatgatgtattttgatcacat 21041843  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | || |||| ||||  |  | |||| |||||||||||||| |||||||| |  ||||||| |||||||||| ||| | ||||||||| |  || ||||||    
T  21041842 gacaagtatactttggagatgtatgatttatatccgctgcgactgttgagaaattttatatatgcatgttgatttagtttttgttgaaggcgtagcgtct 21041743  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     |||||||||||||||||||||||  |||||||| ||||||||||||| || |||||||||    
T  21041742 gtttcttgaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 21041682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 20957093 - 20957312
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaactttt-atgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||||||||||||| ||| |||| |||| |||||  ||||| ||||| ||||| |||||||   ||| ||||| | ||||||||||| ||    
T  20957093 tggagattt-cccatttgtcgggacttgaagaatttttcatgattctgtattttgatatcatgacatgtata--tttgaagtacaaggtttatatccact 20957189  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccg 250  Q
    ||||||||||| | |||| |||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||  |||||| | ||    
T  20957190 gcaactgttgagaatttt-atacatgcatattattttggattttgtatgatgatgtggcgtctatttcttgaatatatgtattattcgcgtgtttaatcg 20957288  T
Q  251 ctttaatagaaataaggcgttaca 274  Q
    |||||||||||||| |||||||||    
T  20957289 ctttaatagaaatagggcgttaca 20957312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 50560362 - 50560487
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| ||||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  50560362 acatattgcatcactatttgaaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 50560461  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  50560462 atggtgctagctatagatgcacatgc 50560487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 53 - 232
Target Start/End: Original strand, 9293461 - 9293641
Alignment:
Q  53 tggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    |||||||||  ||| |||||||||||| |||||| ||| |||||||||||| ||||| ||||| |||||||  |||| || |||||| ||||||||||||    
T  9293461 tggagatttatccaattgtcgggattttggagaattttgatgatgttgtattttgatatcatgacatgtatatttttgaattatatgatttatatccgct 9293560  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatat 232  Q
    || |||||||| | |||||||| |||||||||| ||| | ||||||||||||  | |||||||||||||||||||||||||    
T  9293561 gcgactgttgagaatttttatatatgcatgttgatttagtttttgttgatgacatagcgtctatttcttgaatatttatat 9293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 18111027 - 18111152
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  18111027 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 18111126  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  18111127 atggtgctagctatagatgcacatgc 18111152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 29841628 - 29841503
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  29841628 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 29841529  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  29841528 atggtgctagctatagatgcacatgc 29841503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 43255494 - 43255369
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  43255494 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 43255395  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  43255394 atggtgctagctatagatgcacatgc 43255369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 50395908 - 50395783
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  50395908 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 50395809  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  50395808 atggtgctagctatagatgcacatgc 50395783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 75 - 275
Target Start/End: Original strand, 78576 - 78776
Alignment:
Q  75 gatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatac 174  Q
    ||||||||||| ||  |||||| ||||| ||||| ||||||||||||| ||||  |  | |||| | |||||||||||| |||||||| | |||||| |     
T  78576 gatttggagaatttacatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatctatatccgctgccactgttgagaatttttacat 78675  T
Q  175 atgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||| |  ||||||||||||  | | ||||||||||||||||||||||||||||  |||||||| |||||||| ||||||| |||||||||    
T  78676 atgcatgttgtttggatttttgttgatgacatagtgtctatttcttgaatatttatattattcgcgtgttttatcgctttaacagaaatagggcgttaca 78775  T
Q  275 c 275  Q
    |    
T  78776 c 78776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 17607038 - 17606816
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtat-cttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    |||||| || |||||||||||||| |||||||||||| ||| || ||||| |||||| |||||||||||||||||| || |||| |||||||||| ||||    
T  17607038 tggagaattacccatttgtcgggacttggagaactttcatgttgatgtattcttgatatcatggcatgtatgctttgaa-gtatttggtttatattcgct 17606940  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| |||| | || |||||||||||  |||| |||||||| ||| | || ||||||||||||||||||| |   ||||||  |||||||| |    
T  17606939 gcgactgttgagatttct-atgcatgcatgttgaatttgaattttgtttgataacgtagcgtctatttcttgaatatatgctttattcgcgtgttttatc 17606841  T
Q  250 gctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||| |||||||||    
T  17606840 gctttaatagaaatagggcgttaca 17606816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 42681699 - 42681824
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | |||||| || |||||| |||||||||||||||||    
T  42681699 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcgccaaatgttcgaagacatcaatgtcaa 42681798  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  42681799 atggtgctagctatagatgcacatgc 42681824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 264
Target Start/End: Original strand, 40438355 - 40438589
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||| ||||||||  | | ||||||| ||||||||||||||||||| |||| | |||||||||||||| ||||| ||||    
T  40438355 gattattctagattgtttattctggttttatttatgttgcggagattagcccatttgtcgggatttgaagaattgttatgatgttgtattttgatctcat 40438454  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||               |||| | ||||||| ||| ||||| ||| | |||||||| |||  ||||| |||||||||||||||||| ||| |||||    
T  40438455 ggcatg---------------tatgatctatatccactgtaactggtgataatttttatatatgtctgttg-tttggattttgttgatgacgtgacgtct 40438538  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
    ||||||||||||||||||||||||  |||||| | || |||||||||||||    
T  40438539 atttcttgaatatttatattattcgcgtgtttgatcgttttaatagaaata 40438589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 63 - 274
Target Start/End: Original strand, 22837679 - 22837893
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatat-ggtttatatccgctgcaactgtt 160  Q
    |||||||||||||| |||||||||||| |||||  ||||| || ||| |||||||||||||| |||  |||||| | |||||||||||||||| ||||||    
T  22837679 cccatttgtcgggacttggagaactttcatgattatgtatttttgatatcatggcatgtatg-tttcgaagtattttggtttatatccgctgcgactgtt 22837777  T
Q  161 gaaattttttatacatgcatgttgttttggatttt---gttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaat 257  Q
    || ||||| ||||||||||||||||||||||||||   |||||||| || || |||||||||||||||  | ||||||||   ||| |||  ||||||||    
T  22837778 gagatttt-tatacatgcatgttgttttggatttttgagttgatgacgtagcatctatttcttgaataaatgtattattcgcatgtgttattgctttaat 22837876  T
Q  258 agaaataaggcgttaca 274  Q
    |||| || |||||||||    
T  22837877 agaagtagggcgttaca 22837893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 18813528 - 18813653
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  18813528 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 18813627  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  18813628 atggtgctagctatatatgcacatgc 18813653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 15314570 - 15314690
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   ||||| ||| | ||||||||| |||||| |||||||||||||||||    
T  15314570 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggatgatactatgagagttgcaccaaatgttcgaagacatcaatgtcaa 15314669  T
Q  374 atggtgctagctatagatgca 394  Q
    |||||| |||||||| |||||    
T  15314670 atggtgatagctataaatgca 15314690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 10762863 - 10762988
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | | ||| | | |||||| |||||||||||||||||    
T  10762863 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgaaaattgaaacaaatgttcgaagacatcaatgtcaa 10762962  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  10762963 atggtgctagctatagatgcacatgc 10762988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 28566658 - 28566533
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||| | |||||| |||||||||||||||||    
T  28566658 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcatcaaatgttcgaagacatcaatgtcaa 28566559  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||| ||||||||||    
T  28566558 atggtgttagctataaatgcacatgc 28566533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 34686896 - 34687021
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  34686896 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 34686995  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  34686996 atggtgctagctatatatgcacatgc 34687021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 34691434 - 34691559
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||| ||||||||| | |||||| |||||||||| ||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  34691434 acatactgtatcactatttggaaaacaactaaattcaaccctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 34691533  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  34691534 atggtgctagctatatatgcacatgc 34691559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 395
Target Start/End: Complemental strand, 38846165 - 38846044
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||| ||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  38846165 acatactgcatcactatttggaaaacaactaaattcaaccctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 38846066  T
Q  374 atggtgctagctatagatgcac 395  Q
    ||||||||||||||| ||||||    
T  38846065 atggtgctagctatatatgcac 38846044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 12891478 - 12891609
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgt 241  Q
    |||||||| ||||| ||||||||||||||||| |||  |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||   |    
T  12891478 tatatccgttgcaattgttgaaattttttatatatgtctgttgttt-ggattatgttgatgacgtagcgtctatttcttgaatatttatattattcgcat 12891576  T
Q  242 gttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||| |||| |||||||| || |||||||||    
T  12891577 gttttatcgctctaatagaagtagggcgttaca 12891609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 20191792 - 20191653
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| ||||||| |||||| |||||||| | |||||||| |||||||||| ||||| |||| |||  || || ||||||||||||||||||  | | |||    
T  20191792 tatgatttatattcgctgcgactgttgagaatttttatatatgcatgttgatttggtttttattgtagacgtagcgtctatttcttgaataaatgtttta 20191693  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||| ||||||||| ||||||||||||||||||||||||||    
T  20191692 ttcgtgtgttttatcgctttaatagaaataaggcgttaca 20191653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 10695130 - 10695005
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || || ||||||||| |||||| |||   ||||||||| | ||||||||  |||||| |||||||||||||||||    
T  10695130 acatattgcatcactatttggaaagcaactcaattcaatcttaaccaatttggatgatattatgagagttgcactaaatgttcgaagacatcaatgtcaa 10695031  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  10695030 atggtgctagctatagatgcacatgc 10695005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 12713787 - 12713911
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||| ||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  12713787 acatattgcatcactatttggaaaacaactaaat-caatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 12713885  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||| ||||||||||    
T  12713886 atggtgttagctataaatgcacatgc 12713911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 53 - 275
Target Start/End: Complemental strand, 17021669 - 17021446
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| ||| ||||||| || ||||||||| |||||| || ||||| || ||| ||||| |||||||||||  || |||| |||||||||| ||||    
T  17021669 tggagatttacccttttgtcgagacttggagaacatttatgttgatgtatttttgatatcatgacatgtatgcttcgaa-gtatttggtttatatacgct 17021571  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| |||||| || |||||||||||  |||| ||||||| | |||| |  | ||||||||||||||||| | ||||||||  ||||||||||    
T  17021570 gcgactgttgagattttt-atgcatgcatgttgaatttgaattttgtataatgacgcagtgtctatttcttgaatatatgtattattcgcgtgttttacc 17021472  T
Q  250 gctttaatagaaataaggcgttacac 275  Q
    | ||||||||||||| | ||||||||    
T  17021471 gttttaatagaaataggccgttacac 17021446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 51966662 - 51966538
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||| ||||||| ||||||||||   ||||||||| | ||||||||  |||||| |||||||||||||||||    
T  51966662 acatattgcatcactatttggaaagcaactaagttcaatcataaccagtttggatgatattatgagagttgcaca-aatgttcgaagacatcaatgtcaa 51966564  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  51966563 atggtgctagctatagatgcacatgc 51966538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 399
Target Start/End: Complemental strand, 41830984 - 41830865
Alignment:
Q  280 tgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtg 379  Q
    ||||||||| || | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||||||||    
T  41830984 tgcatcactgtttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaaatggtg 41830885  T
Q  380 ctagctatagatgcacatgc 399  Q
    ||||||||| ||||||||||    
T  41830884 ctagctatatatgcacatgc 41830865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 13663343 - 13663218
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   || ||| || | ||||||||| |||||| |||||||||||||| ||    
T  13663343 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtatcatgagagttgcaccaaatgttcgaagacatcaatgtaaa 13663244  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||| |||| |||||    
T  13663243 atggtgttagctataaatgcgcatgc 13663218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 274
Target Start/End: Original strand, 22148521 - 22148683
Alignment:
Q  110 tcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtgg 208  Q
    |||||||||||||| ||| || || |||| ||| |||||||||| |||||||| |||||| ||||||||||||| |||| |||||| | |||||| || |    
T  22148521 tcatggcatgtatgatttgaa-gtttatgatttgtatccgctgcgactgttgagattttt-atacatgcatgttattttagattttatatgatgacgtag 22148618  T
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||| | ||||||||  |||||||| ||| |||||| ||||| |||||||||    
T  22148619 cgtctatttcttgaatatatttattattcgcgtgttttatcgc-ttaatataaatagggcgttaca 22148683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 25091095 - 25090964
Alignment:
Q  143 atatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtg 242  Q
    ||||||||||| |||||||| | |||||||| |||||||||| ||| | ||| ||||| || || ||||||||||||||||||  ||| ||||||  |||    
T  25091095 atatccgctgcgactgttgagaatttttatatatgcatgttgatttagttttcgttgaagacgtagcgtctatttcttgaataaatattttattcgcgtg 25090996  T
Q  243 ttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||| ||||||||||||| || |||||||||    
T  25090995 ttttatcgctttaatagaagtagggcgttaca 25090964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 31618998 - 31619123
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||  |||||||||||||||||    
T  31618998 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgtacgaagacatcaatgtcaa 31619097  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||| ||| ||||||| ||||||||||    
T  31619098 atgatgccagctatatatgcacatgc 31619123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 52309143 - 52309268
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| ||  |||||| |||||||||||||||   ||||||||  | |||| || | |||||| |||||||||| ||||||    
T  52309143 acatattgcatcactatttggaaagcaattaaatttaatcctaaccagtttggatgatattacaagagttacatcaaatgttcgaagacatcattgtcaa 52309242  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  52309243 atggtgctagctatagatgcacatgc 52309268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 52522509 - 52522384
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||||||||||||   |||||| ||||||||||||||||||| |||   |  || ||| | ||||||||| |||||| |||||||||||||| ||    
T  52522509 acatattgcatcactatttagaaaacaactaaattcaatcctaaccactttggattgtagtatgagagttgcaccaaatgttcgaagacatcaatgttaa 52522410  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  52522409 atggtgctagctatatatgcacatgc 52522384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 63 - 274
Target Start/End: Original strand, 38035628 - 38035839
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatat--ccgctgcaactgt 159  Q
    |||||||||||||| |||||||||||| |||||  ||||| || | | ||||||||||||| |||   |   |||||||||||||  | ||||| |||||    
T  38035628 cccatttgtcgggacttggagaactttcatgattatgtatttttggtatcatggcatgtatacttg--attcatatggtttatatatctgctgcgactgt 38035725  T
Q  160 tgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaat 257  Q
    ||| ||||   || |||||||||||  |||||||||||| |||| | || |||||||||||||||||| || | ||||||  | ||||||||||||||||    
T  38035726 tgagattt---atgcatgcatgttgaatttggattttgtatgataacgtagcgtctatttcttgaataattgtcttattcgcgagttttaccgctttaat 38035822  T
Q  258 agaaataaggcgttaca 274  Q
    |||||||||||||||||    
T  38035823 agaaataaggcgttaca 38035839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 4891438 - 4891563
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  4891438 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 4891537  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  4891538 atggtgctagctatagatgcacatgc 4891563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 29187049 - 29186924
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  29187049 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 29186950  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  29186949 atggtgctagctatagatgcacatgc 29186924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 33361047 - 33361172
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  33361047 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 33361146  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  33361147 atggtgctagctatagatgcacatgc 33361172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 19601215 - 19601094
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttgga-ttttgt-tgatgatgtggcgtctatttcttgaatatttatattattcat 239  Q
    |||||||||||| |||||||| |||||  || ||||||||||| |||||| |||||| |||||| |  ||||||||||||||||||| | ||||||||      
T  19601215 tatatccgctgcgactgttgagatttt--atgcatgcatgttgatttggaattttgtatgatgacgcagcgtctatttcttgaatatatgtattattcgc 19601118  T
Q  240 gtgttttaccgctttaatagaaat 263  Q
    ||||||||  ||||||||||||||    
T  19601117 gtgttttatagctttaatagaaat 19601094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 27672821 - 27672677
Alignment:
Q  132 gtatatggtttatat--ccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatt 227  Q
    |||||||||||||||  ||||||| | |||||| || ||  || |||||||||||  |||| ||||||| |||||| || ||||||||||||||||||      
T  27672821 gtatatggtttatatatccgctgcgaatgttgagatctt--atgcatgcatgttgaatttgaattttgtatgatgacgtagcgtctatttcttgaataaa 27672724  T
Q  228 tatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    | | ||||||  ||||||||||||||||||||||||| |||||||||    
T  27672723 tgttttattcgcgtgttttaccgctttaatagaaatagggcgttaca 27672677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 41963869 - 41963746
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||||||||||||  ||||||| |||||||||||| ||| ||||||   |  |||||| |  |||||||| ||| || |||||||||||||||||    
T  41963869 acatattgcatcactatttcaaaaacaactaaattcaatcataatcagtttggattgtattatga--gttgcaccaaattttcgaagacatcaatgtcaa 41963772  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| |  |||||| ||||||||||    
T  41963771 atggtaccggctatatatgcacatgc 41963746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 21223677 - 21223612
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||  |||||||| |||||||| ||||||||||||| ||  ||||||||    
T  21223677 cgtctatttcttgaatatttgaattattcacgtgttttatcgctttaatagaagtagagcgttaca 21223612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 391
Target Start/End: Complemental strand, 26432631 - 26432514
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||||| |||| | |||||||||||||| |||| |||   || |||||| | ||||||||| ||| |   |||  ||||| |||||    
T  26432631 acatactgcatcactattggtaaaataactaaattcaatcctgaccaatttggatggtattataagagttgcaccaaatatacaaaggaatcaaagtcaa 26432532  T
Q  374 atggtgctagctatagat 391  Q
    ||||| ||||||||||||    
T  26432531 atggttctagctatagat 26432514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 36358450 - 36358590
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatat 232  Q
    |||||||||||||||||   |||||||| |||||| || |||||||||||  |||| ||||||| |||||| || || |||||||||||||||  | |||    
T  36358450 tatggtttatatccgctatgactgttgagattttt-atgcatgcatgttgaatttgaattttgtatgatgacgtagcatctatttcttgaataaatgtat 36358548  T
Q  233 tattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||   |||||||  ||||||||||||||| || ||||||    
T  36358549 tattcgcatgttttattgctttaatagaaatagggtgttaca 36358590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 48339633 - 48339758
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||||||| ||||||| |||   |  |||| | | ||||||||| ||| |||||||||||  | |||||    
T  48339633 acatactgcatcactatttggaaaacaactaaattcaattctaaccaatttggattgtattttgagagttgcaccaaatatttgaagacatacaggtcaa 48339732  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||  ||||||||||| |||| |||||    
T  48339733 attatgctagctatatatgcccatgc 48339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 20764200 - 20764246
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaacca 320  Q
    ||||||||||||||||||||||||| | |||||||||||||| ||||    
T  20764200 acatactgcatcactattggaaaaataactaaattcaatcctgacca 20764246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 25092955 - 25092904
Alignment:
Q  68 ttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatg 119  Q
    |||||||||||||||||| || ||||||| ||||| ||||| ||||||||||    
T  25092955 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatg 25092904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 16243694 - 16243629
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||| ||||||||  | |||||| | ||||||||||| || || ||||||    
T  16243694 cgtctatttcttgaatatttgtattattcgcgcgttttatcactttaatagaagtagggtgttaca 16243629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 3e-73; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 51 - 274
Target Start/End: Original strand, 15006691 - 15006913
Alignment:
Q  51 tgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgc 150  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||  ||||||| || ||||||||||||||||    
T  15006691 tgtggagatttgcccatttgtcgggatttcgagaatttttatgatgttgtattttgatctcatggcatgtagacttttaaggtgtatggtttatatccgc 15006790  T
Q  151 tgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccg 250  Q
    |||||||||| | | |||||||| |||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||| ||    
T  15006791 tgcaactgttaagaatttttatatatgcctgttg-tttggattttgttgatgacgtagcgtctatttcttgaatatttatattattcccgtgttttatcg 15006889  T
Q  251 ctttaatagaaataaggcgttaca 274  Q
    |||||||||||||| |||||||||    
T  15006890 ctttaatagaaatagggcgttaca 15006913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 12311029 - 12311288
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||| |||||||| | | ||||||||||||| |  | ||||||||| | |||||||||||| ||||||||| ||||||||  ||||| ||||| |||||    
T  12311029 gattactctagattatctgttttggatttattcatgtttggagatttacgcatttgtcgggacttggagaacatttatgattatgtattttgatatcatg 12311128  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtcta 214  Q
    ||||||||||||| || |||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||| | || |||||||    
T  12311129 gcatgtatgctttgaa-gtatatggtttatatccgctgcgactgttgagaatttttatacatgcatgttgctttggattttgttgataacgtagcgtcta 12311227  T
Q  215 tttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||| | ||||||||  |||||||| |||||||||||||||| ||||||||||    
T  12311228 tttcttgaatatatgtattattcgcgtgttttatcgctttaatagaaatatggcgttacac 12311288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 34965078 - 34964822
Alignment:
Q  18 tattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggc 116  Q
    |||||||||||||||||| ||||||||||||  | |||||||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||| |||||||    
T  34965078 tattctagattgtttattctggatttatttatgttgtggagattttcccatttgtcgggatttagagaatttttatgatgatgtattttgatctcatggc 34964979  T
Q  117 atgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatt 216  Q
    |||||| ||||| | || ||||||||||||| ||||||| |||||| | |||||| | |||| ||||| |||||| ||||||||||| | ||||||||||    
T  34964978 atgtatactttttaggtgtatggtttatatctgctgcaaatgttgagaatttttaaatatgcctgttg-tttggactttgttgatgacgaggcgtctatt 34964880  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    | |||||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  34964879 ttttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 34964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 77 - 276
Target Start/End: Complemental strand, 19670621 - 19670424
Alignment:
Q  77 tttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacat 176  Q
    ||||||||| |||||||||| ||||| | ||| || |||||||||||||||  | || |||||||||||||||||||||||||||| | |||||||| ||    
T  19670621 tttggagaatttttatgatgatgtat-tcgatctcttggcatgtatgctttggaggtgtatggtttatatccgctgcaactgttgagaatttttatatat 19670523  T
Q  177 gcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  |||||||| |||||||||||||||| |||||||||||    
T  19670522 gcatgttgttttggattttgttgatgatctggcgtctatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaatagggcgttacaca 19670424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 29603686 - 29603465
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctg 152  Q
    |||||| ||||||| |||||||||||||||||| ||||||  ||   ||  ||||| ||||| |||||||||| ||||| | |||||||||||||||||     
T  29603686 tggagaattgcccacttgtcgggatttggagaatttttatattgagatactttgatatcatgacatgtatgctcttaaattgtatggtttatatccgcta 29603587  T
Q  153 caactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgct 252  Q
    | |||||||| | |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||| ||||| ||||    
T  29603586 cgactgttgagaatttttatacatgcatgttgttttggatttttttgatgacgtgacgtctatttcttgaatatttatattattcgtgtattttatcgct 29603487  T
Q  253 ttaatagaaataaggcgttaca 274  Q
    |||||||||||| |||| ||||    
T  29603486 ttaatagaaatagggcggtaca 29603465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 29162939 - 29163201
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | |||||| ||||||||||| ||| |||||| |||| || || |||| ||||| ||||| ||||    
T  29162939 gattattctagattgtttattctggatttatttatgttgtggagttttgcccatttttcgagatttgaagaatttatacgatgatgtattttgatctcat 29163038  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||| ||||  |  | |||| | |||||||||||  |||||||| | |||||||| ||||||||||||| |  ||||||||||||||| ||||||    
T  29163039 gacatgtatactttggagatgtatgatctatatccgctgtgactgttgagaatttttatatatgcatgttgtttggatttttgttgatgatgtagcgtct 29163138  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||||||  ||||||||||    
T  29163139 atttcttgaatatttatgttattcacgtgttttatcgctttaatagaaatagagcgttacaca 29163201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 53 - 275
Target Start/End: Complemental strand, 22846232 - 22846012
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctg 152  Q
    ||||||||| ||||||||||| || || ||||||||||||||| |||||| ||| | ||||| |||||||||||   | |||||||||||||||||||||    
T  22846232 tggagatttacccatttgtcgagactttgagaacttttatgatattgtattttgttatcatgacatgtatgcttg--atgtatatggtttatatccgctg 22846135  T
Q  153 caactgttgaaattttttatacatgcatgttgttttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgc 251  Q
    | ||| |||| | |||| ||||||||||||||||||||||||| || ||||| || |||| |||||||||||||||||||||||||  | |||||| |||    
T  22846134 cgactattgagaatttt-atacatgcatgttgttttggattttttttgatgacgtagcgtttatttcttgaatatttatattattcgcgggttttatcgc 22846036  T
Q  252 tttaatagaaataaggcgttacac 275  Q
    ||||||||||||| ||||||||||    
T  22846035 tttaatagaaatagggcgttacac 22846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 25649395 - 25649144
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatg 119  Q
    |||||||| | | |||||||||||||  ||||| |||||||| ||||| |||||||| |||||||||||||||| || ||||| ||||| | |||  |||    
T  25649395 tctagattatctgttttggatttatt--catgttggagatttacccatgtgtcgggacttggagaacttttatgttgatgtattttgatattatgatatg 25649298  T
Q  120 tatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttct 219  Q
    |||||||| |||||||||||||| |||||||||| ||| |||| |||||| || |||||||| |||||||| |||||||||||   || |||||||||||    
T  25649297 tatgcttt-aaagtatatggtttgtatccgctgcgactattgagattttt-atgcatgcatggtgttttggtttttgttgatggcatgacgtctatttct 25649200  T
Q  220 tgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||||||||||||  || ||||| | |||||||| ||||| ||||||||||    
T  25649199 tgaatatttatattattcgcgtattttatcactttaatataaatagggcgttacac 25649144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 31469657 - 31469795
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  31469657 tatgatttatatccgctgcaaccgttgagaatttttatacatgcatgttgttttggattttgttgatgacgtggcgtctatttcttgaata-ttatatta 31469755  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  |||||||| || ||||||||||||| |||||||||    
T  31469756 ttcgcgtgttttatcgttttaatagaaatagggcgttaca 31469795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 22595723 - 22595944
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctg 152  Q
    ||||||||| ||||||||||||| ||||||||| || ||||||| ||||| |||||  |||| ||||||| ||||  |  | |||| |||||||| ||||    
T  22595723 tggagatttacccatttgtcggggtttggagaatttatatgatgatgtattttgatcacatgacatgtatactttggagatgtatgatttatatctgctg 22595822  T
Q  153 caactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgct 252  Q
    | |||||||| |  ||||||| |||||||||| ||| | ||||||||| || || ||||||||||||||||||||||||||||||  |||||||| ||||    
T  22595823 cgactgttgagaaattttatatatgcatgttgatttagtttttgttgaagacgtagcgtctatttcttgaatatttatattattcgcgtgttttatcgct 22595922  T
Q  253 ttaatagaaataaggcgttaca 274  Q
    ||||||||| || |||||||||    
T  22595923 ttaatagaagtagggcgttaca 22595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 33540257 - 33540515
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcat 113  Q
    ||||| |||||||| | | ||||||||||||| |  | ||||||||| |||| ||||||||| |||||||||||| ||| || ||||| || ||| ||||    
T  33540257 gattactctagattatctgttttggatttattcatgtttggagatttacccaattgtcgggacttggagaacttt-atgttgatgtatttttgatatcat 33540355  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
     ||||| |||||||| || |||||||||||||||||||||||| ||||| |  | |||||||||||| | ||||||||||||||||||||  |  | |||    
T  33540356 agcatgcatgcttttgaattatatggtttatatccgctgcaaccgttgaga-atgttatacatgcatatcgttttggattttgttgatgacataacatct 33540454  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||| | |||||||||  ||||||| | |||||||||||||| | |||||||    
T  33540455 atttcttgaatatatgtattattcacatgttttatcactttaatagaaatatgacgttaca 33540515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 19852329 - 19852190
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||||||||||| |||||| | ||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  19852329 tatggtttatatccgctgcaattgttgagaatttttatacattcatgttggtttggattttgttgatgacatggcgtctatttcttaaatatttatatta 19852230  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||| ||||||||   |||||||||||| || |||||||||    
T  19852229 ttcgtgtgtttttttgctttaatagaagtagggcgttaca 19852190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 22468132 - 22468314
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  22468132 gattattctagattgtttattctggatttatttatgttgtggagatttgtccatttgtcgggatttggagaatttttatgatgttgtattttgatctcat 22468231  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt 197  Q
    | ||||||  ||||  |  |  ||| | ||||||||||||||||||||| | |||||||| |||| ||||| ||||||||||||    
T  22468232 gccatgtagactttagagatgcatgatctatatccgctgcaactgttgagaatttttatatatgcctgttg-tttggattttgt 22468314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 33978257 - 33978383
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  33978257 acatactgcatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 33978356  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  33978357 aatggtgttagctatagatgcacatgc 33978383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 13457674 - 13457549
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  13457674 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 13457575  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  13457574 atggtgctagctatagatgcacatgc 13457549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 249196 - 249322
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  249196 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 249295  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  249296 aatggtgttagctatagatgcacatgc 249322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 130 - 274
Target Start/End: Original strand, 17085688 - 17085832
Alignment:
Q  130 aagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttg-atgatgtggcgtctatttcttgaatattt 228  Q
    ||||||||| ||| |||||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| |||| ||  |||||||||||||||||| |    
T  17085688 aagtatatgatttgtatccgctgcgactgttgagattttt-atacatgcatgttattttggattttgttggatgacgtaacgtctatttcttgaatatat 17085786  T
Q  229 atattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     ||||||||  |||||||| |||||||||||||||| |||||||||    
T  17085787 ttattattcgcgtgttttatcgctttaatagaaatagggcgttaca 17085832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 1074225 - 1074100
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  1074225 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 1074126  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  1074125 atggtgctagctatatatgcacatgc 1074100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 17938807 - 17938932
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  17938807 acatactacatcactatttggaaaacaactaaattcaatcctaaccagttttgattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 17938906  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  17938907 atggtgctagctatatatgcacatgc 17938932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 18599948 - 18599823
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  18599948 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 18599849  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  18599848 atggtgctagctatatatgcacatgc 18599823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 25532550 - 25532675
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || ||||||||||||||||| |||||   ||||||||| | ||||||||| ||||||||||||||||||||||||    
T  25532550 acatattgcatcactatttggaaagcaactaaattcaatcctaactagtttggatgatattatgagagttgcaccaaatgtttgaagacatcaatgtcaa 25532649  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||| ||||| ||||||||||    
T  25532650 atggtgctatctatacatgcacatgc 25532675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 12580757 - 12580633
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || ||||||   ||||||||| |||||| ||||||||||||||||    
T  12580757 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattat--gagttgcaccaaatgttcgaagacatcaatgtca 12580660  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  12580659 aatggtgttagctatagatgcacatgc 12580633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 276 - 399
Target Start/End: Complemental strand, 22374812 - 22374689
Alignment:
Q  276 atactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaat 375  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||||    
T  22374812 atactgcatcactatttggaaaacaattaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaaat 22374713  T
Q  376 ggtgctagctatagatgcacatgc 399  Q
    ||||||||||||| ||||||||||    
T  22374712 ggtgctagctatatatgcacatgc 22374689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 399
Target Start/End: Complemental strand, 11946423 - 11946306
Alignment:
Q  282 catcactattggaaaaacagctaaattcaatcctaaccagttt-atttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgc 380  Q
    |||||||||| ||||| || ||||||||||||||||||||||| | ||| |||||| | ||||||||| |||||| ||||||||||||||||||||||||    
T  11946423 catcactatttgaaaaccaactaaattcaatcctaaccagtttgaattg-tattatgagagttgcaccaaatgttcgaagacatcaatgtcaaatggtgc 11946325  T
Q  381 tagctatagatgcacatgc 399  Q
    |||||||| ||||||||||    
T  11946324 tagctatatatgcacatgc 11946306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 7222029 - 7222154
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||| |||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  7222029 acatattgcttcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 7222128  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  7222129 atggtgctagctatatatgcacatgc 7222154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 276
Target Start/End: Complemental strand, 6092563 - 6092417
Alignment:
Q  130 aagtatatggtttata-tccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatattt 228  Q
    |||||||||||||||| |||||||| |||||||| | || | || ||||||||||||||||   ||||||||||| || |||||||||||||||||||      
T  6092563 aagtatatggtttataatccgctgcgactgttgagaattat-atgcatgcatgttgttttgacctttgttgatgacgtagcgtctatttcttgaatataa 6092465  T
Q  229 atattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
     ||||||||  |||||||| |||||||||||||||| |||||||||||    
T  6092464 ttattattcgcgtgttttatcgctttaatagaaatagggcgttacaca 6092417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 7830056 - 7830194
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||||||| |||||||| |||||| || |||||||||||  |||| ||||||| ||||||||| |||||||||||||||||| || | |||    
T  7830056 tggtttatatccgctgcgactgttgagattttt-attcatgcatgttgaatttgaattttgtatgatgatgtagcgtctatttcttgaataattgtctta 7830154  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||| || ||||||||||||||||||||||| || ||||||    
T  7830155 ttcgtgagttttaccgctttaatagaaatagggtgttaca 7830194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 16374016 - 16373877
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| |||||||||||||| ||| ||||    ||||||| ||||||||| ||||||| |||||||| || ||  |||||| ||||||||||||| |||||    
T  16374016 tatgttttatatccgctgcgacttttgaggaattttatatatgcatgttattttggaatttgttgaagacgtcacgtctaattcttgaatatttgtatta 16373917  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  |||||||| ||||||||||||||||||||||||||    
T  16373916 ttcgcgtgttttatcgctttaatagaaataaggcgttaca 16373877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 280 - 394
Target Start/End: Complemental strand, 33322409 - 33322295
Alignment:
Q  280 tgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtg 379  Q
    |||||||||||| | ||| || ||||||| ||||||||||||||    ||||||||| | ||||||||| |||||| |||||||||||||||||||||||    
T  33322409 tgcatcactatttggaaagcaactaaattgaatcctaaccagttgggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaaatggtg 33322310  T
Q  380 ctagctatagatgca 394  Q
    |||||||||||||||    
T  33322309 ctagctatagatgca 33322295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 1080553 - 1080428
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| |||||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  1080553 acatagtgcatcactatttgaaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 1080454  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| | |||||| ||||||||||    
T  1080453 atggtgttggctatatatgcacatgc 1080428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 275 - 396
Target Start/End: Original strand, 34320378 - 34320499
Alignment:
Q  275 catactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaa 374  Q
    |||| |||||||||||| | ||| || |||||||||||||||||||||||   || | |||| | ||||||||| |||||| ||||||||||||||||||    
T  34320378 catattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatggtcttatgagagttgcaccaaatgttcgaagacatcaatgtcaaa 34320477  T
Q  375 tggtgctagctatagatgcaca 396  Q
    ||||||||| ||||||||||||    
T  34320478 tggtgctagatatagatgcaca 34320499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 399
Target Start/End: Original strand, 2520454 - 2520573
Alignment:
Q  280 tgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtg 379  Q
    ||||||||||||   |||||| |||||||||||| ||||||||||   |  |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  2520454 tgcatcactatttataaaacaactaaattcaatcataaccagtttggattgtattatgacagttgcaccaaatgtttgaagacatcaatgtcaaatggtg 2520553  T
Q  380 ctagctatagatgcacatgc 399  Q
     | |||||| ||||||||||    
T  2520554 ttggctatatatgcacatgc 2520573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 34855240 - 34855365
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| ||| |||||||||||||    
T  34855240 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaatacatcaatgtcaa 34855339  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||| ||||||||||| ||||||||||    
T  34855340 atgatgctagctatatatgcacatgc 34855365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 274
Target Start/End: Original strand, 941175 - 941315
Alignment:
Q  133 tatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttata 231  Q
    |||||||||||||||||||||  ||||||| | |||  ||||||||| |||||||||  |||||| |||||| || |||| || ||||||||||||||||    
T  941175 tatatggtttatatccgctgcggctgttgagaattt--atacatgcacgttgttttgatttttgtatgatgacgtagcgtataattcttgaatatttata 941272  T
Q  232 ttattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||   ||||||| ||||||||||||| || |||||||||    
T  941273 ttattcgcatgttttatcgctttaatagaattagggcgttaca 941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 274 - 393
Target Start/End: Complemental strand, 7219826 - 7219707
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | || ||| |||||||||||||||||||||||   |  |||| | | ||||||||| |||||| |||||||||||||||||    
T  7219826 acatactgcatcactatttggaagacaactaaattcaatcctaaccagtttggattgtattttgagagttgcaccaaatgttcgaagacatcaatgtcaa 7219727  T
Q  374 atggtgctagctatagatgc 393  Q
    || |||||||||||| ||||    
T  7219726 attgtgctagctatatatgc 7219707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 17858513 - 17858651
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggat-tttgttgatgatgtggcgtctatttcttgaatatttatatt 233  Q
    |||| |||||||||||||| |||||||| | |||||||| |||||||||||||  ||| |||||||  || || || | |||||||||||||||| ||||    
T  17858513 tatgatttatatccgctgcgactgttgagaatttttataaatgcatgttgttt--gatatttgttgcagacgtagcatgtatttcttgaatatttgtatt 17858610  T
Q  234 attcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||  ||||||||  ||||||||||||||| |||||||||    
T  17858611 attcgcgtgttttattgctttaatagaaatagggcgttaca 17858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 274
Target Start/End: Original strand, 16889923 - 16890091
Alignment:
Q  110 tcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtg 207  Q
    ||||| ||||||||||||  || ||||||||||||||||||||| |||||||| |  |||||| |||||||||||  |||| ||||||| |||||| ||     
T  16889923 tcatgacatgtatgctttcgaattatatggtttatatccgctgcgactgttgaga-cttttatgcatgcatgttgaatttgaattttgtatgatgacgta 16890021  T
Q  208 gcgtctatttcttg---aatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     |||||||||||||   ||||| | ||||||||  |||||||| || ||||||||||||| |||||||||    
T  16890022 acgtctatttcttgaataatatatttattattcgcgtgttttatcgttttaatagaaatagggcgttaca 16890091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 22364380 - 22364518
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| |||||||||||| |||||||| ||||||  | |||||||||||  |||| ||||||| ||||||  | ||||||||||||||||||| |  ||||    
T  22364380 tggtatatatccgctgcgactgttgagatttttg-tgcatgcatgttgaatttgaattttgtatgatgacctagcgtctatttcttgaatatatgcatta 22364478  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  ||||||||||||||||||||||||| |||||||||    
T  22364479 ttcgcgtgttttaccgctttaatagaaatagggcgttaca 22364518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 1219862 - 1219987
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  1219862 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 1219961  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  1219962 atggtgctagctatagatgcacatgc 1219987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 4423669 - 4423794
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| |||||| |||   |  ||||||   ||||||||| |||||| ||| |||| ||||||||    
T  4423669 acatattgcatcactatttggaaaacaactaaattcaatcataaccaatttggattgtattatgtgagttgcaccaaatgttcgaaaacattaatgtcaa 4423768  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  4423769 atggtgctagctatatatgcacatgc 4423794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 9980010 - 9979885
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  9980010 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 9979911  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  9979910 atggtgctagctatagatgcacatgc 9979885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 11517358 - 11517233
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||||||||||||||||||||| | |||||||||||||| |||| |||   || |||||| | ||||||||| ||| ||  |||  ||||| |||||    
T  11517358 acatactgcatcactattggaaaaataactaaattcaatcctgaccaatttggatggtattataagagttgcaccaaatattcaaaggaatcaaagtcaa 11517259  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| ||||||||||||| ||||||    
T  11517258 atggttctagctatagatgtacatgc 11517233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 14888899 - 14888774
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| || |||| |||| |||||||| |||||||||||| ||| ||||||   |  |||||| | | ||||||| ||| || |||||||||||||||||    
T  14888899 acatattggatcagtatttgaaaaacaactaaattcaatcataaacagtttggattgtattatgagatttgcaccaaattttcgaagacatcaatgtcaa 14888800  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  14888799 atggtgctagctatatatgcacatgc 14888774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 19852404 - 19852327
Alignment:
Q  26 attgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtat 102  Q
    ||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  19852404 attgtttattttggatttatttatattttggagatttacccatttgtcgggatttggagaatttttatgatgatgtat 19852327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 24445265 - 24445390
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  24445265 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 24445364  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  24445365 atggtgctagctatagatgcacatgc 24445390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 17375929 - 17375997
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    ||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  17375929 gcgtctatttcttaaatattaatattattcgtgtgttttatcgctttaatagaaatatggcgttacaca 17375997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 274
Target Start/End: Original strand, 17791275 - 17791445
Alignment:
Q  110 tcatggcatgtatgcttttaaagtatatggtttatat-----ccgctgcaactgttgaaattttttatacatgcatgttgttttgga-ttttgtt-gatg 202  Q
    ||||| ||||||||||||| || ||||||||||||||     | ||||| |||||||| |||| | || |||||||||||||||||| ||||||| ||||    
T  17791275 tcatgacatgtatgcttttgaattatatggtttatatataatctgctgcgactgttgagatttat-atgcatgcatgttgttttggaattttgtttgatg 17791373  T
Q  203 atgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||  |||||||||||||||||| |   ||||||   ||||||| |||||||||||||||| ||| |||||    
T  17791374 atgtaacgtctatttcttgaatatatgccttattcgcttgttttatcgctttaatagaaatagggcattaca 17791445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 275
Target Start/End: Complemental strand, 21621188 - 21621016
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttat--atccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tga 200  Q
    ||||| ||||| |||||||| ||||  ||||| ||||||||  ||||||||| ||||| || |||||| |||||||||||||||||| |||||||| |||    
T  21621188 ttgatatcatgacatgtatg-ttttggagtatttggtttatgtatccgctgcgactgtcgagattttt-atacatgcatgttgttttagattttgtatga 21621091  T
Q  201 tgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||| ||  |||||||||||| ||||| | | ||||||  | |||||| || ||||||||||||| |||| |||||    
T  21621090 tgacgtaacgtctatttcttaaatatatgttttattcgcgagttttatcgttttaatagaaatagggcgatacac 21621016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 15275009 - 15275068
Alignment:
Q  340 agttgcacctaatgtttgaagacatcaatgtcaaatggtgctagctatagatgcacatgc 399  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| || |||||||    
T  15275009 agttgcaccaaatgttcgaagacatcaatgtcaaatggtgctagctatatattcacatgc 15275068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 25782577 - 25782644
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||||||||||||||||||| ||||||||| |||||||| | ||||||||||| || |||||||||||    
T  25782577 cgtctatttcttgaatatttgtattattcacgtgttttatcactttaatagaagtagggcgttacaca 25782644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 25917711 - 25917575
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttgga-ttttgt-tgatgatgtggcgtctatttcttgaatatttatattattcat 239  Q
    |||||||||||| |||||||| |||||  || ||||||  |||||||| | |||||| |||||| || ||||||| ||||||||||| | ||||||||      
T  25917711 tatatccgctgcgactgttgagatttt--atgcatgcacattgttttgaaattttgtatgatgacgtagcgtctaattcttgaatatatttattattcgc 25917614  T
Q  240 gtgttttaccgctttaatagaaataaggcgttacacata 278  Q
    |||||||| | ||||||||||| || |||||||||||||    
T  25917613 gtgttttatcactttaatagaattagggcgttacacata 25917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 14150534 - 14150468
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| | |||||||| |||| |||| |||||||||||||||| |||||||||    
T  14150534 gcgtctatttcttgaatatatttattattcgtgtgctttatcgctttaatagaaatagggcgttaca 14150468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 23219010 - 23218873
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| |||||||||||||| |||||||| | ||||| || |||||||||| ||||| |||| |||  || || ||||||||||||||||||  |  ||||    
T  23219010 tatgatttatatccgctgcgactgttgagaatttttctatatgcatgttgatttggtttttattgtagacgtagcgtctatttcttgaataaatgcatta 23218911  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    |||   | ||||| || ||||||||||||| |||||||    
T  23218910 ttcgcattttttatcggtttaatagaaatagggcgtta 23218873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 25369583 - 25369723
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttg-ttgatgatgtggcgtctatttcttgaatatttatat 232  Q
    ||||||||||||||||||| |||||||| | ||||||| |||||||||||  |||| |||||| ||||||| ||  | |||||||||||||||  | |||    
T  25369583 tatggtttatatccgctgcgactgttgaga-tttttatgcatgcatgttgaatttgaattttgtttgatgacgtatcatctatttcttgaataaatgtat 25369681  T
Q  233 tattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||   |||||||  ||||||||||||||| || ||||||    
T  25369682 tattcgcatgttttattgctttaatagaaatagggtgttaca 25369723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 21927385 - 21927524
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||| |  |||  ||||||| |||||| || ||||||||||||||||||| |   |||    
T  21927385 tggtttatatccgctgcaattgttgaga-tttttatacatgcatgtcgaatttaaattttgtatgatgacgtagcgtctatttcttgaatatatgcttta 21927483  T
Q  235 ttcatgtg-ttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  | | ||||| |||||||||||||||| |||||||||    
T  21927484 ttcgcgagtttttatcgctttaatagaaatagggcgttaca 21927524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 23025029 - 23025120
Alignment:
Q  182 ttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||| |||| || ||| |||||| ||||| |||||| |||||||||  |||||||| |||||||||||||||| || ||||||    
T  23025029 ttgttttggattttattgaagacgtgacgtctaattctttaatatt-atattattcgcgtgttttatcgctttaatagaaatagggtgttaca 23025120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 16131286 - 16131147
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctatttcttgaatatttatat 232  Q
    |||| ||||||||| |||| |||||||| | |||||||| |||||||||||||  |||||||   ||| || || ||||||||||||||||||  |   |    
T  16131286 tatgatttatatcccctgcgactgttgagaatttttatatatgcatgttgttt--gattttgatgtgaagacgtagcgtctatttcttgaataaatgctt 16131189  T
Q  233 tattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||  |||||||| | |||||||||||||| || ||||||    
T  16131188 tattcgcgtgttttatccctttaatagaaatagggtgttaca 16131147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 274
Target Start/End: Original strand, 15081047 - 15081136
Alignment:
Q  186 tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| ||||||| ||||||||| || |||||||||||||||||  ||||||||   |||||||  ||||||||||||||| || ||||||    
T  15081047 tttgaattttgtatgatgatgtagcatctatttcttgaatattattattattcgcatgttttattgctttaatagaaatagggtgttaca 15081136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 9192195 - 9192155
Alignment:
Q  197 ttgatgatgtggcgtctatttcttgaatatttatattattc 237  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  9192195 ttgaagatgtgacgtctatttcttgaatatttatattattc 9192155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 21411514 - 21411631
Alignment:
Q  109 ttcatggcatgtatgcttttaaagtata-tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatg 205  Q
    |||||| |||||||||||  |||||||  ||||||||||||||||| ||||| || | ||||||| |||||||||||  |||| ||||||| |||||| |    
T  21411514 ttcatgacatgtatgcttc-aaagtattctggtttatatccgctgcgactgtagaga-tttttatgcatgcatgttgaatttgaattttgtatgatgacg 21411611  T
Q  206 tggcgtctatttcttgaata 225  Q
    | || |||||||||||||||    
T  21411612 tagcatctatttcttgaata 21411631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 15274893 - 15274943
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    |||||||||||||||||| |  ||||| |||||||||||| ||||||||||    
T  15274893 acatactgcatcactatttgggaaacaactaaattcaatcataaccagttt 15274943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 30043752 - 30043794
Alignment:
Q  282 catcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    |||||||||| | |||||| |||||||||||||||||||||||    
T  30043752 catcactatttggaaaacaactaaattcaatcctaaccagttt 30043794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 4174893 - 4174945
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
    ||||||||||||||||| || ||||||||  ||||||||  ||||||||||||    
T  4174893 cgtctatttcttgaataattctattattcgcgtgttttattgctttaatagaa 4174945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 4230522 - 4230574
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
    ||||||||||||||||| || ||||||||  ||||||||  ||||||||||||    
T  4230522 cgtctatttcttgaataattctattattcgcgtgttttattgctttaatagaa 4230574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 11269890 - 11270013
Alignment:
Q  275 catactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaa 374  Q
    ||||||||||||||||||| |||| | |||||||| ||||| |||| |||   || |||||| | ||||||||| ||| |   |||  ||||| ||||||    
T  11269890 catactgcatcactattgg-aaaataactaaattctatcctgaccaatttggatggtattataagagttgcaccaaatatccaaaggaatcaaagtcaaa 11269988  T
Q  375 tggtgctagctatagatgcacatgc 399  Q
    |||| ||||| ||||||| ||||||    
T  11269989 tggttctagcaatagatgtacatgc 11270013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 5e-72; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 47470357 - 47470618
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaactttt-atgatgttgtatcttgatttca 112  Q
    ||||||||||||||||||| | ||||||||||||  | |||||||||| ||||||||||| ||||||||||| |||| |||||| ||||| ||||| |||    
T  47470357 gattattctagattgtttactctggatttatttatgttgtggagattttcccatttgtcgagatttggagaattttttatgatgatgtattttgatatca 47470456  T
Q  113 tggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtc 212  Q
    || ||||||| ||||| | || ||||||||||||||||||| |||||||| | |||||||| |||||||||| ||||| |||||||||||| ||||||||    
T  47470457 tgacatgtatacttttgaggtgtatggtttatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgatgacgtggcgtc 47470556  T
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||||||  |||||||| | |||||||||||||| |||||||||    
T  47470557 tatttcttgaatatttatattattcgcgtgttttatcactttaatagaaatatggcgttaca 47470618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 13596044 - 13596303
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | |||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||    
T  13596044 gattattctagattgtttattctggatttatttatgttgtggagatttgcccatttatcgggatttggagaatttttatgatgttgtattttgatctcat 13596143  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||  ||||  |  | |||| | |||||||| |||||||||||||| |||||||| |||| |||||||| ||||||||||||||| || |||||     
T  13596144 ggcatgtagactttggagatgtatgatctatatccgatgcaactgttgaaaatttttatatatgcctgttgttt-ggattttgttgatgacgtagcgtcg 13596242  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| ||||  |||||||| |||||||| ||||||| |||||||||    
T  13596243 atttcttgaatatttatatgattcgcgtgttttatcgctttaaaagaaatagggcgttaca 13596303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 19557480 - 19557223
Alignment:
Q  15 gattattctagattgtttattttggatttatttac-atgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| |||||||||||   |||||||||||| ||||||| | ||||||||||||| |||||||||| ||||| ||||| ||||    
T  19557480 gattattctagattgtttattctggatttatttctgatgtggagatttacccattttttgggatttggagaatttttatgatgatgtattttgatctcat 19557381  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
     |||||||| |||| |  || ||||||||||||||||||||| |||||| | |||| ||  |||| |||||||| | |||||||||||||  ||||||||    
T  19557380 agcatgtatactttgag-gtgtatggtttatatccgctgcaattgttgagaatttt-atgtatgcctgttgtttag-attttgttgatgacatggcgtct 19557284  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  19557283 atttcttgaatatttatattattcatgtgttttatcgctttaatagaaatagggcgttaca 19557223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 58 - 274
Target Start/End: Original strand, 18241254 - 18241471
Alignment:
Q  58 atttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaac 156  Q
    |||| |||| |||||||||||| ||| || ||| |||||| ||||| ||||  |||| |||||||||||||| || |||||| |||||||||||||||||    
T  18241254 atttacccagttgtcgggattttggaaaattttgatgatgatgtatgttgacatcatagcatgtatgcttttgaattatatgatttatatccgctgcaac 18241353  T
Q  157 tgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaa 256  Q
    |||||| | ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  18241354 tgttgagaatttttatacatgcatgttgttttcgattttgttgatgatgtagcgtctatttcttgactatttatattattcacgtgttttatcgctttaa 18241453  T
Q  257 tagaaataaggcgttaca 274  Q
    |||||||| ||| |||||    
T  18241454 tagaaatagggcattaca 18241471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 50224180 - 50224440
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| || |||||||||  | ||||||||||| |||||||||||||||||||||| ||||||| || ||||| ||||| ||||    
T  50224180 gattattctagattgtttattctgaatttatttatgttgtggagatttgtccatttgtcgggatttggagaatttttatgttgatgtattttgatctcat 50224279  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    || |||||| ||||| | || ||| |||||||||||||||||||||||| | ||| |||| |||| || || ||| | | | ||||| || |||||||||    
T  50224280 ggtatgtatacttttgaggtgtattgtttatatccgctgcaactgttgagaatttatatatatgcttgatgatttcgttatagttgacgacgtggcgtct 50224379  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||||||||| |||||||||    
T  50224380 atttcttgaatatttttattattcgcgtgttttatcgctttaatagaaatagggcgttaca 50224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 10239465 - 10239724
Alignment:
Q  15 gattattctagattgtttattttggatttattt-acatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||||||||||||||||||||||    ||||||||||| |||| ||||||| ||||| |||| ||||||| || ||||| ||||  ||||    
T  10239465 gattattctagattgtttattttggatttatttgtgttgtggagatttacccaattgtcggaatttgaagaatttttatgttgatgtattttgacctcat 10239564  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||| ||||| |||| |||||||||||||||||||||| ||  | | |||||||| |||| ||||  |||| |  ||||||||||||||||||||    
T  10239565 ggcatgtatacttttgaagtgtatggtttatatccgctgcaacggtatagaatttttatatatgcttgtt-atttgaacattgttgatgatgtggcgtct 10239663  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||| |||||||||||||||  ||||||||  ||||||||||||||| |||| ||||    
T  10239664 atttcttggatatttatattattcgcgtgttttattgctttaatagaaatagggcgctaca 10239724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 33 - 274
Target Start/End: Original strand, 41258424 - 41258663
Alignment:
Q  33 attttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaag 132  Q
    |||||||||||||| |  | ||||||||| |||||||||||||| |||||  ||||| |||||  ||||| ||||| |||||||||||||| |||| |||    
T  41258424 attttggatttattcatgtttggagatttacccatttgtcgggacttgga--actttcatgattatgtat-ttgatatcatggcatgtatg-ttttgaag 41258519  T
Q  133 tatatggtttatatccgctgcaactgttga-aattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttat 230  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | |    
T  41258520 tatatggtttatatccgctgcgactgttgagaatttttaatacatgcatgttgttttggattttgtatgatgatgtagcgtctatttcttgaatatatgt 41258619  T
Q  231 attattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    | |||||  |||||||| || ||||||||||||| ||| |||||    
T  41258620 actattcgcgtgttttatcgttttaatagaaatagggcattaca 41258663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 77 - 274
Target Start/End: Original strand, 13449102 - 13449296
Alignment:
Q  77 tttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacat 176  Q
    ||||||||| |||||||||| ||||| | ||| ||||| ||||||| ||||| | || ||| |||||||||||||||||||||||| | |||||||||||    
T  13449102 tttggagaa-ttttatgatgatgtat-tcgatctcatgacatgtatacttttgaggtgtatagtttatatccgctgcaactgttgagaatttttatacat 13449199  T
Q  177 gcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||  |||||||| |||||||||||||||| |||||||||    
T  13449200 gcatgttgttttggattttgttgatgacgtgacgtctatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 13449296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 91 - 274
Target Start/End: Complemental strand, 5407243 - 5407062
Alignment:
Q  91 atgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttgg 190  Q
    |||||| ||||| ||||| ||||||||||||| |||| |  || |||||||||||||||||||||||||||| | | |||||||||||||||||||||||    
T  5407243 atgatgatgtat-ttgatctcatggcatgtatactttgag-gtgtatggtttatatccgctgcaactgttgagaatatttatacatgcatgttgttttgg 5407146  T
Q  191 attttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||| |||| || |||||||||||| ||||||||||||||||| ||  |||||||| | |||||||||||||| |||||||||    
T  5407145 attttattgaagacgtggcgtctattacttgaatatttatattactcgcgtgttttatcactttaatagaaatagggcgttaca 5407062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 18274923 - 18274701
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcatgtatgcttttaaagtatatgg-tttatatccgc 150  Q
    ||||||||| ||||||| |||||| |||||||||||||||| || |||| | ||||| ||||| |||||||||||| ||  ||||||| ||||||||| |    
T  18274923 tggagatttacccatttttcgggacttggagaacttttatgttgatgtacttttgatatcatgacatgtatgctttgaat-tatatgggtttatatccac 18274825  T
Q  151 tgcaactgttgaaattttttatacatgcatgttgttttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    ||| |||||||| |||||| ||||||||||||| |||||||||||||| ||||| || || |||||||||||||||| | |||| |||  |||||||| |    
T  18274824 tgcgactgttgagattttt-atacatgcatgttattttggattttgtttgatgacgtagcatctatttcttgaatatatgtattgttcgcgtgttttatc 18274726  T
Q  250 gctttaatagaaataaggcgttaca 274  Q
     |||||||||||||| |||||||||    
T  18274725 actttaatagaaatagggcgttaca 18274701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 264
Target Start/End: Original strand, 41919273 - 41919521
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | ||||| ||||||||||||||||||||||  |||  || ||||||| ||||| ||||| | ||    
T  41919273 gattattctagattgtttattctggatttatttatgttgtggatatttgcccatttgtcgggattttaagattttatatgatgatgtatattgatcttat 41919372  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||| |||  |||  |  | |||| | ||||||| |||||||| |||| | |||| ||| |||| |||||||| ||||||||||||||| || || |||    
T  41919373 gacatctatattttggagatgtatgatctatatccactgcaacttttgagaatttt-atatatgcctgttgttt-ggattttgttgatgacgtagcatct 41919470  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  41919471 atttcttgaatatttatattattcgcgtgttttatcgctttaatagaaata 41919521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 15520168 - 15520293
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  15520168 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 15520267  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  15520268 atggtgctagctatagatgcacatgc 15520293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 280 - 399
Target Start/End: Complemental strand, 35713073 - 35712954
Alignment:
Q  280 tgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtg 379  Q
    |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||||||||    
T  35713073 tgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaaatggtg 35712974  T
Q  380 ctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||    
T  35712973 ctagctatagatgcacatgc 35712954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 10260293 - 10260167
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  10260293 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 10260194  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  10260193 aatggtgttagctatagatgcacatgc 10260167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 19590165 - 19590291
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| |||    || |||||| | ||||||||| |||||| ||||||||||||||||    
T  19590165 acatactgcatcactatttggaaaaacaactaaattcaatcctaacctgttctaatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 19590264  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    |||||||||||||||||||||||||||    
T  19590265 aatggtgctagctatagatgcacatgc 19590291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 21564162 - 21564288
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  21564162 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 21564261  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  21564262 aatggtgttagctatagatgcacatgc 21564288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 24078362 - 24078236
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  24078362 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 24078263  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  24078262 aatggtgttagctatagatgcacatgc 24078236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 26925232 - 26925106
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  26925232 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 26925133  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  26925132 aatggtgttagctatagatgcacatgc 26925106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 43331683 - 43331809
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  43331683 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 43331782  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  43331783 aatggtgttagctatagatgcacatgc 43331809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 741247 - 741122
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||| ||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  741247 acatacttcatcactatttggaaaacaactaaattcaatcataaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 741148  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  741147 atggtgctagctatagatgcacatgc 741122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 34 - 264
Target Start/End: Original strand, 7966641 - 7966875
Alignment:
Q  34 ttttggatttatttacatg-tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaa 131  Q
    |||||||||||||  |||| ||||||||| |||||||||||||| || ||||||||||||| || ||||| || ||| |||||||||||||||||| |||    
T  7966641 ttttggatttatt--catgatggagatttacccatttgtcgggaattagagaacttttatgttgatgtatttttgatatcatggcatgtatgctttgaaa 7966738  T
Q  132 gtatatggtttatatccgctgcaactgttgaaatttttt----atacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatat 226  Q
      ||||||||||||| |||||| |||||||| |||||||    |||| ||  | |||||||||||||||| | |||| || |||||||||||||||||||    
T  7966739 c-atatggtttatattcgctgcgactgttgagattttttttttatacgtgtttcttgttttggattttgtattatgacgtagcgtctatttcttgaatat 7966837  T
Q  227 ttatattattcatgtgttttaccgctttaatagaaata 264  Q
     |   ||||||  |||||||| ||||||||||||||||    
T  7966838 atgctttattcgcgtgttttatcgctttaatagaaata 7966875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 40621466 - 40621591
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| ||||||||||||||||||| |||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  40621466 acatattgcatcactatttggaaaacaactaaattcaatcctaaccaatttggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 40621565  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    | ||||||||||||||||||||||||    
T  40621566 acggtgctagctatagatgcacatgc 40621591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 104 - 274
Target Start/End: Complemental strand, 42706846 - 42706675
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgtt--ga 200  Q
    ||||| |||||||||||||| |||| ||||||||| |||||||||||||| |||| ||| |||| | || ||||||||||| |||||||||||| |  ||    
T  42706846 ttgatatcatggcatgtatg-ttttgaagtatatgatttatatccgctgcgactgatgagatttct-atgcatgcatgttgattttggattttggttcga 42706749  T
Q  201 tgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||| || ||||||||||||||||||| | ||||||||  |||||||| |||||||||||||||| |||||||||    
T  42706748 tgacgtagcgtctatttcttgaatatatttattattcgcgtgttttatcgctttaatagaaatagggcgttaca 42706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 51451750 - 51451876
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||| |||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  51451750 acatactccatcactatttggaaaaacaactaaattcaatcctaacaagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 51451849  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  51451850 aatggtgttagctatagatgcacatgc 51451876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 17698326 - 17698451
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||| ||||||||    
T  17698326 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatgaatgtcaa 17698425  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  17698426 atggtgctagctatatatgcacatgc 17698451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 35496481 - 35496356
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||| |||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||| ||||||    
T  35496481 acatattgcgtcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattataagagttgcaccaaatgttcgaagacatcattgtcaa 35496382  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  35496381 atggtgctagctatagatgcacatgc 35496356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 39745815 - 39745690
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||||||||||||| |||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  39745815 acatactgcatcactatttggaaaacaactaaattcaatcctaactagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 39745716  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  39745715 atggtgctagctatatatgcacatgc 39745690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 12729428 - 12729297
Alignment:
Q  143 atatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtg 242  Q
    ||||||||||| |||||||| | |||||||| |||||||||| ||| | ||||||||| || || ||||||||||||| ||||||||||||||||  |||    
T  12729428 atatccgctgcgactgttgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttaaatatttatattattcgcgtg 12729329  T
Q  243 ttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||| ||||||||||||| || |||||||||    
T  12729328 ttttatcgctttaatagaagtagggcgttaca 12729297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 13627372 - 13627497
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||||||||| |||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  13627372 acatactgcatcactatttggaaaacaactaaattcaatccaaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 13627471  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| ||||||||| ||||||||||    
T  13627472 atggttctagctatatatgcacatgc 13627497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 19832355 - 19832230
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| ||||||  ||||||||||||||||    
T  19832355 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcaaagacatcaatgtcaa 19832256  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| || |||||||    
T  19832255 atggtgctagctatatatacacatgc 19832230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 34057533 - 34057408
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||| ||| |||||| |||||||||||||||||    
T  34057533 acatactgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgtaccaaatgttcgaagacatcaatgtcaa 34057434  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  34057433 atggtgctagctatatatgcacatgc 34057408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 53341730 - 53341855
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||| ||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  53341730 acatactgtatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 53341829  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||||||||||    
T  53341830 atggtgctggctatatatgcacatgc 53341855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 19624060 - 19624317
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||||||||||||| ||||  ||||||||| |   | |||||||||  |||| ||||||||||||||||  || ||||||| ||||| ||||| | |||    
T  19624060 gattattctagattgattatgctggatttatgt---tatggagattttaccatatgtcgggatttggagattttatatgatgatgtatattgatcttatg 19624156  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttg--atgatgtggcgtc 212  Q
     |||||||  |||  |  | |||| ||||||||| |||| ||||||||    ||||||| ||||||||||||| | |||||| ||  | || || |||||    
T  19624157 acatgtatattttggagatgtatgatttatatccactgcgactgttgatgaattttatatatgcatgttgttt-gaattttgatgtgaagacgtagcgtc 19624255  T
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||| |||||| ||||| ||| |||||||||||||||| |||||||||    
T  19624256 tatttcttgaatatttatgttattcgtgtgtattatcgctttaatagaaatagggcgttaca 19624317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 1943816 - 1943941
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||||| ||   || |||| | | ||||||||| ||||||||||||||||||||| ||    
T  1943816 acatactgcatcactatttgaaaaacaactaaattcaatcttaaccagcttgaatggtattgtgagagttgcaccaaatgtttgaagacatcaatgttaa 1943915  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    | | ||||||||||| ||||||||||    
T  1943916 acgctgctagctataaatgcacatgc 1943941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 14569433 - 14569296
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| ||||||| |||||| |||||||| |  ||||||| |||||||||||||  || |||||||| || || |||||||||||||||||||||||||||    
T  14569433 tatgatttatattcgctgcgactgttgagaaattttatatatgcatgttgttt--gaatttgttgaagacgtagcgtctatttcttgaatatttatatta 14569336  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||| ||||| ||| ||||||||||||| || || ||||||    
T  14569335 ttcgtgtgtattatcgctttaatagaagtagggtgttaca 14569296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 17739360 - 17739480
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || ||||||||||| |||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  17739360 acatattgcatcactatttggaaagcaactaaattcaatactaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 17739459  T
Q  374 atggtgctagctatagatgca 394  Q
    ||||| ||| |||||||||||    
T  17739460 atggtactaactatagatgca 17739480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 12246299 - 12246519
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatat-ggtttatatccgct 151  Q
    ||||||||| ||| ||||| |||| |||| |||| |||||| || ||||| |||||| |||| |||||||||||  || |||| | ||||||||||||||    
T  12246299 tggagatttacccttttgttgggacttggcgaacatttatgttgatgtattttgatt-catgacatgtatgcttcgaa-gtattttggtttatatccgct 12246396  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| |||||  || |||||||||||  |||| ||||||| |||||| || ||||||||||||||||||| |   ||||||  | ||||||||    
T  12246397 gcgactgttgagatttt--atgcatgcatgttgaatttgaattttgtatgatgacgtagcgtctatttcttgaatatatgctttattcgcgagttttacc 12246494  T
Q  250 gctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||| || ||||||    
T  12246495 gctttaatagaaatagggtgttaca 12246519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 14830480 - 14830355
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||  |||||||||||||||||    
T  14830480 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgtacgaagacatcaatgtcaa 14830381  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||| ||||||||||| ||||||||||    
T  14830380 atgatgctagctatatatgcacatgc 14830355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 23478228 - 23478353
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||| ||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  23478228 acatattgcatcgctatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 23478327  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||||||||||    
T  23478328 atggtgctggctatatatgcacatgc 23478353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 28136024 - 28135899
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| |||||| | |||||||||||| ||||||||||   |  |||| | | ||||||||| |||||| ||||||| |||||||||    
T  28136024 acatattgcatcactatttgaaaaaaaactaaattcaatcataaccagtttggattgtattttgagagttgcaccaaatgttcgaagacaccaatgtcaa 28135925  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  28135924 atggtgctagctatatatgcacatgc 28135899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 387
Target Start/End: Complemental strand, 33503956 - 33503843
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| ||||| |||||||||||    
T  33503956 acatactgcatcactattttgaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagaaatcaatgtcaa 33503857  T
Q  374 atggtgctagctat 387  Q
    ||||||||||||||    
T  33503856 atggtgctagctat 33503843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 47721028 - 47720903
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||| |||||| |||   || |||||  | |||||||   |||||| |||||||||||||||||    
T  47721028 acatactgcatcactatttggaaaacaactaaattcaatcataaccaatttgaatggtattacgagagttgcattaaatgttcgaagacatcaatgtcaa 47720929  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||| ||||||||||||||||||||||    
T  47720928 atgatgctagctatagatgcacatgc 47720903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 55999666 - 55999541
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||| ||||||||    
T  55999666 acatactgcatcactatttgaaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacattaatgtcaa 55999567  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    || || |||| | || ||||||||||    
T  55999566 attgttctagttgtatatgcacatgc 55999541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 7187989 - 7188212
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg---atttcatggcatgtatgcttttaaagtatatggtttatatccg 149  Q
    |||| |||| ||| ||||| |||| |||||||||||| ||| || ||||||||    || |||||| ||||||||||| || ||||||| ||||||||||    
T  7187989 tggatatttacccttttgttgggacttggagaacttt-atgttgatgtatcttttgaatatcatggaatgtatgctttgaa-gtatatgctttatatccg 7188086  T
Q  150 ctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgtttta 247  Q
    |||  |||| ||| |||||| || ||||||||||| |||||||||||||| ||||| ||  |||||||||||||||||  | |||||||   ||||||||    
T  7188087 ctgtgactgatgagattttt-atgcatgcatgttgattttggattttgttcgatgacgtaacgtctatttcttgaatacatgtattatttgcgtgtttta 7188185  T
Q  248 ccgctttaatagaaataaggcgttaca 274  Q
    ||||| ||||||||||| || ||||||    
T  7188186 ccgctgtaatagaaatagggtgttaca 7188212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 14867491 - 14867269
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| |||||||   |||||||||||| |||||  ||||| || ||| |||||||||||||||||| ||  |||||| ||| ||||||||    
T  14867491 tggagattt-cccaattgtcggttcttggagaactttcatgattatgtatttttgatatcatggcatgtatgctttgaat-tatatgatttgtatccgct 14867394  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttg---ttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    || ||| ||||    ||| |||||||||||||||||||||||||    ||||||| |||||||| ||||||||||||  | ||||||||   |||||||     
T  14867393 gcgactattgatgagttt-atacatgcatgttgttttggatttttggattgatgacgtggcgtcaatttcttgaataaatgtattattcgcatgttttat 14867295  T
Q  249 cgctttaatagaaataaggcgttaca 274  Q
     ||||||||||||||| |||||||||    
T  14867294 tgctttaatagaaatagggcgttaca 14867269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 41168061 - 41168195
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||||||||||| |||| |||||| | |||||| ||||||||||||||  |||||||||| | |||||| || |||||||||||||||||| ||   |||    
T  41168061 tggtttatatccactgcgactgttaagattttt-atacatgcatgttgaatttggattttctatgatgacgtagcgtctatttcttgaataattgcctta 41168159  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgt 270  Q
    |||| |||||||| |||||||||||||||| |||||    
T  41168160 ttcacgtgttttatcgctttaatagaaatagggcgt 41168195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 5274713 - 5274588
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||| | |||||||||||| ||||    
T  5274713 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgctcgaagacatcaatatcaa 5274614  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| | |||||| ||||||||||    
T  5274613 atggtgttggctatatatgcacatgc 5274588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 7645078 - 7644953
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||| |  |||||||   |  |||||| | ||||||||| |||||| ||||| |||||||| ||    
T  7645078 acatactgcatcactatttggaaaacaactaaattcaatcatctccagtttggattgtattatgagagttgcaccaaatgttcgaagatatcaatgtgaa 7644979  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||| ||||    
T  7644978 atggtgctagctatatatgcatatgc 7644953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 13814990 - 13815130
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||||||||||||||||||||||||| ||| || || |||||||||||  |||| ||||||| |||||| || || ||| |||||||||||  | |||||    
T  13814990 tggtttatatccgctgcaactgttgagattatt-atgcatgcatgttgaatttgaattttgtatgatgacgtagcatctgtttcttgaataaatgtatta 13815088  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||  |||| |||||||||||||||||||| || ||||||||    
T  13815089 ttcgcgtgtattaccgctttaatagaaatagggtgttacaca 13815130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 39715468 - 39715343
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  39715468 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttgaataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 39715369  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  39715368 atggtgctagctatagatgcacatgc 39715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 54332611 - 54332486
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| || ||| |||   |  |||||| | ||||||||| |||||| ||||| |||||||||||    
T  54332611 acatattgcatcactatttggaaaacaactaaattcaatcttatccattttggattgtattatgagagttgcaccaaatgttcgaagatatcaatgtcaa 54332512  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
     |||||||||||||| ||||||||||    
T  54332511 ttggtgctagctatatatgcacatgc 54332486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 54366200 - 54366332
Alignment:
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgt 241  Q
    |||||||||| | |||||||| | |||||||| |||||||||| ||| | ||||||||| || || ||||||||||||||||||| |   ||||||  ||    
T  54366200 tatatccgctacgactgttgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttgaatatatgctttattcgcgt 54366299  T
Q  242 gttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||  |||||||||||||||  ||||||||    
T  54366300 gttttattgctttaatagaaatagagcgttaca 54366332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 274
Target Start/End: Complemental strand, 38762777 - 38762670
Alignment:
Q  167 ttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataag 266  Q
    ||||| ||||||||||| |||||||||||||   ||| ||| || ||||||||||||||||||||| ||||  || ||||| | |||||||||||||| |    
T  38762777 ttttacacatgcatgttattttggattttgtgattgacgtgacgactatttcttgaatatttatatcattcgcgtattttatcactttaatagaaatagg 38762678  T
Q  267 gcgttaca 274  Q
    ||||||||    
T  38762677 gcgttaca 38762670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 274
Target Start/End: Original strand, 12136362 - 12136567
Alignment:
Q  69 tgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatttt 168  Q
    |||||| | |||||||| || ||||||| ||||| ||||| ||||| ||||||| ||||  |  | |||| ||||||| |  ||| ||||||||    ||    
T  12136362 tgtcggtacttggagaatttatatgatgatgtattttgatctcatgacatgtatactttggagatgtatgatttatatacattgcgactgttgaggactt 12136461  T
Q  169 ttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggc 268  Q
    ||||| |||||||||||||||  ||||  ||| || || |||||||||||||| |||  | | ||||||  |||||||| |||||||||||||||| |||    
T  12136462 ttatatatgcatgttgttttgatttttaatgaagacgtagcgtctatttcttggataaatgttttattcgcgtgttttatcgctttaatagaaatatggc 12136561  T
Q  269 gttaca 274  Q
    ||||||    
T  12136562 gttaca 12136567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 15216265 - 15216378
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||| |||||| |||| |||||||  | ||||||| || |||| |||||||||||||||||| || ||||||| ||||| || || ||||    
T  15216265 gattattctagattttttattctggacttatttatgttgtggagactttcccaattgtcgggatttggagaatttatatgatgatgtattttaatctcat 15216364  T
Q  114 ggcatgtatgcttt 127  Q
    ||||||||| ||||    
T  15216365 ggcatgtatacttt 15216378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 350 - 399
Target Start/End: Complemental strand, 28121102 - 28121053
Alignment:
Q  350 aatgtttgaagacatcaatgtcaaatggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28121102 aatgttcgaagacatcaatgtcaaatggtgctagctatagatgcacatgc 28121053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 52800363 - 52800488
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| ||  ||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  52800363 acatattgcatcaccatttggaaagcaattaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 52800462  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  52800463 atggtgctagctatagatgcacatgc 52800488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 274
Target Start/End: Original strand, 5373189 - 5373399
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagta-tatggtttatatccgctgcaactgttg 161  Q
    ||||| ||| ||||||||||||| || ||||||| ||||| ||||| ||||| |||||||  ||||  || | |||| |||||||||||||| || ||||    
T  5373189 cccatatgttgggatttggagaatttatatgatgatgtattttgatctcatgacatgtata-ttttggagaagtatgatttatatccgctgcgaccgttg 5373287  T
Q  162 aaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
    | | |||||||| ||||||||   ||||| ||||||||| || || |||||| ||| |||||||| |   ||||||  || ||||| |||||||||||||    
T  5373288 agaatttttatatatgcatgtatgtttgg-ttttgttgaagacgtagcgtctgttttttgaatatatgctttattcgcgtattttatcgctttaatagaa 5373386  T
Q  262 ataaggcgttaca 274  Q
    ||| || ||||||    
T  5373387 atatggtgttaca 5373399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 36856421 - 36856541
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| ||||| |||||| | |||||| ||||||||||||||||| ||||||  |  |||||| | ||||||||  ||| || |||||||||||||| ||    
T  36856421 acatattgcataactatttggaaaacaactaaattcaatcctaactagtttagattgtattatgagagttgcactaaattttcgaagacatcaatgttaa 36856520  T
Q  374 atggtgctagctatagatgca 394  Q
    ||| ||||||||||| |||||    
T  36856521 atgatgctagctatatatgca 36856541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 12370653 - 12370720
Alignment:
Q  207 ggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||| |||||||| ||||||||  |||||||| |||||||||||||||| |||||||||    
T  12370653 ggcgtctatttctggaatatttgtattattcgcgtgttttatcgctttaatagaaatagggcgttaca 12370720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 15853428 - 15853566
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgtt-ttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||||||| |||||||| |||||| || ||||||||||    ||| ||||||| |||||| || || |||||||||||||||| ||  |||    
T  15853428 tggtttatatccgctgcgactgttgagattttt-atgcatgcatgttaaagttgaattttgtatgatgacgtagcatctatttcttgaatatatacttta 15853526  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||  | |||||| |||||||||||||||| |||||||||    
T  15853527 ttcgcgagttttatcgctttaatagaaatagggcgttaca 15853566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 274
Target Start/End: Complemental strand, 24236964 - 24236830
Alignment:
Q  141 ttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt---tgatgatgtggcgtctatttcttgaatatttatattattc 237  Q
    ||||||||||||| |||||||||   ||||||| |||||||||||||  |||||||    ||| |  || ||||||||||||||||||  | | ||||||    
T  24236964 ttatatccgctgcgactgttgaataattttatatatgcatgttgttt--gattttggatgtgaaggcgtagcgtctatttcttgaataaatgttttattc 24236867  T
Q  238 atgtgttttaccgctttaatagaaataaggcgttaca 274  Q
      |||||||| ||||||||||||||||||||||||||    
T  24236866 gcgtgttttatcgctttaatagaaataaggcgttaca 24236830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 34198231 - 34198359
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttata--tccg 149  Q
    ||||||||| |||||||||||||| |||||||||||| |||||  ||||| || ||| |||||||||||||||||   |  |||||||||||||  ||||    
T  34198231 tggagattt-cccatttgtcgggacttggagaactttcatgattatgtattttcgatatcatggcatgtatgcttg--atttatatggtttatatatccg 34198327  T
Q  150 ctgcaactgttgaaattttttatacatgcatgt 182  Q
    |||| |||||||| | ||||||| |||||||||    
T  34198328 ctgcgactgttgaga-tttttatgcatgcatgt 34198359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 274
Target Start/End: Original strand, 15116449 - 15116585
Alignment:
Q  139 gtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattatt 236  Q
    ||||||||||||||| |||||||| | ||||||| |||||||||||  |||| ||||||| |||||| || || |||||||||||||||  | |||||||    
T  15116449 gtttatatccgctgcgactgttgaga-tttttatgcatgcatgttgaatttgaattttgtctgatgacgtagcatctatttcttgaataaatgtattatt 15116547  T
Q  237 catgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |   |||| ||  ||||||||||||||| || ||||||    
T  15116548 cgcatgttgtattgctttaatagaaatagggtgttaca 15116585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 17214051 - 17214124
Alignment:
Q  202 gatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||| ||||||||||||||||| ||  ||||||| ||| ||||| |||||||||||||||| | ||||||||    
T  17214051 gatgtgacgtctatttcttgaataattgcattattcgtgtattttatcgctttaatagaaatatgacgttacac 17214124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 33489878 - 33489753
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||||||||||   |||||||||||||| |||| |||   ||  ||||| | ||||||||| ||| |   |||  ||||| |||||    
T  33489878 acatactgcatcactattggaaaaatgactaaattcaatcctgaccaatttggatggcattataagagttgcaccaaatatccaaaggaatcaaagtcaa 33489779  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| ||||||||||||| ||||||    
T  33489778 atggttctagctatagatgtacatgc 33489753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 19824648 - 19824759
Alignment:
Q  168 tttatacatgcatgttgttttggatttt--gttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataa 265  Q
    ||||| ||||| |||||||||| | |||  |||||||| || ||||||| ||||||||||| | |||||||   |||||||| ||||||||||||| ||     
T  19824648 tttatgcatgcttgttgttttgaaattttggttgatgacgtagcgtctaattcttgaatatatttattatttgcgtgttttatcgctttaatagaattag 19824747  T
Q  266 ggcgttacacat 277  Q
    || |||||||||    
T  19824748 ggtgttacacat 19824759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 393
Target Start/End: Complemental strand, 43018083 - 43017964
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||||||||||   |||||||||||||| |||| |||   ||  ||||| | ||||||||| ||| |   |||  ||||| |||||    
T  43018083 acatactgcatcactattggaaaaatgactaaattcaatcctgaccaatttggatggcattataagagttgcaccaaatatccaaaggaatcaaagtcaa 43017984  T
Q  374 atggtgctagctatagatgc 393  Q
    ||||| ||||||||||||||    
T  43017983 atggttctagctatagatgc 43017964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 28121149 - 28121103
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaacca 320  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  28121149 acatattgcattactatttgaaaaacagctaaattcaatcctaacca 28121103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 28972413 - 28972463
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||    
T  28972413 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagttt 28972463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 31113665 - 31113600
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||| ||||||||   |||||||  ||||||||||||||| |||||||||    
T  31113665 gcgtctatttcttgaatattt-tattattcgcatgttttattgctttaatagaaatagggcgttaca 31113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 261
Target Start/End: Original strand, 19083018 - 19083211
Alignment:
Q  69 tgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaag-tatatggtttatatccgctgcaactgttgaaattt 167  Q
    ||||||||||||||||  || |||| || ||||| ||||||||||| |||||||  ||||  || | |||| | |||||| ||||| | | ||||    |    
T  19083018 tgtcgggatttggagattttatatggtgatgtatgttgatttcatgacatgtatattttttgagatgtatgttatatatctgctgcgatttttgaggaat 19083117  T
Q  168 tttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
    |||||| | ||||||||||| | | | | |||| |||||  || |||||||||||||||||  |||||||  |||||||| |||||||||||||    
T  19083118 tttatataggcatgttgtttcgaaatattttgaagatgtaacgcctatttcttgaatatttgcattattcgcgtgttttatcgctttaatagaa 19083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 12350870 - 12350935
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||| || ||||||||  |||||||| | ||||||||||| || || ||||||    
T  12350870 cgtctatttcttgaataattgtattattcgcgtgttttatcactttaatagaagtatggtgttaca 12350935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 13047565 - 13047618
Alignment:
Q  219 ttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    |||||||||||||||||||  |||||||| ||| ||||||||| |||| |||||    
T  13047565 ttgaatatttatattattcgcgtgttttatcgcgttaatagaagtaagacgtta 13047618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 17378413 - 17378473
Alignment:
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||   |||||||| |||||||| ||||||||||||||||  ||||||||    
T  17378413 tatttcttgaatattgg-attattcacgtgttttatcgctttaatagaaatagcgcgttaca 17378473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 33240282 - 33240218
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||| ||||||||   |||||||  |||||||| |||||| |||||||||    
T  33240282 cgtctatttcttgaatattt-tattattcgcatgttttattgctttaattgaaatagggcgttaca 33240218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 12338883 - 12338947
Alignment:
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||| |||| || |||||||   |||||||| ||||||||||||| || |||||||||    
T  12338883 gtctatttcttaaataattgtattattggcgtgttttatcgctttaatagaagtagggcgttaca 12338947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 99258 - 99034
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctg 152  Q
    ||||||||| |||| |||||||||||| ||||| |||||||||||| ||| | | | ||||||||||||| ||||| | || |||| |||||||||||||    
T  99258 tggagatttacccaattgtcgggatttagagaatttttatgatgttatatttcgttatcatggcatgtatacttttgaggtgtatgatttatatccgctg 99159  T
Q  153 caactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgct 252  Q
    |||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  99158 caactgttgagaatttttatacatgcatgttattttggatttttttgatgatgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgct 99059  T
Q  253 ttaatagaaataaggcgttacacat 277  Q
    |||||||||||| ||||||||||||    
T  99058 ttaatagaaatagggcgttacacat 99034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 15 - 279
Target Start/End: Complemental strand, 84573 - 84309
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  84573 gattattctagattgtttattttgaatttatttacattgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttaatttcat 84474  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||| ||||| | ||| | || |||| |||||||||||| ||||| |||| | |||||||| |||||| |   ||||| |||| |||| || |   |||||    
T  84473 ggcgtgtatacatttgaggtgtatgatttatatccgctacaacttttgagaatttttatatatgcatatcaatttggttttttttgacgacgcaacgtct 84374  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacacatac 279  Q
    |||| |||||||||||||||||||| || ||||| |||||||||||||||| ||||||||| ||||    
T  84373 attt-ttgaatatttatattattcacgtattttatcgctttaatagaaatagggcgttacagatac 84309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 25702 - 25479
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||| ||||||||||||| ||||||||||||| | |||||||||| |||| ||||| |||||||||||| |||||||||| ||||| ||||  ||||    
T  25702 gattattttagattgtttattctggatttatttacgttgtggagatttacccaattgtcaggatttggagaatttttatgatgatgtattttgacctcat 25603  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    ||||||||||||||| |||| |||||||||||| || ||| |||||||| | ||||||||||||||||||||||| |||||| ||||||| ||| | |||    
T  25602 ggcatgtatgcttttgaagtgtatggtttatattcgttgctactgttgagaatttttatacatgcatgttgttttagattttattgatgacgtgacatct 25503  T
Q  214 atttcttgaatatttatattattc 237  Q
    ||||||||||||||||||||||||    
T  25502 atttcttgaatatttatattattc 25479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 24272198 - 24271938
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtg-gagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||| ||||||| ||||||||||||||||||||  | |  ||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  24272198 gattactctagatcgtttattttggatttatttatgttttagagatttacccatttgtcgggatttggagaatttttatgatgatgtattttgatatcat 24272099  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||| ||| ||||  | || |||| ||||||||| |||| |||||||| | |||||||||||||||||| |||||||||| |||||||| |||||||||    
T  24272098 gacatatatactttagaggtgtatgatttatatccactgcgactgttgagaatttttatacatgcatgttattttggatttcgttgatgacgtggcgtct 24271999  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||| |||||||  |||||||| |||||||||||||||| |||||||||    
T  24271998 atttcttgaatatttacattattcgcgtgttttatcgctttaatagaaatagggcgttaca 24271938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 6092601 - 6092343
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    ||||||||||||||||||||| ||||||||||||  | | |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | |     
T  6092601 gattattctagattgtttattctggatttatttatgttgcggagatttgcccatttgtcgggatttggagaatttttatgatgttgtattttgatcttac 6092502  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtct 213  Q
    | ||||||  ||||  |  | |||| | ||||||||||||||||||||| | |||| ||| |||| |||||||| ||||||||||||||| || ||||||    
T  6092501 gacatgtagactttggagatgtatgatctatatccgctgcaactgttgagaatttt-atatatgcttgttgttt-ggattttgttgatgacgtagcgtct 6092404  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||  |||||||| |||||||||| ||||| |||||||||    
T  6092403 atttcttgaatatttatattattcgcgtgttttatcgctttaataaaaatagggcgttaca 6092343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 20 - 275
Target Start/End: Original strand, 30995012 - 30995265
Alignment:
Q  20 ttctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatg 119  Q
    |||||||||||| ||||||||||||||||  ||||||||||| |||| |||||||||||| ||||| ||||| | || ||||| ||||| || || ||||    
T  30995012 ttctagattgttcattttggatttattta--tgtggagattttcccaattgtcgggatttagagaatttttaggttgatgtattttgatctc-tgacatg 30995108  T
Q  120 tatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctattt 217  Q
    ||| ||||| | || ||||||||||||||||||| |||||||| | |||||||| |||  |||| ||| ||||||||  ||||||| |||||||||||||    
T  30995109 tatacttttgaggtgtatggtttatatccgctgcgactgttgagaatttttatatatgtctgttattt-ggattttgaattgatgacgtggcgtctattt 30995207  T
Q  218 cttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||    
T  30995208 cttgaatatttatattattcgtgtgttttatcgctttaataaaaatagggcgttacac 30995265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 67 - 274
Target Start/End: Complemental strand, 43640446 - 43640240
Alignment:
Q  67 tttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatt 166  Q
    ||||| |||| || ||||| |||||||||  ||||| ||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||| || |    
T  43640446 tttgtagggacttagagaatttttatgattatgtattttgatatcatggcatgtatgctttgaa-gtatatggtttatatccgctgcgactgttggaaat 43640348  T
Q  167 ttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataag 266  Q
    |||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||||||||  |||||  |||||||| |||||||||| ||||| |    
T  43640347 ttttatacatgcatgttgttttgggttttgttgatgacgtatcgtctatttcttgaatatttatgctattcgcgtgttttatcgctttaatataaatagg 43640248  T
Q  267 gcgttaca 274  Q
    ||||||||    
T  43640247 gcgttaca 43640240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 19435982 - 19436203
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg-atttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| ||||||| |||||| ||||||||| |||||| || ||||| ||  || |||||||||||||| |||| |||||||| |||||||||||||    
T  19435982 tggagatttacccatttctcgggacttggagaacatttatgttgatgtattttttatatcatggcatgtatg-ttttgaagtatattgtttatatccgct 19436080  T
Q  152 gcaactgttgaaattttttatacatgcatgttgttttggattttgttga-tgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccg 250  Q
    || |||||||| |||||| |||||||||||||||||||||||||||| | |||||| || |||||||||||||||| | ||||||||  |||||||| ||    
T  19436081 gcgactgttgagattttt-atacatgcatgttgttttggattttgtttaatgatgtagcttctatttcttgaatatatgtattattcgcgtgttttatcg 19436179  T
Q  251 ctttaatagaaataaggcgttaca 274  Q
    |||||||||||||| || ||||||    
T  19436180 ctttaatagaaatagggtgttaca 19436203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 25132368 - 25132255
Alignment:
Q  15 gattattctagattgtttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||    
T  25132368 gattattctagattgtttattttggatttatttatattgtggagatttgcccatttgacgggatttggagaatttttatgatgttgtattttgatctcat 25132269  T
Q  114 ggcatgtatgcttt 127  Q
    ||||||||| ||||    
T  25132268 ggcatgtatacttt 25132255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 6343667 - 6343542
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  6343667 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 6343568  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  6343567 atggtgctagctatagatgcacatgc 6343542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 9917648 - 9917523
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  9917648 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 9917549  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  9917548 atggtgctagctatagatgcacatgc 9917523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 14324151 - 14324026
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  14324151 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 14324052  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  14324051 atggtgctagctatagatgcacatgc 14324026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 274 - 398
Target Start/End: Complemental strand, 1993879 - 1993755
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  1993879 acatacttcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 1993780  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    |||||||||||||||||||||||||    
T  1993779 atggtgctagctatagatgcacatg 1993755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 32738609 - 32738355
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcat 118  Q
    |||||||| | | |||||||||||||  ||||| |||| ||| |||||||||||||| || ||||||||||||| |  ||||| || ||| |||||||||    
T  32738609 tctagattatctgttttggatttatt--catgttggagttttacccatttgtcgggactttgagaacttttatgtttatgtatttttgatatcatggcat 32738512  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatt 216  Q
    ||||| ||||  |||||||||||||||| |||||| |||||||| |||||| || |||||||||||  |||| |||||||| ||| | || |||||||||    
T  32738511 gtatg-ttttggagtatatggtttatattcgctgcgactgttgagattttt-atgcatgcatgttgaatttgaattttgtttgataacgtagcgtctatt 32738414  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||  |   ||||||  ||||||||||||||||||||||||| ||||||||||    
T  32738413 tcttgaataaatgccttattcgcgtgttttaccgctttaatagaaatagggcgttacac 32738355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 3710230 - 3710356
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  3710230 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 3710329  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  3710330 aatggtgttagctatagatgcacatgc 3710356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 11867186 - 11867060
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  11867186 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 11867087  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  11867086 aatggtgttagctatagatgcacatgc 11867060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 35358579 - 35358453
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||||| ||||||||||||||||    
T  35358579 acatactccatcactatttggaaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatgttcgaagacatcaatgtca 35358480  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||||||| |||||||||||||||||||    
T  35358479 aatggtgttagctatagatgcacatgc 35358453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 28501619 - 28501744
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||||||||| | |||||| ||||||||||||||||| |||||   || |||||| | ||||||||| |||||| |||||||||||||||||    
T  28501619 acatacttcatcactatttggaaaacaactaaattcaatcctaactagtttggatggtattataagagttgcaccaaatgttcgaagacatcaatgtcaa 28501718  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  28501719 atggtgctagctatagatgcacatgc 28501744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 4810885 - 4811010
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||| ||||||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||| | ||||||||||||| ||||||||||    
T  4810885 acattctgcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcatcaaatgtttgaagacgtcaatgtcaa 4810984  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||||||||||||||    
T  4810985 atggtgttagctatagatgcacatgc 4811010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 18093668 - 18093543
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||| ||| | ||||||||| |||||| |||||||||| ||||||    
T  18093668 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatactatgatagttgcaccaaatgttcgaagacatcattgtcaa 18093569  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  18093568 atggtgctagctatagatgcacatgc 18093543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 10048940 - 10048815
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||| ||||||||||   | ||||||| | |||| |||| ||||||||||||||||| ||||||    
T  10048940 acatattgcatcactatttggaaagcaactaaattcaatcttaaccagtttggataatattatgagagtttcaccaaatgtttgaagacatcattgtcaa 10048841  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  10048840 atggtgctagctatagatgcacatgc 10048815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 14752509 - 14752633
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   || |||||| | ||||||| | |||||| |||||||| ||||||||    
T  14752509 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggatggtattatgaaagttgcatcaaatgttcgaagacattaatgtcaa 14752608  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    |||||||||||||||||||||||||    
T  14752609 atggtgctagctatagatgcacatg 14752633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 274 - 398
Target Start/End: Complemental strand, 30567810 - 30567686
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   |  |||| ||| ||||||||| |||||| |||||||||||| ||||    
T  30567810 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtatttttagagttgcaccaaatgttcgaagacatcaatttcaa 30567711  T
Q  374 atggtgctagctatagatgcacatg 398  Q
    ||||| ||||||||| |||||||||    
T  30567710 atggttctagctatatatgcacatg 30567686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 276 - 399
Target Start/End: Original strand, 11446987 - 11447110
Alignment:
Q  276 atactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaat 375  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||| ||    
T  11446987 atactgcatcactatttggaaaacaaataaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcagat 11447086  T
Q  376 ggtgctagctatagatgcacatgc 399  Q
    ||||||||||||| ||||||||||    
T  11447087 ggtgctagctatatatgcacatgc 11447110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 104 - 265
Target Start/End: Original strand, 22137924 - 22138085
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttata-tccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgat 201  Q
    ||||| |||||||||||||  |||| || |||||| |||||| || ||||| |||||||| |||||| ||||||||||||||||||||| ||||| ||||    
T  22137924 ttgatatcatggcatgtata-ttttgaattatatgatttataatctgctgcgactgttgagattttt-atacatgcatgttgttttggaatttgtgtgat 22138021  T
Q  202 gatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataa 265  Q
    || || ||||||||||||||||||| | ||||||||  |||||| | |||||||||||||||||    
T  22138022 gacgtagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaataa 22138085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 19648196 - 19647975
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatc-ttgatttcatggcatgtatgcttttaaagtatatggtttata-tccgc 150  Q
    |||| |||| ||||||| |||||| |||||||  ||||||| || |||||  ||||| |||||||||||||  |||| |||| ||||||||||| |||||    
T  19648196 tggatatttacccatttatcgggacttggagag-ttttatgttgatgtattattgatatcatggcatgtata-ttttgaagtgtatggtttataatccgc 19648099  T
Q  151 tgcaactgttgaaattttttatacatgcatg-ttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    ||| |||||||| || || ||||  |||||| |||||| | ||||||| ||||||||| ||||||||||||||||||||  ||||||||   |||||||     
T  19648098 tgcgactgttgagatattatata--tgcatgattgtttggaattttgtatgatgatgtagcgtctatttcttgaatattattattattcgcttgttttat 19648001  T
Q  249 cgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||| |||||||||    
T  19648000 cgctttaatagaaatagggcgttaca 19647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 9544563 - 9544438
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  9544563 acatattgcatcactatttggaaaacaactaaattcaatcttaaccagtttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 9544464  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  9544463 atggtgctagctatagatgcacatgc 9544438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 399
Target Start/End: Complemental strand, 33664732 - 33664615
Alignment:
Q  282 catcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgct 381  Q
    |||||||||| | ||||||  ||||||||||||||||||||||   |  |||||| | ||||||||| ||| ||||||||||||||||||||||||||||    
T  33664732 catcactatttggaaaacaattaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatttttgaagacatcaatgtcaaatggtgct 33664633  T
Q  382 agctatagatgcacatgc 399  Q
    ||||||| ||||||||||    
T  33664632 agctatatatgcacatgc 33664615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 36634031 - 36633906
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||  | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||  |||||| |||||||||||||||||    
T  36634031 acatattgcatcactatctggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcactaaatgttcgaagacatcaatgtcaa 36633932  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  36633931 atggtgctagctatatatgcacatgc 36633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 42884727 - 42884852
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   |  |||||| | ||||||||| ||||||  ||||||||||||||||    
T  42884727 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggattgtattatgagagttgcaccaaatgttcaaagacatcaatgtcaa 42884826  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||  ||||||| ||||||||||    
T  42884827 atggtgtcagctatatatgcacatgc 42884852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 16883272 - 16883397
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||| ||||| | |||||| |||||||| |||||||| |||||   || |||||| | ||||||||| ||||||  ||||||||||||||||    
T  16883272 acatactacatccctatttggaaaacaactaaattctatcctaactagtttggatggtattatgagagttgcaccaaatgttcaaagacatcaatgtcaa 16883371  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  16883372 atggtgctagctataaatgcacatgc 16883397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 17040962 - 17041087
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||| |||| ||||| | |||||| |||||||| |||||||| |||||   || |||||| | ||||||||| ||||||  ||||||||||||||||    
T  17040962 acatactacatccctatttggaaaacaactaaattctatcctaactagtttggatggtattatgagagttgcaccaaatgttcaaagacatcaatgtcaa 17041061  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  17041062 atggtgctagctataaatgcacatgc 17041087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 21097035 - 21097160
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||| | |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  21097035 acatattgcatcactatttggaaaataactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 21097134  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||||| |||||| ||||||||||    
T  21097135 atggtgctggctatatatgcacatgc 21097160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 53 - 274
Target Start/End: Complemental strand, 25303699 - 25303476
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatat-ggtttatatccgc 150  Q
    ||||||||||||| |||||||||| ||||||||| |||||| || ||||| || ||| ||||| |||| ||||||  || |||| | |||||||||||||    
T  25303699 tggagatttgcccctttgtcgggacttggagaacatttatgttgatgtatttttgatatcatgacatgcatgcttcgaa-gtattttggtttatatccgc 25303601  T
Q  151 tgcaactgttgaaattttttatacatgcatgttgttttgga-ttttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    ||| | |||||| |||||| || |||||||||||  || || |||||| |||||| || ||||||||||||||||||| |   ||||||  | ||||||     
T  25303600 tgcgaatgttgagattttt-atgcatgcatgttgaatttgagttttgtatgatgacgtagcgtctatttcttgaatatatgctttattcgcgagttttat 25303502  T
Q  249 cgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||| |||||||||    
T  25303501 cgctttaatagaaatagggcgttaca 25303476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 5328 - 5549
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatt-tcatggcatgtatgcttttaaagtatatggtttatat--ccg 149  Q
    ||||||||| || ||||||||||| |||||||||||| |||||  ||||| ||  || |||||||||||||||||   |  ||||||||||||||  |||    
T  5328 tggagattt-cctatttgtcgggacttggagaactttcatgattatgtattttcgttatcatggcatgtatgcttg--atttatatggtttatatatccg 5424  T
Q  150 ctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttac 248  Q
    |||| |||||||| |||||| || |||||||||   |||| ||||||| |||||| || ||||||||||||||||||  | | ||||||  |||||||||    
T  5425 ctgcgactgttgagattttt-atgcatgcatgtgaatttgaattttgtatgatgacgtagcgtctatttcttgaataaatgtcttattcgcgtgttttac 5523  T
Q  249 cgctttaatagaaataaggcgttaca 274  Q
    || || |||||||||| |||||||||    
T  5524 cgtttaaatagaaatagggcgttaca 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 376
Target Start/End: Complemental strand, 19168556 - 19168454
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| ||||||||||| |||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  19168556 acatactgcatcactatttggaaaacaactaaattcaattctaaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 19168457  T
Q  374 atg 376  Q
    |||    
T  19168456 atg 19168454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 45205980 - 45205854
Alignment:
Q  274 acatactgcatcactatt-ggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtca 372  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||   |  |||| | | ||||||||| ||| || ||||||||||| ||||    
T  45205980 acatactgcatcactatttggaaaaacaactaaattcaatcctaaccagtttggattgtattttgagagttgcaccaaatattcgaagacatcaaggtca 45205881  T
Q  373 aatggtgctagctatagatgcacatgc 399  Q
    ||| |||| ||||||| |||| |||||    
T  45205880 aattgtgcaagctatatatgcccatgc 45205854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 4291591 - 4291466
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  4291591 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 4291492  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  4291491 atggtgctagctatagatgcacatgc 4291466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 7361346 - 7361471
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||||||||||||||||||||||| | |||||||||||||| |||| |||   || |||||| | ||||||||| ||| ||  |||  ||||| |||||    
T  7361346 acatactgcatcactattggaaaaataactaaattcaatcctgaccaatttggatggtattataagagttgcaccaaatattcaaaggaatcaaagtcaa 7361445  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||| ||||||||||||| ||||||    
T  7361446 atggttctagctatagatgtacatgc 7361471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 275
Target Start/End: Original strand, 24296642 - 24296852
Alignment:
Q  64 ccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtt--tatatccgctgcaactgttg 161  Q
    ||||||||||||| |||||||||||| |||||  ||||| ||||| ||||||||||||||   || |  |||||||||  |||||||||||| || ||||    
T  24296642 ccatttgtcgggacttggagaactttcatgattatgtattttgatatcatggcatgtatg--attgatttatatggtttatatatccgctgcgacagttg 24296739  T
Q  162 aaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaataga 260  Q
      |  |||||| |||||||||   ||| |||||||| ||||||||| | |||||||||||||||| ||    |||||  | |||||||||||||||||||    
T  24296740 gga--ttttatgcatgcatgtgaatttagattttgtatgatgatgtagtgtctatttcttgaataattgccatattcgcgagttttaccgctttaataga 24296837  T
Q  261 aataaggcgttacac 275  Q
    |||  ||||||||||    
T  24296838 aatgtggcgttacac 24296852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 399
Target Start/End: Original strand, 26820964 - 26821081
Alignment:
Q  282 catcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgct 381  Q
    |||||||||| | |||||| |||||||||||| || ||| |||   |  |||||| | ||||||||| |||||| ||||||||||||||||| |||||||    
T  26820964 catcactatttggaaaacaactaaattcaatcttatccattttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaattggtgct 26821063  T
Q  382 agctatagatgcacatgc 399  Q
    ||||||| ||||||||||    
T  26821064 agctatatatgcacatgc 26821081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 167 - 274
Target Start/End: Complemental strand, 19655512 - 19655404
Alignment:
Q  167 ttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataa 265  Q
    ||||||||||||||||   |||| ||||||| |||||| || ||||||||||||||||||| | ||||||||  |||||| | ||||||||| |||||||    
T  19655512 ttttatacatgcatgtgagtttgaattttgtatgatgacgtagcgtctatttcttgaatatatttattattcgcgtgtttaatcgctttaattgaaataa 19655413  T
Q  266 ggcgttaca 274  Q
    |||||||||    
T  19655412 ggcgttaca 19655404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 399
Target Start/End: Complemental strand, 1515892 - 1515821
Alignment:
Q  328 tgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagctatagatgcacatgc 399  Q
    ||||||||| | | ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  1515892 tgatattatgagaattgcaccaaatgttcaaagacatcaatgtcaaatggtgctagctatagatgcacatgc 1515821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 23823642 - 23823779
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgttgatgatgtggcgtctatttcttgaatatttatattat 235  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||||||  |||| ||||||||||||| || || ||||||||||||||| ||  |||||    
T  23823642 tggtttatatccgctgcgactgttgaga-tttttatgcatgcatgttgaatttgaattttgttgatgacgtagcatctatttcttgaataattgcattat 23823740  T
Q  236 tcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||   |||| ||  ||||||||||||||| || ||||||    
T  23823741 tcgcatgttctattgctttaatagaaatagggtgttaca 23823779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 23825586 - 23825723
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgttgatgatgtggcgtctatttcttgaatatttatattat 235  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||||||  |||| ||||||||||||| || || ||||||||||||||| ||  |||||    
T  23825586 tggtttatatccgctgcgactgttgaga-tttttatgcatgcatgttgaatttgaattttgttgatgacgtagcatctatttcttgaataattgcattat 23825684  T
Q  236 tcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||   |||| ||  ||||||||||||||| || ||||||    
T  23825685 tcgcatgttctattgctttaatagaaatagggtgttaca 23825723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 9783040 - 9783149
Alignment:
Q  166 tttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
    |||||||||||||| ||||||||||||||||| ||| || || |||||||||||||| |||| |  |||||||  |||||||| |||||||||| |||||    
T  9783040 tttttatacatgcacgttgttttggattttgtatgacgacgtagcgtctatttcttgtatatatgcattattcgcgtgttttatcgctttaatataaata 9783139  T
Q  265 aggcgttaca 274  Q
     || ||||||    
T  9783140 gggtgttaca 9783149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 20021827 - 20021763
Alignment:
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||||| || |||||||||    
T  20021827 gtctatttcttgaatatttgtattattcacgtgttttatcgctttaatagaagtatggcgttaca 20021763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 24381726 - 24381658
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacacat 277  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||||||| || ||||||||||||    
T  24381726 cgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgttacacat 24381658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 275
Target Start/End: Original strand, 40642407 - 40642613
Alignment:
Q  67 tttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaat 165  Q
    |||||||||| ||||||||  |||||| || ||||| || ||| ||||| |||||||||||  || |||| ||||||||||||||||| |||| ||| |     
T  40642407 tttgtcgggacttggagaatatttatgttgatgtatttttgatatcatgacatgtatgcttcgaa-gtatttggtttatatccgctgcgactgatgaga- 40642504  T
Q  166 tttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaat 263  Q
     |||||||| || ||||||  |||| ||||||| |||||| || ||||||||||||||||||| |   ||||| | | | |||| |||||||||||||||    
T  40642505 -ttttatacgtgtatgttgaatttgaattttgtatgatgacgtagcgtctatttcttgaatatatgctttatttacgag-tttatcgctttaatagaaat 40642602  T
Q  264 aaggcgttacac 275  Q
     |||||||||||    
T  40642603 -aggcgttacac 40642613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 25593210 - 25593125
Alignment:
Q  192 ttttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacacat 277  Q
    ||||||||| ||||| || |||||||||||||||  | | ||||||  |||||||| |||||||||||||||| || |||||||||    
T  25593210 ttttgttgaagatgtagcatctatttcttgaataaatgttttattcgcgtgttttatcgctttaatagaaatagggtgttacacat 25593125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 34875984 - 34875919
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||| ||||||||   ||||||| ||||||||||||| || |||||||||    
T  34875984 cgtctatttcttgaatatttgtattattcgcatgttttatcgctttaatagaagtagggcgttaca 34875919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 274
Target Start/End: Complemental strand, 24839449 - 24839315
Alignment:
Q  141 ttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgtt--gatgatgtggcgtctatttcttgaatatttatattattca 238  Q
    ||||||| ||||| |||||||| | |||||||| ||||||||||||| | |||||| |  || || || ||||||||||||||||| |||||||||| |     
T  24839449 ttatatctgctgcgactgttgagaatttttatatatgcatgttgttt-gaattttgatatgaagacgtagcgtctatttcttgaatttttatattatccg 24839351  T
Q  239 tgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     |||| | | | |||||||||| ||| |||||||||    
T  24839350 cgtgtataatcactttaatagagatagggcgttaca 24839315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 19110584 - 19110521
Alignment:
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||||||||||||||| ||||||||| |||||||| | ||||||||||| || ||| |||||||    
T  19110584 tatttcttgaatatttgtattattcacgtgttttatcactttaatagaagtagggcattacaca 19110521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 24089571 - 24089660
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaata 225  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||||||  |||| ||||||| |||||| || || |||||||||||||||    
T  24089571 tggtttatatccgctgcgactgttgaga-tttttatgcatgcatgttgaatttgaattttgtatgatgacgtagcatctatttcttgaata 24089660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 26826864 - 26826914
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||    
T  26826864 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagttt 26826914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 33906609 - 33906659
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||    
T  33906609 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagttt 33906659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 19643824 - 19643763
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    ||||||| ||||||||||  |||||||  |||||||| |||||||||||||||| |||||||    
T  19643824 tctatttattgaatatttggattattcgcgtgttttatcgctttaatagaaatagggcgtta 19643763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 237
Target Start/End: Complemental strand, 18533459 - 18533282
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgtt-- 160  Q
    ||||| ||| |||| ||| |||| || ||||||| ||||| ||||| ||||| ||||||| ||||  |  | |||| |||||||||||||| ||||||      
T  18533459 cccatatgttgggacttgaagaatttatatgatgatgtattttgatctcatgacatgtatactttggagatgtatgttttatatccgctgcgactgttga 18533360  T
Q  161 gaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctatttcttgaatatttatattattc 237  Q
    ||| |||||||||  | |||||||||||  ||||||   ||| || || || ||||||||||||||| |||||||||||    
T  18533359 gaatttttttatatgtccatgttgtttt-aattttgatgtgaagacgtagcatctatttcttgaataattatattattc 18533282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 32390 - 32437
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg 184  Q
    ||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  32390 tggtttatatccgctgcgactgttgaaatttaatatgcatgcatgttg 32437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 274
Target Start/End: Complemental strand, 7319459 - 7319295
Alignment:
Q  109 ttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtg 207  Q
    |||||| |||||||||||  || ||||  |||||||||||||||| |||||||| | | ||||| |||||||||||  || || ||||| |||||| ||     
T  7319459 ttcatgacatgtatgcttcgaa-gtattaggtttatatccgctgcgactgttgaga-tctttatgcatgcatgttgaatttgaatttgtatgatgacgta 7319362  T
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    || |||||||||||||||  | ||||||||   |||||||  || |||||| ||||| || ||||||    
T  7319361 gcatctatttcttgaataaatgtattattcgcatgttttattgccttaataaaaatagggtgttaca 7319295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 399
Target Start/End: Complemental strand, 16725222 - 16725180
Alignment:
Q  357 gaagacatcaatgtcaaatggtgctagctatagatgcacatgc 399  Q
    |||||||||||||||||||| |||||| |||| ||||||||||    
T  16725222 gaagacatcaatgtcaaatgatgctagttatatatgcacatgc 16725180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 22582145 - 22582234
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaata 225  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||||||  |||| |||| || |||||| || || |||||||||||||||    
T  22582145 tggtttatatccgctgcgactgttgaga-tttttatgcatgcatgttgaatttgaatttcgtatgatgacgtagcatctatttcttgaata 22582234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 24343615 - 24343680
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||| |||||||||  ||||||   ||||||||||||||| | |||||||    
T  24343615 gcgtctatttcttgaatattt-tattattcacatgttttgttgctttaatagaaataggacgttaca 24343680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 25255567 - 25255629
Alignment:
Q  212 ctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||  ||||||||   |||||||  ||||||||||||||| |||||||||    
T  25255567 ctatttcttgaatattattattattcgcatgttttattgctttaatagaaatacggcgttaca 25255629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 20270963 - 20270820
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggatttt-gttgatgatgtggcg--tctatttcttgaatatttata 231  Q
    |||| |||||||| ||||| ||| |||| | |||||||| || ||||||| ||| |||||| ||||| || || |||  |||||||||||||||  | |     
T  20270963 tatgatttatatctgctgcgactattgagaatttttatatattcatgttgattttgatttttgttgaagacgtagcgcatctatttcttgaataaatgtt 20270864  T
Q  232 ttattcatgtgtttt-accgctttaatagaaataaggcgttaca 274  Q
    ||||||  ||||||| | |||||||||||||||| || ||||||    
T  20270863 ttattcgcgtgtttttatcgctttaatagaaatagggtgttaca 20270820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 274
Target Start/End: Complemental strand, 28969913 - 28969774
Alignment:
Q  137 tggtttatat-ccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttg-ttgatgatgtggcgtctatttcttgaatatttatatt 233  Q
    |||||||||| ||||||| |||||||||| ||| ||| |||||||||||  |||| ||||||  |||||| || || |||||||||||||||  | ||||    
T  28969913 tggtttatattccgctgcgactgttgaaa-tttatatgcatgcatgttgagtttgaattttgaatgatgacgtagcatctatttcttgaataaatgtatt 28969815  T
Q  234 attcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||   ||||| |  ||||||||||||||| || ||||||    
T  28969814 attcgcatgtttaattgctttaatagaaatagggtgttaca 28969774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 53 - 276
Target Start/End: Original strand, 6948 - 7170
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctg 152  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||| |||| |||||||||||||| |  |||| |||||||||||||||    
T  6948 tggagatttacccatttgtcgggatttggagaatttttatgatgatgtat-ttgatatcatagcatgtatgcttttgagttataaggtttatatccgctg 7046  T
Q  153 caactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgct 252  Q
    ||||||||||||   |||||||||||||||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||  || ||||| ||||    
T  7047 caactgttgaaaaaatttatacatgcatgttgttttgcatttcgttgatgaagtagcgtctatttcttgaatatttatattattcgcgtattttatcgct 7146  T
Q  253 ttaatagaaataaggcgttacaca 276  Q
    | |||||||||| || ||||||||    
T  7147 taaatagaaatagggagttacaca 7170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 1992 - 2255
Alignment:
Q  15 gattattctagattgtttattttggatttatttaca-tgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||||||||| ||||| ||||  ||||    
T  1992 gattattctagattgtttattttggatttatttatactgtggagatttacccatttgtcgggatt-ggagaatttttatgatgatgtattttgacctcat 2090  T
Q  114 ggcatgtatgctttta----aagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg-ttgatgatgtgg 208  Q
    |||||||||| ||||     |||| ||||||||||||||||| |||||||||| | |||||||| |||| ||||| ||||||||||| ||||||| || |    
T  2091 ggcatgtatgtttttttttgaagtgtatggtttatatccgctacaactgttgagaatttttatatatgcctgttg-tttggattttgtttgatgacgtag 2189  T
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    | ||||||||||||||| || ||||||||| |||||||| |||||||||||||||| || |||||||    
T  2190 catctatttcttgaata-ttctattattcacgtgttttatcgctttaatagaaatagggtgttacac 2255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 51 - 275
Target Start/End: Original strand, 14160 - 14392
Alignment:
Q  51 tgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgctttta---------aagtatatggtt 141  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||| ||||| ||||  ||||| |||||||| ||||          || | |||||||    
T  14160 tgtggagatttacccatttgtcgggatt-ggagaatttttatgatgatgtattttgacctcatgacatgtatgtttttttttttttttaattgtatggtt 14258  T
Q  142 tatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg-ttgatgatgtggcgtctatttcttgaatatttatattattcatg 240  Q
    ||||||||||||||||||||| | |||||||| |||| ||||| ||||||||||| ||||||| | |||||||||||||||||||||| |||||||||      
T  14259 tatatccgctgcaactgttgagaatttttatatatgcctgttg-tttggattttgtttgatgacgaggcgtctatttcttgaatatttctattattcaca 14357  T
Q  241 tgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||| ||||||||||||| || ||||||||||    
T  14358 tgttttatcgctttaatagaattagggcgttacac 14392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 21 - 274
Target Start/End: Complemental strand, 11580 - 11327
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg-atttcatggcat 118  Q
    |||||||| ||| |||||||||||||  ||||| |||||||| |||||||||||||| |||||||||||||||| |||||||| ||  || ||||| |||    
T  11580 tctagattatttgttttggatttatt--catgttggagatttacccatttgtcgggacttggagaacttttatgttgttgtattttttatatcatgtcat 11483  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctatt 216  Q
    |||| |||| || |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  11482 gtattctttgaa-gtatatggtttatatccgctgcgactgttgagattttt-atacatgcatgttgttttggattttgaattgatgatgtggcgtctatt 11385  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||| |   ||||||  |||||||| ||| |||||||||||| |||||||||    
T  11384 tcttgaatatatgctttattcgcgtgttttatcgccttaatagaaatagggcgttaca 11327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 110 - 274
Target Start/End: Complemental strand, 35977 - 35814
Alignment:
Q  110 tcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggc 209  Q
    ||||| ||||||| ||||| | || |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  35977 tcatgtcatgtatacttttgaggtgtatggtttatatccgctgcaactgttgagaatttttatacatgcatgttgttttggattttgttgatgatgtggc 35878  T
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||| |||||||||||  |||||||| |||||||||||||||| |||||||||    
T  35877 gtctatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 35814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 77 - 274
Target Start/End: Original strand, 11086 - 11283
Alignment:
Q  77 tttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacat 176  Q
    ||||||||| |||||||||| ||||| ||||| ||||| ||||||| ||||| | || ||||||||||||||| |||||||||||| | |||||||||||    
T  11086 tttggagaatttttatgatgatgtattttgatatcatgacatgtatactttttaggtgtatggtttatatccgttgcaactgttgagaatttttatacat 11185  T
Q  177 gcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||| |||||||||||||||||| ||||  |||||| ||| ||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  11186 gcatgttggtttggattttgttgatgacgtggaatctattacttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 11283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 725 - 464
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcat 113  Q
    |||||||||||||| | | || ||||||||||    | ||||||||| |||| |||||||||||| |||||| ||| |||||| ||||| ||||  || |    
T  725 gattattctagattatctgttgtggatttattatgttttggagatttacccaattgtcgggattttggagaattttgatgatgatgtatgttgacatcgt 626  T
Q  114 ggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg-ttgatgatgtggcgtc 212  Q
     |||||||||||||| || |||||||||||||||||||||||||||||| |   |||||| |||||||||||||||||||||| |||||||||| |||||    
T  625 agcatgtatgcttttgaattatatggtttatatccgctgcaactgttgagaacgtttatatatgcatgttgttttggattttgtttgatgatgtagcgtc 526  T
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||| |||||||||||||||   |||||||| ||||||||||||||||  ||||||||    
T  525 tatttcttcaatatttatattatttgcgtgttttatcgctttaatagaaatagtgcgttaca 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 22779 - 22844
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||| ||||||||||||||||||  |||||||| | |||||||||||||| ||| |||||    
T  22779 cgtctatttcgtgaatatttatattattcgcgtgttttatcactttaatagaaatagggctttaca 22844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 99222 - 99474
Alignment:
Q  21 tctagattgtttattttggatttatttacatgtg-gagatttgcccatttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcat 118  Q
    |||||||| | |||||||||||||||  |||||  ||||||| |||||||||| ||| |||||||||||||||| ||  ||| | ||||| | |||||||    
T  99222 tctagattatctattttggatttatt--catgttagagatttacccatttgtcaggacttggagaacttttatgttgacgtacttttgatattatggcat 99319  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgtt-gatgatgtggcgtctattt 217  Q
    ||||||||| || |||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| ||||| || ||||||||||    
T  99320 gtatgctttgaa-gtatatggtttatatccgctgcgactgttgagattttt-atacatgcatgttgttttggattttgtttgatgacgtagcgtctattt 99417  T
Q  218 cttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||| | ||||||||  |||||||| |||||||||||||||| | |||||||    
T  99418 cttgaatatatgtattattcgcgtgttttatcgctttaatagaaataggacgttaca 99474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 53 - 278
Target Start/End: Original strand, 3086 - 3313
Alignment:
Q  53 tggagatttgcccatttgtcgggattt-ggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| |||||||||||| ||| || ||| || ||| ||||| ||||| ||||| ||||||| ||||| | || | |||||||||||||||    
T  3086 tggagatttacccaattgtcgggattttggaaaattttgatcatgatgtattttgatatcatgacatgtatacttttgaggtgtctggtttatatccgct 3185  T
Q  152 gcaactgttgaaatttt-ttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccg 250  Q
    || |||||||| | ||| ||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||  |||||||| ||    
T  3186 gcgactgttgagagtttcttatacatgcatgttgttttggattttgttgatgacgtagcgtctatttctttaatatttatattattcgcgtgttttatcg 3285  T
Q  251 ctttaatagaaataaggcgttacacata 278  Q
    ||||||| |||||| |||||||||||||    
T  3286 ctttaatggaaatagggcgttacacata 3313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 3092 - 2833
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||| |||||||| | | ||||||||||||| |  | ||||||||| | |||||||||||| |||||||| |||||||||  ||||| ||||| |||||    
T  3092 gattactctagattatctgttttggatttattcatgtttggagatttacgcatttgtcgggacttggagaatttttatgattatgtattttgatatcatg 2993  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtct 213  Q
    |||||||||| ||| ||||  |||||||||||||||||| | |||||| | |||||||||||||||||||||||||||||||| |||||| ||  | |||    
T  2992 gcatgtatgc-tttgaagtgaatggtttatatccgctgcgattgttgagaatttttatacatgcatgttgttttggattttgtatgatgacgtatcatct 2894  T
Q  214 atttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||| | ||||||||  |||||||| ||||||||| |||||  |||||||||    
T  2893 atttcttgaatatatgtattattcgcgtgttttatcgctttaatcgaaatggggcgttaca 2833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 77 - 274
Target Start/End: Original strand, 3771 - 3965
Alignment:
Q  77 tttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacat 176  Q
    ||||||||| |||||||||| ||||| | ||| ||||| ||||||| ||||| | || ||||||||||||| |||||||||||||| | |||||||||||    
T  3771 tttggagaa-ttttatgatgatgtat-tcgatctcatgacatgtatacttttgaggtgtatggtttatatctgctgcaactgttgagaatttttatacat 3868  T
Q  177 gcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||  |||||||| |||||||||||||||| |||||||||    
T  3869 gcatgttgtttaggattttgttgatgacgtgacgtctatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 3965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 63 - 274
Target Start/End: Original strand, 4814 - 5025
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||  ||||  |  | |||| | ||||||||||||||| |||||    
T  4814 cccatatgtcgggatttggagaatttttatgatgttgtattttgatttcatggcatgtagactttggagatgtatgatctatatccgctgcaaccgttga 4913  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
     | |||||||| |||||||||||||||| ||||||||| || || ||||||||||||||||||  | | ||||||  |||||||| ||||||||||||||    
T  4914 gaatttttatatatgcatgttgttttggtttttgttgaagacgtagcgtctatttcttgaataaatgttttattcgcgtgttttatcgctttaatagaaa 5013  T
Q  263 taaggcgttaca 274  Q
    || |||||||||    
T  5014 tagggcgttaca 5025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 29247 - 28993
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcat 118  Q
    |||||||| | |||||||||||||||  ||||| |||||||| ||||| |||||||| |||||||||||||||| || ||||| || ||| |||||||||    
T  29247 tctagattatctattttggatttatt--catgttggagatttacccatgtgtcgggacttggagaacttttatgttgatgtatttttgatatcatggcat 29150  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgtt-gatgatgtggcgtctatt 216  Q
    |||| |||| || ||||||| |||||||||||||| |||||||| |||||| || |||||||||||  |||| |||||||| ||||| || |||||||||    
T  29149 gtatcctttgaa-gtatatgatttatatccgctgcgactgttgagattttt-atgcatgcatgttgaatttgaattttgtttgatgacgtagcgtctatt 29052  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||| | | ||||||  |||||||||| |||||||||||||| ||||||||||    
T  29051 tcttgaatatatgtgttattcgcgtgttttacccctttaatagaaatagggcgttacac 28993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 119342 - 119466
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||   || |||||| | ||||||||| |||| | |||||||||||||||||    
T  119342 acatactgcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtattatgagagttgcaccaaatggtcgaagacatcaatgtcaa 119441  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    | |||||| |||||||||||||||||    
T  119442 a-ggtgctggctatagatgcacatgc 119466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 69 - 275
Target Start/End: Complemental strand, 19435 - 19230
Alignment:
Q  69 tgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatttt 168  Q
    ||||||||||||||||| || ||||||| ||||| ||||| ||||| ||||||  ||||  |  | |||| | ||||||||||||||||||||| | |||    
T  19435 tgtcgggatttggagaatttatatgatgatgtattttgatctcatgacatgtagactttggagatgtatgatctatatccgctgcaactgttgataattt 19336  T
Q  169 ttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggc 268  Q
    ||||| ||  ||||||||| |||||||||||||||  | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |    
T  19335 ttatatataaatgttgttt-ggattttgttgatgacatagcgtctatttcttgaatatttatattattcgtgtgttttatcgctttaatagaaataagcc 19237  T
Q  269 gttacac 275  Q
    |||||||    
T  19236 gttacac 19230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 25430 - 25652
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||| ||| |||||||||||||| ||||||||| |||||| || ||||| || ||| ||||| |||||||||||  || |||| |||||||||||||||    
T  25430 tggaggtttacccatttgtcgggacttggagaacatttatgttgatgtatttttgatatcatgccatgtatgcttcgaa-gtatttggtttatatccgct 25528  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttacc 249  Q
    || |||||||| |||||| || |||||||||||  |||| ||||||| ||||||||| ||||||||||||||||||| | ||||||||   |||||||||    
T  25529 gcgactgttgagattttt-atgcatgcatgttgaatttgaattttgtatgatgatgtagcgtctatttcttgaatatatgtattattcgcatgttttacc 25627  T
Q  250 gctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||||||    
T  25628 gctttaatagaaataaggcgttaca 25652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 26160 - 26300
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26160 tatggtttatatctgctgcgactgttgaaaatttgtatacatgcatgttgttttggattttgttgatgatgtgacgtctatttcttgaatatttatatta 26259  T
Q  235 ttc-atgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||   |||||||| |||||||||||||||| || ||||||    
T  26260 ttcggcgtgttttatcgctttaatagaaatagggtgttaca 26300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 26030 - 26142
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaactttt-atgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||| |||||||||||||||||| |||| |||||| ||||| ||||| ||||| ||||||| ||||| | || ||||||||||||| |||    
T  26030 tggagatttacccaattgtcgggatttggagaattttttatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatggtttatatctgct 26129  T
Q  152 gcaactgttgaaa 164  Q
    || ||||||||||    
T  26130 gcgactgttgaaa 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 141401 - 141538
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattatt 236  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||    
T  141401 tggtttatatccgctgcaactgttgagaatttttatacatgcatgttgttttggattttgttgaggacctggcatctatttcttgaata-ttatattatt 141499  T
Q  237 catgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    || |||||||| |||||||||||||||| ||| ||||||    
T  141500 cacgtgttttatcgctttaatagaaatagggccttacac 141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 141 - 274
Target Start/End: Complemental strand, 104008 - 103876
Alignment:
Q  141 ttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatg 240  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |||||||||||  |    
T  104008 ttatatccgctgcaactgttgagaatttttatacatgcatgttgttttggattttattgaagacgtggcgtctatttcttgaata-ttatattattcgcg 103910  T
Q  241 tgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||| |||||||||||||||| |||||||||    
T  103909 tgttttatcgctttaatagaaatagggcgttaca 103876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 77 - 274
Target Start/End: Complemental strand, 20230 - 20036
Alignment:
Q  77 tttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacat 176  Q
    ||||||||| |||||||||| ||||| | ||| ||||| ||||||| ||||| | || |||| |||||||  |||||||||||||| | |||||||||||    
T  20230 tttggagaa-ttttatgatgatgtat-tcgatctcatgtcatgtatacttttgaggtgtatgatttatatttgctgcaactgttgagaatttttatacat 20133  T
Q  177 gcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||  || ||||| |||||||||||||||| ||| |||||    
T  20132 gcatgttgttttggattttgttcatgacgtgacgtctatttcttgaata-ttatattattcgcgttttttatcgctttaatagaaatagggcattaca 20036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 86; Significance: 6e-41; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 130 - 274
Target Start/End: Original strand, 199482 - 199626
Alignment:
Q  130 aagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgtt-gatgatgtggcgtctatttcttgaatattt 228  Q
    ||||||||| |||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| |    
T  199482 aagtatatgttttatatccgctgcgactgttgacattttt-atacatgcatgttgttttggattttgtttgatgacgtagcgtctatttcttgaatatat 199580  T
Q  229 atattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| ||||  |||||||| |||||||||||||||| |||||||||    
T  199581 atataattcgcgtgttttatcgctttaatagaaatagggcgttaca 199626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 65584 - 65459
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||||| ||   || |||| | | ||||||||| ||||||||||||||||||||| ||    
T  65584 acatactgcatcactatttgaaaaacaactaaattcaatcttaaccagcttgaatggtattgtgagagttgcaccaaatgtttgaagacatcaatgttaa 65485  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    | | ||||||||||| ||||||||||    
T  65484 aagctgctagctataaatgcacatgc 65459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 153108 - 152983
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   || ||| || | ||||||||| |||||| |||||||||||||| ||    
T  153108 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagtttggatggtatcatgagagttgcaccaaatgttcgaagacatcaatgtaaa 153009  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    |||||| |||||||| |||| |||||    
T  153008 atggtgttagctataaatgcgcatgc 152983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 35 - 274
Target Start/End: Original strand, 31686 - 31928
Alignment:
Q  35 tttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaa--ag 132  Q
    |||||||||||| |  | ||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||| | |||||||||||| ||| ||  |     
T  31686 tttggatttattcatgtttggagatttacccatttgtcgggacttggagaacttttatgattatgtatcttgatataatggcatgtatgttttgaagtat 31785  T
Q  133 tatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgtttt-ggattttg-ttgatgatgtggcgtctatttcttgaatatttat 230  Q
    |||||| |||||||||||||| |||| ||| | ||||||| ||||||||||||||| | |||||| ||||||| || |||| || ||||||||||| | |    
T  31786 tatatgatttatatccgctgcgactgatgaga-tttttatgcatgcatgttgttttcgaattttgtttgatgacgtagcgtttaattcttgaatatattt 31884  T
Q  231 attattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||  ||||||||  |||||||||||| || |||||||||    
T  31885 attattcgcgtgttttattgctttaatagaattagggcgttaca 31928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 274
Target Start/End: Original strand, 25676 - 25897
Alignment:
Q  56 agatttgcccatttgtcgggatttggagaactttt--atgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgc 153  Q
    |||||| |||||||||||||| |||||||| ||||  |||||  ||||| ||||| |||||||||||||||||| || ||||||||||||||||   ||     
T  25676 agatttacccatttgtcgggacttggagaatttttttatgattatgtattttgatatcatggcatgtatgctttgaa-gtatatggtttatatcaattgt 25774  T
Q  154 aactgttgaaattttttatacatgcatgttgttttggattttgt--tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgc 251  Q
     |||||||| | |||||||||||||| |||||||||| ||||||  |||||| || ||||||||||||||||||| | |||||||| ||||||||| | |    
T  25775 gactgttgagaatttttatacatgcacgttgttttggtttttgtattgatgacgtagcgtctatttcttgaatatatgtattattcgtgtgttttatcac 25874  T
Q  252 tttaatagaaataaggcgttaca 274  Q
    |||| |||||||| ||| |||||    
T  25875 tttattagaaatagggcattaca 25897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 19838 - 20037
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||| |||||||| | | ||||||||||||| | || ||||||||| |||||||||||||| |||||||| |||||||||  ||||| ||||| |||||    
T  19838 gattactctagattatctgttttggatttattcatatttggagatttacccatttgtcgggacttggagaaattttatgattatgtattttgatatcatg 19937  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttg-ttgatgatgtggcgtc 212  Q
    |||||||||| ||| |||||||||||||||||||||| | |||||||  | |||| ||| |||||||||| |||||||||||| |||||||||| |||||    
T  19938 gcatgtatgc-tttgaagtatatggtttatatccgctacgactgttgcga-ttttaatatatgcatgttgattttggattttgtttgatgatgtagcgtc 20035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 29414 - 29613
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    ||||| |||||||| | | ||||||||||||| | || ||||||||| |||||||||||||| |||||||| |||||||||  ||||| ||||| |||||    
T  29414 gattactctagattatctgttttggatttattcatatttggagatttacccatttgtcgggacttggagaaattttatgattatgtattttgatatcatg 29513  T
Q  115 gcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttg-ttttggattttg-ttgatgatgtggcgtc 212  Q
    |||||||||| ||| |||||||||||||||||||||| | |||||||  | |||| ||| |||||||||| |||||||||||| |||||||||| |||||    
T  29514 gcatgtatgc-tttgaagtatatggtttatatccgctacgactgttgcga-ttttaatatatgcatgttgattttggattttgtttgatgatgtagcgtc 29611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 66 - 277
Target Start/End: Complemental strand, 77833 - 77620
Alignment:
Q  66 atttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaat 165  Q
    |||||| ||||||| |||||| |||| | || ||||| ||||  ||||| |||||||| |||| || ||||||||||||||| ||||| |||| ||| ||    
T  77833 atttgttgggatttcgagaacatttacgttgatgtattttgacatcatgacatgtatgtttttgaattatatggtttatatctgctgcgactgatgagat 77734  T
Q  166 tttttatacatgcatgttg-ttttgga-ttttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
    |||| |  ||||||||||| ||||||| |||||| | ||||||| ||||||||||||||||||| | ||||||||  |||||||||| ||||||||||||    
T  77733 ttttaag-catgcatgttgattttggaattttgtataatgatgtagcgtctatttcttgaatatatttattattcgcgtgttttaccactttaatagaaa 77635  T
Q  263 taaggcgttacacat 277  Q
    |||||||||||||||    
T  77634 taaggcgttacacat 77620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 70474 - 70583
Alignment:
Q  167 ttttatacatgcatgttgttttggatt-ttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
    ||||||| ||||||||||||||||| | |||| |||||| || ||||||||||||||||||||  ||||||||  |||||||| |||||||||||| |||    
T  70474 ttttatatatgcatgttgttttggaatcttgtatgatgacgtagcgtctatttcttgaatattattattattcgcgtgttttatcgctttaatagacata 70573  T
Q  265 aggcgttaca 274  Q
     |||||||||    
T  70574 gggcgttaca 70583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 13800 - 13675
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||   ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  13800 acatattgcatcactatttggaaaacaactaaattcaatcctaaccagttttgatgatattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 13701  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    || |||||||||||||||||||||||    
T  13700 atagtgctagctatagatgcacatgc 13675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 63 - 275
Target Start/End: Original strand, 99013 - 99226
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| ||||||||||||||||| || ||| ||| ||||| ||||| ||||| ||||||| ||||  |  | ||||  ||||||||||||| ||||||||    
T  99013 cccatatgtcgggatttggagaatttatataatgatgtatattgatctcatgacatgtatactttggagatgtatgacttatatccgctgcgactgttga 99112  T
Q  163 aattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
     | |||||||| |||||||||||||    |||| | ||| || || ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  99113 gaatttttatatatgcatgttgtttgaatttttatgtgaagacgtagcgtctatttcttgaatatttatattattcacgtgtattatcgctttaatagaa 99212  T
Q  262 ataaggcgttacac 275  Q
    ||| ||||||||||    
T  99213 atagggcgttacac 99226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 226
Target Start/End: Complemental strand, 66654 - 66481
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttg-atttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| ||| |||||||||| ||| |||||||||| | || ||||| ||  || |||| ||||||||| |||| |||||||||||||||||| |      
T  66654 tggagatttacccttttgtcgggacttgaagaacttttacgttgatgtattttttatatcatagcatgtatg-ttttgaagtatatggtttatatctgtg 66556  T
Q  152 gcaactgttgaaattttttatacatgcatgttgt-tttggattttgttgatgatgtggcgtctatttcttgaatat 226  Q
    || |||||||| |||||| || |||| ||||||  |||| ||||||||||||| || ||||||||||||| |||||    
T  66555 gcgactgttgagattttt-atgcatgtatgttgaatttgaattttgttgatgacgtagcgtctatttcttaaatat 66481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 74; Significance: 8e-34; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 21 - 276
Target Start/End: Original strand, 2148 - 2403
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatct-tgatttcatggcat 118  Q
    |||||||| | |||||||||||||||  ||||| |||||||| |||||||||||||| || ||||||||||||| || ||||| | |||| |||| ||||    
T  2148 tctagattatctattttggatttatt--catgttggagatttacccatttgtcgggacttagagaacttttatgttgatgtatttgtgatatcatagcat 2245  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg--ttgatgatgtggcgtctatt 216  Q
    |||||| ||| || ||| ||||||||| ||||||  |||||||| | ||||||||||||||  | |||||||||||||  ||||||| || |||||||||    
T  2246 gtatgc-tttgaattatttggtttatacccgctgtgactgttgaga-tttttatacatgcagatcgttttggattttgaattgatgacgtagcgtctatt 2343  T
Q  217 tcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||  ||||| |   ||||||  |||||||| |||||||||||||||| || ||||||||    
T  2344 tctcaaatatatgccttattcgcgtgttttatcgctttaatagaaatagggtgttacaca 2403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 274
Target Start/End: Original strand, 73356 - 73567
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| |||||||| |||||||| || ||||||| ||||| ||||| ||||||||||||| ||||  |  | |||| |||||||||||||| | ||||||    
T  73356 cccatatgtcgggacttggagaatttatatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatttatatccgctgcgattgttga 73455  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
     | |||||||| |||||||||| ||||| |||| | |  || || || |||||||||||||||  |   ||||||  |||||||| ||||||||||||||    
T  73456 gaatttttatatatgcatgttgatttggtttttatcgtagacgtagcatctatttcttgaataaatgctttattcgcgtgttttatcgctttaatagaaa 73555  T
Q  263 taaggcgttaca 274  Q
    || ||| |||||    
T  73556 tatggcattaca 73567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 27314 - 27189
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||  |||||||||||||||||    
T  27314 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgtacgaagacatcaatgtcaa 27215  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||| ||||||||||| ||||||||||    
T  27214 atgatgctagctatatatgcacatgc 27189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 7174 - 7425
Alignment:
Q  21 tctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcat 118  Q
    |||||||| | | |||||||||||||  ||||| |||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||| |||||||||    
T  7174 tctagattatctgttttggatttatt--catgttggagatttacccatttgtcaggactttgagaacttt-atgttgatgtatttttgatatcatggcat 7270  T
Q  119 gtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctattt 217  Q
    |||| |||| || |||||||||||||||||||||  ||  |||| |||||| ||||||||||||| ||| ||||||||| || | | || ||||||||||    
T  7271 gtatactttgaa-gtatatggtttatatccgctgtgacaattgagattttt-atacatgcatgttattt-ggattttgtatgctcacgtagcgtctattt 7367  T
Q  218 cttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||| | ||||||||  |||||||| || ||||||||||||| ||||||||||    
T  7368 cttgaatatatgtattattcgcgtgttttatcgatttaatagaaatagggcgttacac 7425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 11283 - 11158
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||| ||||||||||   ||||||||| | ||||||||| |||||| |||||||||| ||||||    
T  11283 acatattgcatcactatttggaaagcaactaaattcaatcataaccagtttggatgatattatgagagttgcaccaaatgttcgaagacatcattgtcaa 11184  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  11183 atggtgctagctatagatgcacatgc 11158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 69; Significance: 8e-31; HSPs: 5)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 35 - 274
Target Start/End: Original strand, 106655 - 106893
Alignment:
Q  35 tttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagt 133  Q
    ||||||||||||||  | |||| |||| |||||||||||||| | |||||||||| ||||   ||||| || ||| |||||||||||||  |||| ||||    
T  106655 tttggatttatttatgt-tggatatttacccatttgtcgggactcggagaacttt-atgacaatgtatttttgatatcatggcatgtata-ttttgaagt 106751  T
Q  134 atatggtttata-tccgctgcaactgttgaaattttttatacatgcatg-ttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttat 230  Q
    |||||||||||| |||||||| |||||||| ||||| ||||  |||||| |||||| | ||||||| |||||| || ||||||||||||||||||||  |    
T  106752 atatggtttataatccgctgcgactgttgagattttatata--tgcatgattgtttggaattttgtatgatgacgtagcgtctatttcttgaatattatt 106849  T
Q  231 attattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||   ||||||| |||||||||||||||| |||||||||    
T  106850 attattcgcttgttttatcgctttaatagaaatagggcgttaca 106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 88 - 274
Target Start/End: Original strand, 101893 - 102079
Alignment:
Q  88 tttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttt 187  Q
    |||||| || ||||| ||||| || | |||||||||||||| || |||||||||||||||| |||| ||| |||| |||||| || | |||||| |||||    
T  101893 tttatgttgatgtattttgatatcttagcatgtatgcttttgaattatatggtttatatccactgcgactattgagattttt-atgcttgcatgatgttt 101991  T
Q  188 tggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| ||||| ||||||||| |||||||||||||||||||   ||||||||   ||||||| | |||||||||||||| |||||||||    
T  101992 tggaatttgtatgatgatgtagcgtctatttcttgaatataattattattcgcatgttttatccctttaatagaaatagggcgttaca 102079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 5209 - 5084
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||| | | | ||||||| |||||| ||||||||||||||| |    
T  5209 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattgtgagaattgcaccaaatgttcgaagacatcaatgtcta 5110  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  5109 atggtgctagctatagatgcacatgc 5084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 11658 - 11533
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | ||| || |||||||||||||||||||||||   ||||||| | | | ||||||| |||||| ||||||||||||||| |    
T  11658 acatattgcatcactatttggaaagcaactaaattcaatcctaaccagtttggatgatattgtgagaattgcaccaaatgttcgaagacatcaatgtcta 11559  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  11558 atggtgctagctatagatgcacatgc 11533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 122165 - 122231
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| | |  |||||  |||||||| |||||||||||||||| |||||||||    
T  122165 gcgtctatttcttgaatatatgttctattcgcgtgttttatcgctttaatagaaatagggcgttaca 122231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 50 - 276
Target Start/End: Original strand, 7238 - 7463
Alignment:
Q  50 atgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcatgtatgcttttaaagtatatggtttat-atc 147  Q
    ||||||||||||||||| |||| |||| |||||||| ||||||  || | || | ||||| |||||||||||||   ||| ||||||||||||||| |||    
T  7238 atgtggagatttgccca-ttgttgggacttggagaa-ttttatattgatatatttttgatatcatggcatgtattgatttgaagtatatggtttataatc 7335  T
Q  148 cgctgcaactgttgaaattttttatacatgcatgttgttttggattttg-ttgatgatgtggcgtctatttcttgaatatttatattattcatgtgtttt 246  Q
    |||||| ||| |||| | ||| ||| |||||||||| |||||||||||| ||| ||| || ||||||||||||||||||| | ||||| ||  |||||||    
T  7336 cgctgcgactattgaga-tttatatgcatgcatgttattttggattttgtttgttgacgtagcgtctatttcttgaatatatttatta-tcgcgtgtttt 7433  T
Q  247 accgctttaatagaaataaggcgttacaca 276  Q
    | |||||||||||||||| |||||||||||    
T  7434 atcgctttaatagaaatagggcgttacaca 7463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 9229 - 9354
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||   |  |||||| | ||||||||| |||||| |||||||||||||||||    
T  9229 acatattgcatcactatttggaaaacaactaaattcaatcataaccagtttggattgtattatgagagttgcaccaaatgttcgaagacatcaatgtcaa 9328  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||| ||||||||||    
T  9329 atggtgctagctatatatgcacatgc 9354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 247943 - 248080
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    |||| ||||||| |||||| |||||||| |  ||||||| |||||||||||||  || |||||||| || || |||||||||||||||||||||||||||    
T  247943 tatgatttatattcgctgcgactgttgagaaattttatatatgcatgttgttt--gaatttgttgaagacgtagcgtctatttcttgaatatttatatta 248040  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||| ||||| ||| ||||||||||||| || || ||||||    
T  248041 ttcgtgtgtattatcgctttaatagaagtagggtgttaca 248080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 104 - 265
Target Start/End: Complemental strand, 4807 - 4646
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttata-tccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgat 201  Q
    ||||| |||||||||||||  |||| || |||||| |||||| || ||||| |||||||| |||||| ||||||||||||||||||||| ||||| ||||    
T  4807 ttgatatcatggcatgtata-ttttgaattatatgatttataatctgctgcgactgttgagattttt-atacatgcatgttgttttggaatttgtgtgat 4710  T
Q  202 gatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataa 265  Q
    || || ||||||||||||||||||| | ||||||||  |||||| | |||||||||||||||||    
T  4709 gacgtagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaataa 4646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 104 - 265
Target Start/End: Complemental strand, 3340 - 3179
Alignment:
Q  104 ttgatttcatggcatgtatgcttttaaagtatatggtttata-tccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgat 201  Q
    ||||| |||||||||||||  |||| || |||||| |||||| |||||||| |||||||| |||||| ||||||||||||||||||||| ||||| ||||    
T  3340 ttgatatcatggcatgtata-ttttgaattatatgatttataatccgctgcgactgttgagattttt-atacatgcatgttgttttggaatttgtgtgat 3243  T
Q  202 gatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataa 265  Q
    || |  ||||||||||||||||||| | ||||||||  |||||| | |||||||||||||||||    
T  3242 gacgaagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaataa 3179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 265
Target Start/End: Complemental strand, 16296 - 16163
Alignment:
Q  133 tatatggtttata-tccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttat 230  Q
    |||||| |||||| |||||||| |||||||| |||||| ||||||| ||||||||||||| ||||| |||||| || ||||||||||||||||||| | |    
T  16296 tatatgatttataatccgctgcgactgttgagattttt-atacatgtatgttgttttggaatttgtgtgatgacgtagcgtctatttcttgaatatatgt 16198  T
Q  231 attattcatgtgttttaccgctttaatagaaataa 265  Q
     ||||||  |||||| | |||||||||||||||||    
T  16197 tttattcgcgtgtttaatcgctttaatagaaataa 16163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 399
Target Start/End: Original strand, 49369 - 49494
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||| ||||||   || |||||| | ||||||| | |||||| |||||||||||||||||    
T  49369 acatattgcatcactatttggaaaacaactaaattcaatcataaacagtttggatggtattatgagagttgcatcaaatgttcgaagacatcaatgtcaa 49468  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||| ||||||||||||||||||||||    
T  49469 atgatgctagctatagatgcacatgc 49494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1949 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1949
Description:

Target: scaffold1949; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 167 - 274
Target Start/End: Complemental strand, 1199 - 1091
Alignment:
Q  167 ttttatacatgcatgttgttttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataa 265  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||||||| | ||||||||  |||||||| ||||||||| ||||||     
T  1199 ttttatacatgcatgttgttttggtttttgtatgatgatgtagcgtttatttcttgaatatatgtattattcgcgtgttttatcgctttaatggaaatag 1100  T
Q  266 ggcgttaca 274  Q
    |||||||||    
T  1099 ggcgttaca 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 61; Significance: 5e-26; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 53 - 226
Target Start/End: Complemental strand, 51424 - 51250
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgta-tcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgct 151  Q
    ||||||||| |||||||||||||| ||| |||||||||||| |  |||| | ||||| ||||| ||||||||| ||| |||||||||||||||||||| |    
T  51424 tggagatttacccatttgtcgggacttgaagaacttttatgtttatgtatttttgatatcatgacatgtatgc-tttgaagtatatggtttatatccgtt 51326  T
Q  152 gcaactgttgaaattttttatacatgcatgttg-ttttggattttgt-tgatgatgtggcgtctatttcttgaatat 226  Q
    || ||||| || | ||||||| |||||||||||  |||| ||||||| |||||| || |||||||||||||||||||    
T  51325 gcgactgtagaga-tttttatgcatgcatgttgaatttgaattttgtatgatgacgtagcgtctatttcttgaatat 51250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 7672 - 7607
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||| ||||||||   |||||||  | ||||||||||||| |||||||||    
T  7672 gcgtctatttcttgaatattt-tattattcgcatgttttattgttttaatagaaatagggcgttaca 7607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 274
Target Start/End: Complemental strand, 2510 - 2377
Alignment:
Q  141 ttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttg--atgatgtggcgtctatttcttgaatatttatattattca 238  Q
    ||||||||||||| |||||||| | |||| ||| ||||||||||||| | |||||| ||  | || || || |||||||||||||||  | | ||||||     
T  2510 ttatatccgctgcgactgttgagaatttt-atatatgcatgttgttt-gaattttgatgtgaagacgtagcatctatttcttgaataaatgttttattcg 2413  T
Q  239 tgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     |||| ||| |||||||||||||||| | |||||||    
T  2412 cgtgtattatcgctttaatagaaataggacgttaca 2377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 64 - 274
Target Start/End: Complemental strand, 7186 - 6976
Alignment:
Q  64 ccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggttt-atatccgctgcaactgttga 162  Q
    |||| |||||| |||||||||| || ||||||| ||||| ||||| | ||| |||||||  |||  |  |||||| ||| |||||| |||| ||||||||    
T  7186 ccatatgtcggaatttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatatatgatttcatatccactgcgactgttga 7087  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
    ||||||||||| ||||||||   ||||| ||||| ||| ||||| ||||||||||||||||||| |   ||||||  |||||||| ||||||||||||||    
T  7086 aattttttatatatgcatgtatgtttgg-ttttgctgaagatgtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaa 6988  T
Q  263 taaggcgttaca 274  Q
    || || ||||||    
T  6987 tagggtgttaca 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 274
Target Start/End: Complemental strand, 10385 - 10175
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| ||| ||||||||||||| ||| |||||| ||||| ||||| ||||||||||||  ||||  |  | |||| | |||||||||||| ||||||||    
T  10385 cccatatgttgggatttggagaa-tttaatgatgatgtattttgatctcatggcatgtagactttggagatgtatgatctatatccgctgcgactgttga 10287  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
     |  ||||||| |||||||||| ||| | |||||||||  | || || |||||||||||||||| |   ||||||  |||||||| ||||||||||||||    
T  10286 gaacttttatatatgcatgttgattttgtttttgttgaatacgtagcatctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaa 10187  T
Q  263 taaggcgttaca 274  Q
    || |||||||||    
T  10186 tatggcgttaca 10175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 63 - 272
Target Start/End: Original strand, 45653 - 45862
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| ||||| || ||| |||| || ||||||| | ||| ||||| ||||||||||||  |||| ||  | |||| |  |||||| |||| ||||||||    
T  45653 cccatatgtcgagacttgaagaatttatatgatgatttattttgatctcatggcatgtagactttgaagatgtatgatccatatcctctgcgactgttga 45752  T
Q  163 aattttttatacatgcatgttgttttggattt-tgttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
     | | |||||| |||||||||| ||||||||| ||||||||| || |||||||||| |||||||||||||||||||  |||||||| || ||||||| ||    
T  45753 gaatatttatatatgcatgttg-tttggatttatgttgatgacgtagcgtctattttttgaatatttatattattcgcgtgttttatcgttttaatataa 45851  T
Q  262 ataaggcgtta 272  Q
    |||||| ||||    
T  45852 ataaggtgtta 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 275
Target Start/End: Complemental strand, 6623 - 6463
Alignment:
Q  116 catgtatgcttttaaagtatatggtttatat--ccgctgcaactgttgaaattttttatacatgcatgttgttttggattttg-ttgatgatgtggcgtc 212  Q
    ||||||||||||| || |||||||| |||||  ||||||| |||||||| |||||  ||||||||||||||||||| |||||| ||||||| ||  ||||    
T  6623 catgtatgcttttgaattatatggtatatatatccgctgcgactgttgagatttt--atacatgcatgttgttttgaattttggttgatgacgtaacgtc 6526  T
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    || ||||||||||| | ||||||||  | |||| | ||||||||||||| || ||||||||||    
T  6525 taattcttgaatatatttattattcgcgagtttcatcgctttaatagaattagggcgttacac 6463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 274
Target Start/End: Complemental strand, 9704 - 9600
Alignment:
Q  171 atacatgcatgttgttttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcg 269  Q
    ||||| |||||||||||||||||||||| ||||| ||  | ||||||||||||||||||||||||||| |||||||||  |||||||| |||||| ||||    
T  9704 atacaagcatgttgttttggattttgtttgatgacgtatcatctatttcttgaatatttatattattcgtgtgttttattgctttaattgaaatagggcg 9605  T
Q  270 ttaca 274  Q
    |||||    
T  9604 ttaca 9600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 274
Target Start/End: Complemental strand, 19129 - 19025
Alignment:
Q  171 atacatgcatgttgttttggattttgtt-gatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcg 269  Q
    ||||| |||||||||||||||||||||| ||||| ||  | ||||||||||||||||||||||||||| |||||||||  |||||||| |||||| ||||    
T  19129 atacaagcatgttgttttggattttgtttgatgacgtatcatctatttcttgaatatttatattattcgtgtgttttattgctttaattgaaatagggcg 19030  T
Q  270 ttaca 274  Q
    |||||    
T  19029 ttaca 19025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 274
Target Start/End: Original strand, 24546 - 24712
Alignment:
Q  110 tcatggcatgtatgcttttaaagtatatggtttata-tccgctgcaactgttgaaattttttatacatgcatgttgttttggatttt--gttgatgatgt 206  Q
    ||||| ||||||||||||| || ||||||||||||| |||||||| |||| |||||||| | || |||||||||||||||| | |||  | |||||| ||    
T  24546 tcatgacatgtatgcttttgaattatatggtttataatccgctgcgactgatgaaatttat-atgcatgcatgttgttttgaaattttggctgatgacgt 24644  T
Q  207 ggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
     ||||||||||||||||||| | ||||||||  |||||  | ||||||||||||||||  ||||||||    
T  24645 agcgtctatttcttgaatatatgtattattcgcgtgttaaatcgctttaatagaaatagagcgttaca 24712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 18779 - 18667
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatg 114  Q
    |||||||||||||| ||| || |||| |||||    | ||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||     
T  18779 gattattctagattatttgttgtggacttattatgctttggagatttacccatttgtcgggatttggagaatttttatgatgatgtat-ttgatatcata 18681  T
Q  115 gcatgtatgctttt 128  Q
    ||||||||||||||    
T  18680 gcatgtatgctttt 18667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 12778 - 12938
Alignment:
Q  116 catgtatgcttttaaagtatatggtttata-tccgctgcaactgttgaaattttttatacatgcatgttgttttgga-ttttgtt-gatgatgtggcgtc 212  Q
    ||||||||||||| || ||||||||||||| |||||| |  ||||||| |||| | || |||||||||||||||| | ||||||| ||||| || |||||    
T  12778 catgtatgcttttgaattatatggtttataatccgctacgcctgttgagatttat-atgcatgcatgttgttttgaaattttgtttgatgacgtagcgtc 12876  T
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||| | ||||||||  ||| |||| |||||||||||||||| | |||||||    
T  12877 tatttcttgaatatatgtattattcgcgtgatttatcgctttaatagaaataggacgttaca 12938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 67 - 274
Target Start/End: Complemental strand, 33574 - 33367
Alignment:
Q  67 tttgtcgggatttggagaacttttatgatgttgtatctt-gatttcatggcatgtatgcttttaaagtatat-ggtttatatccgctgcaactgttgaaa 164  Q
    |||||||||| ||||||||| |||||| || ||||| || ||| |||||||||||||| ||  || |||| | |||||||||||||||| |||||||| |    
T  33574 tttgtcgggacttggagaacatttatgttgatgtatttttgatatcatggcatgtatggttcgaa-gtatcttggtttatatccgctgcgactgttgaga 33476  T
Q  165 ttttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaa 262  Q
    |||||   ||||||||||||  |||| ||||||| |||||| || | ||||||||||||||||| | | || |||  | |||||| ||||||||||||||    
T  33475 ttttt---acatgcatgttgaatttgaattttgtatgatgacgtagtgtctatttcttgaatatatgttttgttcgcgagttttatcgctttaatagaaa 33379  T
Q  263 taaggcgttaca 274  Q
    || |||||||||    
T  33378 tagggcgttaca 33367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 1286 - 1210
Alignment:
Q  198 tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||| || ||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  1286 tgatgacgtagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 1362 - 1293
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtat 122  Q
    ||||||||| |||| ||||||||| |||||||||||||||| || ||||| ||||| |||||||||||||    
T  1362 tggagatttacccacttgtcgggacttggagaacttttatgttgatgtattttgatatcatggcatgtat 1293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 264
Target Start/End: Complemental strand, 9420 - 9259
Alignment:
Q  110 tcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-------tttggattttgt-tgat 201  Q
    |||| |||||||||||||| || |||||||||||||||| |||| |||||||| |||||| || |||||||||||        |||| ||||| | ||||    
T  9420 tcatagcatgtatgcttttgaattatatggtttatatccactgcgactgttgagattttt-atgcatgcatgttgaatttgaatttgaattttctatgat 9322  T
Q  202 gatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
    || || ||||||||||||||||||| | ||||||||  |||||||| ||||||||||||||||    
T  9321 gacgtagcgtctatttcttgaatatatttattattcgcgtgttttatcgctttaatagaaata 9259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 264
Target Start/End: Original strand, 23181 - 23382
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| |||| | |||||||||| || ||||||| ||||| ||||| | ||| |||||||  |||  |  |||||| ||||||||| |||| ||||||||    
T  23181 cccatatgtcagaatttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatatatgatttatatccactgcgactgttga 23280  T
Q  163 aattttttatacatgcatgttgttttggattttgttgatgatgt-ggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
    ||||||||||| ||||||||   ||||| ||||| ||| || ||  ||||||||||||||||||| |   ||||||  |||||||| |||||||||||||    
T  23281 aattttttatatatgcatgtatgtttgg-ttttgctgaagacgtaagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaa 23379  T
Q  262 ata 264  Q
    |||    
T  23380 ata 23382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 399
Target Start/End: Complemental strand, 19329 - 19204
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaa 373  Q
    ||||| |||||||| ||| | ||| || |||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||    
T  19329 acatattgcatcaccatttggaaagcaactaaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaa 19230  T
Q  374 atggtgctagctatagatgcacatgc 399  Q
    ||||||||||||||||||||||||||    
T  19229 atggtgctagctatagatgcacatgc 19204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 3917 - 3854
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    |||||||||||||||||||| ||||||||| | ||||||| |||||||||||||||| |||||||    
T  3917 gcgtctatttcttgaatatt-atattattcgtatgttttatcgctttaatagaaatagggcgtta 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 12684 - 12748
Alignment:
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  12684 gtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 12748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 3035 - 3101
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||| |||||||||    
T  3035 gcgtctatttcttgaatatatgtattattcacgtgttttatcgctttaatagaaatagggcgttaca 3101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 11290 - 11356
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||| |||||||||    
T  11290 gcgtctatttcttgaatatatgtattattcacgtgttttatcgctttaatagaaatagggcgttaca 11356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 34364 - 34428
Alignment:
Q  210 gtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||||||||||||||  |||| ||| |||||||||||||||| |||||||||    
T  34364 gtctatttcttgaatatttatattattcgcgtgtattatcgctttaatagaaatagggcgttaca 34428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 399
Target Start/End: Original strand, 13134 - 13230
Alignment:
Q  303 taaattcaatcctaaccagtttatttgatattattacagttgcacctaatgtttgaagacatcaatgtcaaatggtgctagctatagatgcacatgc 399  Q
    ||||||||||| |||||| |||   | ||||||  | |||| |||| |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  13134 taaattcaatcttaaccaatttggataatattacgagagtttcaccaaatgttcgaagacatcattgtcaaatggtgctagctatagatgcacatgc 13230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 5708 - 5649
Alignment:
Q  213 tatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||    
T  5708 tatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgtta 5649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 5840 - 5708
Alignment:
Q  53 tggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctg 152  Q
    |||||||||||||| |||||||||||||||||| ||||||  ||   ||| || || ||||||||| ||| | ||| |  | |||| | | |||||||||    
T  5840 tggagatttgcccacttgtcgggatttggagaatttttatactgagatatttttatatcatggcatctatacctttgagatgtatgatatttatccgctg 5741  T
Q  153 caactgttgaaattttttatacatgcatgttgt 185  Q
    | |||||||  | |||||||||||| |||||||    
T  5740 cgactgttgggaatttttatacatgtatgttgt 5708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 1077 - 1011
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||||||||||| || |||||| |||||||| ||||||||||||| || ||||||||||    
T  1077 cgtctatttcttgaatatttgtaatattcacgtgttttatcgctttaatagaagtagggcgttacac 1011  T

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Target: scaffold0557 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 438 - 502
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||||||||| |||||||||  ||||||| ||||||||||||| || ||||||||||    
T  438 tctatttcttgaatatttctattattcacatgttttatcgctttaatagaattagggcgttacac 502  T

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Target: scaffold0601 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 3593 - 3660
Alignment:
Q  208 gcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    |||||||||||||||||| ||||||||||    ||||||| |||||||||||||||| ||||||||||    
T  3593 gcgtctatttcttgaataattatattattagcatgttttatcgctttaatagaaatagggcgttacac 3660  T

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Target: scaffold0258 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 8260 - 8197
Alignment:
Q  209 cgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgtta 272  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||||||| || |||||||    
T  8260 cgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgtta 8197  T

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Target: scaffold0112 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 4847 - 4784
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||| |||||    
T  4847 tctatttcttgaatatttatattattcgcgtgtattatcgctttaatagaaatagggcattaca 4784  T

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Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 264
Target Start/End: Original strand, 34976 - 35173
Alignment:
Q  69 tgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttgaaatttt 168  Q
    |||| ||||||| |||| |||||||||| ||||| ||||| ||||||||||| |  |||  |   |||||  |||||| |||||| | |||||| |||||    
T  34976 tgtcaggatttgaagaatttttatgatgatgtattttgatatcatggcatgtgtattttggagacatatgaattatattcgctgcgattgttgagatttt 35075  T
Q  169 -ttatacatgcatgttgttttggattttgttg--atgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaata 264  Q
     ||||| ||||||||||||| | |||||| ||  | || || ||||| ||||||||||||| |   |||||||||||| ||| ||||||||||||||||    
T  35076 cttatatatgcatgttgttt-gaattttgatgtgaagacgtagcgtccatttcttgaatatatgctttattcatgtgtattatcgctttaatagaaata 35173  T

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Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 107620 - 107478
Alignment:
Q  135 tatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatat 232  Q
    |||||||||||||| |||| ||||||||  ||||| || |||||||||||  |||| ||||||| |||||| || || |||||||||||||||  | |||    
T  107620 tatggtttatatccactgcgactgttgagcttttt-atgcatgcatgttgaatttgaattttgtatgatgacgtagcatctatttcttgaataaatgtat 107522  T
Q  233 tattcatgtgttttaccgctttaatagaaataaggcgttacaca 276  Q
    |||||   |||||||  ||||||||||||||| || ||||||||    
T  107521 tattcgcatgttttattgctttaatagaaatagggtgttacaca 107478  T

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Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 130029 - 129961
Alignment:
Q  15 gattattctagattgtttattttggatttatttacatgt-ggagatttgcccatttgtcgggatttgga 82  Q
    ||||| |||||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||||    
T  130029 gattactctagattctttattttggacttatttatgttttggagatttacccatttgtcgggatttgga 129961  T

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Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 15997 - 16137
Alignment:
Q  135 tatggtttatatccgctgcaactgttga--aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatttatat 232  Q
    |||| |||||||||||||| ||| ||||  || ||| |||| ||||||||||||||||| | |||||| || |   ||||||| ||||||||||||  ||    
T  15997 tatgttttatatccgctgcgacttttgaggaactttatatatatgcatgttgttttggaatctgttgaagacgaa-cgtctatgtcttgaatatttgcat 16095  T
Q  233 tattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||||  |||||||| ||||||||||||| || || ||||||    
T  16096 tattcgcgtgttttatcgctttaatagaagtagggtgttaca 16137  T

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Target: scaffold0205 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 4574 - 4448
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgctttt-aaagtatatggtttatatccgctgcaactgttg 161  Q
    ||||| ||||||||||||||||  || ||||  | ||||| |||||||||||||||||||  ||||  |||| |||| | |||||||||||| ||| |||    
T  4574 cccatatgtcgggatttggagattttatatggcgatgtatgttgatttcatggcatgtatatttttggaagtgtatgttatatatccgctgcgactattg 4475  T
Q  162 a-aattttttatacatgcatgttgttt 187  Q
    | || |||||||| |||||||||||||    
T  4474 agaaatttttatatatgcatgttgttt 4448  T

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Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 25343 - 25281
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttac 273  Q
    |||||||||||||||||| || ||||| ||||||||| ||||||||||||||||  |||||||    
T  25343 tctatttcttgaatatttgtaatattcgtgtgttttatcgctttaatagaaatagagcgttac 25281  T

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Target: scaffold0092 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 1316 - 1227
Alignment:
Q  186 tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||| ||||||| ||||||||| || ||||||||||||||| ||   ||||||   |||||||||||||||||||||||| |||||||||    
T  1316 tttgaattttgtatgatgatgtagcatctatttcttgaataattgccttattcgcatgttttaccgctttaatagaaatagggcgttaca 1227  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 64665 - 64729
Alignment:
Q  197 ttgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaa 261  Q
    |||| |||||| |||||||||||||||||||| ||||||||  ||||||||  ||||||||||||    
T  64665 ttgaagatgtgacgtctatttcttgaatatttgtattattcgggtgttttattgctttaatagaa 64729  T

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Target: scaffold0589 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 274
Target Start/End: Complemental strand, 5813 - 5675
Alignment:
Q  137 tggtttatatccgctgcaactgttgaaattttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatatta 234  Q
    ||||||||||| |||||  ||||||| |||| | || |||||||||||  |||| ||||||| |||||| || || |||||||||||||||  | |||||    
T  5813 tggtttatatctgctgcgtctgttgagatttat-atgcatgcatgttggatttgaattttgtatgatgacgtagcatctatttcttgaataaatgtatta 5715  T
Q  235 ttcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    |||   |||||||  |||||||||||||||||| ||||||    
T  5714 ttcgcatgttttattgctttaatagaaataaggtgttaca 5675  T

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Target: scaffold0331 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 11454 - 11291
Alignment:
Q  63 cccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaactgttga 162  Q
    ||||| ||||||||||||||| | |||| ||||| || || ||||| ||||||||||||| ||||  |  | |||| ||||||||||||||  || ||||    
T  11454 cccatatgtcgggatttggaggatttttgtgatgatgcatattgatctcatggcatgtatactttggagatgtatgatttatatccgctgcggctattga 11355  T
Q  163 -aattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctatttcttgaatatt 227  Q
      | |||||||| ||||||||||   ||   |||||||| || || ||||||||||||||||||||    
T  11354 ggaatttttatatatgcatgttg--atgttatttgttgaagacgtagcgtctatttcttgaatatt 11291  T

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Target: scaffold0177 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 21332 - 21442
Alignment:
Q  166 tttttatacatgcatgttgt-tttggattttgt-tgatgatgtggcgtctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaat 263  Q
    ||||||| |||||||| ||  |||| ||||||| |||||| || ||||||||||||||||||  |  |||||||  ||||||||||||||||||| ||||    
T  21332 tttttatgcatgcatgatggatttgaattttgtatgatgaagtagcgtctatttcttgaataaatgcattattcgcgtgttttaccgctttaataaaaat 21431  T
Q  264 aaggcgttaca 274  Q
    | | |||||||    
T  21432 aggccgttaca 21442  T

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Target: scaffold0347 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 3303 - 3256
Alignment:
Q  211 tctatttcttgaatatttatattattcatgtgttttaccgctttaata 258  Q
    |||||||||||||||||| ||||||||  |||||||| ||||||||||    
T  3303 tctatttcttgaatatttgtattattcgcgtgttttatcgctttaata 3256  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 43858 - 43795
Alignment:
Q  212 ctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttacac 275  Q
    ||||||||||||||||  ||||||||   |||||||  ||||||||||||||| ||||||||||    
T  43858 ctatttcttgaatattattattattcgcttgttttattgctttaatagaaatagggcgttacac 43795  T

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Target: scaffold0066; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 52028 - 51966
Alignment:
Q  212 ctatttcttgaatatttatattattcatgtgttttaccgctttaatagaaataaggcgttaca 274  Q
    ||||||||||||||||  ||||||||   |||||||  ||||||||||||||| |||||||||    
T  52028 ctatttcttgaatattattattattcgcatgttttattgctttaatagaaatagggcgttaca 51966  T

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Target: scaffold1884 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1884
Description:

Target: scaffold1884; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 1114 - 1164
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    ||||| |||||||||||| | |||||| |||||||||||| ||||||||||    
T  1114 acatattgcatcactatttggaaaacaactaaattcaatcataaccagttt 1164  T

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Target: scaffold0242 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 4407 - 4357
Alignment:
Q  274 acatactgcatcactattggaaaaacagctaaattcaatcctaaccagttt 324  Q
    ||||| |||||||||||| | |||||| |||||||||||||||| ||||||    
T  4407 acatattgcatcactatttggaaaacaactaaattcaatcctaatcagttt 4357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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